Pregenerated sensors for EPHB6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029869Ensembl transcript IDs: ENSMUST00000114732.3, ENSMUST00000167082.2, ENSMUST00000167497.2
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCACAGACTCCTaGGCAGGCTTTACACTTCCACTGAGCCTGGCTGCCTCAGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: PMARTGLGHRRLTDS*AGFTLPLSLAASGA Trigger: AGCACCTGAGGCAGCCAGGCTCAGTGGAAGTGTAAAGCCTGCTCAGGAGTCTGTGAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167497.2 |
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| 3UTR TCA 90 bp | GGCATCGGCGGCTCACAGACTCCTGAGCAGGCTTTACACTTCCACTaGGCCTGGCTGCCTCAGGTGCTGCTGGAGGAGCTGAATGTTGTG | + |
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Preference number: 1 (lower is better) Translates to: GIGGSQTPEQALHFH*AWLPQVLLEELNVV Trigger: CACAACATTCAGCTCCTCCAGCAGCACCTGAGGCAGCCAGGCTCAGTGGAAGTGTAAAGCCTGCTCAGGAGTCTGTGAGCCGCCGATGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167497.2 |
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| 3UTR GCA 90 bp | TGTGGCCAGGATACTGTGATGCTGTTGGCTGCCCGGCTCACCTGGTaGATCACAGGGACTGCAGAAGGGACTTCGTGGCTGGTGCTGACA | + |
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Preference number: 1 (lower is better) Translates to: CGQDTVMLLAARLTW*ITGTAEGTSWLVLT Trigger: TGTCAGCACCAGCCACGAAGTCCCTTCTGCAGTCCCTGTGATGCACCAGGTGAGCCGGGCAGCCAACAGCATCACAGTATCCTGGCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| 3UTR GCA 90 bp | ATTTGTTTGCTCAGGCTGTGGCCAGGATACTGTGATGCTGTTGGCTaGCCGGCTCACCTGGTGCATCACAGGGACTGCAGAAGGGACTTC | + |
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Preference number: 1 (lower is better) Translates to: ICLLRLWPGYCDAVG*PAHLVHHRDCRRDF Trigger: GAAGTCCCTTCTGCAGTCCCTGTGATGCACCAGGTGAGCCGGGCAGCCAACAGCATCACAGTATCCTGGCCACAGCCTGAGCAAACAAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| 3UTR TCA 90 bp | TACACTTCCACTGAGCCTGGCTGCCTCAGGTGCTGCTGGAGGAGCTaGATGTTGTGCAGAAGTTTCTTCTGGTGGCCAGCTAGGGTGATG | + |
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Preference number: 1 (lower is better) Translates to: YTSTEPGCLRCCWRS*MLCRSFFWWPARVM Trigger: CATCACCCTAGCTGGCCACCAGAAGAAACTTCTGCACAACATTCAGCTCCTCCAGCAGCACCTGAGGCAGCCAGGCTCAGTGGAAGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167497.2 |
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| 3UTR-3UTR GCA 90 bp | CACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCTCCACTGAGCCTGGCTaGCTCAGGTGCTGCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: HTPLLHPMARTGLGHRRLSTEPG*LRCCWR Trigger: CCTCCAGCAGCACCTGAGGCAGCCAGGCTCAGTGGA...GAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167497.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGGATACTGTGATGCTGTTGGCTGCCCGGCTCACCTGGTGCATCACAGGGGCAGAAGGGACTTCGTaGCTGGTGCTGACATTGATG | + |
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Preference number: 2 (lower is better) Translates to: GQDTVMLLAARLTWCITGAEGTS*LVLTLM Trigger: CATCAATGTCAGCACCAGCCACGAAGTCCCTTCTGC...CCCTGTGATGCACCAGGTGAGCCGGGCAGCCAACAGCATCACAGTATCCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| 3UTR-3UTR TCA 90 bp | TCGGCGGCTCACAGACTCCTGAGCAGGCTTTACACTTCCACTGAGCCTGGCTGCTGCTGCTGGAGGAGCTaGATGTTGTGCAGAAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: SAAHRLLSRLYTSTEPGCCCWRS*MLCRSF Trigger: GAAACTTCTGCACAACATTCAGCTCCTCCAGCAGCA...GCAGCCAGGCTCAGTGGAAGTGTAAAGCCTGCTCAGGAGTCTGTGAGCCGCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167497.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCATAGTAGCGCAGCTGGTAGTCGAGGATGTTCCCATTTGTTTGCTCAGGCTGACATTGATGGCTGCTaGCTGGGGAGGGTCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: GHSSAAGSRGCSHLFAQADIDGC*LGRVRA Trigger: AGCCCTGACCCTCCCCAGGCAGCAGCCATCAATGTC...AGCCTGAGCAAACAAATGGGAACATCCTCGACTACCAGCTGCGCTACTATGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTGCCTGGTCATAGTAGCGCAGCTGGTAGTCGAGGATGTTCCCATTTGTTTGGCTGACATTGATGGCTaGTGCCTGGGGAGGGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: FCLVIVAQLVVEDVPICLADIDG*CLGRVR Trigger: CCTGACCCTCCCCAGGCAGCAGCCATCAATGTCAGC...CAAACAAATGGGAACATCCTCGACTACCAGCTGCGCTACTATGACCAGGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCTGGTCATAGTAGCGCAGCTGGTAGTCGAGGATGTTCCCATTTGTTTGCTCGCTCAGACACCCCATTaGCAGCCTGCACTTCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: CLVIVAQLVVEDVPICLLAQTPH*QPALPR Trigger: TCTTGGAAGTGCAGGCTGTCAATGGGGTGTCTGAGC...GAGCAAACAAATGGGAACATCCTCGACTACCAGCTGCGCTACTATGACCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| 3UTR-3UTR GCA 90 bp | GTCATAGTAGCGCAGCTGGTAGTCGAGGATGTTCCCATTTGTTTGCTCAGGCTGGTGCATCACAGGGACTaGAGAAGGGACTTCGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: VIVAQLVVEDVPICLLRLVHHRD*RRDFVA Trigger: AGCCACGAAGTCCCTTCTGCAGTCCCTGTGATGCAC...CAGCCTGAGCAAACAAATGGGAACATCCTCGACTACCAGCTGCGCTACTATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATTTGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAATATGGGGGAGGCTGTTaGAAGAGCAGGATTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: RIWGCNVQRAGFNVTGMEYGGGC*KSRIWG Trigger: CCCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATA...TTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000114732.3 ENSMUST00000167497.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATTTGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAAGAAGTTTCTTCTGGTaGCCAGCTAGGGTGATGCCC | + |
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Preference number: 2 (lower is better) Translates to: RIWGCNVQRAGFNVTGMERSFFW*PARVMP Trigger: GGGCATCACCCTAGCTGGCCACCAGAAGAAACTTCT...TTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167497.2 |
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| 3UTR-3UTR TCA 90 bp | AAATTCCCTTCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGCTTTACACTTCCACTaGGCCTGGCTGCCTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: KFPSFPLIWGRLLEEQDLALHFH*AWLPQV Trigger: CACCTGAGGCAGCCAGGCTCAGTGGAAGTGTAAAGC...CAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGAAGGGAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167497.2 |
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| 3UTR CCA 72 bp | ACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTaGGGCATCGGCGGCTCACAGACTCCTGAGCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: TRPFSTLWPGLG*GIGGSQTPEQA Trigger: AGCCTGCTCAGGAGTCTGTGAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114732.3 ENSMUST00000167497.2 |
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| 3UTR CCA 72 bp | GTCTCACACGCCCCTTCTCCACCCTATGGCCAGGACTaGGTTGGGGCATCGGCGGCTCACAGACTCCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: VSHAPSPPYGQD*VGASAAHRLLS Trigger: GCTCAGGAGTCTGTGAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114732.3 ENSMUST00000167497.2 |
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| 3UTR TCA 72 bp | AGGACTGGGTTGGGGCATCGGCGGCTCACAGACTCCTaGGCAGGCTTTACACTTCCACTGAGCCTGGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: RTGLGHRRLTDS*AGFTLPLSLAA Trigger: GGCAGCCAGGCTCAGTGGAAGTGTAAAGCCTGCTCAGGAGTCTGTGAGCCGCCGATGCCCCAACCCAGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167497.2 |
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| 3UTR-3UTR CAA 90 bp | GTGACAGGCATGGAAGCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTATGGCCAGGACTGGGTaGGGGCATCGGCGGCTCACA | + |
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Preference number: 3 (lower is better) Translates to: VTGMEAGVEPDSVSHAPSMARTG*GHRRLT Trigger: TGTGAGCCGCCGATGCCCCAACCCAGTCCTGGCCAT...AGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGCTTCCATGCCTGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114732.3 ENSMUST00000167497.2 |
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| 3UTR GCA 72 bp | CTCAGGCTGTGGCCAGGATACTGTGATGCTGTTGGCTaGCCGGCTCACCTGGTGCATCACAGGGACTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: LRLWPGYCDAVG*PAHLVHHRDCR Trigger: TCTGCAGTCCCTGTGATGCACCAGGTGAGCCGGGCAGCCAACAGCATCACAGTATCCTGGCCACAGCCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| 3UTR GCA 72 bp | GGGTCAGGGCTGAGCTCAGACACCCCATTGACAGCCTaGACTTCCAAGATGTATGGCACGTGTGCTCGGAGC | + |
