Pregenerated sensors for EPHA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052504Ensembl transcript IDs: ENSMUST00000064405.8, ENSMUST00000231270.2, ENSMUST00000232049.2, ENSMUST00000232461.2, ENSMUST00000232654.2
Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAGAGACGTATTTCGTACAGCACTGTTTGAACCATCTTGTTCTGTaGCACACACATCCCTTGATCCTATGGAATGATACTATCAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: IETYFVQHCLNHLVL*HTHPLILWNDTISK Trigger: CTTGCTGATAGTATCATTCCATAGGATCAAGGGATGTGTGTGTCACAGAACAAGATGGTTCAAACAGTGCTGTACGAAATACGTCTCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR GCA 90 bp | GCATTTGGACTTATAACTGAGTGTCTTATTAGACTTGGAGCTTTCTaGAGCATCTTATTTATCATTTCCATCTGTCTGCAGGATGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: AFGLITECLIRLGAF*SILFIISICLQDAA Trigger: AGCAGCATCCTGCAGACAGATGGAAATGATAAATAAGATGCTGCAGAAAGCTCCAAGTCTAATAAGACACTCAGTTATAAGTCCAAATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR GCA 90 bp | ATCTGCCTCTATGATTGGAAGCTGTATTTCTTTAGTGTCCCTTTTTaGATAGAGACGTATTTCGTACAGCACTGTTTGAACCATCTTGTT | + |
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Preference number: 1 (lower is better) Translates to: ICLYDWKLYFFSVPF*IETYFVQHCLNHLV Trigger: AACAAGATGGTTCAAACAGTGCTGTACGAAATACGTCTCTATGCAAAAAGGGACACTAAAGAAATACAGCTTCCAATCATAGAGGCAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR TCA 90 bp | GAACCATCTTGTTCTGTGACACACACATCCCTTGATCCTATGGAATaGTACTATCAGCAAGAAAATCCAGAATCTAAAATATTGCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: EPSCSVTHTSLDPME*YYQQENPESKILLQ Trigger: CTGAAGCAATATTTTAGATTCTGGATTTTCTTGCTGATAGTATCATTCCATAGGATCAAGGGATGTGTGTGTCACAGAACAAGATGGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR GCA 90 bp | AATCCAGAATCTAAAATATTGCTTCAGCATGTGTCATCATCAGGATaGCCGTTAGGCACATCCTTCTTAATATTCAAGAATATGCTTACA | + |
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Preference number: 1 (lower is better) Translates to: NPESKILLQHVSSSG*PLGTSFLIFKNMLT Trigger: TGTAAGCATATTCTTGAATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTGAAGCAATATTTTAGATTCTGGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR CCA 90 bp | CAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACCTTTaGCTAATGCTGAGAATAACTGATCAGGAACCTTTTAATTTTTGC | + |
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Preference number: 1 (lower is better) Translates to: QLIKYPLNTPSVHDL*LMLRITDQEPFNFC Trigger: GCAAAAATTAAAAGGTTCCTGATCAGTTATTCTCAGCATTAGCCAAAGGTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAATGCGATCCCCGAGATCCATCTGAGTGAAACTTTCATCAGCGGCAATGGTTTTGGCTGTGATCCATaGCATTGCACACCTGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: QNAIPEIHLSETFISGNGFGCDP*HCTPGK Trigger: CTTACCAGGTGTGCAATGTCATGGATCACAGCCAAA...ACCATTGCCGCTGATGAAAGTTTCACTCAGATGGATCTCGGGGATCGCATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
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| 3UTR-3UTR GCA 90 bp | GACTACATCCCCATAATGAGACATCTCATTCCTCCATTGTCTGTGGATGTGGATCTGTCTGCAGGATGCTaGTGCATCTTCCCGTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: DYIPIMRHLIPPLSVDVDLSAGC*CIFPFL Trigger: GAGAAACGGGAAGATGCAGCAGCATCCTGCAGACAG...ATCCACATCCACAGACAATGGAGGAATGAGATGTCTCATTATGGGGATGTAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAGCGGTAGCCTCATTGATATGGGAAGGCAATGTAGTTCCTGTACAAAGAGATCGTACAGCACTGTTTaGACCATCTTGTTCTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: GSGSLIDMGRQCSSCTKRSYSTV*TILFCD Trigger: GTCACAGAACAAGATGGTTCAAACAGTGCTGTACGA...TCTCTTTGTACAGGAACTACATTGCCTTCCCATATCAATGAGGCTACCGCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTCAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTCATCTGTCTGCAGGATaGTGCTGCATCTTCCCGTTT | + |
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Preference number: 2 (lower is better) Translates to: ASACVIIRMPVRHILLNIHLSAG*CCIFPF Trigger: AAACGGGAAGATGCAGCAGCATCCTGCAGACAGATG...AATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGTCAATCTTCGTGAACTGATGCTCTCGGAATTTGACGCCATGATCATCATCATAGATCTTCTGAGCTaGGTTTCTGGGTACCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: GVNLRELMLSEFDAMIIIIDLLS*VSGYPV Trigger: AACTGGGTACCCAGAAACTCAGCTCAGAAGATCTAT...GATGATGATCATGGCGTCAAATTCCGAGAGCATCAGTTCACGAAGATTGACACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
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| 3UTR-3UTR GCA 90 bp | AATCTTCGTGAACTGATGCTCTCGGAATTTGACGCCATGATCATCATCAGACTCCCAAAACCAATGGAATaGTGTTACAGTCCCGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: NLRELMLSEFDAMIIIRLPKPME*CYSPAV Trigger: CACTGCGGGACTGTAACAGCATTCCATTGGTTTTGG...GAGTCTGATGATGATCATGGCGTCAAATTCCGAGAGCATCAGTTCACGAAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCGGTAGCCTCATTGATATGGGAAGGCAATGTAGTTCCTGTACAAAGAGAGAATATGCTTACAATTaGCCTTTCCGGAACAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: GSGSLIDMGRQCSSCTKREYAYN*PFRNSK Trigger: CTTGCTGTTCCGGAAAGGCCAATTGTAAGCATATTC...TCTCTTTGTACAGGAACTACATTGCCTTCCCATATCAATGAGGCTACCGCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR CCA 90 bp | AATCTTCGTGAACTGATGCTCTCGGAATTTGACGCCATGATCATCATCAGACTCTCTGAGCTGAGTTTCTaGGTACCCAGTTTGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: NLRELMLSEFDAMIIIRLSELSF*VPSLSS Trigger: TGAGGACAAACTGGGTACCCAGAAACTCAGCTCAGA...GAGTCTGATGATGATCATGGCGTCAAATTCCGAGAGCATCAGTTCACGAAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAATCTTCGTGAACTGATGCTCTCGGAATTTGACGCCATGATCATCATCAGAAGTCCCCAAAACCAATaGAATGCTGTTACAGTCCCG | + |
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Preference number: 2 (lower is better) Translates to: VNLRELMLSEFDAMIIIRSPQNQ*NAVTVP Trigger: CGGGACTGTAACAGCATTCCATTGGTTTTGGGGACT...TCTGATGATGATCATGGCGTCAAATTCCGAGAGCATCAGTTCACGAAGATTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAGCGGTAGCCTCATTGATATGGGAAGGCAATGTAGTTCCTGTACAAAGAGATTCAGATGCTGGATTTaGATTTTGACCTGGTATTCC | + |
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Preference number: 2 (lower is better) Translates to: GSGSLIDMGRQCSSCTKRFRCWI*ILTWYS Trigger: GGAATACCAGGTCAAAATTCAAATCCAGCATCTGAA...TCTCTTTGTACAGGAACTACATTGCCTTCCCATATCAATGAGGCTACCGCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR TCA 90 bp | GTCAATCTTCGTGAACTGATGCTCTCGGAATTTGACGCCATGATCATCATCAGAGTTCATCAACACCACTaGTCTCTTCCCACAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: VNLRELMLSEFDAMIIIRVHQHH*SLPTER Trigger: TCTTTCTGTGGGAAGAGATCAGTGGTGTTGATGAAC...TCTGATGATGATCATGGCGTCAAATTCCGAGAGCATCAGTTCACGAAGATTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTCAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTTCATTTCCATCTGTCTaGAGGATGCTGCTGCATCTT | + |
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Preference number: 2 (lower is better) Translates to: ASACVIIRMPVRHILLNISFPSV*RMLLHL Trigger: AAGATGCAGCAGCATCCTGCAGACAGATGGAAATGA...AATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTCAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTAATTACAAAGCAAAATaGACCCACCCACCCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: ASACVIIRMPVRHILLNINYKAK*THPPIC Trigger: ACAGATGGGTGGGTGGGTGCATTTTGCTTTGTAATT...AATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR TCA 90 bp | GACTACATCCCCATAATGAGACATCTCATTCCTCCATTGTCTGTGGATGTGGATATGAATGAAAGGAGTTaGTATCCTCTAAGCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: DYIPIMRHLIPPLSVDVDMNERS*YPLSTR Trigger: TCTGGTGCTTAGAGGATATCAACTCCTTTCATTCAT...ATCCACATCCACAGACAATGGAGGAATGAGATGTCTCATTATGGGGATGTAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCGGTAGCCTCATTGATATGGGAAGGCAATGTAGTTCCTGTACAAAGAGAATCTGCCTCTATGATTaGAAGCTGTATTTCTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: GSGSLIDMGRQCSSCTKRICLYD*KLYFFS Trigger: ACTAAAGAAATACAGCTTCCAATCATAGAGGCAGAT...TCTCTTTGTACAGGAACTACATTGCCTTCCCATATCAATGAGGCTACCGCTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTAAACCATCTTGTTCTGTaGCACACACATCCCTTGATC | + |
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Preference number: 2 (lower is better) Translates to: TANHIIFIHGLIDTQYSLNHLVL*HTHPLI Trigger: GATCAAGGGATGTGTGTGTCACAGAACAAGATGGTT...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR CAA 90 bp | ATGTTCAGAATATTGCCTAAGAGAATCAATGCTGTCATAGGCGAATaGGTTCAGATGCTGGATTTGAATTTTGACCTGGTATTCCAAATT | + |
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Preference number: 2 (lower is better) Translates to: MFRILPKRINAVIGE*VQMLDLNFDLVFQI Trigger: AATTTGGAATACCAGGTCAAAATTCAAATCCAGCATCTGAACCAATTCGCCTATGACAGCATTGATTCTCTTAGGCAATATTCTGAACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTATCTTCCACTTCATACTaGAGAATTTTAACTAACCCC | + |
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Preference number: 2 (lower is better) Translates to: TANHIIFIHGLIDTQYSLSSTSY*RILTNP Trigger: GGGGTTAGTTAAAATTCTTCAGTATGAAGTGGAAGA...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR TCA 90 bp | CTAAGCTCTAGTATACTAAACCTACAACAGATTACATTTGGAAATCTGCCTCTAAGCTTCTTTCATGAATaGAAGGAGTTGATATCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LSSSILNLQQITFGNLPLSFFHE*KELISS Trigger: AGAGGATATCAACTCCTTTCATTCATGAAAGAAGCT...TAGAGGCAGATTTCCAAATGTAATCTGTTGTAGGTTTAGTATACTAGAGCTTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR GCA 90 bp | CTAAGCTCTAGTATACTAAACCTACAACAGATTACATTTGGAAATCTGCCTCTATTACTGCTGACAATTTaGAATAGCATTTGGCACTTG | + |
