Pregenerated sensors for EPHA6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055540Ensembl transcript IDs: ENSMUST00000068860.13
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACGTAAGGTGTGCAGCCATAGTCGGAACAGGAGACGGTGGGTGGTaGAGGGAAGGCTGGAGAATCAGAAGAATGAGTCGTAGAGGGAAT | + |
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Preference number: 1 (lower is better) Translates to: NVRCAAIVGTGDGGW*REGWRIRRMSRRGN Trigger: ATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTTCCGACTATGGCTGCACACCTTACGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| 3UTR TCA 90 bp | CAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGAATCAGAAGAATaGGTCGTAGAGGGAATATCTTTCTTTGTAGAAATGCTGAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: QETVGGEGKAGESEE*VVEGISFFVEMLRH Trigger: GTGCCTCAGCATTTCTACAAAGAAAGATATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCCTTCCCTTCACCACCCACCGTCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| 3UTR TCA 90 bp | GTTTCGTTTGCAGGCTATTCAGAGAGGACCTGTGTAGCGTGGTATTaGAATCCAGGGTGGAAGCATAAACGTAAGGTGTGCAGCCATAGT | + |
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Preference number: 1 (lower is better) Translates to: VSFAGYSERTCVAWY*NPGWKHKRKVCSHS Trigger: ACTATGGCTGCACACCTTACGTTTATGCTTCCACCCTGGATTTCAATACCACGCTACACAGGTCCTCTCTGAATAGCCTGCAAACGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| 3UTR CCA 90 bp | ACATTCATGCTGAGTTATTTATCGTTCTGCAGTGATGATCTGCAGTaGGCCAGAGTTTCGTTTGCAGGCTATTCAGAGAGGACCTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: TFMLSYLSFCSDDLQ*ARVSFAGYSERTCV Trigger: TACACAGGTCCTCTCTGAATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAAATAACTCAGCATGAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| 3UTR TCA 72 bp | GCAGGCTATTCAGAGAGGACCTGTGTAGCGTGGTATTaGAATCCAGGGTGGAAGCATAAACGTAAGGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: AGYSERTCVAWY*NPGWKHKRKVC Trigger: GCACACCTTACGTTTATGCTTCCACCCTGGATTTCAATACCACGCTACACAGGTCCTCTCTGAATAGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| 3UTR CCA 72 bp | CTGAGTTATTTATCGTTCTGCAGTGATGATCTGCAGTaGGCCAGAGTTTCGTTTGCAGGCTATTCAGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: LSYLSFCSDDLQ*ARVSFAGYSER Trigger: CCTCTCTGAATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAAATAACTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| 3UTR TCA 72 bp | GTGGGTGGTGAAGGGAAGGCTGGAGAATCAGAAGAATaGGTCGTAGAGGGAATATCTTTCTTTGTAGAAATG | + |
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Preference number: 3 (lower is better) Translates to: VGGEGKAGESEE*VVEGISFFVEM Trigger: CATTTCTACAAAGAAAGATATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCCTTCCCTTCACCACCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| 3UTR GCA 72 bp | CAAAGTTACACATTCATGCTGAGTTATTTATCGTTCTaGAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTT | + |
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Preference number: 3 (lower is better) Translates to: QSYTFMLSYLSF*SDDLQWARVSF Trigger: AAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAAATAACTCAGCATGAATGTGTAACTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| 3UTR TCA 72 bp | TCCCAAACATTTCTGTACAAAGTTACACATTCATGCTaGGTTATTTATCGTTCTGCAGTGATGATCTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: SQTFLYKVTHSC*VIYRSAVMICS Trigger: ACTGCAGATCATCACTGCAGAACGATAAATAACTCAGCATGAATGTGTAACTTTGTACAGAAATGTTTGGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | ATCCAGGGTGGAAGCATAAACGTAAGGTGTGCAGCCATAGTCGGAACAGGAGACGGGGACGATGCTGCCTaGGCCGCCGGGGAGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: IQGGSINVRCAAIVGTGDGDDAA*AAGELL Trigger: CAGGAGCTCCCCGGCGGCGCAGGCAGCATCGTCCCC...GTCTCCTGTTCCGACTATGGCTGCACACCTTACGTTTATGCTTCCACCCTGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | AACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGAATCAGAAGAATGAGTCGTCCTCCACCAGCGTGTaGAGGGCACTGGGGTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: NRRRWVVKGRLENQKNESSSTSV*RALGLR Trigger: CCGCAACCCCAGTGCCCTTCACACGCTGGTGGAGGA...CGACTCATTCTTCTGATTCTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | GTGTGCAGCCATAGTCGGAACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGAGAGCAAGGCTGTTCTaGGATGCCCAGTCCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: VCSHSRNRRRWVVKGRLERARLF*DAQSFL Trigger: GAGAAAGGACTGGGCATCTCAGAACAGCCTTGCTCT...CTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTTCCGACTATGGCTGCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | TGGAAGCATAAACGTAAGGTGTGCAGCCATAGTCGGAACAGGAGACGGTGGGTGAGGTGCTGGAGCAGCTaGTTGCGGGGACGATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: WKHKRKVCSHSRNRRRWVRCWSS*LRGRCC Trigger: GCAGCATCGTCCCCGCAAGCAGCTGCTCCAGCACCT...CACCCACCGTCTCCTGTTCCGACTATGGCTGCACACCTTACGTTTATGCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | GTGTGCAGCCATAGTCGGAACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGGCAACACAACTTGGTTaGAGACGTGACTGCAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: VCSHSRNRRRWVVKGRLEATQLG*RRDCSR Trigger: GCGACTGCAGTCACGTCTCCAACCAAGTTGTGTTGC...CTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTTCCGACTATGGCTGCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | CATAGTCGGAACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGAATCAGAAGCAGCCCTTAGGAAGCTaGGGCAGAAGGCTTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: HSRNRRRWVVKGRLENQKQPLGS*GRRLPP Trigger: GGGTGGAAGCCTTCTGCCCCAGCTTCCTAAGGGCTG...CTTCTGATTCTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTTCCGACTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | CATAGTCGGAACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGAATCAGAAGCAGTGTGTCTTGGGATaGAGCGGAGTCCTCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: HSRNRRRWVVKGRLENQKQCVLG*SGVLHH Trigger: GTGGTGGAGGACTCCGCTTCATCCCAAGACACACTG...CTTCTGATTCTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTTCCGACTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | AACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGAATCAGAAGAATGAGTCGGCCTCCTGCAGTCACTaGATGTGGCGCTTGGATGCC | + |