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Preference number: 3 (lower is better) Translates to: GSGLSSDTPLTA*TSKMYGTCARS Trigger: GCTCCGAGCACACGTGCCATACATCTTGGAAGTGCAGGCTGTCAATGGGGTGTCTGAGCTCAGCCCTGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| 3UTR GCA 72 bp | GTTGGCTGCCCGGCTCACCTGGTGCATCACAGGGACTaGAGAAGGGACTTCGTGGCTGGTGCTGACATTGAT | + |
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Preference number: 3 (lower is better) Translates to: VGCPAHLVHHRD*RRDFVAGADID Trigger: ATCAATGTCAGCACCAGCCACGAAGTCCCTTCTGCAGTCCCTGTGATGCACCAGGTGAGCCGGGCAGCCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTGGAAGAGCAGGATTTGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGATGGCCAGGACTGGGTaGGGGCATCGGCGGCTCACA | + |
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Preference number: 3 (lower is better) Translates to: CWKSRIWGCNVQRAGFNVMARTG*GHRRLT Trigger: TGTGAGCCGCCGATGCCCCAACCCAGTCCTGGCCAT...CACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCTGCTCTTCCAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114732.3 ENSMUST00000167497.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCCTGGTCATAGTAGCGCAGCTGGTAGTCGAGGATGTTCCCATTTGTTTGCTGATACTGTGATGCTGTaGGCTGCCCGGCTCACCTGG | + |
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Preference number: 3 (lower is better) Translates to: LPGHSSAAGSRGCSHLFADTVML*AARLTW Trigger: CCAGGTGAGCCGGGCAGCCAACAGCATCACAGTATC...AGCAAACAAATGGGAACATCCTCGACTACCAGCTGCGCTACTATGACCAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCTGGTCATAGTAGCGCAGCTGGTAGTCGAGGATGTTCCCATTTGTTTGCTCAGCTCAGACACCCCATaGACAGCCTGCACTTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: CLVIVAQLVVEDVPICLLSSDTP*TACTSK Trigger: CTTGGAAGTGCAGGCTGTCAATGGGGTGTCTGAGCT...GAGCAAACAAATGGGAACATCCTCGACTACCAGCTGCGCTACTATGACCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| 3UTR-3UTR CAA 90 bp | AAATTCCCTTCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGATATGGGGGAGGCTGTaGGAAGAGCAGGATTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: KFPSFPLIWGRLLEEQDLIWGRL*EEQDLG Trigger: CCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATAT...CAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGAAGGGAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000114732.3 ENSMUST00000167497.2 |
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| CDS-3UTR GCA 90 bp | CTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCGCAGCCACACCCCGCTaGATGGCCACCAGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LTRPFSTLWPGLGWGIGGAATPR*MATSCR Trigger: CCTGCAGCTGGTGGCCATGCAGCGGGGTGTGGCTGC...GCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR CCA 90 bp | CACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCGCTGCCCGGCTCACCTaGTGCATCACAGGGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: HTPLLHPMARTGLGHRRLAARLT*CITGTA Trigger: TGCAGTCCCTGTGATGCACCAGGTGAGCCGGGCAGC...GAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR GCA 90 bp | CACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCGCTGACATTGATGGCTaGTGCCTGGGGAGGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: HTPLLHPMARTGLGHRRLADIDG*CLGRVR Trigger: CCTGACCCTCCCCAGGCAGCAGCCATCAATGTCAGC...GAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR GCA 90 bp | CACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCCTGGCCCAGCAGTGCTaGCCGACCCAGAAAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: HTPLLHPMARTGLGHRRLLAQQC*PTQKGH Trigger: ATGACCTTTCTGGGTCGGGCAGCACTGCTGGGCCAG...GAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR CCA 90 bp | ACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCACAGACTCCTGAGCAGTCTCCACGAGCAGGCTaGTGTCCAGGCTGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: TLWPGLGWGIGGSQTPEQSPRAG*CPGWQR Trigger: CCGCTGCCAGCCTGGACACCAGCCTGCTCGTGGAGA...CTGCTCAGGAGTCTGTGAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR CCA 90 bp | ACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCATTGGGGTGCTGGAACTaGCCCAGCAGTGCTGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: TRPFSTLWPGLGWGIGGSLGCWN*PSSAAR Trigger: TCGGGCAGCACTGCTGGGCCAGTTCCAGCACCCCAA...TGAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR TCA 90 bp | GTTTGCTCAGGCTGTGGCCAGGATACTGTGATGCTGTTGGCTGCCCGGCTCACCCGTCCACCCAGCTCCTaGGGCAGACGCCAGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VCSGCGQDTVMLLAARLTRPPSS*GRRQCS Trigger: GCTGCACTGGCGTCTGCCTCAGGAGCTGGGTGGACG...GGTGAGCCGGGCAGCCAACAGCATCACAGTATCCTGGCCACAGCCTGAGCAAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| CDS-3UTR TCA 90 bp | TCTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCGAGCAAGCTCTCTaGTGGCCTGGCAGGGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SHTPLLHPMARTGLGHRRLEQAL*WPGRGH Trigger: ATGACCCCTGCCAGGCCATCAGAGAGCTTGCTCGAG...CCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR GCA 90 bp | TTGGCTGCCCGGCTCACCTGGTGCATCACAGGGACTGCAGAAGGGACTTCGTGGTGGCGGGGGTCGAAATaGACCTCGTCCCTGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LAARLTWCITGTAEGTSWWRGSK*TSSLQR Trigger: CCGCTGCAGGGACGAGGTGCATTTCGACCCCCGCCA...CCACGAAGTCCCTTCTGCAGTCCCTGTGATGCACCAGGTGAGCCGGGCAGCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| CDS-3UTR CCA 90 bp | TTGGCTGCCCGGCTCACCTGGTGCATCACAGGGACTGCAGAAGGGACTTCGTGGTCTCCACGAGCAGGCTaGTGTCCAGGCTGGCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LAARLTWCITGTAEGTSWSPRAG*CPGWQR Trigger: CCGCTGCCAGCCTGGACACCAGCCTGCTCGTGGAGA...CCACGAAGTCCCTTCTGCAGTCCCTGTGATGCACCAGGTGAGCCGGGCAGCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| CDS-3UTR TCA 90 bp | ACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCACTTTGGTCCAGCGTTTaGGGTGCCAGGCCGCAATAC | + |
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Preference number: 4 (lower is better) Translates to: TRPFSTLWPGLGWGIGGSLWSSV*GARPQY Trigger: GTATTGCGGCCTGGCACCTCAAACGCTGGACCAAAG...TGAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR TCA 90 bp | TCTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGTGTAGGAGAAGAGCTTaGCTGCCACAAGGGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SHTPLLHPMARTGLGHRRCRRRA*LPQGPG Trigger: GCCTGGCCCTTGTGGCAGTCAAGCTCTTCTCCTACA...CCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR TCA 90 bp | CTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTACTCCAGGCTGAGCTaGGCCACATCACTGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LTRPFSTLWPGLGWGIGGYSRLS*ATSLKV Trigger: CACCTTCAGTGATGTGGCTCAGCTCAGCCTGGAGTA...GCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167497.2 |
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| CDS-3UTR GCA 90 bp | ACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCACAGACTCCTGAGCAGGGAGAAGAGCTTGACTaGCACAAGGGCCAGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: TLWPGLGWGIGGSQTPEQGEELD*HKGQAG Trigger: GCCTGCCTGGCCCTTGTGGCAGTCAAGCTCTTCTCC...CTGCTCAGGAGTCTGTGAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR GCA 90 bp | GGCCAGGATACTGTGATGCTGTTGGCTGCCCGGCTCACCTGGTGCATCACAGGGCCGATGGAGGACCAGTaGAGGGAGCCTCTGGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: GQDTVMLLAARLTWCITGPMEDQ*REPLVG Trigger: ACCCACCAGAGGCTCCCTGCACTGGTCCTCCATCGG...CCCTGTGATGCACCAGGTGAGCCGGGCAGCCAACAGCATCACAGTATCCTGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| CDS-3UTR GCA 90 bp | TCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCACAGACTCCTGGCCCGGCTCACCTGGTaGATCACAGGGACTGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SPPYGQDWVGASAAHRLLARLTW*ITGTAE Trigger: TTCTGCAGTCCCTGTGATGCACCAGGTGAGCCGGGC...CAGGAGTCTGTGAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR GCA 90 bp | TCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCACAGACTCCTGTGCATGGCCACCAGCTaGAGGCTACTGAACTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SPPYGQDWVGASAAHRLLCMATS*RLLNWP Trigger: GGGCCAGTTCAGTAGCCTGCAGCTGGTGGCCATGCA...CAGGAGTCTGTGAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR CCA 90 bp | TCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCACAGACTCCTGGAGACATGGGCAAACTaGGGCTGCAGGGTCAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SPPYGQDWVGASAAHRLLETWAN*GCRVRG Trigger: TCCCCTGACCCTGCAGCCCCAGTTTGCCCATGTCTC...CAGGAGTCTGTGAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR TCA 90 bp | GTCTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCAGACACCCCATTaGCAGCCTGCACTTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: VSHAPSPPYGQDWVGASAAQTPH*QPALPR Trigger: TCTTGGAAGTGCAGGCTGTCAATGGGGTGTCTGAGC...CGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR TCA 90 bp | GGCATGGAAGCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTCCACCCGTGGCCAGGATACTGTaGTGCTGTTGGCTGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: GMEAGVEPDSVSHAPSPPVARIL*CCWLPG Trigger: GCCGGGCAGCCAACAGCATCACAGTATCCTGGCCAC...GGGTGGAGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGCTTCCATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR GCA 90 bp | GTGACAGGCATGGAAGCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTGTGAAGGCGGATGTGTaGCCTCTGGGCCCCTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VTGMEAGVEPDSVSHAPSVKADV*PLGPSP Trigger: CGGCGAGGGGCCCAGAGGGCACACATCCGCCTTCAC...AGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGCTTCCATGCCTGTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | GTCTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGAATGACCTCTGGGGCTaGCCAGCGAAGCAAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VSHAPSPPYGQDWVGASANDLWG*PAKQGT Trigger: AGTTCCTTGCTTCGCTGGGCAGCCCCAGAGGTCATT...CGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTCCACCCTATGGCCAGTCCACTGAGCCTGGCTaGCTCAGGTGCTGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGVEPDSVSHAPSPPYGQSTEPG*LRCCWR Trigger: CCTCCAGCAGCACCTGAGGCAGCCAGGCTCAGTGGA...CTGGCCATAGGGTGGAGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | ACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCACAGACTCCTGAGCAGCCCCTCCAGCTCCACTaGCCTGTGTCTCAGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLWPGLGWGIGGSQTPEQPLQLH*PVSQEK Trigger: CTTTTCCTGAGACACAGGCCAGTGGAGCTGGAGGGG...CTGCTCAGGAGTCTGTGAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | TCTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCCAAGGCCCCCAGGATaGAACCAATCACCAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SHTPLLHPMARTGLGHRRPRPPG*NQSPRT Trigger: TGTCCTTGGTGATTGGTTCCATCCTGGGGGCCTTGG...CCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | GTCTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGAGGATATTGGGGTGCTaGAACTGGCCCAGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSHAPSPPYGQDWVGASARILGC*NWPSSA Trigger: AGCACTGCTGGGCCAGTTCCAGCACCCCAATATCCT...CGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | ACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCACAGACTCCTGAGCAGTGGACAAGTACTGCATaGCAGCAGCCACACCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLWPGLGWGIGGSQTPEQWTSTA*QQPHPA Trigger: AGCGGGGTGTGGCTGCTGCCATGCAGTACTTGTCCA...CTGCTCAGGAGTCTGTGAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR TCA 90 bp | GAAGCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTCCACCCTATGGCGACGCCAGTGCAGCATaGGTGCCGAGCCTTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: EAGVEPDSVSHAPSPPYGDASAA*VPSLAP Trigger: AGGTGCAAGGCTCGGCACTCATGCTGCACTGGCGTC...GCCATAGGGTGGAGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTCCACCCTATGGCCAGGACATTGATGGCTGCTaGCTGGGGAGGGTCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGVEPDSVSHAPSPPYGQDIDGC*LGRVRA Trigger: AGCCCTGACCCTCCCCAGGCAGCAGCCATCAATGTC...CTGGCCATAGGGTGGAGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | TGTTGGAAGAGCAGGATTTGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGGGGGCCGTGGCCAGCTaGAGTCCGTGCCCGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: CWKSRIWGCNVQRAGFNVGAVAS*SPCPHL Trigger: CAGGTGCGGGCACGGACTGCAGCTGGCCACGGCCCC...CACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCTGCTCTTCCAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | CCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCACAGACTCCTGAGCGCAGAAGGGACTTCGTaGCTGGTGCTGACATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PPYGQDWVGASAAHRLLSAEGTS*LVLTLM Trigger: CATCAATGTCAGCACCAGCCACGAAGTCCCTTCTGC...GCTCAGGAGTCTGTGAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | ACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCACAGACTCCTGAGCAGCAAGGACAGCTTCTCTaGAAGCTGGGAGGACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLWPGLGWGIGGSQTPEQQGQLL*KLGGQL Trigger: GAGCTGTCCTCCCAGCTTCCAGAGAAGCTGTCCTTG...CTGCTCAGGAGTCTGTGAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR TCA 90 bp | GTGACAGGCATGGAAGCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTCACCTGGCGGGTAGGTaGGCCAGCCAATCTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTGMEAGVEPDSVSHAPSHLAGR*ASQSQR Trigger: CCTCTGAGATTGGCTGGCTCACCTACCCGCCAGGTG...AGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGCTTCCATGCCTGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR TCA 90 bp | ACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTCAGCTGAGCCACATCACTaGAGGTGGAAAGACCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: TRPFSTLWPGLGWGIGGSAEPHH*RWKDQT Trigger: AGTTTGGTCTTTCCACCTTCAGTGATGTGGCTCAGC...TGAGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114732.3 ENSMUST00000167497.2 |
||
| CDS-3UTR TCA 90 bp | GTCTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGTGCTGCTGGAGGAGCTaGATGTTGTGCAGAAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSHAPSPPYGQDWVGASACCWRS*MLCRSF Trigger: GAAACTTCTGCACAACATTCAGCTCCTCCAGCAGCA...CGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | GGCATGGAAGCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTCCACCCGTCCAGCGTTTGAGGTaGCAGGCCGCAATACTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GMEAGVEPDSVSHAPSPPVQRLR*QAAILS Trigger: CGACAGTATTGCGGCCTGGCACCTCAAACGCTGGAC...GGGTGGAGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGCTTCCATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | TGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGCTGGAGGTCAGGGGAGTGGCTaGGGGCTGGACACGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WGCNVQRAGFNVTGMEAGGQGSG*GLDTVN Trigger: GTTCACCGTGTCCAGCCCGCAGCCACTCCCCTGACC...TCCAGCTTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATTGCACCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | GTGACAGGCATGGAAGCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTTGGGCAAACTGGGGCTaGAGGGTCAGGGGAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTGMEAGVEPDSVSHAPSWANWG*RVRGVA Trigger: AGCCACTCCCCTGACCCTGCAGCCCCAGTTTGCCCA...AGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGCTTCCATGCCTGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | GTGACAGGCATGGAAGCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTCCGATGGAGGACCAGTaGAGGGAGCCTCTGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTGMEAGVEPDSVSHAPSPMEDQ*REPLVG Trigger: ACCCACCAGAGGCTCCCTGCACTGGTCCTCCATCGG...AGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGCTTCCATGCCTGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | GAGCCTGACTCAGTCTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTACTGTGGCCGAGACGTaGCACCTTACACACCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EPDSVSHAPSPPYGQDWVTVAET*HLTHQV Trigger: CACCTGGTGTGTAAGGTGGCACGTCTCGGCCACAGT...AACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAGACTGAGTCAGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | GGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGCTGGAGTAGGGGCACCCTGGAGGTaGGGGCAGCCGGAACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GCNVQRAGFNVTGMEAGVGAPWR*GQPELL Trigger: CAAGAGTTCCGGCTGCCCCCACCTCCAGGGTGCCCC...TACTCCAGCTTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATTGCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | GTCTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGTGCAGAAGTTTCTTCTaGTGGCCAGCTAGGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VSHAPSPPYGQDWVGASACRSFF*WPARVM Trigger: CATCACCCTAGCTGGCCACCAGAAGAAACTTCTGCA...CGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| 3UTR CAA 72 bp | GTTTGCTCAGGCTGTGGCCAGGATACTGTGATGCTGTaGGCTGCCCGGCTCACCTGGTGCATCACAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: VCSGCGQDTVML*AARLTWCITGT Trigger: AGTCCCTGTGATGCACCAGGTGAGCCGGGCAGCCAACAGCATCACAGTATCCTGGCCACAGCCTGAGCAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGGTGCAATGCAGTCCCACCCGCTaGCCGGTCCTGTGGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFPLIWGRLLEEQDLGVQCSPTR*PVLWGP Trigger: GGGACCCCACAGGACCGGTCAGCGGGTGGGACTGCA...TTGCACCCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR TCA 90 bp | TCTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGTCTCACTGGTCATGGTaGAGGAGTGGGATTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHTPLLHPMARTGLGHRRSHWSW*RSGIHL Trigger: AAGATGAATCCCACTCCTTCACCATGACCAGTGAGA...CCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | GAGCCTGACTCAGTCTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTCCAGTGCAGCATGAGTaGCGAGCCTTGCACCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EPDSVSHAPSPPYGQDWVPVQHE*RALHLK Trigger: TTTGAGGTGCAAGGCTCGGCACTCATGCTGCACTGG...AACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAGACTGAGTCAGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | AGCCTGACTCAGTCTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGTGCATCACAGGGACTaGAGAAGGGACTTCGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLTQSHTPLLHPMARTGLVHHRD*RRDFVA Trigger: AGCCACGAAGTCCCTTCTGCAGTCCCTGTGATGCAC...CAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAGACTGAGTCAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | TGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGCTGGAGCCAGCTGCAGTCCGTaGCCGCACCTGGAAGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: WGCNVQRAGFNVTGMEAGASCSP*PHLEAI Trigger: TATGGCTTCCAGGTGCGGGCACGGACTGCAGCTGGC...TCCAGCTTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATTGCACCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | GTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGCTGGAGTAGAGCCTGACGCTCTCAGCACCCCCTaGCCACAAGGCCTGGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: VQRAGFNVTGMEAGVEPDALSTP*PQGLDS Trigger: GCTATCCAGGCCTTGTGGGCAGGGGGTGCTGAGAGC...GTCAGGCTCTACTCCAGCTTCCATGCCTGTCACATTAAACCCAGCCCTCTGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | AGGATTTGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAACTCCCGGGGAGCCGATaGAGGACCAGTGCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RIWGCNVQRAGFNVTGMELPGSR*RTSAGS Trigger: GCTCCCTGCACTGGTCCTCCATCGGCTCCCCGGGAG...TTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | GAGCTCAGACACCCCATTGACAGCCTGCACTTCCAAGATGTATGGCACGTGTGCGCAGGGAGCCTCTGGTaGGTCCGAACTTGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELRHPIDSLHFQDVWHVCAGSLW*VRTWQS Trigger: GCTCTGCCAAGTTCGGACCCACCAGAGGCTCCCTGC...GCACACGTGCCATACATCTTGGAAGTGCAGGCTGTCAATGGGGTGTCTGAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGGATTTGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGCACCACTCTGCTCCCTaGGCCAGTCGTGCCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRIWGCNVQRAGFNVTGMHHSAP*ASRALS Trigger: ACTGAGGGCACGACTGGCTCAGGGAGCAGAGTGGTG...CATGCCTGTCACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR TCA 90 bp | TTCCCTTCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGCGTCCACCCAGCTCCTaGGGCAGACGCCAGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPSFPLIWGRLLEEQDLGRPPSS*GRRQCS Trigger: GCTGCACTGGCGTCTGCCTCAGGAGCTGGGTGGACG...CCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGAAGGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR TCA 90 bp | AATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGCTGGAGTAGAGCCTCCAGCTGCAGGCTACTaGACTGGCCCTCTCGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NVQRAGFNVTGMEAGVEPPAAGY*TGPLAA Trigger: GGCAGCGAGAGGGCCAGTTCAGTAGCCTGCAGCTGG...AGGCTCTACTCCAGCTTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR TCA 90 bp | GTGACAGGCATGGAAGCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTGCCGAGAGTGCTCGGTaGACAAAGGCAAAGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VTGMEAGVEPDSVSHAPSAESAR*TKAKLD Trigger: GTCCAGCTTTGCCTTTGTTCACCGAGCACTCTCGGC...AGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGCTTCCATGCCTGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | TGTTGGAAGAGCAGGATTTGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGTGGCGGGGGTCGAAATaGACCTCGTCCCTGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CWKSRIWGCNVQRAGFNVWRGSK*TSSLQR Trigger: CCGCTGCAGGGACGAGGTGCATTTCGACCCCCGCCA...CACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCTGCTCTTCCAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | TTCTGCCTGGTCATAGTAGCGCAGCTGGTAGTCGAGGATGTTCCCATTTGTTTGCTCCCGGGGAGCCGATaGAGGACCAGTGCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCLVIVAQLVVEDVPICLLPGSR*RTSAGS Trigger: GCTCCCTGCACTGGTCCTCCATCGGCTCCCCGGGAG...CAAACAAATGGGAACATCCTCGACTACCAGCTGCGCTACTATGACCAGGCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
||
| CDS-3UTR TCA 90 bp | AGGATTTGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGGGTCCCACAGCCCATaGGGAAGAGGAAGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RIWGCNVQRAGFNVTGMEGSHSP*GRGRGG Trigger: GCCTCCTCTTCCTCTTCCTCATGGGCTGTGGGACCC...TTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | TTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGGTGCAATGTGCCCGCCACCACTCTaGTCCCTGAGCCAGTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPFNMGEAVGRAGFGGAMCPPPL*SLSQSC Trigger: GCACGACTGGCTCAGGGAGCAGAGTGGTGGCGGGCA...CATTGCACCCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | AATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGCTGGAGTAGAGCCTCCAGGAGCCACAGACTaGACACCATGCCCGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NVQRAGFNVTGMEAGVEPPGATD*TPCPPP Trigger: TGGTGGCGGGCATGGTGTGCAGTCTGTGGCTCCTGG...AGGCTCTACTCCAGCTTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | CTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCAATCATCTTGTCAAATaGAGCTACCAGCTGGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTRPFSTLWPGLGWGIGGNHLVK*SYQLVK Trigger: TTTGACCAGCTGGTAGCTGCATTTGACAAGATGATT...GCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | TCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTGGAGAGTATCAGGCTTaGGAATCATCTTGTCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: SHAPSPPYGQDWVGASAAGEYQA*ESSCQM Trigger: CATTTGACAAGATGATTCGCAAGCCTGATACTCTCC...AGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | TTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGGTGCAATGCTCATCCCACCCACCTaGCGGGTAGGTGAGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FPFNMGEAVGRAGFGGAMLIPPT*RVGEPA Trigger: GGCTGGCTCACCTACCCGCCAGGTGGGTGGGATGAG...CATTGCACCCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | TGGAAGAGCAGGATTTGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGTGATGCCCAGGCCTaGCAGGTCTTCCAGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WKSRIWGCNVQRAGFNVTGDAQA*QVFQAE Trigger: CTCAGCCTGGAAGACCTGCCAGGCCTGGGCATCACC...TGTCACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCTGCTCTTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR TCA 90 bp | GTGACAGGCATGGAAGCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTCAAAGCTGCGCTCTTTaGCATTCAGCTGCAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTGMEAGVEPDSVSHAPSQSCAL*HSAAVP Trigger: TGGGACTGCAGCTGAATGTCAAAGAGCGCAGCTTTG...AGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGCTTCCATGCCTGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR TCA 90 bp | TTCTGCCTGGTCATAGTAGCGCAGCTGGTAGTCGAGGATGTTCCCATTTGTTTGGACGCCAGTGCAGCATaGGTGCCGAGCCTTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FCLVIVAQLVVEDVPICLDASAA*VPSLAP Trigger: AGGTGCAAGGCTCGGCACTCATGCTGCACTGGCGTC...CAAACAAATGGGAACATCCTCGACTACCAGCTGCGCTACTATGACCAGGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCTTCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGACCAGCTGGTCAAAATaGGGCCGACGGGCACGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPSFPLIWGRLLEEQDLGTSWSK*GRRARS Trigger: GGACCGTGCCCGTCGGCCTCATTTTGACCAGCTGGT...CCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGAAGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | GAAGCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTCCACCCTATGGCACCCCATTGACAGCCTaGACTTCCAAGATGTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: EAGVEPDSVSHAPSPPYGTPLTA*TSKMYG Trigger: GCCATACATCTTGGAAGTGCAGGCTGTCAATGGGGT...GCCATAGGGTGGAGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTCCACCCTATGGCCAGCTCCAAGTCCTGGGCTaGTGTATTGTTGCAGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGVEPDSVSHAPSPPYGQLQVLG*CIVAVV Trigger: AACAACTGCAACAATACAGCAGCCCAGGACTTGGAG...CTGGCCATAGGGTGGAGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR CCA 90 bp | GGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGCTGGAGTAGAGCCCCCTTCAGCCTaGAGAGTATCAGGCTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GCNVQRAGFNVTGMEAGVEPPSA*RVSGLR Trigger: TCGCAAGCCTGATACTCTCCAGGCTGAAGGGGGCTC...TACTCCAGCTTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATTGCACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR TCA 90 bp | TGGAAGAGCAGGATTTGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGCCGGTAGTAAAGGGTaGAGGTCTCTCGGCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WKSRIWGCNVQRAGFNVTAGSKG*RSLGRY Trigger: GTACCTGCCGAGAGACCTTCACCCTTTACTACCGGC...TGTCACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCTGCTCTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | GGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGCTGGAGTACATGAGCTACACAGGTaGCCACAGCTGCCACTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCNVQRAGFNVTGMEAGVHELHR*PQLPLR Trigger: CCTTAGTGGCAGCTGTGGGCACCTGTGTAGCTCATG...TACTCCAGCTTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATTGCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR CCA 90 bp | ATGGAAGCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTCCACCCTATCAGAGGTCTCTCCTGTaGTATCCAGCAGCACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MEAGVEPDSVSHAPSPPYQRSLL*YPAAPL Trigger: AAGAGGTGCTGCTGGATACCACAGGAGAGACCTCTG...ATAGGGTGGAGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGCTTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | TCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGGTGCAACCCTCAGGGCAGGCTTaGCAGAGCTTGTCTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SFPLIWGRLLEEQDLGVQPSGQA*QSLSPR Trigger: TCGTGGAGACAAGCTCTGCCAAGCCTGCCCTGAGGG...TTGCACCCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | GTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGCTGGAGTAGAGCCTGACATGTGTAATGACCTCTaGGGCTGCCCAGCGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VQRAGFNVTGMEAGVEPDMCNDL*GCPAKQ Trigger: TTGCTTCGCTGGGCAGCCCCAGAGGTCATTACACAT...GTCAGGCTCTACTCCAGCTTCCATGCCTGTCACATTAAACCCAGCCCTCTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR TCA 90 bp | TGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGCTGGAGCTGAGCCACATCACTaGAGGTGGAAAGACCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: WGCNVQRAGFNVTGMEAGAEPHH*RWKDQT Trigger: AGTTTGGTCTTTCCACCTTCAGTGATGTGGCTCAGC...TCCAGCTTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATTGCACCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114732.3 ENSMUST00000167497.2 |
||
| CDS-3UTR GCA 90 bp | TTCCCTTCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGTGTGATGCTGTTGGCTaGCCGGCTCACCTGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FPSFPLIWGRLLEEQDLGCDAVG*PAHLVH Trigger: ATGCACCAGGTGAGCCGGGCAGCCAACAGCATCACA...CCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGAAGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | TGGAAGAGCAGGATTTGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACACACTCACACCCAGGCTaGAACAGGCTCGTACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WKSRIWGCNVQRAGFNVTHSHPG*NRLVQR Trigger: TCTCTGTACGAGCCTGTTCCAGCCTGGGTGTGAGTG...TGTCACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCTGCTCTTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTCCACCCTATGGCACCTTACACACCAGGTaGCTATTCACTAGCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: EAGVEPDSVSHAPSPPYGTLHTR*LFTSTL Trigger: AAGTGTGCTAGTGAATAGCCACCTGGTGTGTAAGGT...GCCATAGGGTGGAGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR TCA 90 bp | TTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGGTGCAATGTCCTCTGGTTCTGCATaGGCTACACAGGTGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FPFNMGEAVGRAGFGGAMSSGSA*ATQVPT Trigger: TGTGGGCACCTGTGTAGCTCATGCAGAACCAGAGGA...CATTGCACCCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR TCA 90 bp | TTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGGTGCAATGAAGGAACTTGAACCCTaGGGACTGTGGCCGAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: FPFNMGEAVGRAGFGGAMKELEP*GLWPRR Trigger: ACGTCTCGGCCACAGTCCTCAGGGTTCAAGTTCCTT...CATTGCACCCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR TCA 90 bp | TTCCCTTCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGTCTTCCAGGCTGAGCTaGGCCACATCACTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FPSFPLIWGRLLEEQDLGSSRLS*ATSLKV Trigger: CACCTTCAGTGATGTGGCTCAGCTCAGCCTGGAAGA...CCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGAAGGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCTGGTCATAGTAGCGCAGCTGGTAGTCGAGGATGTTCCCATTTGTTTGCCAGTGCAGCATGAGTaGCGAGCCTTGCACCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FCLVIVAQLVVEDVPICLPVQHE*RALHLK Trigger: TTTGAGGTGCAAGGCTCGGCACTCATGCTGCACTGG...CAAACAAATGGGAACATCCTCGACTACCAGCTGCGCTACTATGACCAGGCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
||
| CDS-3UTR GCA 90 bp | TCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGGTGCAACGGGCACGGTCCTTCTaGCAAGTGTCTAGCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFPLIWGRLLEEQDLGVQRARSF*QVSSIS Trigger: ACTGATGCTAGACACTTGGCAGAAGGACCGTGCCCG...TTGCACCCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | TCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGGTGCAACGAGTCAGACGGCGCTaGTCATCTAGAACACTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SFPLIWGRLLEEQDLGVQRVRRR*SSRTLT Trigger: GGTGAGTGTTCTAGATGACCAGCGCCGTCTGACTCG...TTGCACCCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | TGTTGGAAGAGCAGGATTTGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGTCAACCGTGTCACAGTaGCAGTGTTGGTCTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CWKSRIWGCNVQRAGFNVSTVSQ*QCWSHW Trigger: CCAGTGAGACCAACACTGCCACTGTGACACGGTTGA...CACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCTGCTCTTCCAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | AAATTCCCTTCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGACAGACTGCACACCATaGCCGCCACCACTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KFPSFPLIWGRLLEEQDLTDCTP*PPPLCS Trigger: GGAGCAGAGTGGTGGCGGGCATGGTGTGCAGTCTGT...CAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGAAGGGAATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR GCA 90 bp | TCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGGTGCAAATCCTCCTCTGGTTCTaGATGAGCTACACAGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFPLIWGRLLEEQDLGVQILLWF*MSYTGA Trigger: GGCACCTGTGTAGCTCATGCAGAACCAGAGGAGGAT...TTGCACCCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CCA 90 bp | AATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGCTGGAGTAGAGCCTTGTTTGCTCAGGCTGTaGCCAGGATACTGTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: NVQRAGFNVTGMEAGVEPCLLRL*PGYCDA Trigger: AGCATCACAGTATCCTGGCCACAGCCTGAGCAAACA...AGGCTCTACTCCAGCTTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR GCA 90 bp | TCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGGTGCAATCCACAAAGTGTGTCTaGAGCCAATTGTCCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFPLIWGRLLEEQDLGVQSTKCV*SQLSWP Trigger: TGGCCAGGACAATTGGCTGCAGACACACTTTGTGGA...TTGCACCCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR GCA 90 bp | TGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGCTGGATTCTCCAAAGGAACCTaGCCCAATGACTTCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WGCNVQRAGFNVTGMEAGFSKGT*PNDFFN Trigger: ATTGAAGAAGTCATTGGGGCAGGTTCCTTTGGAGAA...TCCAGCTTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATTGCACCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR GCA 90 bp | AATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGCTGGAGTAGAGCCTGGCAGCCGGAACTCTTaGTCTATTGCATTTAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: NVQRAGFNVTGMEAGVEPGSRNS*SIAFST Trigger: GGTACTAAATGCAATAGAGCAAGAGTTCCGGCTGCC...AGGCTCTACTCCAGCTTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR CCA 90 bp | TGTTGGAAGAGCAGGATTTGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGTACTCCATCCTCCTCTaGTTCTGCATGAGCTACACA | + |