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Preference number: 2 (lower is better) Translates to: LSSSILNLQQITFGNLPLLLLTI*NSIWHL Trigger: CAAGTGCCAAATGCTATTGCAAATTGTCAGCAGTAA...TAGAGGCAGATTTCCAAATGTAATCTGTTGTAGGTTTAGTATACTAGAGCTTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR CCA 90 bp | CTAAGCTCTAGTATACTAAACCTACAACAGATTACATTTGGAAATCTGCCTCTAAGAGACAAAAATGAATaGGATATTCAGACTGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LSSSILNLQQITFGNLPLRDKNE*DIQTVS Trigger: ACTCACAGTCTGAATATCCCATTCATTTTTGTCTCT...TAGAGGCAGATTTCCAAATGTAATCTGTTGTAGGTTTAGTATACTAGAGCTTAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR GCA 72 bp | CATCTTATTTATCATTTCCATCTGTCTGCAGGATGCTaGTGCATCTTCCCGTTTCTCACATCCCTCCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: HLIYHFHLSAGC*CIFPFLTSLQD Trigger: GTCCTGGAGGGATGTGAGAAACGGGAAGATGCAGCAGCATCCTGCAGACAGATGGAAATGATAAATAAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR GCA 72 bp | CAGCATCTTATTTATCATTTCCATCTGTCTGCAGGATaGTGCTGCATCTTCCCGTTTCTCACATCCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: QHLIYHFHLSAG*CCIFPFLTSLQ Trigger: CTGGAGGGATGTGAGAAACGGGAAGATGCAGCAGCATCCTGCAGACAGATGGAAATGATAAATAAGATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR CAA 90 bp | CTTCGTGAACTGATGCTCTCGGAATTTGACGCCATGATCATCATCAGACTCCATCCTCAGCCAATTATTTaGGCTGTGATCCATGACATT | + |
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Preference number: 3 (lower is better) Translates to: LRELMLSEFDAMIIIRLHPQPII*AVIHDI Trigger: AATGTCATGGATCACAGCCAAAATAATTGGCTGAGG...ATGGAGTCTGATGATGATCATGGCGTCAAATTCCGAGAGCATCAGTTCACGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
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| 3UTR-3UTR CAA 90 bp | AATCTTCGTGAACTGATGCTCTCGGAATTTGACGCCATGATCATCATCAGACTCAGGTTAAAGGTCTCCTaGCAAGTCCCCAAAACCAAT | + |
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Preference number: 3 (lower is better) Translates to: NLRELMLSEFDAMIIIRLRLKVS*QVPKTN Trigger: ATTGGTTTTGGGGACTTGCAAGGAGACCTTTAACCT...GAGTCTGATGATGATCATGGCGTCAAATTCCGAGAGCATCAGTTCACGAAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
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| 3UTR CCA 72 bp | ACTTTAGCTCCACATAGATCTTCTGAGCTGAGTTTCTaGGTACCCAGTTTGTCCTCAGCCAATTATTTTGGC | + |
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Preference number: 3 (lower is better) Translates to: TLAPHRSSELSF*VPSLSSANYFG Trigger: GCCAAAATAATTGGCTGAGGACAAACTGGGTACCCAGAAACTCAGCTCAGAAGATCTATGTGGAGCTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
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| 3UTR-3UTR CAA 90 bp | GGGAGCGGTAGCCTCATTGATATGGGAAGGCAATGTAGTTCCTGTACAAAGAGACCAGAATCTAAAATATaGCTTCAGCATGTGTCATCA | + |
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Preference number: 3 (lower is better) Translates to: GSGSLIDMGRQCSSCTKRPESKI*LQHVSS Trigger: TGATGACACATGCTGAAGCAATATTTTAGATTCTGG...TCTCTTTGTACAGGAACTACATTGCCTTCCCATATCAATGAGGCTACCGCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR CAA 90 bp | AATCTTCGTGAACTGATGCTCTCGGAATTTGACGCCATGATCATCATCAGACTCTTCTGGGTACCCAGTTaGTCCTCAGCCAATTATTTT | + |
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Preference number: 3 (lower is better) Translates to: NLRELMLSEFDAMIIIRLFWVPS*SSANYF Trigger: AAAATAATTGGCTGAGGACAAACTGGGTACCCAGAA...GAGTCTGATGATGATCATGGCGTCAAATTCCGAGAGCATCAGTTCACGAAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTAGTGTCTTATTAGACTaGGAGCTTTCTGCAGCATCT | + |
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Preference number: 3 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFSVLLD*ELSAAS Trigger: AGATGCTGCAGAAAGCTCCAAGTCTAATAAGACACT...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR CAA 90 bp | CATATGTACAGGGAAGGGGTTATGCAAAGGAAATCCATAAACGGTGAGATAGAAGCCTTCAGGTCTGTTTaGCTAGTTTACTTGGTTTAT | + |
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Preference number: 3 (lower is better) Translates to: HMYREGVMQRKSINGEIEAFRSV*LVYLVY Trigger: ATAAACCAAGTAAACTAGCAAAACAGACCTGAAGGC...TTCTATCTCACCGTTTATGGATTTCCTTTGCATAACCCCTTCCCTGTACATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR CAA 90 bp | CATATGTACAGGGAAGGGGTTATGCAAAGGAAATCCATAAACGGTGAGATAGAACTCACAATAGGTACATaGAAGTGGAAGACTCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: HMYREGVMQRKSINGEIELTIGT*KWKTQR Trigger: TCTTTGAGTCTTCCACTTCAATGTACCTATTGTGAG...TTCTATCTCACCGTTTATGGATTTCCTTTGCATAACCCCTTCCCTGTACATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR TCA 72 bp | TATTTCGTACAGCACTGTTTGAACCATCTTGTTCTGTaGCACACACATCCCTTGATCCTATGGAATGATACT | + |
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Preference number: 3 (lower is better) Translates to: YFVQHCLNHLVL*HTHPLILWNDT Trigger: AGTATCATTCCATAGGATCAAGGGATGTGTGTGTCACAGAACAAGATGGTTCAAACAGTGCTGTACGAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR CCA 72 bp | AAATATCCTCTCAACACACCTTCAGTGCATGACCTTTaGCTAATGCTGAGAATAACTGATCAGGAACCTTTT | + |
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Preference number: 3 (lower is better) Translates to: KYPLNTPSVHDL*LMLRITDQEPF Trigger: AAAAGGTTCCTGATCAGTTATTCTCAGCATTAGCCAAAGGTCATGCACTGAAGGTGTGTTGAGAGGATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
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| 3UTR-3UTR CAA 90 bp | CATATGTACAGGGAAGGGGTTATGCAAAGGAAATCCATAAACGGTGAGATAGAAGGAAAGCATTTCATTTaGTTGGTACATGTAAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: HMYREGVMQRKSINGEIEGKHFI*LVHVSG Trigger: TCCACTTACATGTACCAACAAAATGAAATGCTTTCC...TTCTATCTCACCGTTTATGGATTTCCTTTGCATAACCCCTTCCCTGTACATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR GCA 72 bp | CTTATAACTGAGTGTCTTATTAGACTTGGAGCTTTCTaGAGCATCTTATTTATCATTTCCATCTGTCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: LITECLIRLGAF*SILFIISICLQ Trigger: CTGCAGACAGATGGAAATGATAAATAAGATGCTGCAGAAAGCTCCAAGTCTAATAAGACACTCAGTTATAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR GCA 72 bp | TATGATTGGAAGCTGTATTTCTTTAGTGTCCCTTTTTaGATAGAGACGTATTTCGTACAGCACTGTTTGAAC | + |
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Preference number: 3 (lower is better) Translates to: YDWKLYFFSVPF*IETYFVQHCLN Trigger: GTTCAAACAGTGCTGTACGAAATACGTCTCTATGCAAAAAGGGACACTAAAGAAATACAGCTTCCAATCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR-3UTR CAA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTAAATAGCATTTGGCACTaGGCTGTAACAAAACCCAAA | + |
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Preference number: 3 (lower is better) Translates to: TANHIIFIHGLIDTQYSLNSIWH*AVTKPK Trigger: TTTGGGTTTTGTTACAGCCAAGTGCCAAATGCTATT...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR TCA 72 bp | TGTTCTGTGACACACACATCCCTTGATCCTATGGAATaGTACTATCAGCAAGAAAATCCAGAATCTAAAATA | + |
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Preference number: 3 (lower is better) Translates to: CSVTHTSLDPME*YYQQENPESKI Trigger: TATTTTAGATTCTGGATTTTCTTGCTGATAGTATCATTCCATAGGATCAAGGGATGTGTGTGTCACAGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR TCA 72 bp | CATGCTCTTATAAGTTCAGTACAAATTCTAGCAGCATaGTACGGAGTATTGTCAACATTTGGGAAACAATTT | + |
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Preference number: 3 (lower is better) Translates to: HALISSVQILAA*YGVLSTFGKQF Trigger: AAATTGTTTCCCAAATGTTGACAATACTCCGTATCATGCTGCTAGAATTTGTACTGAACTTATAAGAGCATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR CCA 90 bp | AGCATCTTATTTATCATTTCCATCTGTCTGCAGGATGCTGCTGCATCTTCCCGTGAAGGAAGCGGACGTTaGGGCTGCACGGCTCACACT | + |
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Preference number: 4 (lower is better) Translates to: SILFIISICLQDAAASSREGSGR*GCTAHT Trigger: AGTGTGAGCCGTGCAGCCCCAACGTCCGCTTCCTTC...ACGGGAAGATGCAGCAGCATCCTGCAGACAGATGGAAATGATAAATAAGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR TCA 90 bp | GACTACATCCCCATAATGAGACATCTCATTCCTCCATTGTCTGTGGATGTGGATGTCCAGAAGAAGGTTTaGTGGCCTTGCAGCCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DYIPIMRHLIPPLSVDVDVQKKV*WPCSRA Trigger: AGCGCGGCTGCAAGGCCATCAAACCTTCTTCTGGAC...ATCCACATCCACAGACAATGGAGGAATGAGATGTCTCATTATGGGGATGTAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR GCA 90 bp | CTCAACACACCTTCAGTGCATGACCTTTGGCTAATGCTGAGAATAACTGATCAGTTGGTGAGTCCAAGCTaGCGAGGAAGGAAGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: LNTPSVHDLWLMLRITDQLVSPS*RGRKRT Trigger: CGTCCGCTTCCTTCCTCGGCAGCTTGGACTCACCAA...CTGATCAGTTATTCTCAGCATTAGCCAAAGGTCATGCACTGAAGGTGTGTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
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| CDS-3UTR CCA 90 bp | CAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTCAAGGCAATCCATGGGAGGTaGCAGGCGATAGCCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: QHVSSSGCPLGTSFLIFKAIHGR*QAIALI Trigger: GATGAGGGCTATCGCCTGCCACCTCCCATGGATTGC...CTTGAATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR GCA 90 bp | GCTTCAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTGCCATTCCCCTTCTGTaGTGCAGTACATCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASACVIIRMPVRHILLNIAIPLL*CSTSWE Trigger: CTCCCAGGATGTACTGCAGCACAGAAGGGGAATGGC...AATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR GCA 90 bp | GGGAGCGGTAGCCTCATTGATATGGGAAGGCAATGTAGTTCCTGTACAAAGAGAACCCAGCATTGCAAGTaGATTTGCCAATGGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: GSGSLIDMGRQCSSCTKRTQHCK*ICQWGP Trigger: TGGTCCCCATTGGCAAATGCACTTGCAATGCTGGGT...TCTCTTTGTACAGGAACTACATTGCCTTCCCATATCAATGAGGCTACCGCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR CCA 90 bp | AGCATCTTATTTATCATTTCCATCTGTCTGCAGGATGCTGCTGCATCTTCCCGTACCTCCACCAAAGACTaGGAGTCCATGGGCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SILFIISICLQDAAASSRTSTKD*ESMGTV Trigger: CACAGTGCCCATGGACTCCCAGTCTTTGGTGGAGGT...ACGGGAAGATGCAGCAGCATCCTGCAGACAGATGGAAATGATAAATAAGATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR TCA 90 bp | GGGAGCGGTAGCCTCATTGATATGGGAAGGCAATGTAGTTCCTGTACAAAGAGAGATGCTCTCGGAATTTaGCGCCATGATCATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSGSLIDMGRQCSSCTKRDALGI*RHDHHQ Trigger: CTGATGATGATCATGGCGTCAAATTCCGAGAGCATC...TCTCTTTGTACAGGAACTACATTGCCTTCCCATATCAATGAGGCTACCGCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR GCA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTCTGCACGGCTCACACTaGCTGACATTCCACCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFLHGSH*LTFHPH Trigger: GTGTGGGTGGAATGTCAGGCAGTGTGAGCCGTGCAG...