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Preference number: 4 (lower is better) Translates to: NRRRWVVKGRLENQKNESASCSH*MWRLDA Trigger: GGCATCCAAGCGCCACATCCAGTGACTGCAGGAGGC...CGACTCATTCTTCTGATTCTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | CATAGTCGGAACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGAATCAGAAGCAGTCCAGTGTGTCTTaGGATGAAGCGGAGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: HSRNRRRWVVKGRLENQKQSSVS*DEAESS Trigger: GGAGGACTCCGCTTCATCCCAAGACACACTGGACTG...CTTCTGATTCTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTTCCGACTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | GTGTGCAGCCATAGTCGGAACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGTCTTTTGCAAATTCGTaGACTGCTAGGGATGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: VCSHSRNRRRWVVKGRLESFANS*TARDGS Trigger: AGACCCATCCCTAGCAGTCCACGAATTTGCAAAAGA...CTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTTCCGACTATGGCTGCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | TGGAAGCATAAACGTAAGGTGTGCAGCCATAGTCGGAACAGGAGACGGTGGGTGAGCATGCCGACCAACTaGATGACGGTGAAGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: WKHKRKVCSHSRNRRRWVSMPTN*MTVKWP Trigger: TGGCCACTTCACCGTCATCCAGTTGGTCGGCATGCT...CACCCACCGTCTCCTGTTCCGACTATGGCTGCACACCTTACGTTTATGCTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | TGGAAGCATAAACGTAAGGTGTGCAGCCATAGTCGGAACAGGAGACGGTGGGTGTCCCTCCTGTGTCACTaGGTGGGCTCCATTCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: WKHKRKVCSHSRNRRRWVSLLCH*VGSIPK Trigger: TTTTGGAATGGAGCCCACCCAGTGACACAGGAGGGA...CACCCACCGTCTCCTGTTCCGACTATGGCTGCACACCTTACGTTTATGCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | AACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGAATCAGAAGAATGAGTCGTCGTGGAGGAATAGGTaGGCTGCTCATGCTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: NRRRWVVKGRLENQKNESSWRNR*AAHALS Trigger: AGAAAGAGCATGAGCAGCTCACCTATTCCTCCACGA...CGACTCATTCTTCTGATTCTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | CATAGTCGGAACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGAATCAGAAGAATCTGCCCTTGTTCTaGCGCCATGTCAGAAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: HSRNRRRWVVKGRLENQKNLPLF*RHVRSF Trigger: GAAACTTCTGACATGGCGGCAGAACAAGGGCAGATT...CTTCTGATTCTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTTCCGACTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | TGGAAGCATAAACGTAAGGTGTGCAGCCATAGTCGGAACAGGAGACGGTGGGTGCAGAAAGATACTTCATaGCTGACGCGATGCCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: WKHKRKVCSHSRNRRRWVQKDTS*LTRCPS Trigger: TGAGGGGCATCGCGTCAGGCATGAAGTATCTTTCTG...CACCCACCGTCTCCTGTTCCGACTATGGCTGCACACCTTACGTTTATGCTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | GCATGTGAACTCGGGAGCTACTCGATCACAAAACATGGAAGAATGATCAGCTATTGGAGCATCAGCTGGTaGAGAGACGGTGGGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: ACELGSYSITKHGRMISYWSISW*RDGGQP Trigger: GGGCTGCCCACCGTCTCTGCACCAGCTGATGCTCCA...ATAGCTGATCATTCTTCCATGTTTTGTGATCGAGTAGCTCCCGAGTTCACATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | CATAGTCGGAACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGAATCAGAAGTCCTGTGTCACTGGGTaGGCTCCATTCCAAAATAAG | + |
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Preference number: 4 (lower is better) Translates to: HSRNRRRWVVKGRLENQKSCVTG*APFQNK Trigger: CTTATTTTGGAATGGAGCCCACCCAGTGACACAGGA...CTTCTGATTCTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTTCCGACTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | ATCCAGGGTGGAAGCATAAACGTAAGGTGTGCAGCCATAGTCGGAACAGGAGACAGCTCCACGCGTCACTaGCTGAGGAGAACTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: IQGGSINVRCAAIVGTGDSSTRH*LRRTFC Trigger: ACAGAAAGTTCTCCTCAGCCAGTGACGCGTGGAGCT...GTCTCCTGTTCCGACTATGGCTGCACACCTTACGTTTATGCTTCCACCCTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | AGGGAAGGCTGGAGAATCAGAAGAATGAGTCGTAGAGGGAATATCTTTCTTTGTGGTTGGAGACGTGACTaGAGTCGCCGGTCCAAGCCG | + |
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Preference number: 4 (lower is better) Translates to: REGWRIRRMSRRGNIFLCGWRRD*SRRSKP Trigger: CGGCTTGGACCGGCGACTGCAGTCACGTCTCCAACC...ACAAAGAAAGATATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCCTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | AGGGAAGGCTGGAGAATCAGAAGAATGAGTCGTAGAGGGAATATCTTTCTTTGTGGAGCTCCTGGCGGCTaGAGGCGAGGGGAATTGCAT | + |
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Preference number: 4 (lower is better) Translates to: REGWRIRRMSRRGNIFLCGAPGG*RRGELH Trigger: ATGCAATTCCCCTCGCCTCCAGCCGCCAGGAGCTCC...ACAAAGAAAGATATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCCTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | AACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGAATCAGAAGAATGAGTCGCCACAGTCCTCACACTaGGTAGTGTCTAAACCACAT | + |
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Preference number: 4 (lower is better) Translates to: NRRRWVVKGRLENQKNESPQSSH*VVSKPH Trigger: ATGTGGTTTAGACACTACCCAGTGTGAGGACTGTGG...CGACTCATTCTTCTGATTCTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | GTGTGCAGCCATAGTCGGAACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGTACTGTGACAAACAATaGATATTCAGGAACATCACC | + |
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Preference number: 4 (lower is better) Translates to: VCSHSRNRRRWVVKGRLEYCDKQ*IFRNIT Trigger: GGTGATGTTCCTGAATATCCATTGTTTGTCACAGTA...CTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTTCCGACTATGGCTGCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | CATAGTCGGAACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGAATCAGAAGTCACCCAAATCCATCTaGGTAAAACTCTCATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HSRNRRRWVVKGRLENQKSPKSI*VKLSSA Trigger: TGCTGATGAGAGTTTTACTCAGATGGATTTGGGTGA...CTTCTGATTCTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTTCCGACTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | CGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGCAGGCTATTCAGAGGTGGTCTAGTGCATaGCATAGAAGGTGGGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: RSAVMICSGPEFRLQAIQRWSSA*HRRWVF Trigger: AAAGACCCACCTTCTATGGCATGCACTAGACCACCT...CTGAATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | TTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGCAGGCTATGAAGGGCACTGGGGTTaGGGATCAGTTTGTCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LSFCSDDLQWARVSFAGYEGHWG*GSVCQG Trigger: TCCTTGACAAACTGATCCGCAACCCCAGTGCCCTTC...ATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | CTGAGTTATTTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGTAGCGTGGGGGTCCTaGACCAAGCTCTCTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LSYLSFCSDDLQWARVSFVAWGS*TKLSSS Trigger: AGAAGAAGAGAGCTTGGTTCAGGACCCCCACGCTAC...AAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAAATAACTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | TGGAAGCATAAACGTAAGGTGTGCAGCCATAGTCGGAACAGGAGACGGTGGGTGTGTTTTAATTGCAACTaGGATCTCCCTTTTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: WKHKRKVCSHSRNRRRWVCFNCN*DLPFPW Trigger: CCAGGGAAAAGGGAGATCCCAGTTGCAATTAAAACA...CACCCACCGTCTCCTGTTCCGACTATGGCTGCACACCTTACGTTTATGCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | ATCCAGGGTGGAAGCATAAACGTAAGGTGTGCAGCCATAGTCGGAACAGGAGACACTGGATGTGGCGCTTaGATGCCATTTAAAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: IQGGSINVRCAAIVGTGDTGCGA*MPFKNP Trigger: TGGGTTTTTAAATGGCATCCAAGCGCCACATCCAGT...GTCTCCTGTTCCGACTATGGCTGCACACCTTACGTTTATGCTTCCACCCTGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | AGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGGGGCAGAGAGCCTCCTaGAGTCACTGGATGTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RMISYFLLIYHQTPHTSLGQRAS*SHWMWR Trigger: GCGCCACATCCAGTGACTGCAGGAGGCTCTCTGCCC...CAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | ATCCAGGGTGGAAGCATAAACGTAAGGTGTGCAGCCATAGTCGGAACAGGAGACGGAAGAATCAACCCTTaGGATGGTATCAGGAAACAT | + |