|
Preference number: 4 (lower is better) Translates to: CWKSRIWGCNVQRAGFNVYSILL*FCMSYT Trigger: TGTGTAGCTCATGCAGAACCAGAGGAGGATGGAGTA...CACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCTGCTCTTCCAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR GCA 90 bp | AAATTCCCTTCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGATGTTCCCATTTGTTTaGTCAGGCTGTGGCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KFPSFPLIWGRLLEEQDLMFPFV*SGCGQD Trigger: ATCCTGGCCACAGCCTGAGCAAACAAATGGGAACAT...CAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGAAGGGAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS TCA 90 bp | GATCCCCTCGTCCACCCAGCTCCTGAGGCAGACGCCAGTGCAGCATaGGTGCCGAGCCTTGCACCTCAAACCATAGCTCCCGGGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: DPLVHPAPEADASAA*VPSLAPQTIAPGEP Trigger: CGGCTCCCCGGGAGCTATGGTTTGAGGTGCAAGGCTCGGCACTCATGCTGCACTGGCGTCTGCCTCAGGAGCTGGGTGGACGAGGGGATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114732.3 ENSMUST00000167082.2 |
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| CDS CCA 90 bp | GATCCCTCAGGGCAGGCTTGGCAGAGCTTGTCTCCACGAGCAGGCTaGTGTCCAGGCTGGCAGCGGCAGCCTCCCACAGCTACCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: DPSGQAWQSLSPRAG*CPGWQRQPPTATIH Trigger: GTGGATGGTAGCTGTGGGAGGCTGCCGCTGCCAGCCTGGACACCAGCCTGCTCGTGGAGACAAGCTCTGCCAAGCCTGCCCTGAGGGATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR CAA 90 bp | TCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCTTCCAGCCGCAGGATATaGGGGTGCTGGAACTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SHAPSPPYGQDWVGASAASSRRI*GCWNWP Trigger: GGGCCAGTTCCAGCACCCCAATATCCTGCGGCTGGA...AGCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS CCA 90 bp | CTCTGGTGGGTCCGAACTTGGCAGAGCTTGTCTCCACGAGCAGGCTaGTGTCCAGGCTGGCAGCGGCAGCCTCCCACAGCTACCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LWWVRTWQSLSPRAG*CPGWQRQPPTATIH Trigger: GTGGATGGTAGCTGTGGGAGGCTGCCGCTGCCAGCCTGGACACCAGCCTGCTCGTGGAGACAAGCTCTGCCAAGTTCGGACCCACCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| CDS GCA 90 bp | CGGATGTGTGCCCTCTGGGCCCCTCGCCGTTCCACAAAGTGTGTCTaGAGCCAATTGTCCTGGCCAGAACCAGGAGGGAGCCCTGCAACG | + |
|
Preference number: 5 (lower is better) Translates to: RMCALWAPRRSTKCV*SQLSWPEPGGSPAT Trigger: CGTTGCAGGGCTCCCTCCTGGTTCTGGCCAGGACAATTGGCTGCAGACACACTTTGTGGAACGGCGAGGGGCCCAGAGGGCACACATCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS CCA 90 bp | AAGCCTTGGAGACATGGGCAAACTGGGGCTGCAGGGTCAGGGGAGTaGCTGCGGGCTGGACACGGTGAACAGGGAACATTCCCAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPWRHGQTGAAGSGE*LRAGHGEQGTFPAR Trigger: CCTGGCTGGGAATGTTCCCTGTTCACCGTGTCCAGCCCGCAGCCACTCCCCTGACCCTGCAGCCCCAGTTTGCCCATGTCTCCAAGGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS CCA 90 bp | GAGCCGATGGAGGACCAGTGCAGGGAGCCTCTGGTGGGTCCGAACTaGCCCTGTAGAAGCCTTGGAGACATGGGCAAACTGGGGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EPMEDQCREPLVGPN*PCRSLGDMGKLGLQ Trigger: CTGCAGCCCCAGTTTGCCCATGTCTCCAAGGCTTCTACAGGGCCAGTTCGGACCCACCAGAGGCTCCCTGCACTGGTCCTCCATCGGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS-3UTR CAA 90 bp | CTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCACTTTGGTCCAGCGTTaGAGGTGCCAGGCCGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: LTRPFSTLWPGLGWGIGGTLVQR*RCQAAI Trigger: TATTGCGGCCTGGCACCTCAAACGCTGGACCAAAGT...GCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS TCA 90 bp | GTACCCCCACTCACACCCAGGCTGGAACAGGCTCGTACAGAGAAGTaGAGGCGGATGTGTGCCCTCTGGGCCCCTCGCCGTTCCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VPPLTPRLEQARTEK*RRMCALWAPRRSTK Trigger: CTTTGTGGAACGGCGAGGGGCCCAGAGGGCACACATCCGCCTTCACTTCTCTGTACGAGCCTGTTCCAGCCTGGGTGTGAGTGGGGGTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS TCA 90 bp | TACTGTCGGGGCCGTCTGGCTCATCAGCCTGCCGGTAGTAAAGGGTaGAGGTCTCTCGGCAGGTACCCCCACTCACACCCAGGCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: YCRGRLAHQPAGSKG*RSLGRYPHSHPGWN Trigger: GTTCCAGCCTGGGTGTGAGTGGGGGTACCTGCCGAGAGACCTTCACCCTTTACTACCGGCAGGCTGATGAGCCAGACGGCCCCGACAGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS GCA 90 bp | GTGTGTCTGCAGCCAATTGTCCTGGCCAGAACCAGGAGGGAGCCCTaGAACGTGGCATGCTTCGAAGGTCCGAGTCAGACGGCGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VCLQPIVLARTRREP*NVACFEGPSQTALV Trigger: GACCAGCGCCGTCTGACTCGGACCTTCGAAGCATGCCACGTTGCAGGGCTCCCTCCTGGTTCTGGCCAGGACAATTGGCTGCAGACACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS CCA 90 bp | GGTCCAGCGTTTGAGGTGCCAGGCCGCAATACTGTCGGGGCCGTCTaGCTCATCAGCCTGCCGGTAGTAAAGGGTGAAGGTCTCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GPAFEVPGRNTVGAV*LISLPVVKGEGLSA Trigger: TGCCGAGAGACCTTCACCCTTTACTACCGGCAGGCTGATGAGCCAGACGGCCCCGACAGTATTGCGGCCTGGCACCTCAAACGCTGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS CCA 90 bp | CACAGGTGCCCACAGCTGCCACTAAGGAAGCCCCTCCAGCTCCACTaGCCTGTGTCTCAGGAAAAGAGGCAAAGGCACGCAGGACGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HRCPQLPLRKPLQLH*PVSQEKRQRHAGRR Trigger: CCTCCGTCCTGCGTGCCTTTGCCTCTTTTCCTGAGACACAGGCCAGTGGAGCTGGAGGGGCTTCCTTAGTGGCAGCTGTGGGCACCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS TCA 90 bp | CACTGCTGGGCTCTCCGTGACCTCCACACTCCTTGCACACAACATTaGAGAGCAGATCCCCTCGTCCACCCAGCTCCTGAGGCAGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: HCWALRDLHTPCTQH*RADPLVHPAPEADA Trigger: GGCGTCTGCCTCAGGAGCTGGGTGGACGAGGGGATCTGCTCTTCAATGTTGTGTGCAAGGAGTGTGGAGGTCACGGAGAGCCCAGCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114732.3 ENSMUST00000167082.2 |
||
| CDS GCA 90 bp | GGCCTCCTACTCCATCCTCCTCTGGTTCTGCATGAGCTACACAGGTaGCCACAGCTGCCACTAAGGAAGCCCCTCCAGCTCCACTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLLLHPPLVLHELHR*PQLPLRKPLQLHWP Trigger: AGGCCAGTGGAGCTGGAGGGGCTTCCTTAGTGGCAGCTGTGGGCACCTGTGTAGCTCATGCAGAACCAGAGGAGGATGGAGTAGGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS GCA 90 bp | AAGTACTGCATGGCAGCAGCCACACCCCGCTGCATGGCCACCAGCTaGAGGCTACTGAACTGGCCCTCTCGCTGCCTAAGAAAGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KYCMAAATPRCMATS*RLLNWPSRCLRKLS Trigger: GGACAGCTTTCTTAGGCAGCGAGAGGGCCAGTTCAGTAGCCTGCAGCTGGTGGCCATGCAGCGGGGTGTGGCTGCTGCCATGCAGTACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS CCA 90 bp | TGGGCCCCTCGCCGTTCCACAAAGTGTGTCTGCAGCCAATTGTCCTaGCCAGAACCAGGAGGGAGCCCTGCAACGTGGCATGCTTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WAPRRSTKCVCSQLS*PEPGGSPATWHASK Trigger: CTTCGAAGCATGCCACGTTGCAGGGCTCCCTCCTGGTTCTGGCCAGGACAATTGGCTGCAGACACACTTTGTGGAACGGCGAGGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CAA 90 bp | CTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGGGGCATCGGCGGCGGCTTGCGAATCATCTaGTCAAATGCAGCTACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LTRPFSTLWPGLGWGIGGGLRII*SNAATS Trigger: GCTGGTAGCTGCATTTGACAAGATGATTCGCAAGCC...GCCGCCGATGCCCCAACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS GCA 90 bp | CTTCCAGAGCTAGAACTGATGACCCTAGAACCAGGAGCCACAGACTaGACACCATGCCCGCCACCACTCTGCTCCCTGAGCCAGTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPELELMTLEPGATD*TPCPPPLCSLSQSC Trigger: GCACGACTGGCTCAGGGAGCAGAGTGGTGGCGGGCATGGTGTGCAGTCTGTGGCTCCTGGTTCTAGGGTCATCAGTTCTAGCTCTGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS CCA 90 bp | TGCAGCCAATTGTCCTGGCCAGAACCAGGAGGGAGCCCTGCAACGTaGCATGCTTCGAAGGTCCGAGTCAGACGGCGCTGGTCATCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: CSQLSWPEPGGSPAT*HASKVRVRRRWSSR Trigger: TCTAGATGACCAGCGCCGTCTGACTCGGACCTTCGAAGCATGCCACGTTGCAGGGCTCCCTCCTGGTTCTGGCCAGGACAATTGGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS CCA 90 bp | CTAGCACACTTCGGGCCGAGAGTGCTCGGTGAACAAAGGCAAAGCTaGACAAGTACTGCATGGCAGCAGCCACACCCCGCTGCATGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LAHFGPRVLGEQRQS*TSTAWQQPHPAAWP Trigger: TGGCCATGCAGCGGGGTGTGGCTGCTGCCATGCAGTACTTGTCCAGCTTTGCCTTTGTTCACCGAGCACTCTCGGCCCGAAGTGTGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CAA 90 bp | GGCATGGAAGCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTCCACCCAGCTCAGACACCCCATaGACAGCCTGCACTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GMEAGVEPDSVSHAPSPPSSDTP*TACTSK