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR GCA 90 bp | CAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTCAAGAGTTGTGATGCTGACTaGGGCATACTGTCTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QHVSSSGCPLGTSFLIFKSCDAD*GILSRW Trigger: CCACCGAGACAGTATGCCGCAGTCAGCATCACAACT...CTTGAATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR GCA 90 bp | GGGAGCGGTAGCCTCATTGATATGGGAAGGCAATGTAGTTCCTGTACAAAGAGAAGAATGCTGACGATCTaGTCGAACTTGGGTCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSGSLIDMGRQCSSCTKRRMLTI*SNLGLL Trigger: CAACAGACCCAAGTTCGAGCAGATCGTCAGCATTCT...TCTCTTTGTACAGGAACTACATTGCCTTCCCATATCAATGAGGCTACCGCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR TCA 90 bp | AGCATCTTATTTATCATTTCCATCTGTCTGCAGGATGCTGCTGCATCTTCCCGTTCCCCGAGATCCATCTaGGTGAAACTTTCATCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SILFIISICLQDAAASSRSPRSI*VKLSSA Trigger: CGCTGATGAAAGTTTCACTCAGATGGATCTCGGGGA...ACGGGAAGATGCAGCAGCATCCTGCAGACAGATGGAAATGATAAATAAGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR TCA 90 bp | AATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACCTTTGGTCACCGTGGTGTTGGTaGGTCCAAGCTGCCGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NVQLIKYPLNTPSVHDLWSPWCW*VQAAEE Trigger: TTCCTCGGCAGCTTGGACTCACCAACACCACGGTGA...CCAAAGGTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR TCA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTTGGCCATTCCCAAAGTaGAGGCGCTTCTCCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFWPFPK*RRFSSA Trigger: TGCAGAGGAGAAGCGCCTTCACTTTGGGAATGGCCA...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTCAGTCCAACATCAACTaGTACAAGGCAGCTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASACVIIRMPVRHILLNIQSNIN*YKAAGQ Trigger: TTGCCCAGCTGCCTTGTATCAGTTGATGTTGGACTG...AATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR GCA 90 bp | AATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACCTTTGGCTGCACGGCTCACACTaGCTGACATTCCACCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: NVQLIKYPLNTPSVHDLWLHGSH*LTFHPH Trigger: GTGTGGGTGGAATGTCAGGCAGTGTGAGCCGTGCAG...CCAAAGGTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
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| CDS-3UTR CCA 90 bp | CTCAACACACCTTCAGTGCATGACCTTTGGCTAATGCTGAGAATAACTGATCAGAAGACTGGGAGTCCATaGGCACTGTGTCTGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LNTPSVHDLWLMLRITDQKTGSP*ALCLET Trigger: TGTTTCCAGACACAGTGCCCATGGACTCCCAGTCTT...CTGATCAGTTATTCTCAGCATTAGCCAAAGGTCATGCACTGAAGGTGTGTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CCA 90 bp | CAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTCAAGAAGTGCATTTGCCAATaGGGACCAGCCATTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QHVSSSGCPLGTSFLIFKKCICQ*GPAIPL Trigger: AAGGGGAATGGCTGGTCCCCATTGGCAAATGCACTT...CTTGAATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR CCA 90 bp | GACCTTTGGCTAATGCTGAGAATAACTGATCAGGAACCTTTTAATTTTTGCAACGAAGGAAGCGGACGTTaGGGCTGCACGGCTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: DLWLMLRITDQEPFNFCNEGSGR*GCTAHT Trigger: AGTGTGAGCCGTGCAGCCCCAACGTCCGCTTCCTTC...GTTGCAAAAATTAAAAGGTTCCTGATCAGTTATTCTCAGCATTAGCCAAAGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGCGGTAGCCTCATTGATATGGGAAGGCAATGTAGTTCCTGTACAAAGAGATGTCGATGGATATATTaGTGGCATCCAACTCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GSGSLIDMGRQCSSCTKRCRWIY*WHPTPS Trigger: CGAAGGAGTTGGATGCCACCAATATATCCATCGACA...TCTCTTTGTACAGGAACTACATTGCCTTCCCATATCAATGAGGCTACCGCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTCAATCTTCGTGAACTGATGCTCTCGGAATTTGACGCCATGATCATCATCCAGCCCAGCTCTCCTTaGATTGTTTTCGAATCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVNLRELMLSEFDAMIIIQPSSP*IVFESS Trigger: ACTAGATTCGAAAACAATTCAAGGAGAGCTGGGCTG...GATGATGATCATGGCGTCAAATTCCGAGAGCATCAGTTCACGAAGATTGACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
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| CDS-3UTR TCA 90 bp | CTCAACACACCTTCAGTGCATGACCTTTGGCTAATGCTGAGAATAACTGATCAGGATGCTCTCGGAATTTaGCGCCATGATCATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNTPSVHDLWLMLRITDQDALGI*RHDHHQ Trigger: CTGATGATGATCATGGCGTCAAATTCCGAGAGCATC...CTGATCAGTTATTCTCAGCATTAGCCAAAGGTCATGCACTGAAGGTGTGTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR TCA 90 bp | CTCAACACACCTTCAGTGCATGACCTTTGGCTAATGCTGAGAATAACTGATCAGCGAGATCCATCTGAGTaGAACTTTCATCAGCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LNTPSVHDLWLMLRITDQRDPSE*NFHQRQ Trigger: TTGCCGCTGATGAAAGTTTCACTCAGATGGATCTCG...CTGATCAGTTATTCTCAGCATTAGCCAAAGGTCATGCACTGAAGGTGTGTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
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| CDS-3UTR TCA 90 bp | GCTTCAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTGCAATCATCACCACATaGCTGTTTTCACCGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ASACVIIRMPVRHILLNIAIITT*LFSPEM Trigger: CATCTCCGGTGAAAACAGTCATGTGGTGATGATTGC...AATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR TCA 90 bp | GCTTCAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTGAGGTATTTCATACCTaGTGCTATCCCACGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASACVIIRMPVRHILLNIEVFHT*CYPTEH Trigger: ATGCTCCGTGGGATAGCATCAGGTATGAAATACCTC...AATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR TCA 90 bp | GGGAGCGGTAGCCTCATTGATATGGGAAGGCAATGTAGTTCCTGTACAAAGAGAACACTAAGTTACTGTTaGTCAAGATGTTGCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSGSLIDMGRQCSSCTKRTLSYC*SRCCEQ Trigger: CTGCTCGCAACATCTTGATCAACAGTAACTTAGTGT...TCTCTTTGTACAGGAACTACATTGCCTTCCCATATCAATGAGGCTACCGCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR GCA 90 bp | GCTTCAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTCCAAAACCAATGGAATaGTGTTACAGTCCCGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASACVIIRMPVRHILLNIPKPME*CYSPAV Trigger: CACTGCGGGACTGTAACAGCATTCCATTGGTTTTGG...AATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR GCA 90 bp | AGCATCTTATTTATCATTTCCATCTGTCTGCAGGATGCTGCTGCATCTTCCCGTCATTGCAAGTGCATTTaGCAATGGGGACCAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SILFIISICLQDAAASSRHCKCI*QWGPAI Trigger: AATGGCTGGTCCCCATTGGCAAATGCACTTGCAATG...ACGGGAAGATGCAGCAGCATCCTGCAGACAGATGGAAATGATAAATAAGATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR GCA 90 bp | CTTCGTGAACTGATGCTCTCGGAATTTGACGCCATGATCATCATCAGACTCCATCAACAAGAAACAAAGTaGACTGAACCCCATGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LRELMLSEFDAMIIIRLHQQETK*TEPHGM Trigger: CATCCCATGGGGTTCAGTGCACTTTGTTTCTTGTTG...ATGGAGTCTGATGATGATCATGGCGTCAAATTCCGAGAGCATCAGTTCACGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
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| CDS-3UTR CCA 90 bp | GCTTCAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTTCTGAGCTGAGTTTCTaGGTACCCAGTTTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASACVIIRMPVRHILLNISELSF*VPSLSS Trigger: TGAGGACAAACTGGGTACCCAGAAACTCAGCTCAGA...AATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR CCA 90 bp | GACTACATCCCCATAATGAGACATCTCATTCCTCCATTGTCTGTGGATGTGGATAGCCTTGTAGAAGCCTaGTCGACAAGCTTGGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: DYIPIMRHLIPPLSVDVDSLVEA*STSLAY Trigger: ATATGCCAAGCTTGTCGACCAGGCTTCTACAAGGCT...ATCCACATCCACAGACAATGGAGGAATGAGATGTCTCATTATGGGGATGTAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR CCA 90 bp | GACTACATCCCCATAATGAGACATCTCATTCCTCCATTGTCTGTGGATGTGGATTGGATGACTGTGAACTaGGCATCGTGCTTACGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DYIPIMRHLIPPLSVDVDWMTVN*ASCLRK Trigger: CTTACGTAAGCACGATGCCCAGTTCACAGTCATCCA...ATCCACATCCACAGACAATGGAGGAATGAGATGTCTCATTATGGGGATGTAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR CCA 90 bp | GACTACATCCCCATAATGAGACATCTCATTCCTCCATTGTCTGTGGATGTGGATGTATCTTTCCTCCCCTaGTTGTGTAAGCAGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DYIPIMRHLIPPLSVDVDVSFLP*LCKQLL Trigger: CAGAAGCTGCTTACACAACCAGGGGAGGAAAGATAC...ATCCACATCCACAGACAATGGAGGAATGAGATGTCTCATTATGGGGATGTAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR CCA 90 bp | CTAAGCTCTAGTATACTAAACCTACAACAGATTACATTTGGAAATCTGCCTCTACAGCTGGGCAATCCATaGGAGGTGGCAGGCGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSSILNLQQITFGNLPLQLGNP*EVAGDS Trigger: GCTATCGCCTGCCACCTCCCATGGATTGCCCAGCTG...TAGAGGCAGATTTCCAAATGTAATCTGTTGTAGGTTTAGTATACTAGAGCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR TCA 90 bp | GCTTCAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTCAGCCCAGCTCTCCTTaGATTGTTTTCGAATCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASACVIIRMPVRHILLNIQPSSP*IVFESS Trigger: ACTAGATTCGAAAACAATTCAAGGAGAGCTGGGCTG...AATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR TCA 90 bp | CTCAACACACCTTCAGTGCATGACCTTTGGCTAATGCTGAGAATAACTGATCAGCAGCCCAGCTCTCCTTaGATTGTTTTCGAATCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNTPSVHDLWLMLRITDQQPSSP*IVFESS Trigger: ACTAGATTCGAAAACAATTCAAGGAGAGCTGGGCTG...CTGATCAGTTATTCTCAGCATTAGCCAAAGGTCATGCACTGAAGGTGTGTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