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Preference number: 4 (lower is better) Translates to: IQGGSINVRCAAIVGTGDGRINP*DGIRKH Trigger: ATGTTTCCTGATACCATCCCAAGGGTTGATTCTTCC...GTCTCCTGTTCCGACTATGGCTGCACACCTTACGTTTATGCTTCCACCCTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | TTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGCAGGCTATTACTACGATCATTACTaGCCGACCTGCAGGAATCCT | + |
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Preference number: 4 (lower is better) Translates to: LSFCSDDLQWARVSFAGYYYDHY*PTCRNP Trigger: AGGATTCCTGCAGGTCGGCCAGTAATGATCGTAGTA...ATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | TTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGCAGGCTATTGGCCGTTCTGTAAGTaGGTTCTTCTCTTCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LSFCSDDLQWARVSFAGYWPFCK*VLLFSS Trigger: AGAAGAGAAGAGAAGAACTCACTTACAGAACGGCCA...ATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | AACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGAATCAGAAGAATGAGTCGCTTCTGACTTCATTTTaGCCTTTATGTACCATTGAC | + |
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Preference number: 4 (lower is better) Translates to: NRRRWVVKGRLENQKNESLLTSF*PLCTID Trigger: GTCAATGGTACATAAAGGCCAAAATGAAGTCAGAAG...CGACTCATTCTTCTGATTCTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | CTGAGTTATTTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGTAAGCAATAGCTTCTaGGGCTGTCCACCGTATAGG | + |
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Preference number: 4 (lower is better) Translates to: LSYLSFCSDDLQWARVSFVSNSF*GCPPYR Trigger: CCTATACGGTGGACAGCCCCAGAAGCTATTGCTTAC...AAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAAATAACTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | AGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGCAGTGGAGCATCAGCTaGTGCAGAGACGGTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RMISYFLLIYHQTPHTSLQWSIS*CRDGGQ Trigger: CTGCCCACCGTCTCTGCACCAGCTGATGCTCCACTG...CAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | TGGAAGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCACTTGGTTGGAGACGTaGCTGCAGTCGCCGGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: WKNDQLFSSYLSSNSTHVTWLET*LQSPVQ Trigger: TTGGACCGGCGACTGCAGTCACGTCTCCAACCAAGT...GACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | CGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGCAGGCTATTCAGTACAATCCCTCAGTGTaGACTTCATTTCCACATAAA | + |
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Preference number: 4 (lower is better) Translates to: RSAVMICSGPEFRLQAIQYNPSV*TSFPHK Trigger: TTTATGTGGAAATGAAGTTCACACTGAGGGATTGTA...CTGAATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR TCA 90 bp | AGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGAAGATGCCACCACGCGTCACTGGCTaGGGAGAACTTTCTGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SYFLLIYHQTPHTSLKMPPRVTG*GELSVS Trigger: GCTTACAGAAAGTTCTCCTCAGCCAGTGACGCGTGG...TGGCATCTTCAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | CTGAGTTATTTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTTGTAGAATCCTGGTCTaGAAGCATGGCAAGAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSYLSFCSDDLQWARVSFCRILV*KHGKNP Trigger: AGGGTTCTTGCCATGCTTGCAGACCAGGATTCTACA...AAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAAATAACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | AACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGAATCAGAAGAATGAGTCGCTTTATATATTGGCTTaGCTTGAATTTTGTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: NRRRWVVKGRLENQKNESLYILA*LEFCPM Trigger: CATGGGACAAAATTCAAGCCAAGCCAATATATAAAG...CGACTCATTCTTCTGATTCTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | TTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGCAGGCTATGACAAGATAACATCCTaGTTGGACATTTCCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSFCSDDLQWARVSFAGYDKITS*LDISQY Trigger: GTACTGGGAAATGTCCAACCAGGATGTTATCTTGTC...ATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | TTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGCAGGCTATTATATTGGCTTGGCTTaGATTTTGTCCCATGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LSFCSDDLQWARVSFAGYYIGLA*ILSHGI Trigger: AATCCCATGGGACAAAATTCAAGCCAAGCCAATATA...ATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | AGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGAAGATGCCATGCTTCCACGTAGGTTaGGCTGTGTGGAGGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SYFLLIYHQTPHTSLKMPCFHVG*AVWRAF Trigger: AAATGCCCTCCACACAGCTCAACCTACGTGGAAGCA...TGGCATCTTCAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | GGACAAATTCCTTTAGGTGAAGTCCATGAACACTTCCCAAACATTTCTGTACAATGGTTTCTCTCCTTCTaGCAGCAGTGGAGCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQIPLGEVHEHFPNISVQWFLSF*QQWSIS Trigger: GCTGATGCTCCACTGCTGGCAGAAGGAGAGAAACCA...TTGTACAGAAATGTTTGGGAAGTGTTCATGGACTTCACCTAAAGGAATTTGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR TCA 90 bp | CTGAGTTATTTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTCAAAAAGGAGTCCAGTaGTCCATTCTCCATATACTC | + |
|