Trigger: CTTGGAAGTGCAGGCTGTCAATGGGGTGTCTGAGCT...GGGTGGAGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGCTTCCATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGGATTTGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGCAGGCTTGGCAGAGCTaGTCTCCACGAGCAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRIWGCNVQRAGFNVTGMQAWQS*SPRAGW Trigger: CCAGCCTGCTCGTGGAGACAAGCTCTGCCAAGCCTG...CATGCCTGTCACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CAA 90 bp | GAGCCTGACTCAGTCTCACACGCCCCTTCTCCACCCTATGGCCAGGACTGGGTTGCTGTATTGTTGCAGTaGTTCTGTGTAGCCGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EPDSVSHAPSPPYGQDWVAVLLQ*FCVAGP Trigger: GGGACCGGCTACACAGAACAACTGCAACAATACAGC...AACCCAGTCCTGGCCATAGGGTGGAGAAGGGGCGTGTGAGACTGAGTCAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS TCA 90 bp | ACCAGGTGGCTATTCACTAGCACACTTCGGGCCGAGAGTGCTCGGTaGACAAAGGCAAAGCTGGACAAGTACTGCATGGCAGCAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TRWLFTSTLRAESAR*TKAKLDKYCMAAAT Trigger: TGTGGCTGCTGCCATGCAGTACTTGTCCAGCTTTGCCTTTGTTCACCGAGCACTCTCGGCCCGAAGTGTGCTAGTGAATAGCCACCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CAA 90 bp | TGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGCTGGAGTCACAGTGGCAGTGTaGGTCTCACTGGTCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WGCNVQRAGFNVTGMEAGVTVAV*VSLVMV Trigger: CACCATGACCAGTGAGACCAACACTGCCACTGTGAC...TCCAGCTTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATTGCACCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS TCA 90 bp | GGCTCAACCGTGTCACAGTGGCAGTGTTGGTCTCACTGGTCATGGTaGAGGAGTGGGATTCATCTTCTGCCTGGTCATAGTAGCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSTVSQWQCWSHWSW*RSGIHLLPGHSSAA Trigger: AGCTGCGCTACTATGACCAGGCAGAAGATGAATCCCACTCCTTCACCATGACCAGTGAGACCAACACTGCCACTGTGACACGGTTGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS GCA 90 bp | CCCTTCAGCCTGGAGAGTATCAGGCTTGCGAATCATCTTGTCAAATaGAGCTACCAGCTGGTCAAAATGAGGCCGACGGGCACGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PFSLESIRLANHLVK*SYQLVKMRPTGTVL Trigger: AAGGACCGTGCCCGTCGGCCTCATTTTGACCAGCTGGTAGCTGCATTTGACAAGATGATTCGCAAGCCTGATACTCTCCAGGCTGAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CAA 90 bp | ATGGAAGCTGGAGTAGAGCCTGACTCAGTCTCACACGCCCCTTCTCCACCCTATGCAATTGTGTCCACTTaGGTCCAGCGTTTGAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: MEAGVEPDSVSHAPSPPYAIVST*VQRLRC Trigger: GCACCTCAAACGCTGGACCAAAGTGGACACAATTGC...ATAGGGTGGAGAAGGGGCGTGTGAGACTGAGTCAGGCTCTACTCCAGCTTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CAA 90 bp | TTCCCTTCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGGGCCCTGTAGAAGCCTaGGAGACATGGGCAAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: FPSFPLIWGRLLEEQDLGGPVEA*ETWANW Trigger: CCAGTTTGCCCATGTCTCCAAGGCTTCTACAGGGCC...CCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGAAGGGAA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CAA 90 bp | AAATTCCCTTCTTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGATACTGTGATGCTGTaGGCTGCCCGGCTCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KFPSFPLIWGRLLEEQDLDTVML*AARLTW Trigger: CCAGGTGAGCCGGGCAGCCAACAGCATCACAGTATC...CAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAAGAAGGGAATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CAA 90 bp | AGGATTTGGGGGTGCAATGTCCAGAGGGCTGGGTTTAATGTGACAGGCATGGAAGGAACTCTTGCTCTATaGCATTTAGTACCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RIWGCNVQRAGFNVTGMEGTLAL*HLVPPA Trigger: AGCAGGAGGTACTAAATGCAATAGAGCAAGAGTTCC...TTCCATGCCTGTCACATTAAACCCAGCCCTCTGGACATTGCACCCCCAAATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS-3UTR CAA 90 bp | TTTCCCTTTAATATGGGGGAGGCTGTTGGAAGAGCAGGATTTGGGGGTGCAATGTGGAGAGTATCAGGCTaGCGAATCATCTTGTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FPFNMGEAVGRAGFGGAMWRVSG*RIILSN Trigger: ATTTGACAAGATGATTCGCAAGCCTGATACTCTCCA...CATTGCACCCCCAAATCCTGCTCTTCCAACAGCCTCCCCCATATTAAAGGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS CCA 72 bp | GGGCAGGCTTGGCAGAGCTTGTCTCCACGAGCAGGCTaGTGTCCAGGCTGGCAGCGGCAGCCTCCCACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GQAWQSLSPRAG*CPGWQRQPPTA Trigger: AGCTGTGGGAGGCTGCCGCTGCCAGCCTGGACACCAGCCTGCTCGTGGAGACAAGCTCTGCCAAGCCTGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS CCA 72 bp | CCGGGGAGCCGATGGAGGACCAGTGCAGGGAGCCTCTaGTGGGTCCGAACTGGCCCTGTAGAAGCCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGSRWRTSAGSL*WVRTGPVEALE Trigger: CTCCAAGGCTTCTACAGGGCCAGTTCGGACCCACCAGAGGCTCCCTGCACTGGTCCTCCATCGGCTCCCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS GCA 72 bp | CCTGTAGAAGCCTTGGAGACATGGGCAAACTGGGGCTaGAGGGTCAGGGGAGTGGCTGCGGGCTGGACACGG | + |
|
Preference number: 6 (lower is better) Translates to: PVEALETWANWG*RVRGVAAGWTR Trigger: CCGTGTCCAGCCCGCAGCCACTCCCCTGACCCTGCAGCCCCAGTTTGCCCATGTCTCCAAGGCTTCTACAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS CCA 72 bp | ACTGGCCCTGTAGAAGCCTTGGAGACATGGGCAAACTaGGGCTGCAGGGTCAGGGGAGTGGCTGCGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TGPVEALETWAN*GCRVRGVAAGW Trigger: CCAGCCCGCAGCCACTCCCCTGACCCTGCAGCCCCAGTTTGCCCATGTCTCCAAGGCTTCTACAGGGCCAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS CCA 72 bp | CAAGGGAAGTCCAAGGCCACAGGGTTCAGAAGAGCCTaGGAAGGCCTGTCCCCGGAGCCCCCTTCAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QGKSKATGFRRA*EGLSPEPPSAW Trigger: CCAGGCTGAAGGGGGCTCCGGGGACAGGCCTTCCCAGGCTCTTCTGAACCCTGTGGCCTTGGACTTCCCTTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS CCA 72 bp | GTCCGAACTTGGCAGAGCTTGTCTCCACGAGCAGGCTaGTGTCCAGGCTGGCAGCGGCAGCCTCCCACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VRTWQSLSPRAG*CPGWQRQPPTA Trigger: AGCTGTGGGAGGCTGCCGCTGCCAGCCTGGACACCAGCCTGCTCGTGGAGACAAGCTCTGCCAAGTTCGGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
||
| CDS CCA 72 bp | CCGGGGAGCCGATGGAGGACCAGTGCAGGGAGCCTCTaGTGGGTCCGAACTTGGCAGAGCTTGTCTCCACGA | + |
|
Preference number: 6 (lower is better) Translates to: PGSRWRTSAGSL*WVRTWQSLSPR Trigger: TCGTGGAGACAAGCTCTGCCAAGTTCGGACCCACCAGAGGCTCCCTGCACTGGTCCTCCATCGGCTCCCCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
||
| CDS TCA 72 bp | CTCACACCCAGGCTGGAACAGGCTCGTACAGAGAAGTaGAGGCGGATGTGTGCCCTCTGGGCCCCTCGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LTPRLEQARTEK*RRMCALWAPRR Trigger: ACGGCGAGGGGCCCAGAGGGCACACATCCGCCTTCACTTCTCTGTACGAGCCTGTTCCAGCCTGGGTGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS GCA 72 bp | CTGGCCAGAACCAGGAGGGAGCCCTGCAACGTGGCATaGTTCGAAGGTCCGAGTCAGACGGCGCTGGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LARTRREPCNVA*FEGPSQTALVI Trigger: GATGACCAGCGCCGTCTGACTCGGACCTTCGAAGCATGCCACGTTGCAGGGCTCCCTCCTGGTTCTGGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS GCA 72 bp | GCCCTCTGGGCCCCTCGCCGTTCCACAAAGTGTGTCTaGAGCCAATTGTCCTGGCCAGAACCAGGAGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ALWAPRRSTKCV*SQLSWPEPGGS Trigger: GCTCCCTCCTGGTTCTGGCCAGGACAATTGGCTGCAGACACACTTTGTGGAACGGCGAGGGGCCCAGAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS GCA 72 bp | ATGGCAGCAGCCACACCCCGCTGCATGGCCACCAGCTaGAGGCTACTGAACTGGCCCTCTCGCTGCCTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: MAAATPRCMATS*RLLNWPSRCLR Trigger: TCTTAGGCAGCGAGAGGGCCAGTTCAGTAGCCTGCAGCTGGTGGCCATGCAGCGGGGTGTGGCTGCTGCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS CCA 72 bp | TTGTCCTGGCCAGAACCAGGAGGGAGCCCTGCAACGTaGCATGCTTCGAAGGTCCGAGTCAGACGGCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSWPEPGGSPAT*HASKVRVRRRW Trigger: CCAGCGCCGTCTGACTCGGACCTTCGAAGCATGCCACGTTGCAGGGCTCCCTCCTGGTTCTGGCCAGGACAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS CCA 72 bp | GGGAGCCGATGGAGGACCAGTGCAGGGAGCCTCTGGTaGGTCCGAACTGGCCCTGTAGAAGCCTTGGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: GSRWRTSAGSLW*VRTGPVEALET Trigger: TGTCTCCAAGGCTTCTACAGGGCCAGTTCGGACCCACCAGAGGCTCCCTGCACTGGTCCTCCATCGGCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS CAA 72 bp | GAGGACCAGTGCAGGGAGCCTCTGGTGGGTCCGAACTaGGCAGAGCTTGTCTCCACGAGCAGGCTGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: EDQCREPLVGPN*AELVSTSRLVS Trigger: GGACACCAGCCTGCTCGTGGAGACAAGCTCTGCCAAGTTCGGACCCACCAGAGGCTCCCTGCACTGGTCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167082.2 |