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| CDS-3UTR TCA 90 bp | GACTACATCCCCATAATGAGACATCTCATTCCTCCATTGTCTGTGGATGTGGATTGGTGTCAATCTTCGTaGACTGATGCTCTCGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: DYIPIMRHLIPPLSVDVDWCQSS*TDALGI Trigger: AATTCCGAGAGCATCAGTTCACGAAGATTGACACCA...ATCCACATCCACAGACAATGGAGGAATGAGATGTCTCATTATGGGGATGTAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR TCA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTATCACCGTGGTGTTGGTaGGTCCAAGCTGCCGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TANHIIFIHGLIDTQYSLSPWCW*VQAAEE Trigger: TTCCTCGGCAGCTTGGACTCACCAACACCACGGTGA...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR TCA 90 bp | TACAAGAATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACTGGCGAGCTCAGCTCTaGCACCCCATTAACAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: YKNVQLIKYPLNTPSVHDWRAQL*HPINSI Trigger: GATGCTGTTAATGGGGTGTCAGAGCTGAGCTCGCCA...GTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATTCTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR TCA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTGTGGCCCAACCACAGTaGCACCAACCTTTTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFVAQPQ*HQPFSC Trigger: ACATGAAAAAGGTTGGTGTCACTGTGGTTGGGCCAC...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR GCA 90 bp | GACCTTTGGCTAATGCTGAGAATAACTGATCAGGAACCTTTTAATTTTTGCAACGCCATTCCCCTTCTGTaGTGCAGTACATCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLWLMLRITDQEPFNFCNAIPLL*CSTSWE Trigger: CTCCCAGGATGTACTGCAGCACAGAAGGGGAATGGC...GTTGCAAAAATTAAAAGGTTCCTGATCAGTTATTCTCAGCATTAGCCAAAGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR GCA 90 bp | CTCAACACACCTTCAGTGCATGACCTTTGGCTAATGCTGAGAATAACTGATCAGCTTCATACCCAGCATTaGAAGTGCATTTGCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LNTPSVHDLWLMLRITDQLHTQH*KCICQW Trigger: CCATTGGCAAATGCACTTGCAATGCTGGGTATGAAG...CTGATCAGTTATTCTCAGCATTAGCCAAAGGTCATGCACTGAAGGTGTGTTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTATTGGTGAGTCCAAGCTaGCGAGGAAGGAAGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: TANHIIFIHGLIDTQYSLLVSPS*RGRKRT Trigger: CGTCCGCTTCCTTCCTCGGCAGCTTGGACTCACCAA...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR GCA 90 bp | AGCATCTTATTTATCATTTCCATCTGTCTGCAGGATGCTGCTGCATCTTCCCGTTTGTTCCTGTCTTTCTaGCAGCAGTCCAACATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SILFIISICLQDAAASSRLFLSF*QQSNIN Trigger: GTTGATGTTGGACTGCTGGCAGAAAGACAGGAACAA...ACGGGAAGATGCAGCAGCATCCTGCAGACAGATGGAAATGATAAATAAGATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CCA 90 bp | CTCAACACACCTTCAGTGCATGACCTTTGGCTAATGCTGAGAATAACTGATCAGCATGGGCACTGTGTCTaGAAACATAGCCAGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNTPSVHDLWLMLRITDQHGHCV*KHSQIL Trigger: AAGAATCTGGCTATGTTTCCAGACACAGTGCCCATG...CTGATCAGTTATTCTCAGCATTAGCCAAAGGTCATGCACTGAAGGTGTGTTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CCA 90 bp | GACCTTTGGCTAATGCTGAGAATAACTGATCAGGAACCTTTTAATTTTTGCAACACCTCCACCAAAGACTaGGAGTCCATGGGCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DLWLMLRITDQEPFNFCNTSTKD*ESMGTV Trigger: CACAGTGCCCATGGACTCCCAGTCTTTGGTGGAGGT...GTTGCAAAAATTAAAAGGTTCCTGATCAGTTATTCTCAGCATTAGCCAAAGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CCA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTCAAATTTGCGGCTGTTaGTTCCATATCCCGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFQICGC*FHIPLL Trigger: CAGCAGCGGGATATGGAACCAACAGCCGCAAATTTG...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CCA 90 bp | CATATGTACAGGGAAGGGGTTATGCAAAGGAAATCCATAAACGGTGAGATAGAACATCTGTGGAGATCTTaGCAATGGTGTCACAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HMYREGVMQRKSINGEIEHLWRS*QWCHRS Trigger: GCTCCTGTGACACCATTGCCAAGATCTCCACAGATG...TTCTATCTCACCGTTTATGGATTTCCTTTGCATAACCCCTTCCCTGTACATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR TCA 90 bp | CATATGTACAGGGAAGGGGTTATGCAAAGGAAATCCATAAACGGTGAGATAGAATTTGGCTGTGATCCATaGCATTGCACACCTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HMYREGVMQRKSINGEIEFGCDP*HCTPGK Trigger: CTTACCAGGTGTGCAATGTCATGGATCACAGCCAAA...TTCTATCTCACCGTTTATGGATTTCCTTTGCATAACCCCTTCCCTGTACATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTATGGCGAGCTCAGCTCTaGCACCCCATTAACAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TANHIIFIHGLIDTQYSLWRAQL*HPINSI Trigger: GATGCTGTTAATGGGGTGTCAGAGCTGAGCTCGCCA...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR TCA 90 bp | AATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACCTTTGGGGTGATGGAGCAGCCTaGTTAGTTGTGATGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: NVQLIKYPLNTPSVHDLWGDGAA*LVVMLT Trigger: AGTCAGCATCACAACTAATCAGGCTGCTCCATCACC...CCAAAGGTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR TCA 90 bp | AGCATCTTATTTATCATTTCCATCTGTCTGCAGGATGCTGCTGCATCTTCCCGTCTCTGCACTGTGTTTTaGCTTGTGATAGCCACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SILFIISICLQDAAASSRLCTVF*LVIATK Trigger: TTTTGTGGCTATCACAAGTCAAAACACAGTGCAGAG...ACGGGAAGATGCAGCAGCATCCTGCAGACAGATGGAAATGATAAATAAGATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR GCA 90 bp | GACCTTTGGCTAATGCTGAGAATAACTGATCAGGAACCTTTTAATTTTTGCAACAGTTGTGATGCTGACTaGGGCATACTGTCTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLWLMLRITDQEPFNFCNSCDAD*GILSRW Trigger: CCACCGAGACAGTATGCCGCAGTCAGCATCACAACT...GTTGCAAAAATTAAAAGGTTCCTGATCAGTTATTCTCAGCATTAGCCAAAGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR GCA 90 bp | CTCAACACACCTTCAGTGCATGACCTTTGGCTAATGCTGAGAATAACTGATCAGGGATGTTCCGGTTCTTaGCAAGATAAAGAGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: LNTPSVHDLWLMLRITDQGCSGS*QDKEIL Trigger: CAGTATCTCTTTATCTTGGCAAGAACCGGAACATCC...CTGATCAGTTATTCTCAGCATTAGCCAAAGGTCATGCACTGAAGGTGTGTTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CCA 90 bp | CATATGTACAGGGAAGGGGTTATGCAAAGGAAATCCATAAACGGTGAGATAGAAAGTCCCCAAAACCAATaGAATGCTGTTACAGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HMYREGVMQRKSINGEIESPQNQ*NAVTVP Trigger: CGGGACTGTAACAGCATTCCATTGGTTTTGGGGACT...TTCTATCTCACCGTTTATGGATTTCCTTTGCATAACCCCTTCCCTGTACATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CCA 90 bp | TACAAGAATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACGGTACAAGCCATGGATaGAGGGTCTTTTTCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: YKNVQLIKYPLNTPSVHDGTSHG*RVFFCP Trigger: CGGGCAGAAAAAGACCCTCCATCCATGGCTTGTACC...GTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATTCTTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGCTCTAGTATACTAAACCTACAACAGATTACATTTGGAAATCTGCCTCTACTGATACAAGGCAGCTaGGCAATCCATGGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSSILNLQQITFGNLPLLIQGS*AIHGRW Trigger: CCACCTCCCATGGATTGCCCAGCTGCCTTGTATCAG...TAGAGGCAGATTTCCAAATGTAATCTGTTGTAGGTTTAGTATACTAGAGCTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CCA 90 bp | CATATGTACAGGGAAGGGGTTATGCAAAGGAAATCCATAAACGGTGAGATAGAACGATCTGCTCGAACTTaGGTCTGTTGTTCCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HMYREGVMQRKSINGEIERSART*VCCSCL Trigger: AAGACAGGAACAACAGACCCAAGTTCGAGCAGATCG...TTCTATCTCACCGTTTATGGATTTCCTTTGCATAACCCCTTCCCTGTACATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR TCA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTATAGATCTTCTGAGCTaGGTTTCTGGGTACCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFIDLLS*VSGYPV Trigger: AACTGGGTACCCAGAAACTCAGCTCAGAAGATCTAT...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR TCA 90 bp | TACAAGAATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACTCCCCGAGATCCATCTaGGTGAAACTTTCATCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: YKNVQLIKYPLNTPSVHDSPRSI*VKLSSA Trigger: CGCTGATGAAAGTTTCACTCAGATGGATCTCGGGGA...GTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATTCTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR TCA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTTCTCCATGTATTCCGTaGCAATCATCACTGGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFSPCIP*QSSLAY Trigger: GTAAGCCAGTGATGATTGTCACGGAATACATGGAGA...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR GCA 90 bp | AATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACCTTTGGCCAAAACCAATGGAATaGTGTTACAGTCCCGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NVQLIKYPLNTPSVHDLWPKPME*CYSPAV Trigger: CACTGCGGGACTGTAACAGCATTCCATTGGTTTTGG...CCAAAGGTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR GCA 90 bp | GACCTTTGGCTAATGCTGAGAATAACTGATCAGGAACCTTTTAATTTTTGCAACACCCAGCATTGCAAGTaGATTTGCCAATGGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: DLWLMLRITDQEPFNFCNTQHCK*ICQWGP Trigger: TGGTCCCCATTGGCAAATGCACTTGCAATGCTGGGT...GTTGCAAAAATTAAAAGGTTCCTGATCAGTTATTCTCAGCATTAGCCAAAGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR GCA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTCTTCATACCCAGCATTaGAAGTGCATTTGCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFLHTQH*KCICQW Trigger: CCATTGGCAAATGCACTTGCAATGCTGGGTATGAAG...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGCGGTAGCCTCATTGATATGGGAAGGCAATGTAGTTCCTGTACAAAGAGAAATTATTCTCACACCTaGAGTTCATTGAACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSGSLIDMGRQCSSCTKRNYSHT*SSLNHL Trigger: AAGATGGTTCAATGAACTGCAGGTGTGAGAATAATT...TCTCTTTGTACAGGAACTACATTGCCTTCCCATATCAATGAGGCTACCGCTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR GCA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTAATGATGGCCACAGCTaGGGAAATAGCAATCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFNDGHS*GNSNHH Trigger: GTGATGATTGCTATTTCCGCAGCTGTGGCCATCATT...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR GCA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTGATTTCCTTACAGTGTaGTGTCCTCATGCCGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFDFLTV*CPHAVK Trigger: CTTAACGGCATGAGGACAGCACACTGTAAGGAAATC...