Preference number: 4 (lower is better) Translates to: LSYLSFCSDDLQWARVSFQKGVQ*SILHIL Trigger: GAGTATATGGAGAATGGATCACTGGACTCCTTTTTG...AAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAAATAACTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | AGGGAAGGCTGGAGAATCAGAAGAATGAGTCGTAGAGGGAATATCTTTCTTTGTAAGGCTGTTCTGAGATaGCCAGTCCTTTCTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: REGWRIRRMSRRGNIFLCKAVLR*PVLSHH Trigger: ATGATGAGAAAGGACTGGGCATCTCAGAACAGCCTT...ACAAAGAAAGATATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCCTTCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR GCA 90 bp | CATGGAAGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGGCTATGACCAGAATCTaGCCTTGTTCTGCCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HGRMISYFLLIYHQTPHTAMTRI*PCSAAM Trigger: CATGGCGGCAGAACAAGGGCAGATTCTGGTCATAGC...CGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCTTCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | GGCTGGAGAATCAGAAGAATGAGTCGTAGAGGGAATATCTTTCTTTGTAGAAATGTGAAGTGGCCATCATaGTTCCGCAAAAAGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GWRIRRMSRRGNIFLCRNVKWPS*FRKKES Trigger: GGACTCCTTTTTGCGGAAGCATGATGGCCACTTCAC...ATTTCTACAAAGAAAGATATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR CCA 90 bp | GGCTGGAGAATCAGAAGAATGAGTCGTAGAGGGAATATCTTTCTTTGTAGAAATTGGATGACGGTGAAGTaGCCATCATGCTTCCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GWRIRRMSRRGNIFLCRNWMTVK*PSCFRK Trigger: TTTGCGGAAGCATGATGGCCACTTCACCGTCATCCA...ATTTCTACAAAGAAAGATATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | GCATGTGAACTCGGGAGCTACTCGATCACAAAACATGGAAGAATGATCAGCTATGATGTCAGTGAATTTTaGCCTGTGGTTTCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ACELGSYSITKHGRMISYDVSEF*PVVSLL Trigger: AAGGAGAGAAACCACAGGCCAAAATTCACTGACATC...ATAGCTGATCATTCTTCCATGTTTTGTGATCGAGTAGCTCCCGAGTTCACATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR TCA 90 bp | AGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGCACATTTCTAGGAGCTaGAGGTGGTCTAGTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RMISYFLLIYHQTPHTSLHISRS*RWSSAC Trigger: GCATGCACTAGACCACCTTCAGCTCCTAGAAATGTG...CAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | CTGAGTTATTTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTCACATAAATTTTCTGTaGAGCATCACGAGAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSYLSFCSDDLQWARVSFHINFL*SITRDP Trigger: TGGATCTCTCGTGATGCTGCACAGAAAATTTATGTG...AAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAAATAACTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | AGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGAGTCCCCAAGACCCATaGGATGCTGTTACAATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RMISYFLLIYHQTPHTSLSPQDP*DAVTIP Trigger: AGGGATTGTAACAGCATCCCATGGGTCTTGGGGACT...CAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGGCTGGAGAATCAGAAGAATGAGTCGTAGAGGGAATATCTTTCTTTGTCTCAATGCGAATTCTTaGAGGATCAATCTCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: REGWRIRRMSRRGNIFLCLNANS*RINLFC Trigger: GCAAAAGAGATTGATCCTTCAAGAATTCGCATTGAG...ACAAAGAAAGATATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCCTTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | TGGAAGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCGCGGCAAGATCTCGATaGACATATCCCATGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WKNDQLFSSYLSSNSTHVAARSR*TYPMSE Trigger: TTCTGACATGGGATATGTTCATCGAGATCTTGCCGC...GACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | GGACAAATTCCTTTAGGTGAAGTCCATGAACACTTCCCAAACATTTCTGTACAAGACCAGAGCGATGCATaGTCCAATATCTTGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQIPLGEVHEHFPNISVQDQSDA*SNILKS Trigger: GCTTTTCAAGATATTGGAGCATGCATCGCTCTGGTC...TTGTACAGAAATGTTTGGGAAGTGTTCATGGACTTCACCTAAAGGAATTTGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | GGCTGGAGAATCAGAAGAATGAGTCGTAGAGGGAATATCTTTCTTTGTAGAAATCTTCATACCCTGTACTaGAGATACACCTTCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GWRIRRMSRRGNIFLCRNLHTLY*RYTFQE Trigger: CTCTTGGAAGGTGTATCTGCAGTACAGGGTATGAAG...ATTTCTACAAAGAAAGATATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | GGACAAATTCCTTTAGGTGAAGTCCATGAACACTTCCCAAACATTTCTGTACAAATGGCTTGGGAGAGATaGTCAACTCAGAAACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQIPLGEVHEHFPNISVQMAWER*STQKLH Trigger: ATGGAGTTTCTGAGTTGAGCATCTCTCCCAAGCCAT...TTGTACAGAAATGTTTGGGAAGTGTTCATGGACTTCACCTAAAGGAATTTGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | AATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGAAGATGTGGCGCTTGGATaGCATTTAAAAACCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NDQLFSSYLSSNSTHVSEDVALG*HLKTQP Trigger: GGGCTGGGTTTTTAAATGGCATCCAAGCGCCACATC...TTCAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | GGACAAATTCCTTTAGGTGAAGTCCATGAACACTTCCCAAACATTTCTGTACAATGCTTTGTAGAATCCTaGTCTGCAAGCATGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQIPLGEVHEHFPNISVQCFVES*SASMAR Trigger: TCTTGCCATGCTTGCAGACCAGGATTCTACAAAGCA...TTGTACAGAAATGTTTGGGAAGTGTTCATGGACTTCACCTAAAGGAATTTGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | GGACAAATTCCTTTAGGTGAAGTCCATGAACACTTCCCAAACATTTCTGTACAATGTGTGGAGGGCATTTaGAACATTTTGTGTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQIPLGEVHEHFPNISVQCVEGI*NILCSQ Trigger: CTGGGAACACAAAATGTTCCAAATGCCCTCCACACA...TTGTACAGAAATGTTTGGGAAGTGTTCATGGACTTCACCTAAAGGAATTTGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | CATGGAAGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTGGTTTGGTTCCATaGCATTGCATACCTGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: HGRMISYFLLIYHQTPHTSGLVP*HCIPGM Trigger: CATACCAGGTATGCAATGTCATGGAACCAAACCAGA...CGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCTTCCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | AGGGAAGGCTGGAGAATCAGAAGAATGAGTCGTAGAGGGAATATCTTTCTTTGTTTTCAAAGGTATAATTaGCGTGAGACACAAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: REGWRIRRMSRRGNIFLCFQRYN*RETQSP Trigger: TGGACTTTGTGTCTCACGTCAATTATACCTTTGAAA...ACAAAGAAAGATATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCCTTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | GGCTGGAGAATCAGAAGAATGAGTCGTAGAGGGAATATCTTTCTTTGTAGAAATTGTGTTCCCAGCAAATaGTTTGTAGAATCCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GWRIRRMSRRGNIFLCRNCVPSK*FVESWS Trigger: AGACCAGGATTCTACAAAGCATTTGCTGGGAACACA...ATTTCTACAAAGAAAGATATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | AGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGTCTTCAAACGCCCACTaGAGACTTCTCCAAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RMISYFLLIYHQTPHTSLSSNAH*RLLQIH Trigger: GTGAATTTGGAGAAGTCTGCAGTGGGCGTTTGAAGA...CAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | GGCTGGAGAATCAGAAGAATGAGTCGTAGAGGGAATATCTTTCTTTGTAGAAATCCTTGCATACTAAGTTaGTGTTCACCAGTATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GWRIRRMSRRGNIFLCRNPCILS*CSPVCS Trigger: GGAACATACTGGTGAACAGCAACTTAGTATGCAAGG...ATTTCTACAAAGAAAGATATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | AGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGCTGACTATTCGTCTCTaGTGTCCAATGAGAATGACT | + |
|
