Pregenerated sensors for EPHA8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028661Ensembl transcript IDs: ENSMUST00000030420.9
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGGACCTGAGGTATTGCCATGGTGGGTTCACCCAGGCTGGGCAGTaGGCCTGGTGCTGGTGTGATTCGGAAGCAGCCTGGGCTCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: PDLRYCHGGFTQAGQ*AWCWCDSEAAWAPA Trigger: GGCTGGAGCCCAGGCTGCTTCCGAATCACACCAGCACCAGGCCCACTGCCCAGCCTGGGTGAACCCACCATGGCAATACCTCAGGTCCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR TCA 90 bp | CCATGGTGGGTTCACCCAGGCTGGGCAGTGGGCCTGGTGCTGGTGTaGTTCGGAAGCAGCCTGGGCTCCAGCCTGCAGGCACTGTCTGAT | + |
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Preference number: 1 (lower is better) Translates to: PWWVHPGWAVGLVLV*FGSSLGSSLQALSD Trigger: ATCAGACAGTGCCTGCAGGCTGGAGCCCAGGCTGCTTCCGAATCACACCAGCACCAGGCCCACTGCCCAGCCTGGGTGAACCCACCATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR TCA 90 bp | GCTGCAGGTGGCCCTGCCCTCCAAAGTAGGAAGGAGTCCCGGACCTaGGGTATTGCCATGGTGGGTTCACCCAGGCTGGGCAGTGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: AAGGPALQSRKESRT*GIAMVGSPRLGSGP Trigger: AGGCCCACTGCCCAGCCTGGGTGAACCCACCATGGCAATACCTCAGGTCCGGGACTCCTTCCTACTTTGGAGGGCAGGGCCACCTGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR TCA 90 bp | TGGCCAGGCAGTCATGCCCCACCGAGGGCATCTCACGCTCTGCTGTaGTCCTCTACGGAAGGTGGCCAGAGGGACTGGCCAGGAACCCTG | + |
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Preference number: 1 (lower is better) Translates to: WPGSHAPPRASHALL*SSTEGGQRDWPGTL Trigger: CAGGGTTCCTGGCCAGTCCCTCTGGCCACCTTCCGTAGAGGATCACAGCAGAGCGTGAGATGCCCTCGGTGGGGCATGACTGCCTGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR GCA 90 bp | TGGGCCTGGTGCTGGTGTGATTCGGAAGCAGCCTGGGCTCCAGCCTaGAGGCACTGTCTGATCCCCACAGGTCCTGGGAACTGGGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: WAWCWCDSEAAWAPA*RHCLIPTGPGNWAV Trigger: CACTGCCCAGTTCCCAGGACCTGTGGGGATCAGACAGTGCCTGCAGGCTGGAGCCCAGGCTGCTTCCGAATCACACCAGCACCAGGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR GCA 90 bp | GCAGATGGCCAGGCAGTCATGCCCCACCGAGGGCATCTCACGCTCTaGTGTGATCCTCTACGGAAGGTGGCCAGAGGGACTGGCCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: ADGQAVMPHRGHLTL*CDPLRKVARGTGQE Trigger: TTCCTGGCCAGTCCCTCTGGCCACCTTCCGTAGAGGATCACAGCAGAGCGTGAGATGCCCTCGGTGGGGCATGACTGCCTGGCCATCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR TCA 90 bp | TGGCAGGGATGGGTAGTGGGACGTTGGGCAGAGGCATCACAGCCATaGGAGCAGATGGCCAGGCAGTCATGCCCCACCGAGGGCATCTCA | + |
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Preference number: 1 (lower is better) Translates to: WQGWVVGRWAEASQP*EQMARQSCPTEGIS Trigger: TGAGATGCCCTCGGTGGGGCATGACTGCCTGGCCATCTGCTCTCATGGCTGTGATGCCTCTGCCCAACGTCCCACTACCCATCCCTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR CCA 90 bp | AGCCTGGGCTCCAGCCTGCAGGCACTGTCTGATCCCCACAGGTCCTaGGAACTGGGCAGTGTCAGCTCAGATCCCCTGCTCACACTCTGT | + |
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Preference number: 1 (lower is better) Translates to: SLGSSLQALSDPHRS*ELGSVSSDPLLTLC Trigger: ACAGAGTGTGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCTGTGGGGATCAGACAGTGCCTGCAGGCTGGAGCCCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR CCA 90 bp | GCTCCAGCCTGCAGGCACTGTCTGATCCCCACAGGTCCTGGGAACTaGGCAGTGTCAGCTCAGATCCCCTGCTCACACTCTGTCATGCCT | + |
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Preference number: 1 (lower is better) Translates to: APACRHCLIPTGPGN*AVSAQIPCSHSVMP Trigger: AGGCATGACAGAGTGTGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCTGTGGGGATCAGACAGTGCCTGCAGGCTGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR GCA 90 bp | GGCAGGTGTCCTCTCTACCTGGAGCACCAAGGTCCTTGTCCCAGGTaGCTGACCTCTGTCACTCTAGGTCCTGTGGTATTGCTCTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: GRCPLYLEHQGPCPR*LTSVTLGPVVLLWG Trigger: CCCCCAGAGCAATACCACAGGACCTAGAGTGACAGAGGTCAGGCACCTGGGACAAGGACCTTGGTGCTCCAGGTAGAGAGGACACCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR GCA 90 bp | TGGTGTTGGAGGCCCCAGGCTCTAGAAGACACAAGGTCCTGTGCCTaGTTCCAGAGGGCAGGTGTCCTCTCTACCTGGAGCACCAAGGTC | + |
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Preference number: 1 (lower is better) Translates to: WCWRPQALEDTRSCA*FQRAGVLSTWSTKV Trigger: GACCTTGGTGCTCCAGGTAGAGAGGACACCTGCCCTCTGGAAGCAGGCACAGGACCTTGTGTCTTCTAGAGCCTGGGGCCTCCAACACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR TCA 90 bp | ACCTACCATCAACCCTATGCATGCACGCATGCACCCACAGCTAGGTaGGTGATGTCACCATCGGCTTCTGGTGTTGGAGGCCCCAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: TYHQPYACTHAPTAR*VMSPSASGVGGPRL Trigger: GAGCCTGGGGCCTCCAACACCAGAAGCCGATGGTGACATCACTCACCTAGCTGTGGGTGCATGCGTGCATGCATAGGGTTGATGGTAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR TCA 90 bp | ACCATCAACCCTATGCATGCACGCATGCACCCACAGCTAGGTGAGTaGTGTCACCATCGGCTTCTGGTGTTGGAGGCCCCAGGCTCTAGA | + |
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Preference number: 1 (lower is better) Translates to: TINPMHARMHPQLGE*CHHRLLVLEAPGSR Trigger: TCTAGAGCCTGGGGCCTCCAACACCAGAAGCCGATGGTGACATCACTCACCTAGCTGTGGGTGCATGCGTGCATGCATAGGGTTGATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR CCA 90 bp | AGAACAGACCATGGCTGGGGGTATGAGGGCCCCAACGCTGAAATTTaGCTGTCATGTGACCTCAGGCAAGGCATCCTCGTCTCTGGGCAT | + |
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Preference number: 1 (lower is better) Translates to: RTDHGWGYEGPNAEI*LSCDLRQGILVSGH Trigger: ATGCCCAGAGACGAGGATGCCTTGCCTGAGGTCACATGACAGCCAAATTTCAGCGTTGGGGCCCTCATACCCCCAGCCATGGTCTGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR CCA 90 bp | TCATGCCTCCTCATTCATGACGTGTTATCTGCGGTCACACACGTGTaGCTCCTGCCCTTAGCAGATAAGCACACTCATGGTGACCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: SCLLIHDVLSAVTHV*LLPLADKHTHGDLH Trigger: GTGCAGGTCACCATGAGTGTGCTTATCTGCTAAGGGCAGGAGCCACACGTGTGTGACCGCAGATAACACGTCATGAATGAGGAGGCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGTGCTGGCTGTGGGCAGGGAGGCCACCCTGTCCTCTaGGCCGGGGCTCCTTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: EGAQCWCLTGCCAGCGQGGHPVL*AGAPWA Trigger: GGCCCAAGGAGCCCCGGCCCAGAGGACAGGGTGGCC...TCCCTGCCCACAGCCAGCACAGCACCCTGTGAGACACCAGCACTGAGCCCCCTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGTGCTGGCTGTGGGCAGGGAGCCTGGGCTCCAGCCTaGAGGCACTGTCTGATCCCC | + |
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Preference number: 2 (lower is better) Translates to: EGAQCWCLTGCCAGCGQGAWAPA*RHCLIP Trigger: GGGGATCAGACAGTGCCTGCAGGCTGGAGCCCAGGC...TCCCTGCCCACAGCCAGCACAGCACCCTGTGAGACACCAGCACTGAGCCCCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR CAA 90 bp | GTGGCCCTGCCCTCCAAAGTAGGAAGGAGTCCCGGACCTGAGGTATaGCCATGGTGGGTTCACCCAGGCTGGGCAGTGGGCCTGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VALPSKVGRSPGPEV*PWWVHPGWAVGLVL Trigger: CAGCACCAGGCCCACTGCCCAGCCTGGGTGAACCCACCATGGCAATACCTCAGGTCCGGGACTCCTTCCTACTTTGGAGGGCAGGGCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGTGCTGGCTGTGGGCAGGGACCGGACCTGAGGTATTaGCATGGTGGGTTCACCCAG | + |
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Preference number: 2 (lower is better) Translates to: EGAQCWCLTGCCAGCGQGPDLRY*HGGFTQ Trigger: CTGGGTGAACCCACCATGGCAATACCTCAGGTCCGG...TCCCTGCCCACAGCCAGCACAGCACCCTGTGAGACACCAGCACTGAGCCCCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCCTGAATTATTGCAGAAGGGAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGGAGCCAGGCAGAGGCTaGAGGTGGCCCTGCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: APELLQKGGGSVLVSHRVEPGRG*RWPCPP Trigger: TGGAGGGCAGGGCCACCTGCAGCCTCTGCCTGGCTC...CACCCTGTGAGACACCAGCACTGAGCCCCCTCCCTTCTGCAATAATTCAGGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR CCA 90 bp | GGTAGTGGGACGTTGGGCAGAGGCATCACAGCCATGAGAGCAGATGGCCAGGCATGGGTTCACCCAGGCTaGGCAGTGGGCCTGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: GSGTLGRGITAMRADGQAWVHPG*AVGLVL Trigger: CAGCACCAGGCCCACTGCCCAGCCTGGGTGAACCCA...TGCCTGGCCATCTGCTCTCATGGCTGTGATGCCTCTGCCCAACGTCCCACTACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGACAAGGTGTCCCCACCCCTCGTGTCCTGACCATGTTTCCCACTTCCATTGGGCCGGGGCTCCTTaGGCCCTGCCTCCCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: WKTRCPHPSCPDHVSHFHWAGAP*ALPPPG Trigger: TCCTGGGGGAGGCAGGGCCCAAGGAGCCCCGGCCCA...ATGGAAGTGGGAAACATGGTCAGGACACGAGGGGTGGGGACACCTTGTCTTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR CCA 90 bp | GGTTATCAGCCTGTGGCGGTGAGCTTCCCAGGCCCCTCCCATCCTAGCAGTCTGGATCCCCACAGGTCCTaGGAACTGGGCAGTGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: GYQPVAVSFPGPSHPSSLDPHRS*ELGSVS Trigger: GCTGACACTGCCCAGTTCCCAGGACCTGTGGGGATC...CAGACTGCTAGGATGGGAGGGGCCTGGGAAGCTCACCGCCACAGGCTGATAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR GCA 90 bp | CCACAGGTCCTGGGAACTGGGCAGTGTCAGCTCAGATCCCCTGCTCACACTCTGAGACACAAGGTCCTGTaGCTGCTTCCAGAGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PQVLGTGQCQLRSPAHTLRHKVL*LLPEGR Trigger: CCTGCCCTCTGGAAGCAGGCACAGGACCTTGTGTCT...CAGAGTGTGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGTGCTGGCTGTGGGCAGGGAGCTCACACTCTGTCATaGCTCCTCATTCATGACGTG | + |