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CCA 90 bp | AATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACCTTTGGTCTGAGCTGAGTTTCTaGGTACCCAGTTTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NVQLIKYPLNTPSVHDLWSELSF*VPSLSS Trigger: TGAGGACAAACTGGGTACCCAGAAACTCAGCTCAGA...CCAAAGGTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CCA 90 bp | AATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACCTTTGGAGTCCCCAAAACCAATaGAATGCTGTTACAGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NVQLIKYPLNTPSVHDLWSPQNQ*NAVTVP Trigger: CGGGACTGTAACAGCATTCCATTGGTTTTGGGGACT...CCAAAGGTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CCA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTCATGGGCACTGTGTCTaGAAACATAGCCAGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFHGHCV*KHSQIL Trigger: AAGAATCTGGCTATGTTTCCAGACACAGTGCCCATG...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CCA 90 bp | TACAAGAATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACAAGTGCATTTGCCAATaGGGACCAGCCATTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YKNVQLIKYPLNTPSVHDKCICQ*GPAIPL Trigger: AAGGGGAATGGCTGGTCCCCATTGGCAAATGCACTT...GTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATTCTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CCA 90 bp | AATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACCTTTGGAGCCTTGTAGAAGCCTaGTCGACAAGCTTGGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: NVQLIKYPLNTPSVHDLWSLVEA*STSLAY Trigger: ATATGCCAAGCTTGTCGACCAGGCTTCTACAAGGCT...CCAAAGGTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTAGGTACAAGCCATGGATaGAGGGTCTTTTTCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TANHIIFIHGLIDTQYSLGTSHG*RVFFCP Trigger: CGGGCAGAAAAAGACCCTCCATCCATGGCTTGTACC...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CCA 90 bp | GACCTTTGGCTAATGCTGAGAATAACTGATCAGGAACCTTTTAATTTTTGCAACCAAATTTGCGGCTGTTaGTTCCATATCCCGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DLWLMLRITDQEPFNFCNQICGC*FHIPLL Trigger: CAGCAGCGGGATATGGAACCAACAGCCGCAAATTTG...GTTGCAAAAATTAAAAGGTTCCTGATCAGTTATTCTCAGCATTAGCCAAAGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CCA 90 bp | AGCATCTTATTTATCATTTCCATCTGTCTGCAGGATGCTGCTGCATCTTCCCGTGTCTTCATATGTATGTaGATCAACATAGGTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SILFIISICLQDAAASSRVFICM*INIGPE Trigger: CTCAGGACCTATGTTGATCCACATACATATGAAGAC...ACGGGAAGATGCAGCAGCATCCTGCAGACAGATGGAAATGATAAATAAGATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR TCA 90 bp | GACCTTTGGCTAATGCTGAGAATAACTGATCAGGAACCTTTTAATTTTTGCAACTTTGGCTGTGATCCATaGCATTGCACACCTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DLWLMLRITDQEPFNFCNFGCDP*HCTPGK Trigger: CTTACCAGGTGTGCAATGTCATGGATCACAGCCAAA...GTTGCAAAAATTAAAAGGTTCCTGATCAGTTATTCTCAGCATTAGCCAAAGGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR TCA 90 bp | CTAAGCTCTAGTATACTAAACCTACAACAGATTACATTTGGAAATCTGCCTCTAGGTGATGGAGCAGCCTaGTTAGTTGTGATGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LSSSILNLQQITFGNLPLGDGAA*LVVMLT Trigger: AGTCAGCATCACAACTAATCAGGCTGCTCCATCACC...TAGAGGCAGATTTCCAAATGTAATCTGTTGTAGGTTTAGTATACTAGAGCTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR TCA 90 bp | CATATGTACAGGGAAGGGGTTATGCAAAGGAAATCCATAAACGGTGAGATAGAAGATCAACATAGGTCCTaGGACCTGGAAGTTTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HMYREGVMQRKSINGEIEDQHRS*DLEVLS Trigger: ACTTAAAACTTCCAGGTCTCAGGACCTATGTTGATC...TTCTATCTCACCGTTTATGGATTTCCTTTGCATAACCCCTTCCCTGTACATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR TCA 90 bp | CATATGTACAGGGAAGGGGTTATGCAAAGGAAATCCATAAACGGTGAGATAGAAGCCTTAATTACATCCTaGTTGGACATCTCCCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HMYREGVMQRKSINGEIEALITS*LDISQY Trigger: ATACTGGGAGATGTCCAATCAGGATGTAATTAAGGC...TTCTATCTCACCGTTTATGGATTTCCTTTGCATAACCCCTTCCCTGTACATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTAGTTTGTCCAGAATGCTaGCGATCTGCTCGAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TANHIIFIHGLIDTQYSLVCPEC*RSARTW Trigger: CCAAGTTCGAGCAGATCGTCAGCATTCTGGACAAAC...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR GCA 90 bp | GACCTTTGGCTAATGCTGAGAATAACTGATCAGGAACCTTTTAATTTTTGCAACGATAACATTTCTTGGTaGGGATGGAGGTCGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: DLWLMLRITDQEPFNFCNDNISW*GWRSGT Trigger: TGTACCCGACCTCCATCCGCACCAAGAAATGTTATC...GTTGCAAAAATTAAAAGGTTCCTGATCAGTTATTCTCAGCATTAGCCAAAGGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR GCA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTGGATGTTCCGGTTCTTaGCAAGATAAAGAGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFGCSGS*QDKEIL Trigger: CAGTATCTCTTTATCTTGGCAAGAACCGGAACATCC...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGCTCTAGTATACTAAACCTACAACAGATTACATTTGGAAATCTGCCTCTAAAGACTGGGAGTCCATaGGCACTGTGTCTGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LSSSILNLQQITFGNLPLKTGSP*ALCLET Trigger: TGTTTCCAGACACAGTGCCCATGGACTCCCAGTCTT...TAGAGGCAGATTTCCAAATGTAATCTGTTGTAGGTTTAGTATACTAGAGCTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTATATCGACATTGCTTTaGTCCAGAAGAAGGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASACVIIRMPVRHILLNIISTLL*SRRRFD Trigger: ATCAAACCTTCTTCTGGACCAAAGCAATGTCGATAT...AATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTGAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR TCA 90 bp | TACAAGAATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACATAGATCTTCTGAGCTaGGTTTCTGGGTACCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YKNVQLIKYPLNTPSVHDIDLLS*VSGYPV Trigger: AACTGGGTACCCAGAAACTCAGCTCAGAAGATCTAT...GTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATTCTTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR TCA 90 bp | GACCTTTGGCTAATGCTGAGAATAACTGATCAGGAACCTTTTAATTTTTGCAACTGGTGTCAATCTTCGTaGACTGATGCTCTCGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: DLWLMLRITDQEPFNFCNWCQSS*TDALGI Trigger: AATTCCGAGAGCATCAGTTCACGAAGATTGACACCA...GTTGCAAAAATTAAAAGGTTCCTGATCAGTTATTCTCAGCATTAGCCAAAGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTACGAGATCCATCTGAGTaGAACTTTCATCAGCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TANHIIFIHGLIDTQYSLRDPSE*NFHQRQ Trigger: TTGCCGCTGATGAAAGTTTCACTCAGATGGATCTCG...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGCTCTAGTATACTAAACCTACAACAGATTACATTTGGAAATCTGCCTCTAGATAACATTTCTTGGTaGGGATGGAGGTCGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LSSSILNLQQITFGNLPLDNISW*GWRSGT Trigger: TGTACCCGACCTCCATCCGCACCAAGAAATGTTATC...TAGAGGCAGATTTCCAAATGTAATCTGTTGTAGGTTTAGTATACTAGAGCTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR GCA 90 bp | AGCATCTTATTTATCATTTCCATCTGTCTGCAGGATGCTGCTGCATCTTCCCGTTTTCAAATTCAAATTTaGGGCTGTTGGTTCCATATC | + |
|
Preference number: 4 (lower is better) Translates to: SILFIISICLQDAAASSRFQIQI*GCWFHI Trigger: GATATGGAACCAACAGCCGCAAATTTGAATTTGAAA...ACGGGAAGATGCAGCAGCATCCTGCAGACAGATGGAAATGATAAATAAGATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CCA 90 bp | CATATGTACAGGGAAGGGGTTATGCAAAGGAAATCCATAAACGGTGAGATAGAACTTTCAGGGTCTTTATaGCCACCGAAATCTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HMYREGVMQRKSINGEIELSGSL*PPKSLF Trigger: AAAAAGAGATTTCGGTGGCCATAAAGACCCTGAAAG...TTCTATCTCACCGTTTATGGATTTCCTTTGCATAACCCCTTCCCTGTACATATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR GCA 90 bp | AATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACCTTTGGTGGAGGGTCTTTTTCTaGCCGGAAATAATTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NVQLIKYPLNTPSVHDLWWRVFF*PEIIIL Trigger: GAGAATAATTATTTCCGGGCAGAAAAAGACCCTCCA...CCAAAGGTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTACGCGAACTCATGAACTaGTTGAGTAGGGTCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: TANHIIFIHGLIDTQYSLRELMN*LSRVFI Trigger: TATGAAGACCCTACTCAAGCAGTTCATGAGTTCGCG...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGCTCTAGTATACTAAACCTACAACAGATTACATTTGGAAATCTGCCTCTACCCCTTTTTGTTGACTaGTCCCACTTCTCTAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSSILNLQQITFGNLPLPLFVD*SHFSNL Trigger: GAGATTAGAGAAGTGGGACCAGTCAACAAAAAGGGG...TAGAGGCAGATTTCCAAATGTAATCTGTTGTAGGTTTAGTATACTAGAGCTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| 3UTR CAA 72 bp | ATATTGCCTAAGAGAATCAATGCTGTCATAGGCGAATaGGTTCAGATGCTGGATTTGAATTTTGACCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILPKRINAVIGE*VQMLDLNFDLV Trigger: TACCAGGTCAAAATTCAAATCCAGCATCTGAACCAATTCGCCTATGACAGCATTGATTCTCTTAGGCAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| 3UTR CAA 72 bp | ACACATACTGCCAATCATATCATATTTATACATGGCTaGATAGATACTCAGTACAGCCTAGACTGGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: THTANHIIFIHG*IDTQYSLDWVC Trigger: ACACACCCAGTCTAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGTATGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR GCA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTAACATTTGTGCCTCTTaGTCTCAAAATGGTATAACT | + |
|
Preference number: 4 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFNICAS*SQNGIT Trigger: AGTTATACCATTTTGAGAGCAAGAGGCACAAATGTT...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR CCA 90 bp | GACCTTTGGCTAATGCTGAGAATAACTGATCAGGAACCTTTTAATTTTTGCAACCTCTTGCTCTCAAAATaGTATAACTCGTCTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLWLMLRITDQEPFNFCNLLLSK*YNSSLA Trigger: AGCAAGAGACGAGTTATACCATTTTGAGAGCAAGAG...GTTGCAAAAATTAAAAGGTTCCTGATCAGTTATTCTCAGCATTAGCCAAAGGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
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| CDS-3UTR GCA 90 bp | AATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACCTTTGGAATTATTCTCACACCTaGAGTTCATTGAACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NVQLIKYPLNTPSVHDLWNYSHT*SSLNHL Trigger: AAGATGGTTCAATGAACTGCAGGTGTGAGAATAATT...CCAAAGGTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTATGGAGGGTCTTTTTCTaGCCGGAAATAATTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TANHIIFIHGLIDTQYSLWRVFF*PEIIIL Trigger: GAGAATAATTATTTCCGGGCAGAAAAAGACCCTCCA...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTACTCTTGCTCTCAAAATaGTATAACTCGTCTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TANHIIFIHGLIDTQYSLLLLSK*YNSSLA Trigger: AGCAAGAGACGAGTTATACCATTTTGAGAGCAAGAG...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTATTTTCATGTCATCTGTaGAGATCTTGGCAATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TANHIIFIHGLIDTQYSLFSCHL*RSWQWC Trigger: ACACCATTGCCAAGATCTCCACAGATGACATGAAAA...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR GCA 90 bp | TACAAGAATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACAACATTTGTGCCTCTTaGTCTCAAAATGGTATAACT | + |