Preference number: 4 (lower is better) Translates to: RMISYFLLIYHQTPHTSLLTIRL*CPMRMT Trigger: AGTCATTCTCATTGGACATCAGAGACGAATAGTCAG...CAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | AGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGAAGTTTGTATGCTGCTaGCTATTCGTCTCTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RMISYFLLIYHQTPHTSLKFVCC*LFVSDV Trigger: GACATCAGAGACGAATAGTCAGCAGCATACAAACTT...CAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | AGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGTTCTCCAAATTCACCTaGTCCAATCACTCTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RMISYFLLIYHQTPHTSLFSKFT*SNHSLN Trigger: ATTGAGAGAGTGATTGGAGCAGGTGAATTTGGAGAA...CAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CCA 90 bp | AATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGAAGTTCTCCCATCACTGTaGTTGTATCAAGCAACACAA | + |
|
Preference number: 4 (lower is better) Translates to: NDQLFSSYLSSNSTHVSEVLPSL*LYQATQ Trigger: TTGTGTTGCTTGATACAACCACAGTGATGGGAGAAC...TTCAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR TCA 90 bp | TGGAAGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTTCTCTTCTCTTCTaGCTTCATTTTGGCCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: WKNDQLFSSYLSSNSTHVSSLLF*LHFGLY Trigger: ATAAAGGCCAAAATGAAGTCAGAAGAGAAGAGAAGA...GACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCTTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR GCA 90 bp | AGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGAAGATGCCAAAGTTACTCTTGTATTaGCCCATCTTTATAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SYFLLIYHQTPHTSLKMPKLLLY*PIFIES Trigger: GGATTCTATAAAGATGGGGCAATACAAGAGTAACTT...TGGCATCTTCAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS GCA 90 bp | GCGCGAGGCCCGGTGCGCAGGGCACGAGGGTCCAGGCTGCCCAGGTaGTGGAGCAGCTGCTTGCGGGGACGATGCTGCCTGCGCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ARGPVRRARGSRLPR*WSSCLRGRCCLRRR Trigger: CCGGCGGCGCAGGCAGCATCGTCCCCGCAAGCAGCTGCTCCAGCACCTGGGCAGCCTGGACCCTCGTGCCCTGCGCACCGGGCCTCGCGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS CCA 90 bp | CGAGGCCCGGTGCGCAGGGCACGAGGGTCCAGGCTGCCCAGGTGCTaGAGCAGCTGCTTGCGGGGACGATGCTGCCTGCGCCGCCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RGPVRRARGSRLPRC*SSCLRGRCCLRRRG Trigger: TCCCCGGCGGCGCAGGCAGCATCGTCCCCGCAAGCAGCTGCTCCAGCACCTGGGCAGCCTGGACCCTCGTGCCCTGCGCACCGGGCCTCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS GCA 90 bp | GCAGGGCACGAGGGTCCAGGCTGCCCAGGTGCTGGAGCAGCTGCTTaGGGGGACGATGCTGCCTGCGCCGCCGGGGAGCTCCTGGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGHEGPGCPGAGAAA*GDDAACAAGELLAA Trigger: AGCCGCCAGGAGCTCCCCGGCGGCGCAGGCAGCATCGTCCCCGCAAGCAGCTGCTCCAGCACCTGGGCAGCCTGGACCCTCGTGCCCTGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS GCA 90 bp | GTGCGCAGGGCACGAGGGTCCAGGCTGCCCAGGTGCTGGAGCAGCTaGTTGCGGGGACGATGCTGCCTGCGCCGCCGGGGAGCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VRRARGSRLPRCWSS*LRGRCCLRRRGAPG Trigger: GCCAGGAGCTCCCCGGCGGCGCAGGCAGCATCGTCCCCGCAAGCAGCTGCTCCAGCACCTGGGCAGCCTGGACCCTCGTGCCCTGCGCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS CCA 90 bp | AAATATGTACGTGGTGGCGGGCTTGAGGCCCGTGACGATGACGCTTaGGGCCTTGGACCTCGTGGAGGAATAGGTGAGCTGCTCATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KYVRGGGLEARDDDA*GLGPRGGIGELLML Trigger: GAGCATGAGCAGCTCACCTATTCCTCCACGAGGTCCAAGGCCCCAAGCGTCATCGTCACGGGCCTCAAGCCCGCCACCACGTACATATTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS CCA 90 bp | CCATATACTCTACTACGATCATTACTGGCCGACCTGCAGGAATCCTaGGGGGCAGAGAGCCTCCTGCAGTCACTGGATGTGGCGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PYTLLRSLLADLQES*GAESLLQSLDVALG Trigger: TCCAAGCGCCACATCCAGTGACTGCAGGAGGCTCTCTGCCCCCCAGGATTCCTGCAGGTCGGCCAGTAATGATCGTAGTAGAGTATATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS TCA 90 bp | TCACCAGGGGATTCTGGCATTACAAGGATGTCCTCCACCAGCGTGTaGAGGGCACTGGGGTTGCGGATCAGTTTGTCAAGGAAGCTGACG | + |
|
Preference number: 5 (lower is better) Translates to: SPGDSGITRMSSTSV*RALGLRISLSRKLT Trigger: CGTCAGCTTCCTTGACAAACTGATCCGCAACCCCAGTGCCCTTCACACGCTGGTGGAGGACATCCTTGTAATGCCAGAATCCCCTGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS GCA 90 bp | AAGAGAGTGAATCCCCCGACGGCTGCAGTGGCTATGACCAGAATCTaGCCTTGTTCTGCCGCCATGTCAGAAGTTTCATCTCCTGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KRVNPPTAAVAMTRI*PCSAAMSEVSSPVS Trigger: TGAAACAGGAGATGAAACTTCTGACATGGCGGCAGAACAAGGGCAGATTCTGGTCATAGCCACTGCAGCCGTCGGGGGATTCACTCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCATAAACGTAAGGTGTGCAGCCATAGTCGGAACAGGAGACGGTGGGTGATAGCTGTGAATGGCTaGGGAGAGATGCTCAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: WKHKRKVCSHSRNRRRWVIAVNG*GEMLNS Trigger: TGAGTTGAGCATCTCTCCCAAGCCATTCACAGCTAT...CACCCACCGTCTCCTGTTCCGACTATGGCTGCACACCTTACGTTTATGCTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR CAA 90 bp | TTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGCAGGCTATGACCAGAATCTGCCCTaGTTCTGCCGCCATGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSFCSDDLQWARVSFAGYDQNLP*FCRHVR Trigger: TCTGACATGGCGGCAGAACAAGGGCAGATTCTGGTC...ATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS GCA 90 bp | GTCTGCAAGCATGGCAAGAACCCTCGATTTCTTCATACCCTGTACTaGAGATACACCTTCCAAGAGGAACAAGCCAATCCCCATCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VCKHGKNPRFLHTLY*RYTFQEEQANPHQL Trigger: GAGCTGATGGGGATTGGCTTGTTCCTCTTGGAAGGTGTATCTGCAGTACAGGGTATGAAGAAATCGAGGGTTCTTGCCATGCTTGCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS CCA 90 bp | AAAGTCCAGTACTACCACAGAATTGTTGATCAGTCCAGTGTGTCTTaGGATGAAGCGGAGTCCTCCACCACAGTCCTCACACTGGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: KVQYYHRIVDQSSVS*DEAESSTTVLTLGS Trigger: ACTACCCAGTGTGAGGACTGTGGTGGAGGACTCCGCTTCATCCCAAGACACACTGGACTGATCAACAATTCTGTGGTAGTACTGGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CAA 90 bp | AACAGGAGACGGTGGGTGGTGAAGGGAAGGCTGGAGAATCAGAAGAATGAGTCGAAGATAACATCCTGGTaGGACATTTCCCAGTACGGT | + |
|
Preference number: 5 (lower is better) Translates to: NRRRWVVKGRLENQKNESKITSW*DISQYG Trigger: ACCGTACTGGGAAATGTCCAACCAGGATGTTATCTT...CGACTCATTCTTCTGATTCTCCAGCCTTCCCTTCACCACCCACCGTCTCCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CAA 90 bp | TTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGCAGGCTATGGGTTGCGGATCAGTTaGTCAAGGAAGCTGACGATG | + |
|