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| CDS CAA 90 bp | GCCCTCTGGGCCCCTCGCCGTTCCACAAAGTGTGTCTGCAGCCAATaGTCCTGGCCAGAACCAGGAGGGAGCCCTGCAACGTGGCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: ALWAPRRSTKCVCSQ*SWPEPGGSPATWHA Trigger: AGCATGCCACGTTGCAGGGCTCCCTCCTGGTTCTGGCCAGGACAATTGGCTGCAGACACACTTTGTGGAACGGCGAGGGGCCCAGAGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS TCA 72 bp | GGCCGTCTGGCTCATCAGCCTGCCGGTAGTAAAGGGTaGAGGTCTCTCGGCAGGTACCCCCACTCACACCCA | + |
|
Preference number: 6 (lower is better) Translates to: GRLAHQPAGSKG*RSLGRYPHSHP Trigger: TGGGTGTGAGTGGGGGTACCTGCCGAGAGACCTTCACCCTTTACTACCGGCAGGCTGATGAGCCAGACGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS TCA 72 bp | GTCCACCCAGCTCCTGAGGCAGACGCCAGTGCAGCATaGGTGCCGAGCCTTGCACCTCAAACCATAGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VHPAPEADASAA*VPSLAPQTIAP Trigger: GGGAGCTATGGTTTGAGGTGCAAGGCTCGGCACTCATGCTGCACTGGCGTCTGCCTCAGGAGCTGGGTGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114732.3 ENSMUST00000167082.2 |
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| CDS GCA 72 bp | ATGACCCTAGAACCAGGAGCCACAGACTGCACACCATaGCCGCCACCACTCTGCTCCCTGAGCCAGTCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: MTLEPGATDCTP*PPPLCSLSQSC Trigger: GCACGACTGGCTCAGGGAGCAGAGTGGTGGCGGGCATGGTGTGCAGTCTGTGGCTCCTGGTTCTAGGGTCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS CCA 72 bp | TGGGTCCGAACTGGCCCTGTAGAAGCCTTGGAGACATaGGCAAACTGGGGCTGCAGGGTCAGGGGAGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: WVRTGPVEALET*ANWGCRVRGVA Trigger: AGCCACTCCCCTGACCCTGCAGCCCCAGTTTGCCCATGTCTCCAAGGCTTCTACAGGGCCAGTTCGGACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS CAA 72 bp | GCCCCTCGCCGTTCCACAAAGTGTGTCTGCAGCCAATaGTCCTGGCCAGAACCAGGAGGGAGCCCTGCAACG | + |
|
Preference number: 6 (lower is better) Translates to: APRRSTKCVCSQ*SWPEPGGSPAT Trigger: CGTTGCAGGGCTCCCTCCTGGTTCTGGCCAGGACAATTGGCTGCAGACACACTTTGTGGAACGGCGAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS GCA 72 bp | CAGCCAATTGTCCTGGCCAGAACCAGGAGGGAGCCCTaGAACGTGGCATGCTTCGAAGGTCCGAGTCAGACG | + |
|
Preference number: 6 (lower is better) Translates to: QPIVLARTRREP*NVACFEGPSQT Trigger: CGTCTGACTCGGACCTTCGAAGCATGCCACGTTGCAGGGCTCCCTCCTGGTTCTGGCCAGGACAATTGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS GCA 72 bp | GCGGCAATTGTGTCCACTTTGGTCCAGCGTTTGAGGTaGCAGGCCGCAATACTGTCGGGGCCGTCTGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: AAIVSTLVQRLR*QAAILSGPSGS Trigger: TGAGCCAGACGGCCCCGACAGTATTGCGGCCTGGCACCTCAAACGCTGGACCAAAGTGGACACAATTGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS TCA 72 bp | CATCTGCGGCAATTGTGTCCACTTTGGTCCAGCGTTTaGGGTGCCAGGCCGCAATACTGTCGGGGCCGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HLRQLCPLWSSV*GARPQYCRGRL Trigger: CAGACGGCCCCGACAGTATTGCGGCCTGGCACCTCAAACGCTGGACCAAAGTGGACACAATTGCCGCAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS CCA 72 bp | CGCCGTTCCACAAAGTGTGTCTGCAGCCAATTGTCCTaGCCAGAACCAGGAGGGAGCCCTGCAACGTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RRSTKCVCSQLS*PEPGGSPATWH Trigger: ATGCCACGTTGCAGGGCTCCCTCCTGGTTCTGGCCAGGACAATTGGCTGCAGACACACTTTGTGGAACGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS CCA 72 bp | TTTGAGGTGCCAGGCCGCAATACTGTCGGGGCCGTCTaGCTCATCAGCCTGCCGGTAGTAAAGGGTGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: FEVPGRNTVGAV*LISLPVVKGEG Trigger: ACCTTCACCCTTTACTACCGGCAGGCTGATGAGCCAGACGGCCCCGACAGTATTGCGGCCTGGCACCTCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS CCA 72 bp | CCACAGCTGCCACTAAGGAAGCCCCTCCAGCTCCACTaGCCTGTGTCTCAGGAAAAGAGGCAAAGGCACGCA | + |
|
Preference number: 6 (lower is better) Translates to: PQLPLRKPLQLH*PVSQEKRQRHA Trigger: TGCGTGCCTTTGCCTCTTTTCCTGAGACACAGGCCAGTGGAGCTGGAGGGGCTTCCTTAGTGGCAGCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS CCA 72 bp | TTCGGGCCGAGAGTGCTCGGTGAACAAAGGCAAAGCTaGACAAGTACTGCATGGCAGCAGCCACACCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: FGPRVLGEQRQS*TSTAWQQPHPA Trigger: AGCGGGGTGTGGCTGCTGCCATGCAGTACTTGTCCAGCTTTGCCTTTGTTCACCGAGCACTCTCGGCCCGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS CCA 72 bp | GGACTGTGGCCGAGACGTGCCACCTTACACACCAGGTaGCTATTCACTAGCACACTTCGGGCCGAGAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLWPRRATLHTR*LFTSTLRAESA Trigger: AGCACTCTCGGCCCGAAGTGTGCTAGTGAATAGCCACCTGGTGTGTAAGGTGGCACGTCTCGGCCACAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS GCA 72 bp | ACCCAGAAAGGTCATCTTCAGGCTCTCAGCACCCCCTaGCCACAAGGCCTGGATAGCCACAGCTTGTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: TQKGHLQALSTP*PQGLDSHSLFP Trigger: AGGGAACAAGCTGTGGCTATCCAGGCCTTGTGGGCAGGGGGTGCTGAGAGCCTGAAGATGACCTTTCTGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS CCA 72 bp | GCCTGGGAAGGCCTGTCCCCGGAGCCCCCTTCAGCCTaGAGAGTATCAGGCTTGCGAATCATCTTGTCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: AWEGLSPEPPSA*RVSGLRIILSN Trigger: ATTTGACAAGATGATTCGCAAGCCTGATACTCTCCAGGCTGAAGGGGGCTCCGGGGACAGGCCTTCCCAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS CAA 72 bp | TCATCTGCGGCAATTGTGTCCACTTTGGTCCAGCGTTaGAGGTGCCAGGCCGCAATACTGTCGGGGCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSAAIVSTLVQR*RCQAAILSGPS Trigger: AGACGGCCCCGACAGTATTGCGGCCTGGCACCTCAAACGCTGGACCAAAGTGGACACAATTGCCGCAGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS GCA 72 bp | CCCCGGAGCCCCCTTCAGCCTGGAGAGTATCAGGCTTaGGAATCATCTTGTCAAATGCAGCTACCAGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRSPLQPGEYQA*ESSCQMQLPAG Trigger: ACCAGCTGGTAGCTGCATTTGACAAGATGATTCGCAAGCCTGATACTCTCCAGGCTGAAGGGGGCTCCGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS CAA 72 bp | ATGTGGCCAGGGCTCAACCGTGTCACAGTGGCAGTGTaGGTCTCACTGGTCATGGTGAAGGAGTGGGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: MWPGLNRVTVAV*VSLVMVKEWDS Trigger: TGAATCCCACTCCTTCACCATGACCAGTGAGACCAACACTGCCACTGTGACACGGTTGAGCCCTGGCCACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS TCA 72 bp | CTATTCACTAGCACACTTCGGGCCGAGAGTGCTCGGTaGACAAAGGCAAAGCTGGACAAGTACTGCATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LFTSTLRAESAR*TKAKLDKYCMA Trigger: TGCCATGCAGTACTTGTCCAGCTTTGCCTTTGTTCACCGAGCACTCTCGGCCCGAAGTGTGCTAGTGAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
||
| CDS TCA 72 bp | ATCATCTTGTCAAATGCAGCTACCAGCTGGTCAAAATaGGGCCGACGGGCACGGTCCTTCTGCCAAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: IILSNAATSWSK*GRRARSFCQVS Trigger: AGACACTTGGCAGAAGGACCGTGCCCGTCGGCCTCATTTTGACCAGCTGGTAGCTGCATTTGACAAGATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS GCA 72 bp | CTGGAGAGTATCAGGCTTGCGAATCATCTTGTCAAATaGAGCTACCAGCTGGTCAAAATGAGGCCGACGGGC | + |
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Preference number: 6 (lower is better) Translates to: LESIRLANHLVK*SYQLVKMRPTG Trigger: GCCCGTCGGCCTCATTTTGACCAGCTGGTAGCTGCATTTGACAAGATGATTCGCAAGCCTGATACTCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS TCA 72 bp | GTGTCACAGTGGCAGTGTTGGTCTCACTGGTCATGGTaGAGGAGTGGGATTCATCTTCTGCCTGGTCATAGT | + |
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Preference number: 6 (lower is better) Translates to: VSQWQCWSHWSW*RSGIHLLPGHS Trigger: ACTATGACCAGGCAGAAGATGAATCCCACTCCTTCACCATGACCAGTGAGACCAACACTGCCACTGTGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS CAA 90 bp | CGACGCACTTCTCCAAAGGAACCTGCCCCAATGACTTCTTCAATCTaGATATATGTAGGGTCAACCTCTCGAGCAAGCTCTCTGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: RRTSPKEPAPMTSSI*IYVGSTSRASSLMA Trigger: GGCCATCAGAGAGCTTGCTCGAGAGGTTGACCCTACATATATCAAGATTGAAGAAGTCATTGGGGCAGGTTCCTTTGGAGAAGTGCGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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| CDS CAA 72 bp | TCTCCAAAGGAACCTGCCCCAATGACTTCTTCAATCTaGATATATGTAGGGTCAACCTCTCGAGCAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SPKEPAPMTSSI*IYVGSTSRASS Trigger: AGAGCTTGCTCGAGAGGTTGACCCTACATATATCAAGATTGAAGAAGTCATTGGGGCAGGTTCCTTTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114732.3 |
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