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Preference number: 2 (lower is better) Translates to: EGAQCWCLTGCCAGCGQGAHTLS*LLIHDV Trigger: CACGTCATGAATGAGGAGGCATGACAGAGTGTGAGC...TCCCTGCCCACAGCCAGCACAGCACCCTGTGAGACACCAGCACTGAGCCCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR TCA 90 bp | CCACAGGTCCTGGGAACTGGGCAGTGTCAGCTCAGATCCCCTGCTCACACTCTGCCACAGCTAGGTGAGTaGTGTCACCATCGGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: PQVLGTGQCQLRSPAHTLPQLGE*CHHRLL Trigger: CAGAAGCCGATGGTGACATCACTCACCTAGCTGTGG...CAGAGTGTGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR GCA 90 bp | TCACGCTCTGCTGTGATCCTCTACGGAAGGTGGCCAGAGGGACTGGCCAGGAACGGTCCTTGTCCCAGGTaGCTGACCTCTGTCACTCTA | + |
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Preference number: 2 (lower is better) Translates to: SRSAVILYGRWPEGLARNGPCPR*LTSVTL Trigger: TAGAGTGACAGAGGTCAGGCACCTGGGACAAGGACC...GTTCCTGGCCAGTCCCTCTGGCCACCTTCCGTAGAGGATCACAGCAGAGCGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR CCA 90 bp | GGTTATCAGCCTGTGGCGGTGAGCTTCCCAGGCCCCTCCCATCCTAGCAGTCTGTGGTATAGGAAGGGGTaGGTTTGGGGCTTGAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: GYQPVAVSFPGPSHPSSLWYRKG*VWGLRV Trigger: GACTCTCAAGCCCCAAACCCACCCCTTCCTATACCA...CAGACTGCTAGGATGGGAGGGGCCTGGGAAGCTCACCGCCACAGGCTGATAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCTCATTCATGACGTGTTATCTGCGGTCACACACGTGTGGCTCCTGCCCTGCACCCACAGCTAGGTaGGTGATGTCACCATCGGCT | + |
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Preference number: 2 (lower is better) Translates to: ASSFMTCYLRSHTCGSCPAPTAR*VMSPSA Trigger: AGCCGATGGTGACATCACTCACCTAGCTGTGGGTGC...AGGGCAGGAGCCACACGTGTGTGACCGCAGATAACACGTCATGAATGAGGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGAATTATTGCAGAAGGGAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGTGGGGCTTGAGAGTCTaGCCCATGCTCCTGTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: PELLQKGGGSVLVSHRVLWGLRV*PMLLFP Trigger: TGGGAACAGGAGCATGGGGCAGACTCTCAAGCCCCA...CAGCACCCTGTGAGACACCAGCACTGAGCCCCCTCCCTTCTGCAATAATTCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR TCA 90 bp | CTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGCACCTGCCTGCAGGCACTGTCTaGTCCCCACAGGTCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LHSTIIYRSAGAGSARHLPAGTV*SPQVLG Trigger: TCCCAGGACCTGTGGGGATCAGACAGTGCCTGCAGG...CAGGTGCCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR CCA 90 bp | GACCTCAGGCAAGGCATCCTCGTCTCTGGGCATTACCTATATGGTATAGGAAGGCAGTGGGCCTGGTGCTaGTGTGATTCGGAAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: DLRQGILVSGHYLYGIGRQWAWC*CDSEAA Trigger: GGCTGCTTCCGAATCACACCAGCACCAGGCCCACTG...CCTTCCTATACCATATAGGTAATGCCCAGAGACGAGGATGCCTTGCCTGAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR TCA 90 bp | CTGATCCCCACAGGTCCTGGGAACTGGGCAGTGTCAGCTCAGATCCCCTGCTCACGGGGAACAGAGACATaGTTACACATTGTTTCCATC | + |
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Preference number: 2 (lower is better) Translates to: LIPTGPGNWAVSAQIPCSRGTET*LHIVSI Trigger: GATGGAAACAATGTGTAATCATGTCTCTGTTCCCCG...TGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCTGTGGGGATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR CCA 90 bp | CTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGCACCTGGGTGGCCAGAGGGACTaGCCAGGAACCCTGTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: LHSTIIYRSAGAGSARHLGGQRD*PGTLFS Trigger: GGAAAACAGGGTTCCTGGCCAGTCCCTCTGGCCACC...CAGGTGCCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGAATTATTGCAGAAGGGAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGGATATTTACATACCCTaGTGGGCCGTAAGGGGGTTA | + |
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Preference number: 2 (lower is better) Translates to: PELLQKGGGSVLVSHRVLDIYIP*WAVRGL Trigger: TAACCCCCTTACGGCCCACCAGGGTATGTAAATATC...CAGCACCCTGTGAGACACCAGCACTGAGCCCCCTCCCTTCTGCAATAATTCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR TCA 90 bp | GCTCGGCTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGATGCCTCCTCATTCATaGCGTGTTATCTGCGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: ARLHSTIIYRSAGAGSARMPPHS*RVICGH Trigger: GTGACCGCAGATAACACGTCATGAATGAGGAGGCAT...CCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAGCCGAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR CCA 90 bp | CTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGCACCTGCCCAACGCTGAAATTTaGCTGTCATGTGACCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LHSTIIYRSAGAGSARHLPNAEI*LSCDLR Trigger: CCTGAGGTCACATGACAGCCAAATTTCAGCGTTGGG...CAGGTGCCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR CCA 90 bp | GCTCGGCTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGATTTACATACCCTGGTaGGCCGTAAGGGGGTTATCA | + |
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Preference number: 2 (lower is better) Translates to: ARLHSTIIYRSAGAGSARIYIPW*AVRGLS Trigger: TGATAACCCCCTTACGGCCCACCAGGGTATGTAAAT...CCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAGCCGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGTGGGCCGTAAGGGGGTTATCAGCCTGTGGCGGTGAGCTTCCCAGGCCCTCAGCTGCCAGGACCTaGTGGGGCACCCCCATACCT | + |
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Preference number: 3 (lower is better) Translates to: PWWAVRGLSACGGELPRPSAART*WGTPIP Trigger: AGGTATGGGGGTGCCCCACAAGGTCCTGGCAGCTGA...GGGCCTGGGAAGCTCACCGCCACAGGCTGATAACCCCCTTACGGCCCACCAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGTGGGCCGTAAGGGGGTTATCAGCCTGTGGCGGTGAGCTTCCCAGGCCCGGGTGGGTTTGGGGCTaGAGAGTCTGCCCCATGCTC | + |
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Preference number: 3 (lower is better) Translates to: PWWAVRGLSACGGELPRPGWVWG*RVCPML Trigger: GAGCATGGGGCAGACTCTCAAGCCCCAAACCCACCC...GGGCCTGGGAAGCTCACCGCCACAGGCTGATAACCCCCTTACGGCCCACCAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR TCA 72 bp | CTGGTGGGCCGTAAGGGGGTTATCAGCCTGTGGCGGTaGGCTTCCCAGGCCCCTCCCATCCTAGCAGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: LVGRKGVISLWR*ASQAPPILAVW Trigger: CCAGACTGCTAGGATGGGAGGGGCCTGGGAAGCTCACCGCCACAGGCTGATAACCCCCTTACGGCCCACCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR-3UTR CAA 90 bp | GAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGTGCTGGCTGTGGGCAGGGAATGGGTAGTGGGACGTaGGGCAGAGGCATCACAGCC | + |
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Preference number: 3 (lower is better) Translates to: EGAQCWCLTGCCAGCGQGMGSGT*GRGITA Trigger: GGCTGTGATGCCTCTGCCCAACGTCCCACTACCCAT...TCCCTGCCCACAGCCAGCACAGCACCCTGTGAGACACCAGCACTGAGCCCCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR TCA 72 bp | GGCCCTGCCCTCCAAAGTAGGAAGGAGTCCCGGACCTaGGGTATTGCCATGGTGGGTTCACCCAGGCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: GPALQSRKESRT*GIAMVGSPRLG Trigger: GCCCAGCCTGGGTGAACCCACCATGGCAATACCTCAGGTCCGGGACTCCTTCCTACTTTGGAGGGCAGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR CCA 72 bp | GTAGGAAGGAGTCCCGGACCTGAGGTATTGCCATGGTaGGTTCACCCAGGCTGGGCAGTGGGCCTGGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VGRSPGPEVLPW*VHPGWAVGLVL Trigger: CAGCACCAGGCCCACTGCCCAGCCTGGGTGAACCCACCATGGCAATACCTCAGGTCCGGGACTCCTTCCTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR CCA 72 bp | TGCTCCTGTTCCCAGCATGGGCAGGGGTGGCAGGGATaGGTAGTGGGACGTTGGGCAGAGGCATCACAGCCA | + |
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Preference number: 3 (lower is better) Translates to: CSCSQHGQGWQG*VVGRWAEASQP Trigger: TGGCTGTGATGCCTCTGCCCAACGTCCCACTACCCATCCCTGCCACCCCTGCCCATGCTGGGAACAGGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR TCA 72 bp | TGGGTAGTGGGACGTTGGGCAGAGGCATCACAGCCATaGGAGCAGATGGCCAGGCAGTCATGCCCCACCGAG | + |