Preference number: 5 (lower is better) Translates to: LSFCSDDLQWARVSFAGYGLRIS*SRKLTM Trigger: CATCGTCAGCTTCCTTGACAAACTGATCCGCAACCC...ATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS TCA 90 bp | CCATTGGAAAATGCAGGTGCTTGCCACGATAGAGCAAGGCTGTTCTaGGATGCCCAGTCCTTTCTCATCATACCAATCAGAGAAGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLENAGACHDRARLF*DAQSFLIIPIREGA Trigger: TGCACCTTCTCTGATTGGTATGATGAGAAAGGACTGGGCATCTCAGAACAGCCTTGCTCTATCGTGGCAAGCACCTGCATTTTCCAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR CAA 90 bp | TTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGCAGGCTATGGCCTTTATGTACCATaGACACCTCCCAGTGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSFCSDDLQWARVSFAGYGLYVP*TPPSDE Trigger: CTCATCACTGGGAGGTGTCAATGGTACATAAAGGCC...ATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CCA 90 bp | AGACTGACGTTGCTTCCACGTAGGTTGAGCTGTGTGGAGGGCATTTaGAACATTTTGTGTTCCCAGCAAATGCTTTGTAGAATCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RLTLLPRRLSCVEGI*NILCSQQMLCRILV Trigger: GACCAGGATTCTACAAAGCATTTGCTGGGAACACAAAATGTTCCAAATGCCCTCCACACAGCTCAACCTACGTGGAAGCAACGTCAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS CCA 90 bp | GTGTGTCTTGGGATGAAGCGGAGTCCTCCACCACAGTCCTCACACTaGGTAGTGTCTAAACCACATTTCTTACAGATTACACTGTATGTG | + |
|
Preference number: 5 (lower is better) Translates to: VCLGMKRSPPPQSSH*VVSKPHFLQITLYV Trigger: CACATACAGTGTAATCTGTAAGAAATGTGGTTTAGACACTACCCAGTGTGAGGACTGTGGTGGAGGACTCCGCTTCATCCCAAGACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR CAA 90 bp | TTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGCAGGCTATCTGTGTGGAGGGCATTaGGAACATTTTGTGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSFCSDDLQWARVSFAGYLCGGH*EHFVFP Trigger: TGGGAACACAAAATGTTCCAAATGCCCTCCACACAG...ATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCATAAACGTAAGGTGTGCAGCCATAGTCGGAACAGGAGACGGTGGGTGTCTCAATGCGAATTCTaGAAGGATCAATCTCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WKHKRKVCSHSRNRRRWVSQCEF*KDQSLL Trigger: CAAAAGAGATTGATCCTTCAAGAATTCGCATTGAGA...CACCCACCGTCTCCTGTTCCGACTATGGCTGCACACCTTACGTTTATGCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR CAA 90 bp | GGACAAATTCCTTTAGGTGAAGTCCATGAACACTTCCCAAACATTTCTGTACAACCCCCATGGCTCTGGTaGGTTCTCTTCTCCTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GQIPLGEVHEHFPNISVQPPWLW*VLFSSL Trigger: TAAGGAGGAGAAGAGAACCAACCAGAGCCATGGGGG...TTGTACAGAAATGTTTGGGAAGTGTTCATGGACTTCACCTAAAGGAATTTGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR CAA 90 bp | TTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGCAGGCTATGGCATTTGGAACATTTaGTGTTCCCAGCAAATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSFCSDDLQWARVSFAGYGIWNI*CSQQML Trigger: AAGCATTTGCTGGGAACACAAAATGTTCCAAATGCC...ATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS CCA 90 bp | CCCCATCTTTATAGAATCCAGCCAGTCACCTACTGTGACAAACAATaGATATTCAGGAACATCACCAGGGGATTCTGGCATTACAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PHLYRIQPVTYCDKQ*IFRNITRGFWHYKD Trigger: ATCCTTGTAATGCCAGAATCCCCTGGTGATGTTCCTGAATATCCATTGTTTGTCACAGTAGGTGACTGGCTGGATTCTATAAAGATGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR CAA 90 bp | TTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGCAGGCTATGTATGTATGGGCCTATaGTGTTCATCCATTTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LSFCSDDLQWARVSFAGYVCMGL*CSSISV Trigger: TACTGAAATGGATGAACACAATAGGCCCATACATAC...ATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR CAA 90 bp | GGCTGGAGAATCAGAAGAATGAGTCGTAGAGGGAATATCTTTCTTTGTAGAAATTTGCTTCCACGTAGGTaGAGCTGTGTGGAGGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: GWRIRRMSRRGNIFLCRNLLPRR*SCVEGI Trigger: AATGCCCTCCACACAGCTCAACCTACGTGGAAGCAA...ATTTCTACAAAGAAAGATATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR CAA 90 bp | TTATCGTTCTGCAGTGATGATCTGCAGTGGGCCAGAGTTTCGTTTGCAGGCTATGCCATGAAGTTACTCTaGTATTGCCCCATCTTTATA | + |
|
Preference number: 5 (lower is better) Translates to: LSFCSDDLQWARVSFAGYAMKLL*YCPIFI Trigger: TATAAAGATGGGGCAATACAAGAGTAACTTCATGGC...ATAGCCTGCAAACGAAACTCTGGCCCACTGCAGATCATCACTGCAGAACGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS GCA 90 bp | AGATCAAACGTTGTAAAACCCGCTGCCATGAAGTTACTCTTGTATTaGCCCATCTTTATAGAATCCAGCCAGTCACCTACTGTGACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RSNVVKPAAMKLLLY*PIFIESSQSPTVTN Trigger: GTTTGTCACAGTAGGTGACTGGCTGGATTCTATAAAGATGGGGCAATACAAGAGTAACTTCATGGCAGCGGGTTTTACAACGTTTGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CCA 90 bp | ACCCATTTAATGGATATGTTTTCCATCCTAGTTCTCCCATCACTGTaGTTGTATCAAGCAACACAACTTGGTTGGAGACGTGACTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: THLMDMFSILVLPSL*LYQATQLGWRRDCS Trigger: ACTGCAGTCACGTCTCCAACCAAGTTGTGTTGCTTGATACAACCACAGTGATGGGAGAACTAGGATGGAAAACATATCCATTAAATGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR CAA 90 bp | GGACAAATTCCTTTAGGTGAAGTCCATGAACACTTCCCAAACATTTCTGTACAATCCAGAATAGCTCCATaGGAAAATGCAGGTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GQIPLGEVHEHFPNISVQSRIAP*ENAGAC Trigger: GCAAGCACCTGCATTTTCCAATGGAGCTATTCTGGA...TTGTACAGAAATGTTTGGGAAGTGTTCATGGACTTCACCTAAAGGAATTTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS-3UTR CAA 90 bp | GGCTGGAGAATCAGAAGAATGAGTCGTAGAGGGAATATCTTTCTTTGTAGAAATTTTTCCCTCCCGTTGTaGTATAAGCTGCTTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GWRIRRMSRRGNIFLCRNFSLPL*YKLLLD Trigger: ATCCAGAAGCAGCTTATACAACAACGGGAGGGAAAA...ATTTCTACAAAGAAAGATATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CAA 90 bp | TGGAAGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTTAGTACGAAGCCAGTaGTTCTGGTTTGGTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: WKNDQLFSSYLSSNSTHVLVRSQ*FWFGSM Trigger: CATGGAACCAAACCAGAACAACTGGCTTCGTACTAA...GACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CAA 90 bp | AGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGTCACGGATTTCAGTGTaGAGTTTAAGGATGCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RMISYFLLIYHQTPHTSLSRISV*SLRMRS Trigger: TGACCGCATCCTTAAACTCAACACTGAAATCCGTGA...CAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CAA 90 bp | AGAATGATCAGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGAGGAAGAATCAACCCTaGGGATGGTATCAGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: RMISYFLLIYHQTPHTSLRKNQP*GWYQET Trigger: TGTTTCCTGATACCATCCCAAGGGTTGATTCTTCCT...CAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCTGATCATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS TCA 90 bp | ATCATATGTAAACGTAAAGTTTGTATGCTGCTGACTATTCGTCTCTaGTGTCCAATGAGAATGACTCCAATTCGCCTAATATCATCGATG | + |
|