|
Preference number: 4 (lower is better) Translates to: YKNVQLIKYPLNTPSVHDNICAS*SQNGIT Trigger: AGTTATACCATTTTGAGAGCAAGAGGCACAAATGTT...GTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATTCTTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR GCA 90 bp | TACAAGAATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACTTTCAAATTCAAATTTaGGGCTGTTGGTTCCATATC | + |
|
Preference number: 4 (lower is better) Translates to: YKNVQLIKYPLNTPSVHDFQIQI*GCWFHI Trigger: GATATGGAACCAACAGCCGCAAATTTGAATTTGAAA...GTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATTCTTGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGCTCTAGTATACTAAACCTACAACAGATTACATTTGGAAATCTGCCTCTAGATGGAGAAAGAGTCTaGGCTAGTTTCAAATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSSSILNLQQITFGNLPLDGERV*ASFKFK Trigger: TTTGAATTTGAAACTAGCCCAGACTCTTTCTCCATC...TAGAGGCAGATTTCCAAATGTAATCTGTTGTAGGTTTAGTATACTAGAGCTTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS GCA 90 bp | GCTAGGAGGTCTGTCACTGTCACCGTGGTGTTGGTGAGTCCAAGCTaGCGAGGAAGGAAGCGGACGTTGGGGCTGCACGGCTCACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARRSVTVTVVLVSPS*RGRKRTLGLHGSHC Trigger: GCAGTGTGAGCCGTGCAGCCCCAACGTCCGCTTCCTTCCTCGGCAGCTTGGACTCACCAACACCACGGTGACAGTGACAGACCTCCTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232461.2 ENSMUST00000232654.2 |
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| CDS TCA 90 bp | AGTTGGTGTGAGCTAGGAGGTCTGTCACTGTCACCGTGGTGTTGGTaGGTCCAAGCTGCCGAGGAAGGAAGCGGACGTTGGGGCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SWCELGGLSLSPWCW*VQAAEEGSGRWGCT Trigger: CGTGCAGCCCCAACGTCCGCTTCCTTCCTCGGCAGCTTGGACTCACCAACACCACGGTGACAGTGACAGACCTCCTAGCTCACACCAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232461.2 ENSMUST00000232654.2 |
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| CDS GCA 90 bp | AGCTGCCGAGGAAGGAAGCGGACGTTGGGGCTGCACGGCTCACACTaGCTGACATTCCACCCACACTTTTTACATATGATGTTGAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SCRGRKRTLGLHGSH*LTFHPHFLHMMLKV Trigger: TACCTTCAACATCATATGTAAAAAGTGTGGGTGGAATGTCAGGCAGTGTGAGCCGTGCAGCCCCAACGTCCGCTTCCTTCCTCGGCAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232461.2 ENSMUST00000232654.2 |
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| CDS CCA 90 bp | AGCCAATCACCAGTTGTGTGGAAGGTAGCGATATCGACATTGCTTTaGTCCAGAAGAAGGTTTGATGGCCTTGCAGCCGCGCTGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SQSPVVWKVAISTLL*SRRRFDGLAAALVM Trigger: CATCACCAGCGCGGCTGCAAGGCCATCAAACCTTCTTCTGGACCAAAGCAATGTCGATATCGCTACCTTCCACACAACTGGTGATTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS CCA 90 bp | GCACTTAGCACACTTAGCAGCACCATCGGAAGCCTTGTAGAAGCCTaGTCGACAAGCTTGGCATATGAAACCTCGTTCTTCATACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALSTLSSTIGSLVEA*STSLAYETSFFIPS Trigger: GCTGGGTATGAAGAACGAGGTTTCATATGCCAAGCTTGTCGACCAGGCTTCTACAAGGCTTCCGATGGTGCTGCTAAGTGTGCTAAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232654.2 |
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| CDS-3UTR CAA 90 bp | CATATGTACAGGGAAGGGGTTATGCAAAGGAAATCCATAAACGGTGAGATAGAAGGAAGGAAGCGGACGTaGGGGCTGCACGGCTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: HMYREGVMQRKSINGEIEGRKRT*GLHGSH Trigger: GTGTGAGCCGTGCAGCCCCAACGTCCGCTTCCTTCC...TTCTATCTCACCGTTTATGGATTTCCTTTGCATAACCCCTTCCCTGTACATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR CAA 90 bp | GGGAGCGGTAGCCTCATTGATATGGGAAGGCAATGTAGTTCCTGTACAAAGAGACTGTTGATCAAGATGTaGCGAGCAGCAAGGTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GSGSLIDMGRQCSSCTKRLLIKM*RAARSR Trigger: CCGGGACCTTGCTGCTCGCAACATCTTGATCAACAG...TCTCTTTGTACAGGAACTACATTGCCTTCCCATATCAATGAGGCTACCGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS GCA 90 bp | GTCACAGGAGCTGTATTCGACGCCTGTGAAGATTTCCTTACAGTGTaGTGTCCTCATGCCGTTAAGCCAATCACCAGTTGTGTGGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VTGAVFDACEDFLTV*CPHAVKPITSCVEG Trigger: ACCTTCCACACAACTGGTGATTGGCTTAACGGCATGAGGACAGCACACTGTAAGGAAATCTTCACAGGCGTCGAATACAGCTCCTGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS CCA 90 bp | GCCCCTAACCTCCACCAAAGACTGGGAGTCCATGGGCACTGTGTCTaGAAACATAGCCAGATTCTTCACTGTAAACGGGCACTTTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: APNLHQRLGVHGHCV*KHSQILHCKRALFE Trigger: TTCAAAAAGTGCCCGTTTACAGTGAAGAATCTGGCTATGTTTCCAGACACAGTGCCCATGGACTCCCAGTCTTTGGTGGAGGTTAGGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232654.2 |
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| CDS TCA 90 bp | CACCATCGGAAGCCTTGTAGAAGCCTGGTCGACAAGCTTGGCATATaGAACCTCGTTCTTCATACCCAGCATTGCAAGTGCATTTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HHRKPCRSLVDKLGI*NLVLHTQHCKCICQ Trigger: TTGGCAAATGCACTTGCAATGCTGGGTATGAAGAACGAGGTTTCATATGCCAAGCTTGTCGACCAGGCTTCTACAAGGCTTCCGATGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232654.2 |
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| CDS-3UTR CAA 90 bp | GACCTTTGGCTAATGCTGAGAATAACTGATCAGGAACCTTTTAATTTTTGCAACGGAAGGAAGCGGACGTaGGGGCTGCACGGCTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: DLWLMLRITDQEPFNFCNGRKRT*GLHGSH Trigger: GTGTGAGCCGTGCAGCCCCAACGTCCGCTTCCTTCC...GTTGCAAAAATTAAAAGGTTCCTGATCAGTTATTCTCAGCATTAGCCAAAGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
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| CDS TCA 90 bp | AGGACAATGATGGCCACAGCTGCGGAAATAGCAATCATCACCACATaGCTGTTTTCACCGGAGATGGAGAAAGAGTCTGGGCTAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTMMATAAEIAIITT*LFSPEMEKESGLVS Trigger: TGAAACTAGCCCAGACTCTTTCTCCATCTCCGGTGAAAACAGTCATGTGGTGATGATTGCTATTTCCGCAGCTGTGGCCATCATTGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS-3UTR CAA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTACTGTCACCGTGGTGTaGGTGAGTCCAAGCTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFTVTVV*VSPSCR Trigger: TCGGCAGCTTGGACTCACCAACACCACGGTGACAGT...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR CAA 90 bp | GGGAGCGGTAGCCTCATTGATATGGGAAGGCAATGTAGTTCCTGTACAAAGAGAGTAGCGATATCGACATaGCTTTGGTCCAGAAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSGSLIDMGRQCSSCTKRVAIST*LWSRRR Trigger: CCTTCTTCTGGACCAAAGCAATGTCGATATCGCTAC...TCTCTTTGTACAGGAACTACATTGCCTTCCCATATCAATGAGGCTACCGCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS CCA 90 bp | CGCTGCAAACTTCTCCAAATTCACCTGCTCCAACAACTTTGTCGATaGATATATTGGTGGCATCCAACTCCTTCGCGAACTCATGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: RCKLLQIHLLQQLCR*IYWWHPTPSRTHEL Trigger: CAGTTCATGAGTTCGCGAAGGAGTTGGATGCCACCAATATATCCATCGACAAAGTTGTTGGAGCAGGTGAATTTGGAGAAGTTTGCAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS CCA 90 bp | TTACAGTGTGCTGTCCTCATGCCGTTAAGCCAATCACCAGTTGTGTaGAAGGTAGCGATATCGACATTGCTTTGGTCCAGAAGAAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQCAVLMPLSQSPVV*KVAISTLLWSRRRF Trigger: AAACCTTCTTCTGGACCAAAGCAATGTCGATATCGCTACCTTCCACACAACTGGTGATTGGCTTAACGGCATGAGGACAGCACACTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS-3UTR CAA 90 bp | GGGAGCGGTAGCCTCATTGATATGGGAAGGCAATGTAGTTCCTGTACAAAGAGATTGTCGATGGATATATaGGTGGCATCCAACTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSGSLIDMGRQCSSCTKRLSMDI*VASNSF Trigger: GAAGGAGTTGGATGCCACCAATATATCCATCGACAA...TCTCTTTGTACAGGAACTACATTGCCTTCCCATATCAATGAGGCTACCGCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR CAA 90 bp | CAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTCAAGTCATCTGTGGAGATCTaGGCAATGGTGTCACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QHVSSSGCPLGTSFLIFKSSVEI*AMVSQE Trigger: CTCCTGTGACACCATTGCCAAGATCTCCACAGATGA...CTTGAATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS CCA 90 bp | ATCAAAGATCTCAACAAGAAACAAAGTGCACTGAACCCCATGGGATaGGTAGGAGATCCAGCCCAGCTCTCCTTGAATTGTTTTCGAATC | + |
|
Preference number: 5 (lower is better) Translates to: IKDLNKKQSALNPMG*VGDPAQLSLNCFRI Trigger: GATTCGAAAACAATTCAAGGAGAGCTGGGCTGGATCTCCTACCCATCCCATGGGGTTCAGTGCACTTTGTTTCTTGTTGAGATCTTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
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| CDS-3UTR CAA 90 bp | GACCTTTGGCTAATGCTGAGAATAACTGATCAGGAACCTTTTAATTTTTGCAACACTGTCACCGTGGTGTaGGTGAGTCCAAGCTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: DLWLMLRITDQEPFNFCNTVTVV*VSPSCR Trigger: TCGGCAGCTTGGACTCACCAACACCACGGTGACAGT...GTTGCAAAAATTAAAAGGTTCCTGATCAGTTATTCTCAGCATTAGCCAAAGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
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| CDS-3UTR CAA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTAGGTCCAGAAGAAGGTTaGATGGCCTTGCAGCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TANHIIFIHGLIDTQYSLGPEEG*MALQPR Trigger: GCGCGGCTGCAAGGCCATCAAACCTTCTTCTGGACC...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR CAA 90 bp | GACTACATCCCCATAATGAGACATCTCATTCCTCCATTGTCTGTGGATGTGGATAGGTTAAAGGTCTCCTaGCAAGTCCCCAAAACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: DYIPIMRHLIPPLSVDVDRLKVS*QVPKTN Trigger: ATTGGTTTTGGGGACTTGCAAGGAGACCTTTAACCT...ATCCACATCCACAGACAATGGAGGAATGAGATGTCTCATTATGGGGATGTAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR CAA 90 bp | AGCATCTTATTTATCATTTCCATCTGTCTGCAGGATGCTGCTGCATCTTCCCGTGTAAACGGGCACTTTTaGAAGTACACTCTCACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SILFIISICLQDAAASSRVNGHF*KYTLTD Trigger: GTCTGTGAGAGTGTACTTCAAAAAGTGCCCGTTTAC...ACGGGAAGATGCAGCAGCATCCTGCAGACAGATGGAAATGATAAATAAGATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR CAA 90 bp | GACTACATCCCCATAATGAGACATCTCATTCCTCCATTGTCTGTGGATGTGGATCACACCTGCAGTTCATaGAACCATCTTCTTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DYIPIMRHLIPPLSVDVDHTCSS*NHLLVL Trigger: CAACACAAGAAGATGGTTCAATGAACTGCAGGTGTG...ATCCACATCCACAGACAATGGAGGAATGAGATGTCTCATTATGGGGATGTAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