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Preference number: 3 (lower is better) Translates to: WVVGRWAEASQP*EQMARQSCPTE Trigger: CTCGGTGGGGCATGACTGCCTGGCCATCTGCTCTCATGGCTGTGATGCCTCTGCCCAACGTCCCACTACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR GCA 72 bp | TGCTGGTGTGATTCGGAAGCAGCCTGGGCTCCAGCCTaGAGGCACTGTCTGATCCCCACAGGTCCTGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: CWCDSEAAWAPA*RHCLIPTGPGN Trigger: GTTCCCAGGACCTGTGGGGATCAGACAGTGCCTGCAGGCTGGAGCCCAGGCTGCTTCCGAATCACACCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| 3UTR CCA 72 bp | TCCAGCCTGCAGGCACTGTCTGATCCCCACAGGTCCTaGGAACTGGGCAGTGTCAGCTCAGATCCCCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SSLQALSDPHRS*ELGSVSSDPLL Trigger: GAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCTGTGGGGATCAGACAGTGCCTGCAGGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR GCA 72 bp | AGGCCCCAGGCTCTAGAAGACACAAGGTCCTGTGCCTaGTTCCAGAGGGCAGGTGTCCTCTCTACCTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RPQALEDTRSCA*FQRAGVLSTWS Trigger: GCTCCAGGTAGAGAGGACACCTGCCCTCTGGAAGCAGGCACAGGACCTTGTGTCTTCTAGAGCCTGGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR CCA 72 bp | AAAGTAGGAAGGAGTCCCGGACCTGAGGTATTGCCATaGTGGGTTCACCCAGGCTGGGCAGTGGGCCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KVGRSPGPEVLP*WVHPGWAVGLV Trigger: CACCAGGCCCACTGCCCAGCCTGGGTGAACCCACCATGGCAATACCTCAGGTCCGGGACTCCTTCCTACTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR GCA 72 bp | AAGCCCCTGAATTATTGCAGAAGGGAGGGGGCTCAGTaGTGGTGTCTCACAGGGTGCTGTGCTGGCTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KPLNYCRREGAQ*WCLTGCCAGCG Trigger: CCCACAGCCAGCACAGCACCCTGTGAGACACCAGCACTGAGCCCCCTCCCTTCTGCAATAATTCAGGGGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR CCA 72 bp | TGCAGGCACTGTCTGATCCCCACAGGTCCTGGGAACTaGGCAGTGTCAGCTCAGATCCCCTGCTCACACTCT | + |
|
Preference number: 3 (lower is better) Translates to: CRHCLIPTGPGN*AVSAQIPCSHS Trigger: AGAGTGTGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCTGTGGGGATCAGACAGTGCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR TCA 72 bp | CCTATGCATGCACGCATGCACCCACAGCTAGGTGAGTaGTGTCACCATCGGCTTCTGGTGTTGGAGGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PMHARMHPQLGE*CHHRLLVLEAP Trigger: TGGGGCCTCCAACACCAGAAGCCGATGGTGACATCACTCACCTAGCTGTGGGTGCATGCGTGCATGCATAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR CCA 72 bp | CATGGCTGGGGGTATGAGGGCCCCAACGCTGAAATTTaGCTGTCATGTGACCTCAGGCAAGGCATCCTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: HGWGYEGPNAEI*LSCDLRQGILV Trigger: GACGAGGATGCCTTGCCTGAGGTCACATGACAGCCAAATTTCAGCGTTGGGGCCCTCATACCCCCAGCCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR CCA 72 bp | TATATAGAAGCGCAGGAGCTGGCAGCGCACGGCACCTaGGTGGGGCTGAAGCCCCTGAATTATTGCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: YIEAQELAAHGT*VGLKPLNYCRR Trigger: CCTTCTGCAATAATTCAGGGGCTTCAGCCCCACCCAGGTGCCGTGCGCTGCCAGCTCCTGCGCTTCTATATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTCGGCTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGGGAGCACCAAGGTCCTaGTCCCAGGTGCCTGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: ARLHSTIIYRSAGAGSARGAPRS*SQVPDL Trigger: GAGGTCAGGCACCTGGGACAAGGACCTTGGTGCTCC...CCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAGCCGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR TCA 72 bp | CAACCCTATGCATGCACGCATGCACCCACAGCTAGGTaGGTGATGTCACCATCGGCTTCTGGTGTTGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QPYACTHAPTAR*VMSPSASGVGG Trigger: GCCTCCAACACCAGAAGCCGATGGTGACATCACTCACCTAGCTGTGGGTGCATGCGTGCATGCATAGGGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR TCA 72 bp | ATCCCCTGCTCACACTCTGTCATGCCTCCTCATTCATaGCGTGTTATCTGCGGTCACACACGTGTGGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: IPCSHSVMPPHS*RVICGHTRVAP Trigger: AGGAGCCACACGTGTGTGACCGCAGATAACACGTCATGAATGAGGAGGCATGACAGAGTGTGAGCAGGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR GCA 72 bp | CAGTGTCAGCTCAGATCCCCTGCTCACACTCTGTCATaGCTCCTCATTCATGACGTGTTATCTGCGGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: QCQLRSPAHTLS*LLIHDVLSAVT Trigger: TGTGACCGCAGATAACACGTCATGAATGAGGAGGCATGACAGAGTGTGAGCAGGGGATCTGAGCTGACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAGACAAGGTGTCCCCACCCCTCGTGTCCTGACCATGTTTCCCACTTCCATAGACATGATTACACATaGTTTCCATCAGCTGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: WKTRCPHPSCPDHVSHFHRHDYT*FPSAAR Trigger: CCTGGCAGCTGATGGAAACAATGTGTAATCATGTCT...ATGGAAGTGGGAAACATGGTCAGGACACGAGGGGTGGGGACACCTTGTCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR CCA 72 bp | CTCATTCATGACGTGTTATCTGCGGTCACACACGTGTaGCTCCTGCCCTTAGCAGATAAGCACACTCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: LIHDVLSAVTHV*LLPLADKHTHG Trigger: ACCATGAGTGTGCTTATCTGCTAAGGGCAGGAGCCACACGTGTGTGACCGCAGATAACACGTCATGAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR-3UTR CAA 90 bp | CTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGCACCTGAGCTTTGCATGTGCTTaGAAGACCATTTTTGCATTG | + |
|
Preference number: 3 (lower is better) Translates to: LHSTIIYRSAGAGSARHLSFACA*KTIFAL Trigger: CAATGCAAAAATGGTCTTCAAAGCACATGCAAAGCT...CAGGTGCCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR TCA 90 bp | GAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGTGCTGGCTGTGGGCAGGGAGCGGCCACAGCCTGCTaGGGTGCGGGCTCGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGAQCWCLTGCCAGCGQGAATAC*GAGSDL Trigger: CAGGTCCGAGCCCGCACCTCAGCAGGCTGTGGCCGC...TCCCTGCCCACAGCCAGCACAGCACCCTGTGAGACACCAGCACTGAGCCCCCTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGGTGGGCCGTAAGGGGGTTATCAGCCTGTGGCGGTGAGCTTCCCAGGCCCCACAGCCTGCTGAGGTaGGGGCTCGGACCTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PWWAVRGLSACGGELPRPHSLLR*GLGPGT Trigger: TGTTCCAGGTCCGAGCCCGCACCTCAGCAGGCTGTG...GGGCCTGGGAAGCTCACCGCCACAGGCTGATAACCCCCTTACGGCCCACCAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGTGCTGGCTGTGGGCAGGGAAGAGTGGCTGTGGGGTaGGCATCGGGCGCACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGAQCWCLTGCCAGCGQGRVAVG*ASGAQL Trigger: CAGCTGTGCGCCCGATGCCCACCCCACAGCCACTCT...TCCCTGCCCACAGCCAGCACAGCACCCTGTGAGACACCAGCACTGAGCCCCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | CTGATCCCCACAGGTCCTGGGAACTGGGCAGTGTCAGCTCAGATCCCCTGCTCATGCCGGCGGGGTCCCTaGGTGCTGCTCAGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPTGPGNWAVSAQIPCSCRRGP*VLLSWA Trigger: GGCCCAGCTGAGCAGCACCCAGGGACCCCGCCGGCA...TGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCTGTGGGGATCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR TCA 90 bp | GGTTATCAGCCTGTGGCGGTGAGCTTCCCAGGCCCCTCCCATCCTAGCAGTCTGGCCTGGTTTGAGGCCTaGCACGGTGGCGCGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GYQPVAVSFPGPSHPSSLAWFEA*HGGAGG Trigger: ACCACCCGCGCCACCGTGTCAGGCCTCAAACCAGGC...CAGACTGCTAGGATGGGAGGGGCCTGGGAAGCTCACCGCCACAGGCTGATAACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGGTGGGCCGTAAGGGGGTTATCAGCCTGTGGCGGTGAGCTTCCCAGGCCCGCAGCGGCGGCACACTaGGTTGTAGGTGATGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PWWAVRGLSACGGELPRPAAAAH*VVGDVA Trigger: AGCGACATCACCTACAACGCAGTGTGCCGCCGCTGC...GGGCCTGGGAAGCTCACCGCCACAGGCTGATAACCCCCTTACGGCCCACCAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGTGCTGGCTGTGGGCAGGGAGGCAGATCCAGACGATaGTCCGAGTGTCGTAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGAQCWCLTGCCAGCGQGGRSRR*SECRSG Trigger: CCCGCTACGACACTCGGACCATCGTCTGGATCTGCC...TCCCTGCCCACAGCCAGCACAGCACCCTGTGAGACACCAGCACTGAGCCCCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR TCA 90 bp | CTACCTGGAGCACCAAGGTCCTTGTCCCAGGTGCCTGACCTCTGTCACTCTAGGCCAGGCGACCACGGGTaGCCACACCCTCAAGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPGAPRSLSQVPDLCHSRPGDHG*PHPQGG Trigger: TCCGCCTTGAGGGTGTGGTCACCCGTGGTCGCCTGG...CCTAGAGTGACAGAGGTCAGGCACCTGGGACAAGGACCTTGGTGCTCCAGGTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | CCACAGGTCCTGGGAACTGGGCAGTGTCAGCTCAGATCCCCTGCTCACACTCTGCCACAAGCCTCACAGTaGCTCAGGGCCCAGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQVLGTGQCQLRSPAHTLPQASQ*LRAQGQ Trigger: CTGCCCCTGGGCCCTGAGCCACTGTGAGGCTTGTGG...CAGAGTGTGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCTGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | CCACAGGTCCTGGGAACTGGGCAGTGTCAGCTCAGATCCCCTGCTCACACTCTGCGGATCACCACCACCTaGGACGGGGCTGCCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQVLGTGQCQLRSPAHTLRITTT*DGAAWF Trigger: GAACCAGGCAGCCCCGTCCCAGGTGGTGGTGATCCG...CAGAGTGTGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCTGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR TCA 90 bp | TCACGCTCTGCTGTGATCCTCTACGGAAGGTGGCCAGAGGGACTGGCCAGGAACCATGAGCGGGATACGTaGGCCAGCCCCAGTCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SRSAVILYGRWPEGLARNHERDT*ASPSLR Trigger: ACGGAGACTGGGGCTGGCTCACGTATCCCGCTCATG...GTTCCTGGCCAGTCCCTCTGGCCACCTTCCGTAGAGGATCACAGCAGAGCGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR TCA 90 bp | CTACCTGGAGCACCAAGGTCCTTGTCCCAGGTGCCTGACCTCTGTCACTCTAGGCTGGTCCCCGGGGGCTaGCTTGTAGAAGCCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPGAPRSLSQVPDLCHSRLVPGG*LVEAQL Trigger: GAGCTGGGCTTCTACAAGTCAGCCCCCGGGGACCAG...CCTAGAGTGACAGAGGTCAGGCACCTGGGACAAGGACCTTGGTGCTCCAGGTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR GCA 90 bp | CTGATCCCCACAGGTCCTGGGAACTGGGCAGTGTCAGCTCAGATCCCCTGCTCACGCCTCCGAGAAGGCTaGCAGGTTGCGTACCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIPTGPGNWAVSAQIPCSRLREG*QVAYHG Trigger: GCCATGGTACGCAACCTGGCAGCCTTCTCGGAGGCG...TGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCTGTGGGGATCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR GCA 90 bp | CTGGAGCACCAAGGTCCTTGTCCCAGGTGCCTGACCTCTGTCACTCTAGGTCCTCAGCAGGCTGGCCTGTaGCAGGCTTGTCTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LEHQGPCPRCLTSVTLGPQQAGL*QACLLR Trigger: CCGCAGCAGACAAGCCTGGCACAGGCCAGCCTGCTG...AGGACCTAGAGTGACAGAGGTCAGGCACCTGGGACAAGGACCTTGGTGCTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | CCTGAATTATTGCAGAAGGGAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGCATCGGGCGCACAGCTaGTCCCCGGGGGCTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: PELLQKGGGSVLVSHRVLHRAHS*SPGADL Trigger: CAAGTCAGCCCCCGGGGACCAGCTGTGCGCCCGATG...CAGCACCCTGTGAGACACCAGCACTGAGCCCCCTCCCTTCTGCAATAATTCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTCCATCAGCTGCCAGGACCTTGTGGGGCACCCCCATACCTACCATCAACCGCAGGGGTGGCAGAGTaGCTGTGGGGTGGGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: CFHQLPGPCGAPPYLPSTAGVAE*LWGGHR Trigger: CCGATGCCCACCCCACAGCCACTCTGCCACCCCTGC...GGTTGATGGTAGGTATGGGGGTGCCCCACAAGGTCCTGGCAGCTGATGGAAACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | CTGATCCCCACAGGTCCTGGGAACTGGGCAGTGTCAGCTCAGATCCCCTGCTCATCCACCTCCATGGCCTaGCTGAAGCGGCCACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LIPTGPGNWAVSAQIPCSSTSMA*LKRPQP Trigger: AGGCTGTGGCCGCTTCAGCCAGGCCATGGAGGTGGA...TGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCTGTGGGGATCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | GGTAGTGGGACGTTGGGCAGAGGCATCACAGCCATGAGAGCAGATGGCCAGGCATGTCGTAGCGGGGCCTaGGTTTCCCGGTCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGTLGRGITAMRADGQACRSGA*VSRSPP Trigger: AGGTGGAGACCGGGAAACCCAGGCCCCGCTACGACA...TGCCTGGCCATCTGCTCTCATGGCTGTGATGCCTCTGCCCAACGTCCCACTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCTGAATTATTGCAGAAGGGAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGGGTCAAAGCAGCTCCTaGCGAAGGCAGGGGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: APELLQKGGGSVLVSHRVGQSSS*RRQGVG Trigger: GCCCACCCCCTGCCTTCGCCAGGAGCTGCTTTGACC...CACCCTGTGAGACACCAGCACTGAGCCCCCTCCCTTCTGCAATAATTCAGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR CAA 72 bp | CCCTCCAAAGTAGGAAGGAGTCCCGGACCTGAGGTATaGCCATGGTGGGTTCACCCAGGCTGGGCAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSKVGRSPGPEV*PWWVHPGWAVG Trigger: GCCCACTGCCCAGCCTGGGTGAACCCACCATGGCAATACCTCAGGTCCGGGACTCCTTCCTACTTTGGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR TCA 90 bp | GGGCACCCCCATACCTACCATCAACCCTATGCATGCACGCATGCACCCACAGCTTTCCTGCCACAGGAGTaGCACGCTGGTCTGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHPHTYHQPYACTHAPTAFLPQE*HAGLPS Trigger: GCTGGGCAGACCAGCGTGTCACTCCTGTGGCAGGAA...AGCTGTGGGTGCATGCGTGCATGCATAGGGTTGATGGTAGGTATGGGGGTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR GCA 90 bp | GGTAGTGGGACGTTGGGCAGAGGCATCACAGCCATGAGAGCAGATGGCCAGGCACACCTGGGACGGGGCTaGCTGGTTCGTGGTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSGTLGRGITAMRADGQAHLGRG*LVRGDV Trigger: AACATCACCACGAACCAGGCAGCCCCGTCCCAGGTG...TGCCTGGCCATCTGCTCTCATGGCTGTGATGCCTCTGCCCAACGTCCCACTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR GCA 90 bp | TACACATTGTTTCCATCAGCTGCCAGGACCTTGTGGGGCACCCCCATACCTACCTGCCCAGCCCGCTCCTaGCGGATCACCACCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTLFPSAARTLWGTPIPTCPARS*RITTTW Trigger: CCAGGTGGTGGTGATCCGGCAGGAGCGGGCTGGGCA...GGTAGGTATGGGGGTGCCCCACAAGGTCCTGGCAGCTGATGGAAACAATGTGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | CCTGAATTATTGCAGAAGGGAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGGGCTCTCTTGTGTGCTaGCCCCCAGGTCGCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PELLQKGGGSVLVSHRVLGSLVC*PPGRGQ Trigger: CTGACCGCGACCTGGGGGCCAGCACACAAGAGAGCC...CAGCACCCTGTGAGACACCAGCACTGAGCCCCCTCCCTTCTGCAATAATTCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | TCACGCTCTGCTGTGATCCTCTACGGAAGGTGGCCAGAGGGACTGGCCAGGAACGAGTGCCGCACACACTaGCCTCGAACCTCAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRSAVILYGRWPEGLARNECRTH*PRTSTS Trigger: GCTGGTTGAGGTTCGAGGCCAGTGTGTGCGGCACTC...GTTCCTGGCCAGTCCCTCTGGCCACCTTCCGTAGAGGATCACAGCAGAGCGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAGACAAGGTGTCCCCACCCCTCGTGTCCTGACCATGTTTCCCACTTCCATGCAGGCTGCCGATGGTaGGTCCAAGGCCGCGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WKTRCPHPSCPDHVSHFHAGCRW*VQGRAV Trigger: TACCGCGCGGCCTTGGACCCACCATCGGCAGCCTGC...ATGGAAGTGGGAAACATGGTCAGGACACGAGGGGTGGGGACACCTTGTCTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | CTACCTGGAGCACCAAGGTCCTTGTCCCAGGTGCCTGACCTCTGTCACTCTAGGTGGCCACCAGCAGGCTaGCCTGTGCCAGGCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGAPRSLSQVPDLCHSRWPPAG*PVPGLS Trigger: AGACAAGCCTGGCACAGGCCAGCCTGCTGGTGGCCA...CCTAGAGTGACAGAGGTCAGGCACCTGGGACAAGGACCTTGGTGCTCCAGGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | CATGGTGACCTGCACACGTCTGTGCTGGGGCCTGACGGGGAACAGAGACATGATAGCGCCCCATTCGGATaGAGTCCAGCCAGTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HGDLHTSVLGPDGEQRHDSAPFG*SPASPP Trigger: TGGGGGACTGGCTGGACTCCATCCGAATGGGGCGCT...ATCATGTCTCTGTTCCCCGTCAGGCCCCAGCACAGACGTGTGCAGGTCACCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR TCA 90 bp | GACGTGTTATCTGCGGTCACACACGTGTGGCTCCTGCCCTTAGCAGATAAGCACGCCAGTCCCCCACTGTaGGGTCCCCGTTCCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: DVLSAVTHVWLLPLADKHASPPL*GPRSHF Trigger: GAAGTGGGAACGGGGACCTCACAGTGGGGGACTGGC...GTGCTTATCTGCTAAGGGCAGGAGCCACACGTGTGTGACCGCAGATAACACGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR GCA 90 bp | GCCTCCTCATTCATGACGTGTTATCTGCGGTCACACACGTGTGGCTCCTGCCCTTCGCGCTCTTCCGAGTaGCGCACACACTGGCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ASSFMTCYLRSHTCGSCPSRSSE*RTHWPR Trigger: TCGAGGCCAGTGTGTGCGGCACTCGGAAGAGCGCGA...AGGGCAGGAGCCACACGTGTGTGACCGCAGATAACACGTCATGAATGAGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR GCA 90 bp | GGGCACCCCCATACCTACCATCAACCCTATGCATGCACGCATGCACCCACAGCTGGCTGCTCTGGTTCCTaGCACAGGAGTGACACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GHPHTYHQPYACTHAPTAGCSGS*HRSDTL Trigger: CAGCGTGTCACTCCTGTGGCAGGAACCAGAGCAGCC...AGCTGTGGGTGCATGCGTGCATGCATAGGGTTGATGGTAGGTATGGGGGTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | CATGGTGACCTGCACACGTCTGTGCTGGGGCCTGACGGGGAACAGAGACATGATACACGCACTTGCCGATaGGCACCAGCCATTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HGDLHTSVLGPDGEQRHDTRTCR*APAIRP Trigger: AGGGCGAATGGCTGGTGCCCATCGGCAAGTGCGTGT...ATCATGTCTCTGTTCCCCGTCAGGCCCCAGCACAGACGTGTGCAGGTCACCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGTTGGAGGCCCCAGGCTCTAGAAGACACAAGGTCCTGTGCCTGCTTCCAGTGGGACGGGGCTGCCTaGTTCGTGGTGATGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: WCWRPQALEDTRSCACFQWDGAA*FVVMLT Trigger: GGTCAACATCACCACGAACCAGGCAGCCCCGTCCCA...CTGGAAGCAGGCACAGGACCTTGTGTCTTCTAGAGCCTGGGGCCTCCAACACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | TGTTTCCATCAGCTGCCAGGACCTTGTGGGGCACCCCCATACCTACCATCAACCGGGCAAGAAGACAGGTaGGGGTGCCTGCCCGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CFHQLPGPCGAPPYLPSTGQEDR*GCLPVL Trigger: CAGAACGGGCAGGCACCCCCACCTGTCTTCTTGCCC...GGTTGATGGTAGGTATGGGGGTGCCCCACAAGGTCCTGGCAGCTGATGGAAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR TCA 90 bp | TGGTGTTGGAGGCCCCAGGCTCTAGAAGACACAAGGTCCTGTGCCTGCTTCCAGAATGTAGCCCAGGTCTaGGAGGTAGCGCATGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WCWRPQALEDTRSCACFQNVAQV*EVAHAS Trigger: GCTGGCATGCGCTACCTCTCAGACCTGGGCTACATT...CTGGAAGCAGGCACAGGACCTTGTGTCTTCTAGAGCCTGGGGCCTCCAACACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR GCA 90 bp | CATGGTGACCTGCACACGTCTGTGCTGGGGCCTGACGGGGAACAGAGACATGATTGCACGATGGTGAACTaGCCATCGTGGGTCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGDLHTSVLGPDGEQRHDCTMVN*PSWVLR Trigger: CCTCAGGACCCACGATGGGCAGTTCACCATCGTGCA...ATCATGTCTCTGTTCCCCGTCAGGCCCCAGCACAGACGTGTGCAGGTCACCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | GAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGTGCTGGCTGTGGGCAGGGAACGTTCCATTTACGCTaGAGATCAGGTTCACTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGAQCWCLTGCCAGCGQGTFHLR*RSGSLV Trigger: CACCAGTGAACCTGATCTCCAGCGTAAATGGAACGT...TCCCTGCCCACAGCCAGCACAGCACCCTGTGAGACACCAGCACTGAGCCCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | GCCCCTGAATTATTGCAGAAGGGAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGGTGAACTGCCCATCGTaGGTCCTGAGGAAGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: APELLQKGGGSVLVSHRVVNCPS*VLRKAS Trigger: GGATGCCTTCCTCAGGACCCACGATGGGCAGTTCAC...CACCCTGTGAGACACCAGCACTGAGCCCCCTCCCTTCTGCAATAATTCAGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR TCA 90 bp | GGGCACCCCCATACCTACCATCAACCCTATGCATGCACGCATGCACCCACAGCTACTCGTCTACCTCGTTaGTGGAGTCCCACCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GHPHTYHQPYACTHAPTATRLPR*WSPTHE Trigger: CTCATGGGTGGGACTCCATCAACGAGGTAGACGAGT...AGCTGTGGGTGCATGCGTGCATGCATAGGGTTGATGGTAGGTATGGGGGTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR GCA 90 bp | CCTGAATTATTGCAGAAGGGAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGATGATGCCGTTGGGCTaGTCTGGTTCCTGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PELLQKGGGSVLVSHRVLMMPLG*SGSCHR Trigger: CCTGTGGCAGGAACCAGAGCAGCCCAACGGCATCAT...CAGCACCCTGTGAGACACCAGCACTGAGCCCCCTCCCTTCTGCAATAATTCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR GCA 90 bp | GGGCACCCCCATACCTACCATCAACCCTATGCATGCACGCATGCACCCACAGCTAGTCCTGGAACGCCTTaGTGTAGCCACAGTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHPHTYHQPYACTHAPTASPGTP*CSHSAS Trigger: AGAGGCACTGTGGCTACAGCAAGGCGTTCCAGGACT...AGCTGTGGGTGCATGCGTGCATGCATAGGGTTGATGGTAGGTATGGGGGTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | GCCCCTGAATTATTGCAGAAGGGAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTTGGTACGTGTGGATaGGCCGGAAGGACTCGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: APELLQKGGGSVLVSHRVLGTCG*AGRTRL Trigger: TAGACGAGTCCTTCCGGCCCATCCACACGTACCAAG...CACCCTGTGAGACACCAGCACTGAGCCCCCTCCCTTCTGCAATAATTCAGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | GCCCCTGAATTATTGCAGAAGGGAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCATACTTGGTACGTGTaGATGGGCCGGAAGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: APELLQKGGGSVLVSHRVHTWYV*MGRKDS Trigger: CGAGTCCTTCCGGCCCATCCACACGTACCAAGTATG...CACCCTGTGAGACACCAGCACTGAGCCCCCTCCCTTCTGCAATAATTCAGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | GCCCCTGAATTATTGCAGAAGGGAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCACTGCAGTACATCTTaGGTGTGTCGCGCTCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: APELLQKGGGSVLVSHRVHCSTS*VCRALP Trigger: CGGAAGAGCGCGACACACCCAAGATGTACTGCAGTG...CACCCTGTGAGACACCAGCACTGAGCCCCCTCCCTTCTGCAATAATTCAGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | GCTCGGCTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGCCGGCCTGCCCGACCTaGTTCCTCATAGGTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARLHSTIIYRSAGAGSARPACPT*FLIGVG Trigger: CCCCACACCTATGAGGAACCAGGTCGGGCAGGCCGG...CCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAGCCGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | CTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGCACCTGGGCGAAGGCAGGGGGTaGGCACCTGCTGACTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHSTIIYRSAGAGSARHLGEGRG*APADCG Trigger: GCCACAGTCAGCAGGTGCCCACCCCCTGCCTTCGCC...CAGGTGCCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR TCA 90 bp | CTGGAGCACCAAGGTCCTTGTCCCAGGTGCCTGACCTCTGTCACTCTAGGTCCTATAGCACACTTCTCCTaGCTCCCCCGAGCCTATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LEHQGPCPRCLTSVTLGPIAHFS*LPRAYD Trigger: ATCATAGGCTCGGGGGAGTCAGGAGAAGTGTGCTAT...AGGACCTAGAGTGACAGAGGTCAGGCACCTGGGACAAGGACCTTGGTGCTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR TCA 90 bp | GCCCCTGAATTATTGCAGAAGGGAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGGATCAAATTGGCCCATaGTGGCTGCCTCGCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: APELLQKGGGSVLVSHRVDQIGP*WLPRSR Trigger: TCTTGAGCGAGGCAGCCATCATGGGCCAATTTGATC...CACCCTGTGAGACACCAGCACTGAGCCCCCTCCCTTCTGCAATAATTCAGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR GCA 90 bp | GCTCGGCTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGACTGGCTCTCTTGTGTaGTGGCCCCCAGGTCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARLHSTIIYRSAGAGSARTGSLV*WPPGRG Trigger: ACCGCGACCTGGGGGCCAGCACACAAGAGAGCCAGT...CCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAGCCGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR GCA 90 bp | TGGTGTTGGAGGCCCCAGGCTCTAGAAGACACAAGGTCCTGTGCCTGCTTCCAGGGAGACACCGTTGACTaGCTCGATCCAGAAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: WCWRPQALEDTRSCACFQGDTVD*LDPEGV Trigger: TACTCCTTCTGGATCGAGGCAGTCAACGGTGTCTCC...CTGGAAGCAGGCACAGGACCTTGTGTCTTCTAGAGCCTGGGGCCTCCAACACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR GCA 90 bp | CATGGTGACCTGCACACGTCTGTGCTGGGGCCTGACGGGGAACAGAGACATGATTTGGCCCATGATGGCTaGCTCGCTCAAGAAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HGDLHTSVLGPDGEQRHDLAHDG*LAQEVL Trigger: CAAGACTTCTTGAGCGAGGCAGCCATCATGGGCCAA...ATCATGTCTCTGTTCCCCGTCAGGCCCCAGCACAGACGTGTGCAGGTCACCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | CTGGAGCACCAAGGTCCTTGTCCCAGGTGCCTGACCTCTGTCACTCTAGGTCCTATGACGTTGCATACTTaGTACGTGTGGATGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LEHQGPCPRCLTSVTLGPMTLHT*YVWMGR Trigger: CCGGCCCATCCACACGTACCAAGTATGCAACGTCAT...AGGACCTAGAGTGACAGAGGTCAGGCACCTGGGACAAGGACCTTGGTGCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | GCCTCCTCATTCATGACGTGTTATCTGCGGTCACACACGTGTGGCTCCTGCCCTCCAGGTTGCGTACCATaGCGGGGCACTTCTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASSFMTCYLRSHTCGSCPPGCVP*RGTSCS Trigger: ACTACAAGAAGTGCCCCGCCATGGTACGCAACCTGG...AGGGCAGGAGCCACACGTGTGTGACCGCAGATAACACGTCATGAATGAGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | ACGTCTGTGCTGGGGCCTGACGGGGAACAGAGACATGATTACACATTGTTTCCAACAGGAGTGACACGCTaGTCTGCCCAGCCCGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSVLGPDGEQRHDYTLFPTGVTR*SAQPAP Trigger: AGGAGCGGGCTGGGCAGACCAGCGTGTCACTCCTGT...TGGAAACAATGTGTAATCATGTCTCTGTTCCCCGTCAGGCCCCAGCACAGACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | AGGTCCTGGGAACTGGGCAGTGTCAGCTCAGATCCCCTGCTCACACTCTGTCATGGCTCTGCAGAGAACTaGGTTTCTGGGAACTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSWELGSVSSDPLLTLCHGSAEN*VSGNFP Trigger: GGGGAAGTTCCCAGAAACCCAGTTCTCTGCAGAGCC...ATGACAGAGTGTGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR TCA 90 bp | AGGTCCTGGGAACTGGGCAGTGTCAGCTCAGATCCCCTGCTCACACTCTGTCATTCTGGTTGGGGCTCATaGCGTTGCATACTTGGTACG | + |
|
Preference number: 4 (lower is better) Translates to: RSWELGSVSSDPLLTLCHSGWGS*RCILGT Trigger: CGTACCAAGTATGCAACGTCATGAGCCCCAACCAGA...ATGACAGAGTGTGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR GCA 90 bp | GCTCGGCTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGGCCAGGCTTGTCTGCTaGGGGACGAAGCGAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARLHSTIIYRSAGAGSARARLVC*GTKRVP Trigger: TGGAACTCGCTTCGTCCCGCAGCAGACAAGCCTGGC...CCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAGCCGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | TCACGCTCTGCTGTGATCCTCTACGGAAGGTGGCCAGAGGGACTGGCCAGGAACCCCAGTCTCCGTGGATaGTTGATGTATCCAACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRSAVILYGRWPEGLARNPSLRG*LMYPTS Trigger: ACTTGTTGGATACATCAACCATCCACGGAGACTGGG...GTTCCTGGCCAGTCCCTCTGGCCACCTTCCGTAGAGGATCACAGCAGAGCGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | GACGTGTTATCTGCGGTCACACACGTGTGGCTCCTGCCCTTAGCAGATAAGCACTTCGGAGTGAGAGGATaGCGAGGCAGGCACCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: DVLSAVTHVWLLPLADKHFGVRG*RGRHLC Trigger: ACATAGGTGCCTGCCTCGCCATCCTCTCACTCCGAA...GTGCTTATCTGCTAAGGGCAGGAGCCACACGTGTGTGACCGCAGATAACACGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | CTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGCACCTGTGTGGGCTAGCAGGTTaGCCACCAGCAGGCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHSTIIYRSAGAGSARHLCGLAG*PPAGWP Trigger: AGGCCAGCCTGCTGGTGGCCAACCTGCTAGCCCACA...CAGGTGCCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR TCA 90 bp | GCTCGGCTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGGTAGTAGATTCGGAGTaGGAGGATGGCGAGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARLHSTIIYRSAGAGSARVVDSE*EDGEAG Trigger: GCCTGCCTCGCCATCCTCTCACTCCGAATCTACTAC...CCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAGCCGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR TCA 90 bp | TACACATTGTTTCCATCAGCTGCCAGGACCTTGTGGGGCACCCCCATACCTACCGCCTCTTCTTGCAGATaGGAAGCAAGAGGAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: YTLFPSAARTLWGTPIPTASSCR*EARGAP Trigger: TGGTGCTCCTCTTGCTTCTCATCTGCAAGAAGAGGC...GGTAGGTATGGGGGTGCCCCACAAGGTCCTGGCAGCTGATGGAAACAATGTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR GCA 90 bp | TGTTTCCATCAGCTGCCAGGACCTTGTGGGGCACCCCCATACCTACCATCAACCATTCGCCCTCAGCACTaGAGTACATCTTGGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CFHQLPGPCGAPPYLPSTIRPQH*STSWVC Trigger: ACACACCCAAGATGTACTGCAGTGCTGAGGGCGAAT...GGTTGATGGTAGGTATGGGGGTGCCCCACAAGGTCCTGGCAGCTGATGGAAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR GCA 90 bp | GACGTGTTATCTGCGGTCACACACGTGTGGCTCCTGCCCTTAGCAGATAAGCACATAGGTGTGGGGCTCTaGAGAGAACTGGGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DVLSAVTHVWLLPLADKHIGVGL*RELGFW Trigger: CCAGAAACCCAGTTCTCTGCAGAGCCCCACACCTAT...GTGCTTATCTGCTAAGGGCAGGAGCCACACGTGTGTGACCGCAGATAACACGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR GCA 90 bp | GCTCGGCTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGTGGGCAACCCATGGGTaGTGGCAGCCTATAACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARLHSTIIYRSAGAGSARWATHG*WQPITL Trigger: GAGGGTTATAGGCTGCCAGCACCCATGGGTTGCCCA...CCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAGCCGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | TACACATTGTTTCCATCAGCTGCCAGGACCTTGTGGGGCACCCCCATACCTACCTCAGCTGGGCCCTCATaGTCTGGATGCTTCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YTLFPSAARTLWGTPIPTSAGPS*SGCFQV Trigger: TACTTGGAAGCATCCAGACCATGAGGGCCCAGCTGA...GGTAGGTATGGGGGTGCCCCACAAGGTCCTGGCAGCTGATGGAAACAATGTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR TCA 90 bp | GCTCGGCTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGTCTCGTACTCCAGAATaGTGCCGTTGGGCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARLHSTIIYRSAGAGSARSRTPE*CRWAAL Trigger: CAGAGCAGCCCAACGGCATCATTCTGGAGTACGAGA...CCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAGCCGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR GCA 90 bp | ACGTCTGTGCTGGGGCCTGACGGGGAACAGAGACATGATTACACATTGTTTCCACTAACACCCCTGGGATaGTATTGCAGTCACGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSVLGPDGEQRHDYTLFPLTPLG*YCSHAG Trigger: CCCTGCGTGACTGCAATAGCATCCCAGGGGTGTTAG...TGGAAACAATGTGTAATCATGTCTCTGTTCCCCGTCAGGCCCCAGCACAGACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | TACACATTGTTTCCATCAGCTGCCAGGACCTTGTGGGGCACCCCCATACCTACCTCAATCTTGAGGAACTaGCTCTCTTGTGTGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YTLFPSAARTLWGTPIPTSILRN*LSCVLA Trigger: GGCCAGCACACAAGAGAGCCAGTTCCTCAAGATTGA...GGTAGGTATGGGGGTGCCCCACAAGGTCCTGGCAGCTGATGGAAACAATGTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | CTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGCACCTGAGGCTCTCAGGACTGTaGACCAGGGCATCCAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: LHSTIIYRSAGAGSARHLRLSGL*TRASRT Trigger: CGTTCTGGATGCCCTGGTCCACAGTCCTGAGAGCCT...CAGGTGCCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | GACCTCAGGCAAGGCATCCTCGTCTCTGGGCATTACCTATATGGTATAGGAAGGCAGCCCCAGTCTCCGTaGATGGTTGATGTATCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLRQGILVSGHYLYGIGRQPQSP*MVDVSN Trigger: GTTGGATACATCAACCATCCACGGAGACTGGGGCTG...CCTTCCTATACCATATAGGTAATGCCCAGAGACGAGGATGCCTTGCCTGAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CCA 90 bp | GCTCGGCTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGTCTCAATGTGGATCCTaGATGCCTCGATCTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARLHSTIIYRSAGAGSARSQCGS*MPRSLG Trigger: CCCGAGAGATCGAGGCATCCAGGATCCACATTGAGA...CCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAGCCGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR TCA 90 bp | ACGTCTGTGCTGGGGCCTGACGGGGAACAGAGACATGATTACACATTGTTTCCAAGTATCTTCTTCTGGTaGCCCATGAGAGTGATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TSVLGPDGEQRHDYTLFPSIFFW*PMRVMP Trigger: CGGCATCACTCTCATGGGTCACCAGAAGAAGATACT...TGGAAACAATGTGTAATCATGTCTCTGTTCCCCGTCAGGCCCCAGCACAGACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| 3UTR CAA 72 bp | ATGGGGCTCTCTCACCCAGGGAGCTTTGCATGTGCTTaGAAGACCATTTTTGCATTGTCAGAAGTGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MGLSHPGSFACA*KTIFALSEVRR Trigger: TCTCCTCACTTCTGACAATGCAAAAATGGTCTTCAAAGCACATGCAAAGCTCCCTGGGTGAGAGAGCCCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS TCA 90 bp | GGGTGCAGGCTGCCGATGGTGGGTCCAAGGCCGCGCGGTAGTAGCTaGGGTCACAACGGCAGGTCTGGGCCGCAGGGGTGGCAGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GCRLPMVGPRPRGSS*GHNGRSGPQGWQSG Trigger: GCCACTCTGCCACCCCTGCGGCCCAGACCTGCCGTTGTGACCTCAGCTACTACCGCGCGGCCTTGGACCCACCATCGGCAGCCTGCACCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS GCA 90 bp | GGTTCCTGCCACAGGAGTGACACGCTGGTCTGCCCAGCCCGCTCCTaGCGGATCACCACCACCTGGGACGGGGCTGCCTGGTTCGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSCHRSDTLVCPARS*RITTTWDGAAWFVV Trigger: CACCACGAACCAGGCAGCCCCGTCCCAGGTGGTGGTGATCCGGCAGGAGCGGGCTGGGCAGACCAGCGTGTCACTCCTGTGGCAGGAACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS TCA 90 bp | CCCGGTCTCCACCTCCATGGCCTGGCTGAAGCGGCCACAGCCTGCTaGGGTGCGGGCTCGGACCTGGAACACGTAGCGAGTGCCTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PGLHLHGLAEAATAC*GAGSDLEHVASAWF Trigger: AAACCAGGCACTCGCTACGTGTTCCAGGTCCGAGCCCGCACCTCAGCAGGCTGTGGCCGCTTCAGCCAGGCCATGGAGGTGGAGACCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS CCA 90 bp | GCAGCGGCGGCACACTGCGTTGTAGGTGATGTCGCTGCGACCACCTaGGTCCAGAGGAGGGGCCCACTCGAGGGTCACAGACGTTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: AAAAHCVVGDVAATT*VQRRGPLEGHRRSI Trigger: AATGGAACGTCTGTGACCCTCGAGTGGGCCCCTCCTCTGGACCCAGGTGGTCGCAGCGACATCACCTACAACGCAGTGTGCCGCCGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS TCA 90 bp | GGTCACAGACGTTCCATTTACGCTGGAGATCAGGTTCACTGGTGCTaGGGGTGGCCGGGTGCAGGCTGCCGATGGTGGGTCCAAGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GHRRSIYAGDQVHWC*GWPGAGCRWWVQGR Trigger: GCGGCCTTGGACCCACCATCGGCAGCCTGCACCCGGCCACCCTCAGCACCAGTGAACCTGATCTCCAGCGTAAATGGAACGTCTGTGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS CCA 90 bp | CCAGAGGAGGGGCCCACTCGAGGGTCACAGACGTTCCATTTACGCTaGAGATCAGGTTCACTGGTGCTGAGGGTGGCCGGGTGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PEEGPTRGSQTFHLR*RSGSLVLRVAGCRL Trigger: CAGCCTGCACCCGGCCACCCTCAGCACCAGTGAACCTGATCTCCAGCGTAAATGGAACGTCTGTGACCCTCGAGTGGGCCCCTCCTCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | TCACGCTCTGCTGTGATCCTCTACGGAAGGTGGCCAGAGGGACTGGCCAGGAACATGTGGGCTAGCAGGTaGGCCACCAGCAGGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRSAVILYGRWPEGLARNMWASR*ATSRLA Trigger: GGCCAGCCTGCTGGTGGCCAACCTGCTAGCCCACAT...GTTCCTGGCCAGTCCCTCTGGCCACCTTCCGTAGAGGATCACAGCAGAGCGTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | GAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGTGCTGGCTGTGGGCAGGGATCCAGAATGATGCCGTaGGGCTGCTCTGGTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EGAQCWCLTGCCAGCGQGSRMMP*GCSGSC Trigger: GCAGGAACCAGAGCAGCCCAACGGCATCATTCTGGA...TCCCTGCCCACAGCCAGCACAGCACCCTGTGAGACACCAGCACTGAGCCCCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS TCA 90 bp | CCCATGAGCGGGATACGTGAGCCAGCCCCAGTCTCCGTGGATGGTTaGTGTATCCAACAAGTTCACTTCGCCGCGCCCCGCGGACACGCA | + |
|
Preference number: 5 (lower is better) Translates to: PMSGIREPAPVSVDG*CIQQVHFAAPRGHA Trigger: TGCGTGTCCGCGGGGCGCGGCGAAGTGAACTTGTTGGATACATCAACCATCCACGGAGACTGGGGCTGGCTCACGTATCCCGCTCATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS GCA 90 bp | CCCTCAGCACTGCAGTACATCTTGGGTGTGTCGCGCTCTTCCGAGTaGCGCACACACTGGCCTCGAACCTCAACCAGCGAGGACGAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PSALQYILGVSRSSE*RTHWPRTSTSEDES Trigger: CGACTCGTCCTCGCTGGTTGAGGTTCGAGGCCAGTGTGTGCGGCACTCGGAAGAGCGCGACACACCCAAGATGTACTGCAGTGCTGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS CCA 90 bp | CAGTACATCTTGGGTGTGTCGCGCTCTTCCGAGTGCCGCACACACTaGCCTCGAACCTCAACCAGCGAGGACGAGTCGGCCCCAGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: QYILGVSRSSECRTH*PRTSTSEDESAPVT Trigger: GGTTACTGGGGCCGACTCGTCCTCGCTGGTTGAGGTTCGAGGCCAGTGTGTGCGGCACTCGGAAGAGCGCGACACACCCAAGATGTACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | TCACGCTCTGCTGTGATCCTCTACGGAAGGTGGCCAGAGGGACTGGCCAGGAACGAGGAACTGGCTCTCTaGTGTGCTGGCCCCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRSAVILYGRWPEGLARNEELAL*CAGPQV Trigger: GACCTGGGGGCCAGCACACAAGAGAGCCAGTTCCTC...GTTCCTGGCCAGTCCCTCTGGCCACCTTCCGTAGAGGATCACAGCAGAGCGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS TCA 90 bp | CCACAGCAGCGCTGCGGGGCTCAGGGCTCAGGTTGGAGACACCGTTaGCTGCCTCGATCCAGAAGGAGTAGTTCATGTGGGCTAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PQQRCGAQGSGWRHR*LPRSRRSSSCGLAG Trigger: ACCTGCTAGCCCACATGAACTACTCCTTCTGGATCGAGGCAGTCAACGGTGTCTCCAACCTGAGCCCTGAGCCCCGCAGCGCTGCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS GCA 90 bp | AACCAGCGAGGACGAGTCGGCCCCAGTAACCGCCTCCGAGAAGGCTaGCAGGTTGCGTACCATGGCGGGGCACTTCTTGTAGTAGATTCG | + |