Preference number: 5 (lower is better) Translates to: IICKRKVCMLLTIRL*CPMRMTPIRLISSM Trigger: CATCGATGATATTAGGCGAATTGGAGTCATTCTCATTGGACATCAGAGACGAATAGTCAGCAGCATACAAACTTTACGTTTACATATGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CAA 90 bp | AGCTATTTTCTTCTTATCTATCATCAAACTCCACACACGTCTCTGAAGATGCCAGCATGCTCCAATATCTaGAAAAGCCAAATAAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: SYFLLIYHQTPHTSLKMPACSNI*KSQIKS Trigger: GGATTTTATTTGGCTTTTCAAGATATTGGAGCATGC...TGGCATCTTCAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAATAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS-3UTR CAA 90 bp | GGCTGGAGAATCAGAAGAATGAGTCGTAGAGGGAATATCTTTCTTTGTAGAAATGAAGTTACTCTTGTATaGCCCCATCTTTATAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: GWRIRRMSRRGNIFLCRNEVTLV*PHLYRI Trigger: GATTCTATAAAGATGGGGCAATACAAGAGTAACTTC...ATTTCTACAAAGAAAGATATTCCCTCTACGACTCATTCTTCTGATTCTCCAGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS GCA 72 bp | CCCAGGTGCTGGAGCAGCTGCTTGCGGGGACGATGCTaGCTGCGCCGCCGGGGAGCTCCTGGCGGCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PRCWSSCLRGRC*LRRRGAPGGWR Trigger: CCTCCAGCCGCCAGGAGCTCCCCGGCGGCGCAGGCAGCATCGTCCCCGCAAGCAGCTGCTCCAGCACCTGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS GCA 72 bp | CTGCCCAGGTGCTGGAGCAGCTGCTTGCGGGGACGATaGTGCCTGCGCCGCCGGGGAGCTCCTGGCGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPRCWSSCLRGR*CLRRRGAPGGW Trigger: CCAGCCGCCAGGAGCTCCCCGGCGGCGCAGGCAGCATCGTCCCCGCAAGCAGCTGCTCCAGCACCTGGGCAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CCA 72 bp | CGTGGTGGCGGGCTTGAGGCCCGTGACGATGACGCTTaGGGCCTTGGACCTCGTGGAGGAATAGGTGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGGGLEARDDDA*GLGPRGGIGEL Trigger: CAGCTCACCTATTCCTCCACGAGGTCCAAGGCCCCAAGCGTCATCGTCACGGGCCTCAAGCCCGCCACCACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS TCA 72 bp | GTGGTTGTATCAAGCAACACAACTTGGTTGGAGACGTaGCTGCAGTCGCCGGTCCAAGCCGTTAGCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VVVSSNTTWLET*LQSPVQAVSRG Trigger: GCCCCTGCTAACGGCTTGGACCGGCGACTGCAGTCACGTCTCCAACCAAGTTGTGTTGCTTGATACAACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS GCA 72 bp | GAGAGCCTCCTGCAGTCACTGGATGTGGCGCTTGGATaGCATTTAAAAACCCAGCCCTTAGGAAGCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ESLLQSLDVALG*HLKTQPLGSWG Trigger: GCCCCAGCTTCCTAAGGGCTGGGTTTTTAAATGGCATCCAAGCGCCACATCCAGTGACTGCAGGAGGCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CAA 72 bp | CCCGACGGCTGCAGTGGCTATGACCAGAATCTGCCCTaGTTCTGCCGCCATGTCAGAAGTTTCATCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PDGCSGYDQNLP*FCRHVRSFISC Trigger: ACAGGAGATGAAACTTCTGACATGGCGGCAGAACAAGGGCAGATTCTGGTCATAGCCACTGCAGCCGTCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS TCA 72 bp | GATTCTGGCATTACAAGGATGTCCTCCACCAGCGTGTaGAGGGCACTGGGGTTGCGGATCAGTTTGTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: DSGITRMSSTSV*RALGLRISLSR Trigger: CCTTGACAAACTGATCCGCAACCCCAGTGCCCTTCACACGCTGGTGGAGGACATCCTTGTAATGCCAGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS GCA 72 bp | TTGTATCAAGCAACACAACTTGGTTGGAGACGTGACTaGAGTCGCCGGTCCAAGCCGTTAGCAGGGGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LYQATQLGWRRD*SRRSKPLAGAR Trigger: TCTTGCCCCTGCTAACGGCTTGGACCGGCGACTGCAGTCACGTCTCCAACCAAGTTGTGTTGCTTGATACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS GCA 72 bp | AATCCCCCGACGGCTGCAGTGGCTATGACCAGAATCTaGCCTTGTTCTGCCGCCATGTCAGAAGTTTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: NPPTAAVAMTRI*PCSAAMSEVSS Trigger: AGATGAAACTTCTGACATGGCGGCAGAACAAGGGCAGATTCTGGTCATAGCCACTGCAGCCGTCGGGGGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CCA 72 bp | GCTCTGGTTGGTTCTCTTCTCCTCCTTAAAAAGAAGTaGCAGCAGCGCAGCCAGGTGTTCCTAGTAGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ALVGSLLLLKKK*QQRSQVFLVAW Trigger: CCACGCTACTAGGAACACCTGGCTGCGCTGCTGCCACTTCTTTTTAAGGAGGAGAAGAGAACCAACCAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CAA 90 bp | AGTGAATCCCCCGACGGCTGCAGTGGCTATGACCAGAATCTGCCCTaGTTCTGCCGCCATGTCAGAAGTTTCATCTCCTGTTTCAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: SESPDGCSGYDQNLP*FCRHVRSFISCFKF Trigger: GAATTTGAAACAGGAGATGAAACTTCTGACATGGCGGCAGAACAAGGGCAGATTCTGGTCATAGCCACTGCAGCCGTCGGGGGATTCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS CCA 72 bp | GCCCCGCACTTCAACCAAAGAGGAAGAATCAACCCTTaGGATGGTATCAGGAAACATAGCCAAGTTCCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: APHFNQRGRINP*DGIRKHSQVPH Trigger: GTGCGGAACTTGGCTATGTTTCCTGATACCATCCCAAGGGTTGATTCTTCCTCTTTGGTTGAAGTGCGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS CAA 72 bp | CCCGGAAGTAACCCTTTTCACAATGACAGACTGACGTaGCTTCCACGTAGGTTGAGCTGTGTGGAGGGCATT | + |
|
Preference number: 6 (lower is better) Translates to: PGSNPFHNDRLT*LPRRLSCVEGI Trigger: AATGCCCTCCACACAGCTCAACCTACGTGGAAGCAACGTCAGTCTGTCATTGTGAAAAGGGTTACTTCCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS GCA 72 bp | GGCTGCAGTGGCTATGACCAGAATCTGCCCTTGTTCTaGCGCCATGTCAGAAGTTTCATCTCCTGTTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GCSGYDQNLPLF*RHVRSFISCFK Trigger: TTTGAAACAGGAGATGAAACTTCTGACATGGCGGCAGAACAAGGGCAGATTCTGGTCATAGCCACTGCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS CCA 72 bp | TACTACCACAGAATTGTTGATCAGTCCAGTGTGTCTTaGGATGAAGCGGAGTCCTCCACCACAGTCCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: YYHRIVDQSSVS*DEAESSTTVLT Trigger: TGTGAGGACTGTGGTGGAGGACTCCGCTTCATCCCAAGACACACTGGACTGATCAACAATTCTGTGGTAGTA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS TCA 72 bp | AATGCAGGTGCTTGCCACGATAGAGCAAGGCTGTTCTaGGATGCCCAGTCCTTTCTCATCATACCAATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: NAGACHDRARLF*DAQSFLIIPIR Trigger: TCTGATTGGTATGATGAGAAAGGACTGGGCATCTCAGAACAGCCTTGCTCTATCGTGGCAAGCACCTGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS GCA 72 bp | CATGGCAAGAACCCTCGATTTCTTCATACCCTGTACTaGAGATACACCTTCCAAGAGGAACAAGCCAATCCC | + |
|
Preference number: 6 (lower is better) Translates to: HGKNPRFLHTLY*RYTFQEEQANP Trigger: GGGATTGGCTTGTTCCTCTTGGAAGGTGTATCTGCAGTACAGGGTATGAAGAAATCGAGGGTTCTTGCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS CCA 72 bp | GTCCATGTGGCCACCTTTCAATGTTTTAATTGCAACTaGGATCTCCCTTTTCCCTGGTGTCTTCAAACGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VHVATFQCFNCN*DLPFPWCLQTP Trigger: GGGCGTTTGAAGACACCAGGGAAAAGGGAGATCCCAGTTGCAATTAAAACATTGAAAGGTGGCCACATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS CAA 90 bp | CTTTTTCTGCCCGGAAGTAACCCTTTTCACAATGACAGACTGACGTaGCTTCCACGTAGGTTGAGCTGTGTGGAGGGCATTTGGAACATT | + |
|
Preference number: 6 (lower is better) Translates to: LFLPGSNPFHNDRLT*LPRRLSCVEGIWNI Trigger: AATGTTCCAAATGCCCTCCACACAGCTCAACCTACGTGGAAGCAACGTCAGTCTGTCATTGTGAAAAGGGTTACTTCCGGGCAGAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS CAA 90 bp | TTGCTTCCACGTAGGTTGAGCTGTGTGGAGGGCATTTGGAACATTTaGTGTTCCCAGCAAATGCTTTGTAGAATCCTGGTCTGCAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LLPRRLSCVEGIWNI*CSQQMLCRILVCKH Trigger: ATGCTTGCAGACCAGGATTCTACAAAGCATTTGCTGGGAACACAAAATGTTCCAAATGCCCTCCACACAGCTCAACCTACGTGGAAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
||