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| CDS-3UTR CAA 90 bp | AGCATCTTATTTATCATTTCCATCTGTCTGCAGGATGCTGCTGCATCTTCCCGTCCTGCTCCAACAACTTaGTCGATGGATATATTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SILFIISICLQDAAASSRPAPTT*SMDILV Trigger: CACCAATATATCCATCGACAAAGTTGTTGGAGCAGG...ACGGGAAGATGCAGCAGCATCCTGCAGACAGATGGAAATGATAAATAAGATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CAA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTGTGATGTCCACCTTATaGGTATCTTTCCTCCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFVMSTL*VSFLPW Trigger: CCAGGGGAGGAAAGATACCAATAAGGTGGACATCAC...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CAA 90 bp | CTTCGTGAACTGATGCTCTCGGAATTTGACGCCATGATCATCATCAGACTCCATCCAGCTCTCCTTGAATaGTTTTCGAATCTAGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LRELMLSEFDAMIIIRLHPALLE*FSNLVD Trigger: ATCTACTAGATTCGAAAACAATTCAAGGAGAGCTGG...ATGGAGTCTGATGATGATCATGGCGTCAAATTCCGAGAGCATCAGTTCACGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
||
| CDS-3UTR CAA 90 bp | CAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTCAAGTTCTGGGTACCCAGTTaGTCCTCAGCCAATTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: QHVSSSGCPLGTSFLIFKFWVPS*SSANYF Trigger: AAAATAATTGGCTGAGGACAAACTGGGTACCCAGAA...CTTGAATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CAA 90 bp | CATATGTACAGGGAAGGGGTTATGCAAAGGAAATCCATAAACGGTGAGATAGAAGGAGGGTCCTCCTCTTaGGAATTATTGACACAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HMYREGVMQRKSINGEIEGGSSS*ELLTQE Trigger: CTCTTGTGTCAATAATTCCAAAGAGGAGGACCCTCC...TTCTATCTCACCGTTTATGGATTTCCTTTGCATAACCCCTTCCCTGTACATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CAA 90 bp | CAGCATGTGTCATCATCAGGATGCCCGTTAGGCACATCCTTCTTAATATTCAAGCACACTAAGTTACTGTaGATCAAGATGTTGCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QHVSSSGCPLGTSFLIFKHTKLL*IKMLRA Trigger: TGCTCGCAACATCTTGATCAACAGTAACTTAGTGTG...CTTGAATATTAAGAAGGATGTGCCTAACGGGCATCCTGATGATGACACATGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CAA 90 bp | AATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACCTTTGGGGAGGGTCCTCCTCTTaGGAATTATTGACACAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NVQLIKYPLNTPSVHDLWGGSSS*ELLTQE Trigger: CTCTTGTGTCAATAATTCCAAAGAGGAGGACCCTCC...CCAAAGGTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS GCA 90 bp | AGTAGTATCTGGCTTGAGGCTACTGATAGTAACATTTGTGCCTCTTaGTCTCAAAATGGTATAACTCGTCTCTTGCTCCTGCTTTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: SSIWLEATDSNICAS*SQNGITRLLLLLFI Trigger: TATGAAAAGCAGGAGCAAGAGACGAGTTATACCATTTTGAGAGCAAGAGGCACAAATGTTACTATCAGTAGCCTCAAGCCAGATACTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232461.2 ENSMUST00000232654.2 |
||
| CDS-3UTR CAA 90 bp | CATATGTACAGGGAAGGGGTTATGCAAAGGAAATCCATAAACGGTGAGATAGAACCTCAGCCAATTATTTaGGCTGTGATCCATGACATT | + |
|
Preference number: 5 (lower is better) Translates to: HMYREGVMQRKSINGEIEPQPII*AVIHDI Trigger: AATGTCATGGATCACAGCCAAAATAATTGGCTGAGG...TTCTATCTCACCGTTTATGGATTTCCTTTGCATAACCCCTTCCCTGTACATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CAA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTTCTCTAATCTCAGTGTaGAGTTTCAGAATGCGATCC | + |
|
Preference number: 5 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFSLISV*SFRMRS Trigger: GGATCGCATTCTGAAACTCAACACTGAGATTAGAGA...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CAA 90 bp | AATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACCTTTGGCACACCTGCAGTTCATaGAACCATCTTCTTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NVQLIKYPLNTPSVHDLWHTCSS*NHLLVL Trigger: CAACACAAGAAGATGGTTCAATGAACTGCAGGTGTG...CCAAAGGTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CAA 90 bp | TCTCATTCCTCCATTGTCTGTGGATGTGGATTTATTGGTTCGATGAGTTGCTTTGGTATAACTCGTCTCTaGCTCCTGCTTTTCATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SHSSIVCGCGFIGSMSCFGITRL*LLLFIV Trigger: TACTATGAAAAGCAGGAGCAAGAGACGAGTTATACC...AAAGCAACTCATCGAACCAATAAATCCACATCCACAGACAATGGAGGAATGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CAA 90 bp | CTCAACACACCTTCAGTGCATGACCTTTGGCTAATGCTGAGAATAACTGATCAGGTTTCAAATTCAAATTaGCGGCTGTTGGTTCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: LNTPSVHDLWLMLRITDQVSNSN*RLLVPY Trigger: ATATGGAACCAACAGCCGCAAATTTGAATTTGAAAC...CTGATCAGTTATTCTCAGCATTAGCCAAAGGTCATGCACTGAAGGTGTGTTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTAACGATCTGCTCGAACTaGGGTCTGTTGTTCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TANHIIFIHGLIDTQYSLTICSN*GLLFLS Trigger: AGACAGGAACAACAGACCCAAGTTCGAGCAGATCGT...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS GCA 90 bp | AGTAGTATCTGGCTTGAGGCTACTGATAGTAACATTTGTGCCTCTTaGTCTCAAAATGGTATAACTCGTCTCTTGCTCCTTTTCATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSIWLEATDSNICAS*SQNGITRLLLLFIV Trigger: TACTATGAAAAGGAGCAAGAGACGAGTTATACCATTTTGAGAGCAAGAGGCACAAATGTTACTATCAGTAGCCTCAAGCCAGATACTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232049.2 |
||
| CDS-3UTR CAA 90 bp | CATATGTACAGGGAAGGGGTTATGCAAAGGAAATCCATAAACGGTGAGATAGAACCAGCTCTCCTTGAATaGTTTTCGAATCTAGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HMYREGVMQRKSINGEIEPALLE*FSNLVD Trigger: ATCTACTAGATTCGAAAACAATTCAAGGAGAGCTGG...TTCTATCTCACCGTTTATGGATTTCCTTTGCATAACCCCTTCCCTGTACATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS-3UTR CAA 90 bp | AATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACCTTTGGCCTCAGCCAATTATTTaGGCTGTGATCCATGACATT | + |
|
Preference number: 5 (lower is better) Translates to: NVQLIKYPLNTPSVHDLWPQPII*AVIHDI Trigger: AATGTCATGGATCACAGCCAAAATAATTGGCTGAGG...CCAAAGGTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CAA 90 bp | TACAAGAATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACAGGTTAAAGGTCTCCTaGCAAGTCCCCAAAACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: YKNVQLIKYPLNTPSVHDRLKVS*QVPKTN Trigger: ATTGGTTTTGGGGACTTGCAAGGAGACCTTTAACCT...GTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATTCTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CAA 90 bp | TACAAGAATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACGTAAACGGGCACTTTTaGAAGTACACTCTCACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: YKNVQLIKYPLNTPSVHDVNGHF*KYTLTD Trigger: GTCTGTGAGAGTGTACTTCAAAAAGTGCCCGTTTAC...GTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATTCTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CAA 90 bp | TACAAGAATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACTTCTGGGTACCCAGTTaGTCCTCAGCCAATTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: YKNVQLIKYPLNTPSVHDFWVPS*SSANYF Trigger: AAAATAATTGGCTGAGGACAAACTGGGTACCCAGAA...GTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATTCTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CAA 90 bp | TACAAGAATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACTCTCTAATCTCAGTGTaGAGTTTCAGAATGCGATCC | + |
|
Preference number: 5 (lower is better) Translates to: YKNVQLIKYPLNTPSVHDSLISV*SFRMRS Trigger: GGATCGCATTCTGAAACTCAACACTGAGATTAGAGA...GTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATTCTTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CAA 90 bp | GACCTTTGGCTAATGCTGAGAATAACTGATCAGGAACCTTTTAATTTTTGCAACGGTATAACTCGTCTCTaGCTCCTGCTTTTCATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: DLWLMLRITDQEPFNFCNGITRL*LLLFIV Trigger: TACTATGAAAAGCAGGAGCAAGAGACGAGTTATACC...GTTGCAAAAATTAAAAGGTTCCTGATCAGTTATTCTCAGCATTAGCCAAAGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CAA 90 bp | TACAAGAATGTGCAACTTATTAAATATCCTCTCAACACACCTTCAGTGCATGACCCAGCTCTCCTTGAATaGTTTTCGAATCTAGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: YKNVQLIKYPLNTPSVHDPALLE*FSNLVD Trigger: ATCTACTAGATTCGAAAACAATTCAAGGAGAGCTGG...GTCATGCACTGAAGGTGTGTTGAGAGGATATTTAATAAGTTGCACATTCTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCCAATCATATCATATTTATACATGGCTTGATAGATACTCAGTACAGCCTAGTTTCAAATTCAAATTaGCGGCTGTTGGTTCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: TANHIIFIHGLIDTQYSLVSNSN*RLLVPY Trigger: ATATGGAACCAACAGCCGCAAATTTGAATTTGAAAC...TAGGCTGTACTGAGTATCTATCAAGCCATGTATAAATATGATATGATTGGCAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064405.8 |
||
| CDS GCA 72 bp | TCTGTCACTGTCACCGTGGTGTTGGTGAGTCCAAGCTaGCGAGGAAGGAAGCGGACGTTGGGGCTGCACGGC | + |
|
Preference number: 6 (lower is better) Translates to: SVTVTVVLVSPS*RGRKRTLGLHG Trigger: GCCGTGCAGCCCCAACGTCCGCTTCCTTCCTCGGCAGCTTGGACTCACCAACACCACGGTGACAGTGACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232461.2 ENSMUST00000232654.2 |
||
| CDS CAA 72 bp | TTGGTGAGTCCAAGCTGCCGAGGAAGGAAGCGGACGTaGGGGCTGCACGGCTCACACTGCCTGACATTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LVSPSCRGRKRT*GLHGSHCLTFH Trigger: GTGGAATGTCAGGCAGTGTGAGCCGTGCAGCCCCAACGTCCGCTTCCTTCCTCGGCAGCTTGGACTCACCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232461.2 ENSMUST00000232654.2 |
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| CDS CAA 90 bp | ACCGTGGTGTTGGTGAGTCCAAGCTGCCGAGGAAGGAAGCGGACGTaGGGGCTGCACGGCTCACACTGCCTGACATTCCACCCACACTTT | + |
|
Preference number: 6 (lower is better) Translates to: TVVLVSPSCRGRKRT*GLHGSHCLTFHPHF Trigger: AAAGTGTGGGTGGAATGTCAGGCAGTGTGAGCCGTGCAGCCCCAACGTCCGCTTCCTTCCTCGGCAGCTTGGACTCACCAACACCACGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232461.2 ENSMUST00000232654.2 |