|
Preference number: 5 (lower is better) Translates to: NQRGRVGPSNRLREG*QVAYHGGALLVVDS Trigger: CGAATCTACTACAAGAAGTGCCCCGCCATGGTACGCAACCTGGCAGCCTTCTCGGAGGCGGTTACTGGGGCCGACTCGTCCTCGCTGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS CCA 90 bp | AGAAGGAGTAGTTCATGTGGGCTAGCAGGTTGGCCACCAGCAGGCTaGCCTGTGCCAGGCTTGTCTGCTGCGGGACGAAGCGAGTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RRSSSCGLAGWPPAG*PVPGLSAAGRSEFH Trigger: GTGGAACTCGCTTCGTCCCGCAGCAGACAAGCCTGGCACAGGCCAGCCTGCTGGTGGCCAACCTGCTAGCCCACATGAACTACTCCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS CCA 90 bp | CCTGGATGCCTCGATCTCTCGGGTAAAGCTCCGGCCTGCCCGACCTaGTTCCTCATAGGTGTGGGGCTCTGCAGAGAACTGGGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGCLDLSGKAPACPT*FLIGVGLCRELGFW Trigger: CCAGAAACCCAGTTCTCTGCAGAGCCCCACACCTATGAGGAACCAGGTCGGGCAGGCCGGAGCTTTACCCGAGAGATCGAGGCATCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CAA 90 bp | GGGCACCCCCATACCTACCATCAACCCTATGCATGCACGCATGCACCCACAGCTACCTCCGTGTTCAGCTaGAGCCTCCGCACACCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GHPHTYHQPYACTHAPTATSVFS*SLRTPR Trigger: CCTGGGTGTGCGGAGGCTCAAGCTGAACACGGAGGT...AGCTGTGGGTGCATGCGTGCATGCATAGGGTTGATGGTAGGTATGGGGGTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CAA 90 bp | AGGTCCTGGGAACTGGGCAGTGTCAGCTCAGATCCCCTGCTCACACTCTGTCATGAGAAGGCTGCCAGGTaGCGTACCATGGCGGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSWELGSVSSDPLLTLCHEKAAR*RTMAGH Trigger: GTGCCCCGCCATGGTACGCAACCTGGCAGCCTTCTC...ATGACAGAGTGTGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | CCACAGGTCCTGGGAACTGGGCAGTGTCAGCTCAGATCCCCTGCTCACACTCTGGCACTGCAGTACATCTaGGGTGTGTCGCGCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PQVLGTGQCQLRSPAHTLALQYI*GVSRSS Trigger: GGAAGAGCGCGACACACCCAAGATGTACTGCAGTGC...CAGAGTGTGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CAA 90 bp | TCACGCTCTGCTGTGATCCTCTACGGAAGGTGGCCAGAGGGACTGGCCAGGAACCCAGCTTTGAGAGCCTaGATGGCCACAGGCACATCG | + |
|
Preference number: 5 (lower is better) Translates to: SRSAVILYGRWPEGLARNPALRA*MATGTS Trigger: CGATGTGCCTGTGGCCATCAAGGCTCTCAAAGCTGG...GTTCCTGGCCAGTCCCTCTGGCCACCTTCCGTAGAGGATCACAGCAGAGCGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | GACGTGTTATCTGCGGTCACACACGTGTGGCTCCTGCCCTTAGCAGATAAGCACCGCTGGGCACGGTCCTaGTGCCAGCAGTCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: DVLSAVTHVWLLPLADKHRWARS*CQQSSM Trigger: CATGCTGGACTGCTGGCACAAGGACCGTGCCCAGCG...GTGCTTATCTGCTAAGGGCAGGAGCCACACGTGTGTGACCGCAGATAACACGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS TCA 90 bp | AGCTGGGCCCTCATGGTCTGGATGCTTCCAAGTATCTTCTTCTGGTaGCCCATGAGAGTGATGCCGAGGGCGCGCACATCCTGGGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SWALMVWMLPSIFFW*PMRVMPRARTSWAF Trigger: GAACGCCCAGGATGTGCGCGCCCTCGGCATCACTCTCATGGGTCACCAGAAGAAGATACTTGGAAGCATCCAGACCATGAGGGCCCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS GCA 90 bp | AATGTGGATCCTGGATGCCTCGATCTCTCGGGTAAAGCTCCGGCCTaGCCGACCTGGTTCCTCATAGGTGTGGGGCTCTGCAGAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: NVDPGCLDLSGKAPA*PTWFLIGVGLCREL Trigger: CAGTTCTCTGCAGAGCCCCACACCTATGAGGAACCAGGTCGGGCAGGCCGGAGCTTTACCCGAGAGATCGAGGCATCCAGGATCCACATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | CCCTGGTGGGCCGTAAGGGGGTTATCAGCCTGTGGCGGTGAGCTTCCCAGGCCCAGTCTCCGTGGATGGTaGATGTATCCAACAAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PWWAVRGLSACGGELPRPSLRGW*MYPTSS Trigger: TGAACTTGTTGGATACATCAACCATCCACGGAGACT...GGGCCTGGGAAGCTCACCGCCACAGGCTGATAACCCCCTTACGGCCCACCAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | CCACAGGTCCTGGGAACTGGGCAGTGTCAGCTCAGATCCCCTGCTCACACTCTGCATGACGTTGCATACTaGGTACGTGTGGATGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PQVLGTGQCQLRSPAHTLHDVAY*VRVDGP Trigger: CGGCCCATCCACACGTACCAAGTATGCAACGTCATG...CAGAGTGTGAGCAGGGGATCTGAGCTGACACTGCCCAGTTCCCAGGACCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS-3UTR CAA 90 bp | GACGTGTTATCTGCGGTCACACACGTGTGGCTCCTGCCCTTAGCAGATAAGCACGGCTCAGGGCTCAGGTaGGAGACACCGTTGACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: DVLSAVTHVWLLPLADKHGSGLR*ETPLTA Trigger: GGCAGTCAACGGTGTCTCCAACCTGAGCCCTGAGCC...GTGCTTATCTGCTAAGGGCAGGAGCCACACGTGTGTGACCGCAGATAACACGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | GGTTATCAGCCTGTGGCGGTGAGCTTCCCAGGCCCCTCCCATCCTAGCAGTCTGCCACAGTGCCTCTTCTaGCAGATGAGAAGCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GYQPVAVSFPGPSHPSSLPQCLF*QMRSKR Trigger: CCTCTTGCTTCTCATCTGCAAGAAGAGGCACTGTGG...CAGACTGCTAGGATGGGAGGGGCCTGGGAAGCTCACCGCCACAGGCTGATAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | GGTAGTGGGACGTTGGGCAGAGGCATCACAGCCATGAGAGCAGATGGCCAGGCAAGCCAGTTGTTCTGGTaGGGGCTCATGACGTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSGTLGRGITAMRADGQASQLFW*GLMTLH Trigger: ATGCAACGTCATGAGCCCCAACCAGAACAACTGGCT...TGCCTGGCCATCTGCTCTCATGGCTGTGATGCCTCTGCCCAACGTCCCACTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | TGTTTCCATCAGCTGCCAGGACCTTGTGGGGCACCCCCATACCTACCATCAACCTTCGTGCGCAGCCAGTaGTTCTGGTTGGGGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: CFHQLPGPCGAPPYLPSTFVRSQ*FWLGLM Trigger: CATGAGCCCCAACCAGAACAACTGGCTGCGCACGAA...GGTTGATGGTAGGTATGGGGGTGCCCCACAAGGTCCTGGCAGCTGATGGAAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | GCCTCCTCATTCATGACGTGTTATCTGCGGTCACACACGTGTGGCTCCTGCCCTAGGTTGGAGACACCGTaGACTGCCTCGATCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASSFMTCYLRSHTCGSCPRLETP*TASIQK Trigger: CTTCTGGATCGAGGCAGTCAACGGTGTCTCCAACCT...AGGGCAGGAGCCACACGTGTGTGACCGCAGATAACACGTCATGAATGAGGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | GACCTCAGGCAAGGCATCCTCGTCTCTGGGCATTACCTATATGGTATAGGAAGGTGGTTCGTGGTGATGTaGACCACAGCAGCGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: DLRQGILVSGHYLYGIGRWFVVM*TTAALR Trigger: CCGCAGCGCTGCTGTGGTCAACATCACCACGAACCA...CCTTCCTATACCATATAGGTAATGCCCAGAGACGAGGATGCCTTGCCTGAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | CCTGAATTATTGCAGAAGGGAGGGGGCTCAGTGCTGGTGTCTCACAGGGTGCTGCTCGCTCAAGAAGTCTaGTCGCTGTCTCTCCGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PELLQKGGGSVLVSHRVLLAQEV*SLSLRV Trigger: TACACGGAGAGACAGCGACAAGACTTCTTGAGCGAG...CAGCACCCTGTGAGACACCAGCACTGAGCCCCCTCCCTTCTGCAATAATTCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | TGGAAGACAAGGTGTCCCCACCCCTCGTGTCCTGACCATGTTTCCCACTTCCATAGGTTGAAGGTCTCCTaGCAGGTACCTAACACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: WKTRCPHPSCPDHVSHFHRLKVS*QVPNTP Trigger: AGGGGTGTTAGGTACCTGCAAGGAGACCTTCAACCT...ATGGAAGTGGGAAACATGGTCAGGACACGAGGGGTGGGGACACCTTGTCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | TGTTTCCATCAGCTGCCAGGACCTTGTGGGGCACCCCCATACCTACCATCAACCGCGATGGTGTCAATCTaGAGGAACTGGCTCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CFHQLPGPCGAPPYLPSTAMVSI*RNWLSC Trigger: ACAAGAGAGCCAGTTCCTCAAGATTGACACCATCGC...GGTTGATGGTAGGTATGGGGGTGCCCCACAAGGTCCTGGCAGCTGATGGAAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | GCTCGGCTACATAGTACTATAATATATAGAAGCGCAGGAGCTGGCAGCGCACGGACCCCTGGGATGCTATaGCAGTCACGCAGGGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ARLHSTIIYRSAGAGSARTPGML*QSRRVN Trigger: ATTCACCCTGCGTGACTGCAATAGCATCCCAGGGGT...CCGTGCGCTGCCAGCTCCTGCGCTTCTATATATTATAGTACTATGTAGCCGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | ACGTCTGTGCTGGGGCCTGACGGGGAACAGAGACATGATTACACATTGTTTCCACATCCTCCAGAGCCCTaGAGAGCCCAAAGTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: TSVLGPDGEQRHDYTLFPHPPEP*RAQSLT Trigger: TGTCAGACTTTGGGCTCTCAAGGGCTCTGGAGGATG...TGGAAACAATGTGTAATCATGTCTCTGTTCCCCGTCAGGCCCCAGCACAGACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | GACCTCAGGCAAGGCATCCTCGTCTCTGGGCATTACCTATATGGTATAGGAAGGTTGGGGCTCATGACGTaGCATACTTGGTACGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DLRQGILVSGHYLYGIGRLGLMT*HTWYVW Trigger: CCACACGTACCAAGTATGCAACGTCATGAGCCCCAA...CCTTCCTATACCATATAGGTAATGCCCAGAGACGAGGATGCCTTGCCTGAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | ACGTCTGTGCTGGGGCCTGACGGGGAACAGAGACATGATTACACATTGTTTCCAGTTAGGGTGATCAAATaGGCCCATGATGGCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TSVLGPDGEQRHDYTLFPVRVIK*AHDGCL Trigger: GAGGCAGCCATCATGGGCCAATTTGATCACCCTAAC...TGGAAACAATGTGTAATCATGTCTCTGTTCCCCGTCAGGCCCCAGCACAGACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS-3UTR CAA 90 bp | TGGAAGACAAGGTGTCCCCACCCCTCGTGTCCTGACCATGTTTCCCACTTCCATGAGGGTAGAGTAACTTaGCATCTCCTTATCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WKTRCPHPSCPDHVSHFHEGRVT*HLLILL Trigger: GAGAAGGATAAGGAGATGCAAAGTTACTCTACCCTC...ATGGAAGTGGGAAACATGGTCAGGACACGAGGGGTGGGGACACCTTGTCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS TCA 72 bp | GGGCCCAGGGGCAGCGGCGGCACACTGCGTTGTAGGTaGTGTCGCTGCGACCACCTGGGTCCAGAGGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPRGSGGTLRCR*CRCDHLGPEEG Trigger: CCCCTCCTCTGGACCCAGGTGGTCGCAGCGACATCACCTACAACGCAGTGTGCCGCCGCTGCCCCTGGGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS GCA 72 bp | CACAGGAGTGACACGCTGGTCTGCCCAGCCCGCTCCTaGCGGATCACCACCACCTGGGACGGGGCTGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HRSDTLVCPARS*RITTTWDGAAW Trigger: CCAGGCAGCCCCGTCCCAGGTGGTGGTGATCCGGCAGGAGCGGGCTGGGCAGACCAGCGTGTCACTCCTGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS CCA 72 bp | CGGGGCCTGGGTTTCCCGGTCTCCACCTCCATGGCCTaGCTGAAGCGGCCACAGCCTGCTGAGGTGCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RGLGFPVSTSMA*LKRPQPAEVRA Trigger: AGCCCGCACCTCAGCAGGCTGTGGCCGCTTCAGCCAGGCCATGGAGGTGGAGACCGGGAAACCCAGGCCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS TCA 72 bp | GGGTGGGCATCGGGCGCACAGCTGGTCCCCGGGGGCTaGCTTGTAGAAGCCCAGCTCACAGGCCATGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GWASGAQLVPGG*LVEAQLTGHAG Trigger: GCCTGCATGGCCTGTGAGCTGGGCTTCTACAAGTCAGCCCCCGGGGACCAGCTGTGCGCCCGATGCCCACCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS TCA 72 bp | CTGCCGATGGTGGGTCCAAGGCCGCGCGGTAGTAGCTaGGGTCACAACGGCAGGTCTGGGCCGCAGGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPMVGPRPRGSS*GHNGRSGPQGW Trigger: CCACCCCTGCGGCCCAGACCTGCCGTTGTGACCTCAGCTACTACCGCGCGGCCTTGGACCCACCATCGGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS CCA 72 bp | GGGACGAAGCGAGTTCCACTCCCACAAGCCTCACAGTaGCTCAGGGCCCAGGGGCAGCGGCGGCACACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: GTKRVPLPQASQ*LRAQGQRRHTA Trigger: CGCAGTGTGCCGCCGCTGCCCCTGGGCCCTGAGCCACTGTGAGGCTTGTGGGAGTGGAACTCGCTTCGTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS GCA 72 bp | GGGCGCGCACATCCTGGGCGTTCATCCGAAGCACCATaGCGAGGGAGGAGTACCCGCCAGCCGCGAAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRAHPGRSSEAP*RGRSTRQPRSG Trigger: ACCACTTCGCGGCTGGCGGGTACTCCTCCCTCGGCATGGTGCTTCGGATGAACGCCCAGGATGTGCGCGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS CAA 72 bp | ACCACCTGGGACGGGGCTGCCTGGTTCGTGGTGATGTaGACCACAGCAGCGCTGCGGGGCTCAGGGCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TTWDGAAWFVVM*TTAALRGSGLR Trigger: CCTGAGCCCTGAGCCCCGCAGCGCTGCTGTGGTCAACATCACCACGAACCAGGCAGCCCCGTCCCAGGTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS TCA 72 bp | CACCTCCATGGCCTGGCTGAAGCGGCCACAGCCTGCTaGGGTGCGGGCTCGGACCTGGAACACGTAGCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: HLHGLAEAATAC*GAGSDLEHVAS Trigger: ACTCGCTACGTGTTCCAGGTCCGAGCCCGCACCTCAGCAGGCTGTGGCCGCTTCAGCCAGGCCATGGAGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS TCA 72 bp | GGACTGTGGACCAGGGCATCCAGAACGCTCACGACATaGGCGAAGCGAGGCCGCTGGGCACGGTCCTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GLWTRASRTLTT*AKRGRWARSLC Trigger: GCACAAGGACCGTGCCCAGCGGCCTCGCTTCGCTCATGTCGTGAGCGTTCTGGATGCCCTGGTCCACAGTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS GCA 72 bp | GCCACCAGCAGGCTGGCCTGTGCCAGGCTTGTCTGCTaGGGGACGAAGCGAGTTCCACTCCCACAAGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ATSRLACARLVC*GTKRVPLPQAS Trigger: TGAGGCTTGTGGGAGTGGAACTCGCTTCGTCCCGCAGCAGACAAGCCTGGCACAGGCCAGCCTGCTGGTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS GCA 72 bp | TTGGCCACCAGCAGGCTGGCCTGTGCCAGGCTTGTCTaGTGCGGGACGAAGCGAGTTCCACTCCCACAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LATSRLACARLV*CGTKRVPLPQA Trigger: GGCTTGTGGGAGTGGAACTCGCTTCGTCCCGCAGCAGACAAGCCTGGCACAGGCCAGCCTGCTGGTGGCCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS CCA 72 bp | TTGGGTGTGTCGCGCTCTTCCGAGTGCCGCACACACTaGCCTCGAACCTCAACCAGCGAGGACGAGTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGVSRSSECRTH*PRTSTSEDESA Trigger: GGCCGACTCGTCCTCGCTGGTTGAGGTTCGAGGCCAGTGTGTGCGGCACTCGGAAGAGCGCGACACACCCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
||
| CDS GCA 72 bp | GGACGAGTCGGCCCCAGTAACCGCCTCCGAGAAGGCTaGCAGGTTGCGTACCATGGCGGGGCACTTCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: GRVGPSNRLREG*QVAYHGGALLV Trigger: TACAAGAAGTGCCCCGCCATGGTACGCAACCTGGCAGCCTTCTCGGAGGCGGTTACTGGGGCCGACTCGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS GCA 72 bp | GCCTGCCCGACCTGGTTCCTCATAGGTGTGGGGCTCTaGAGAGAACTGGGTTTCTGGGAACTTCCCCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: ACPTWFLIGVGL*RELGFWELPRG Trigger: CCCCCGGGGAAGTTCCCAGAAACCCAGTTCTCTGCAGAGCCCCACACCTATGAGGAACCAGGTCGGGCAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS GCA 72 bp | CCTGGATGCCTCGATCTCTCGGGTAAAGCTCCGGCCTaGCCGACCTGGTTCCTCATAGGTGTGGGGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: PGCLDLSGKAPA*PTWFLIGVGLC Trigger: GCAGAGCCCCACACCTATGAGGAACCAGGTCGGGCAGGCCGGAGCTTTACCCGAGAGATCGAGGCATCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS CCA 72 bp | AGTTCATGTGGGCTAGCAGGTTGGCCACCAGCAGGCTaGCCTGTGCCAGGCTTGTCTGCTGCGGGACGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSCGLAGWPPAG*PVPGLSAAGRS Trigger: GCTTCGTCCCGCAGCAGACAAGCCTGGCACAGGCCAGCCTGCTGGTGGCCAACCTGCTAGCCCACATGAACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS TCA 72 bp | CGTTCCATTTACGCTGGAGATCAGGTTCACTGGTGCTaGGGGTGGCCGGGTGCAGGCTGCCGATGGTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: RSIYAGDQVHWC*GWPGAGCRWWV Trigger: GACCCACCATCGGCAGCCTGCACCCGGCCACCCTCAGCACCAGTGAACCTGATCTCCAGCGTAAATGGAACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS CCA 72 bp | GGGCCCACTCGAGGGTCACAGACGTTCCATTTACGCTaGAGATCAGGTTCACTGGTGCTGAGGGTGGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: GPTRGSQTFHLR*RSGSLVLRVAG Trigger: CCCGGCCACCCTCAGCACCAGTGAACCTGATCTCCAGCGTAAATGGAACGTCTGTGACCCTCGAGTGGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS CAA 72 bp | TTGACCACAGCAGCGCTGCGGGGCTCAGGGCTCAGGTaGGAGACACCGTTGACTGCCTCGATCCAGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LTTAALRGSGLR*ETPLTASIQKE Trigger: CTCCTTCTGGATCGAGGCAGTCAACGGTGTCTCCAACCTGAGCCCTGAGCCCCGCAGCGCTGCTGTGGTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS TCA 72 bp | GGGATACGTGAGCCAGCCCCAGTCTCCGTGGATGGTTaGTGTATCCAACAAGTTCACTTCGCCGCGCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: GIREPAPVSVDG*CIQQVHFAAPR Trigger: GCGGGGCGCGGCGAAGTGAACTTGTTGGATACATCAACCATCCACGGAGACTGGGGCTGGCTCACGTATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS TCA 72 bp | CGCTGCGGGGCTCAGGGCTCAGGTTGGAGACACCGTTaGCTGCCTCGATCCAGAAGGAGTAGTTCATGTGGG | + |
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Preference number: 6 (lower is better) Translates to: RCGAQGSGWRHR*LPRSRRSSSCG Trigger: CCCACATGAACTACTCCTTCTGGATCGAGGCAGTCAACGGTGTCTCCAACCTGAGCCCTGAGCCCCGCAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS CCA 72 bp | GCACCAGCCATTCGCCCTCAGCACTGCAGTACATCTTaGGTGTGTCGCGCTCTTCCGAGTGCCGCACACACT | + |
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Preference number: 6 (lower is better) Translates to: APAIRPQHCSTS*VCRALPSAAHT Trigger: AGTGTGTGCGGCACTCGGAAGAGCGCGACACACCCAAGATGTACTGCAGTGCTGAGGGCGAATGGCTGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS GCA 72 bp | CCCCGAGCCTATGATCTTCTCAATGTGGATCCTGGATaGCTCGATCTCTCGGGTAAAGCTCCGGCCTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: PRAYDLLNVDPG*LDLSGKAPACP Trigger: CGGGCAGGCCGGAGCTTTACCCGAGAGATCGAGGCATCCAGGATCCACATTGAGAAGATCATAGGCTCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS TCA 72 bp | CTCATGGTCTGGATGCTTCCAAGTATCTTCTTCTGGTaGCCCATGAGAGTGATGCCGAGGGCGCGCACATCC | + |
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Preference number: 6 (lower is better) Translates to: LMVWMLPSIFFW*PMRVMPRARTS Trigger: GGATGTGCGCGCCCTCGGCATCACTCTCATGGGTCACCAGAAGAAGATACTTGGAAGCATCCAGACCATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS CCA 72 bp | TCTCCTGACTCCCCCGAGCCTATGATCTTCTCAATGTaGATCCTGGATGCCTCGATCTCTCGGGTAAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SPDSPEPMIFSM*ILDASISRVKL Trigger: GAGCTTTACCCGAGAGATCGAGGCATCCAGGATCCACATTGAGAAGATCATAGGCTCGGGGGAGTCAGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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| CDS CAA 72 bp | GGCGCGGGTGGTGACAGCCTTGAGGGTAGAGTAACTTaGCATCTCCTTATCCTTCTCGTAGTACTTGATCTC | + |
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Preference number: 6 (lower is better) Translates to: GAGGDSLEGRVT*HLLILLVVLDL Trigger: GAGATCAAGTACTACGAGAAGGATAAGGAGATGCAAAGTTACTCTACCCTCAAGGCTGTCACCACCCGCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030420.9 |
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