| CDS CAA 90 bp | AGTAACCCTTTTCACAATGACAGACTGACGTTGCTTCCACGTAGGTaGAGCTGTGTGGAGGGCATTTGGAACATTTTGTGTTCCCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SNPFHNDRLTLLPRR*SCVEGIWNILCSQQ Trigger: TTGCTGGGAACACAAAATGTTCCAAATGCCCTCCACACAGCTCAACCTACGTGGAAGCAACGTCAGTCTGTCATTGTGAAAAGGGTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CAA 90 bp | CCTGTGTCACTGGGTGGGCTCCATTCCAAAATAAGGGCTGTTTCATaGATGTTAAAAGCCACATTTCTAGGAGCTGAAGGTGGTCTAGTG | + |
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Preference number: 6 (lower is better) Translates to: PVSLGGLHSKIRAVS*MLKATFLGAEGGLV Trigger: CACTAGACCACCTTCAGCTCCTAGAAATGTGGCTTTTAACATCAATGAAACAGCCCTTATTTTGGAATGGAGCCCACCCAGTGACACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS TCA 72 bp | TTCTCTTCTGACTTCATTTTGGCCTTTATGTACCATTaGCACCTCCCAGTGATGAGGAAGAACAGGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: FSSDFILAFMYH*HLPVMRKNRVR Trigger: CCTCACCCTGTTCTTCCTCATCACTGGGAGGTGTCAATGGTACATAAAGGCCAAAATGAAGTCAGAAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS GCA 72 bp | TGGAGGGCATTTGGAACATTTTGTGTTCCCAGCAAATaGTTTGTAGAATCCTGGTCTGCAAGCATGGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: WRAFGTFCVPSK*FVESWSASMAR Trigger: TCTTGCCATGCTTGCAGACCAGGATTCTACAAAGCATTTGCTGGGAACACAAAATGTTCCAAATGCCCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS GCA 72 bp | TTGTCGGTCCATGTGGCCACCTTTCAATGTTTTAATTaGAACTGGGATCTCCCTTTTCCCTGGTGTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: LSVHVATFQCFN*NWDLPFPWCLQ Trigger: TTGAAGACACCAGGGAAAAGGGAGATCCCAGTTGCAATTAAAACATTGAAAGGTGGCCACATGGACCGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CCA 72 bp | TTGCTTCCACGTAGGTTGAGCTGTGTGGAGGGCATTTaGAACATTTTGTGTTCCCAGCAAATGCTTTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: LLPRRLSCVEGI*NILCSQQMLCR Trigger: TCTACAAAGCATTTGCTGGGAACACAAAATGTTCCAAATGCCCTCCACACAGCTCAACCTACGTGGAAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CCA 72 bp | GTATGTGAGATCTTTTCTCCCTCCTGTGTCACTGGGTaGGCTCCATTCCAAAATAAGGGCTGTTTCATTGAT | + |
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Preference number: 6 (lower is better) Translates to: VCEIFSPSCVTG*APFQNKGCFID Trigger: ATCAATGAAACAGCCCTTATTTTGGAATGGAGCCCACCCAGTGACACAGGAGGGAGAAAAGATCTCACATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CAA 72 bp | TTTCACAATGACAGACTGACGTTGCTTCCACGTAGGTaGAGCTGTGTGGAGGGCATTTGGAACATTTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: FHNDRLTLLPRR*SCVEGIWNILC Trigger: ACACAAAATGTTCCAAATGCCCTCCACACAGCTCAACCTACGTGGAAGCAACGTCAGTCTGTCATTGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CAA 72 bp | CGTTGTAAAACCCGCTGCCATGAAGTTACTCTTGTATaGCCCCATCTTTATAGAATCCAGCCAGTCACCTAC | + |
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Preference number: 6 (lower is better) Translates to: RCKTRCHEVTLV*PHLYRIQPVTY Trigger: GTAGGTGACTGGCTGGATTCTATAAAGATGGGGCAATACAAGAGTAACTTCATGGCAGCGGGTTTTACAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CAA 90 bp | CATTTAATGGATATGTTTTCCATCCTAGTTCTCCCATCACTGTGGTaGTATCAAGCAACACAACTTGGTTGGAGACGTGACTGCAGTCGC | + |
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Preference number: 6 (lower is better) Translates to: HLMDMFSILVLPSLW*YQATQLGWRRDCSR Trigger: GCGACTGCAGTCACGTCTCCAACCAAGTTGTGTTGCTTGATACAACCACAGTGATGGGAGAACTAGGATGGAAAACATATCCATTAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CCA 72 bp | ACATTTTGTGTTCCCAGCAAATGCTTTGTAGAATCCTaGTCTGCAAGCATGGCAAGAACCCTCGATTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TFCVPSKCFVES*SASMARTLDFF Trigger: GAAGAAATCGAGGGTTCTTGCCATGCTTGCAGACCAGGATTCTACAAAGCATTTGCTGGGAACACAAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CCA 72 bp | TATAGAATCCAGCCAGTCACCTACTGTGACAAACAATaGATATTCAGGAACATCACCAGGGGATTCTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: YRIQPVTYCDKQ*IFRNITRGFWH Trigger: ATGCCAGAATCCCCTGGTGATGTTCCTGAATATCCATTGTTTGTCACAGTAGGTGACTGGCTGGATTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CAA 72 bp | GATATGTTTTCCATCCTAGTTCTCCCATCACTGTGGTaGTATCAAGCAACACAACTTGGTTGGAGACGTGAC | + |
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Preference number: 6 (lower is better) Translates to: DMFSILVLPSLW*YQATQLGWRRD Trigger: GTCACGTCTCCAACCAAGTTGTGTTGCTTGATACAACCACAGTGATGGGAGAACTAGGATGGAAAACATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CAA 90 bp | CAGATCAAACGTTGTAAAACCCGCTGCCATGAAGTTACTCTTGTATaGCCCCATCTTTATAGAATCCAGCCAGTCACCTACTGTGACAAA | + |
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Preference number: 6 (lower is better) Translates to: QIKRCKTRCHEVTLV*PHLYRIQPVTYCDK Trigger: TTTGTCACAGTAGGTGACTGGCTGGATTCTATAAAGATGGGGCAATACAAGAGTAACTTCATGGCAGCGGGTTTTACAACGTTTGATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CAA 90 bp | GAAATCAGATCAAACGTTGTAAAACCCGCTGCCATGAAGTTACTCTaGTATTGCCCCATCTTTATAGAATCCAGCCAGTCACCTACTGTG | + |
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Preference number: 6 (lower is better) Translates to: EIRSNVVKPAAMKLL*YCPIFIESSQSPTV Trigger: CACAGTAGGTGACTGGCTGGATTCTATAAAGATGGGGCAATACAAGAGTAACTTCATGGCAGCGGGTTTTACAACGTTTGATCTGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS TCA 72 bp | TCCTTTCTCATCATACCAATCAGAGAAGGTGCATCGTaGTCTGTAGTCACTGTAATAGCTGTGAATGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SFLIIPIREGAS*SVVTVIAVNGL Trigger: CAAGCCATTCACAGCTATTACAGTGACTACAGATCACGATGCACCTTCTCTGATTGGTATGATGAGAAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CCA 72 bp | ATGGATATGTTTTCCATCCTAGTTCTCCCATCACTGTaGTTGTATCAAGCAACACAACTTGGTTGGAGACGT | + |
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Preference number: 6 (lower is better) Translates to: MDMFSILVLPSL*LYQATQLGWRR Trigger: ACGTCTCCAACCAAGTTGTGTTGCTTGATACAACCACAGTGATGGGAGAACTAGGATGGAAAACATATCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS CCA 72 bp | ATCAGCAGCAATTGTGTCGATCTTTATATATTGGCTTaGCTTGAATTTTGTCCCATGGGATTCATCGGATTC | + |
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Preference number: 6 (lower is better) Translates to: ISSNCVDLYILA*LEFCPMGFIGF Trigger: GAATCCGATGAATCCCATGGGACAAAATTCAAGCCAAGCCAATATATAAAGATCGACACAATTGCTGCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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| CDS TCA 72 bp | AAACGTAAAGTTTGTATGCTGCTGACTATTCGTCTCTaGTGTCCAATGAGAATGACTCCAATTCGCCTAATA | + |
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Preference number: 6 (lower is better) Translates to: KRKVCMLLTIRL*CPMRMTPIRLI Trigger: TATTAGGCGAATTGGAGTCATTCTCATTGGACATCAGAGACGAATAGTCAGCAGCATACAAACTTTACGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068860.13 |
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