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| CDS TCA 72 bp | GAGCTAGGAGGTCTGTCACTGTCACCGTGGTGTTGGTaGGTCCAAGCTGCCGAGGAAGGAAGCGGACGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: ELGGLSLSPWCW*VQAAEEGSGRW Trigger: CCAACGTCCGCTTCCTTCCTCGGCAGCTTGGACTCACCAACACCACGGTGACAGTGACAGACCTCCTAGCTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232461.2 ENSMUST00000232654.2 |
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| CDS CCA 72 bp | CCAACATCAACTGATACAAGGCAGCTGGGCAATCCATaGGAGGTGGCAGGCGATAGCCCTCATCCACAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PTSTDTRQLGNP*EVAGDSPHPQP Trigger: AGGCTGTGGATGAGGGCTATCGCCTGCCACCTCCCATGGATTGCCCAGCTGCCTTGTATCAGTTGATGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS GCA 72 bp | GGAAGGAAGCGGACGTTGGGGCTGCACGGCTCACACTaGCTGACATTCCACCCACACTTTTTACATATGATG | + |
|
Preference number: 6 (lower is better) Translates to: GRKRTLGLHGSH*LTFHPHFLHMM Trigger: CATCATATGTAAAAAGTGTGGGTGGAATGTCAGGCAGTGTGAGCCGTGCAGCCCCAACGTCCGCTTCCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232461.2 ENSMUST00000232654.2 |
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| CDS CCA 72 bp | CCAGTTGTGTGGAAGGTAGCGATATCGACATTGCTTTaGTCCAGAAGAAGGTTTGATGGCCTTGCAGCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: PVVWKVAISTLL*SRRRFDGLAAA Trigger: CGCGGCTGCAAGGCCATCAAACCTTCTTCTGGACCAAAGCAATGTCGATATCGCTACCTTCCACACAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS CAA 72 bp | TCTGTGCTGCAGTACATCCTGGGAGGGTCCTCCTCTTaGGAATTATTGACACAAGAGCCCCTAACCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SVLQYILGGSSS*ELLTQEPLTST Trigger: GGTGGAGGTTAGGGGCTCTTGTGTCAATAATTCCAAAGAGGAGGACCCTCCCAGGATGTACTGCAGCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232654.2 |
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| CDS CAA 90 bp | TCTGTGCTGCAGTACATCCTGGGAGGGTCCTCCTCTTTGGAATTATaGACACAAGAGCCCCTAACCTCCACCAAAGACTGGGAGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SVLQYILGGSSSLEL*TQEPLTSTKDWESM Trigger: CATGGACTCCCAGTCTTTGGTGGAGGTTAGGGGCTCTTGTGTCAATAATTCCAAAGAGGAGGACCCTCCCAGGATGTACTGCAGCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232654.2 |
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| CDS CAA 90 bp | CCGTTAAGCCAATCACCAGTTGTGTGGAAGGTAGCGATATCGACATaGCTTTGGTCCAGAAGAAGGTTTGATGGCCTTGCAGCCGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PLSQSPVVWKVAIST*LWSRRRFDGLAAAL Trigger: CAGCGCGGCTGCAAGGCCATCAAACCTTCTTCTGGACCAAAGCAATGTCGATATCGCTACCTTCCACACAACTGGTGATTGGCTTAACGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS CAA 90 bp | GGTCGACAAGCTTGGCATATGAAACCTCGTTCTTCATACCCAGCATaGCAAGTGCATTTGCCAATGGGGACCAGCCATTCCCCTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GRQAWHMKPRSSYPA*QVHLPMGTSHSPSV Trigger: CACAGAAGGGGAATGGCTGGTCCCCATTGGCAAATGCACTTGCAATGCTGGGTATGAAGAACGAGGTTTCATATGCCAAGCTTGTCGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232654.2 |
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| CDS CAA 90 bp | GGCTCACACTGCCTGACATTCCACCCACACTTTTTACATATGATGTaGAAGGTAATATCCTTCCGGCCTCCTGTGTCCAGGGGCCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: GSHCLTFHPHFLHMM*KVISFRPPVSRGQL Trigger: GAGTTGGCCCCTGGACACAGGAGGCCGGAAGGATATTACCTTCAACATCATATGTAAAAAGTGTGGGTGGAATGTCAGGCAGTGTGAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232461.2 ENSMUST00000232654.2 |
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| CDS TCA 72 bp | TGGCAATGGTGTCACAGGAGCTGTATTCGACGCCTGTaGAGATTTCCTTACAGTGTGCTGTCCTCATGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: WQWCHRSCIRRL*RFPYSVLSSCR Trigger: ACGGCATGAGGACAGCACACTGTAAGGAAATCTTCACAGGCGTCGAATACAGCTCCTGTGACACCATTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS CCA 72 bp | CTCCACCAAAGACTGGGAGTCCATGGGCACTGTGTCTaGAAACATAGCCAGATTCTTCACTGTAAACGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LHQRLGVHGHCV*KHSQILHCKRA Trigger: TGCCCGTTTACAGTGAAGAATCTGGCTATGTTTCCAGACACAGTGCCCATGGACTCCCAGTCTTTGGTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232654.2 |
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| CDS CCA 72 bp | TTATTGACACAAGAGCCCCTAACCTCCACCAAAGACTaGGAGTCCATGGGCACTGTGTCTGGAAACATAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLTQEPLTSTKD*ESMGTVSGNIA Trigger: GGCTATGTTTCCAGACACAGTGCCCATGGACTCCCAGTCTTTGGTGGAGGTTAGGGGCTCTTGTGTCAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232654.2 |
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| CDS CAA 72 bp | CAGTACATCCTGGGAGGGTCCTCCTCTTTGGAATTATaGACACAAGAGCCCCTAACCTCCACCAAAGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: QYILGGSSSLEL*TQEPLTSTKDW Trigger: CCAGTCTTTGGTGGAGGTTAGGGGCTCTTGTGTCAATAATTCCAAAGAGGAGGACCCTCCCAGGATGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232654.2 |
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| CDS CAA 90 bp | CTTAGCAGCACCATCGGAAGCCTTGTAGAAGCCTGGTCGACAAGCTaGGCATATGAAACCTCGTTCTTCATACCCAGCATTGCAAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSTIGSLVEAWSTS*AYETSFFIPSIASA Trigger: TGCACTTGCAATGCTGGGTATGAAGAACGAGGTTTCATATGCCAAGCTTGTCGACCAGGCTTCTACAAGGCTTCCGATGGTGCTGCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232654.2 |
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| CDS CAA 90 bp | TCACCGGAGATGGAGAAAGAGTCTGGGCTAGTTTCAAATTCAAATTaGCGGCTGTTGGTTCCATATCCCGCTGCTGTCCGAGCTCGGATT | + |
|
Preference number: 6 (lower is better) Translates to: SPEMEKESGLVSNSN*RLLVPYPAAVRARI Trigger: AATCCGAGCTCGGACAGCAGCGGGATATGGAACCAACAGCCGCAAATTTGAATTTGAAACTAGCCCAGACTCTTTCTCCATCTCCGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS TCA 72 bp | ATGGCCACAGCTGCGGAAATAGCAATCATCACCACATaGCTGTTTTCACCGGAGATGGAGAAAGAGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: MATAAEIAIITT*LFSPEMEKESG Trigger: CCCAGACTCTTTCTCCATCTCCGGTGAAAACAGTCATGTGGTGATGATTGCTATTTCCGCAGCTGTGGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
||
| CDS CCA 72 bp | ACACTTAGCAGCACCATCGGAAGCCTTGTAGAAGCCTaGTCGACAAGCTTGGCATATGAAACCTCGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TLSSTIGSLVEA*STSLAYETSFF Trigger: GAAGAACGAGGTTTCATATGCCAAGCTTGTCGACCAGGCTTCTACAAGGCTTCCGATGGTGCTGCTAAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232654.2 |
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| CDS CCA 72 bp | GCTGTCCTCATGCCGTTAAGCCAATCACCAGTTGTGTaGAAGGTAGCGATATCGACATTGCTTTGGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AVLMPLSQSPVV*KVAISTLLWSR Trigger: TCTGGACCAAAGCAATGTCGATATCGCTACCTTCCACACAACTGGTGATTGGCTTAACGGCATGAGGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
||
| CDS CCA 72 bp | CTCAACAAGAAACAAAGTGCACTGAACCCCATGGGATaGGTAGGAGATCCAGCCCAGCTCTCCTTGAATTGT | + |
|
Preference number: 6 (lower is better) Translates to: LNKKQSALNPMG*VGDPAQLSLNC Trigger: ACAATTCAAGGAGAGCTGGGCTGGATCTCCTACCCATCCCATGGGGTTCAGTGCACTTTGTTTCTTGTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
||
| CDS CAA 72 bp | GCTTGGCATATGAAACCTCGTTCTTCATACCCAGCATaGCAAGTGCATTTGCCAATGGGGACCAGCCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: AWHMKPRSSYPA*QVHLPMGTSHS Trigger: GGAATGGCTGGTCCCCATTGGCAAATGCACTTGCAATGCTGGGTATGAAGAACGAGGTTTCATATGCCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232654.2 |
||
| CDS CAA 72 bp | GAGTCTGGGCTAGTTTCAAATTCAAATTTGCGGCTGTaGGTTCCATATCCCGCTGCTGTCCGAGCTCGGATT | + |
|
Preference number: 6 (lower is better) Translates to: ESGLVSNSNLRL*VPYPAAVRARI Trigger: AATCCGAGCTCGGACAGCAGCGGGATATGGAACCAACAGCCGCAAATTTGAATTTGAAACTAGCCCAGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
||
| CDS CAA 72 bp | TCCCAAAGTGAAGGCGCTTCTCCTCTGCACTGTGTTTaGACTTGTGATAGCCACAAAACCTCCCGACCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SQSEGASPLHCV*TCDSHKTSRPE Trigger: TTCTGGTCGGGAGGTTTTGTGGCTATCACAAGTCAAAACACAGTGCAGAGGAGAAGCGCCTTCACTTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
||
| CDS CAA 72 bp | CAGTCTGGGCTAGTTTCAAATTCAAATTTGCGGCTGTaGGTTCCATATCCCGCTGCTGTCCGAGCTCGGATT | + |
|
Preference number: 6 (lower is better) Translates to: QSGLVSNSNLRL*VPYPAAVRARI Trigger: AATCCGAGCTCGGACAGCAGCGGGATATGGAACCAACAGCCGCAAATTTGAATTTGAAACTAGCCCAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232654.2 |
||
| CDS TCA 72 bp | AAGCCTTGTAGAAGCCTGGTCGACAAGCTTGGCATATaGAACCTCGTTCTTCATACCCAGCATTGCAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: KPCRSLVDKLGI*NLVLHTQHCKC Trigger: GCACTTGCAATGCTGGGTATGAAGAACGAGGTTTCATATGCCAAGCTTGTCGACCAGGCTTCTACAAGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232654.2 |
||
| CDS TCA 72 bp | CTGAGACCTGGAAGTTTTAAGTGGCCATTCCCAAAGTaGAGGCGCTTCTCCTCTGCACTGTGTTTTGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRPGSFKWPFPK*RRFSSALCFDL Trigger: CAAGTCAAAACACAGTGCAGAGGAGAAGCGCCTTCACTTTGGGAATGGCCACTTAAAACTTCCAGGTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
||
| CDS GCA 72 bp | GCTGTATTCGACGCCTGTGAAGATTTCCTTACAGTGTaGTGTCCTCATGCCGTTAAGCCAATCACCAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: AVFDACEDFLTV*CPHAVKPITSC Trigger: ACAACTGGTGATTGGCTTAACGGCATGAGGACAGCACACTGTAAGGAAATCTTCACAGGCGTCGAATACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
||
| CDS CAA 72 bp | ACCATCGGAAGCCTTGTAGAAGCCTGGTCGACAAGCTaGGCATATGAAACCTCGTTCTTCATACCCAGCATT | + |
|
Preference number: 6 (lower is better) Translates to: TIGSLVEAWSTS*AYETSFFIPSI Trigger: AATGCTGGGTATGAAGAACGAGGTTTCATATGCCAAGCTTGTCGACCAGGCTTCTACAAGGCTTCCGATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232654.2 |
||
| CDS CAA 72 bp | TGCCTGACATTCCACCCACACTTTTTACATATGATGTaGAAGGTAATATCCTTCCGGCCTCCTGTGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CLTFHPHFLHMM*KVISFRPPVSR Trigger: CCTGGACACAGGAGGCCGGAAGGATATTACCTTCAACATCATATGTAAAAAGTGTGGGTGGAATGTCAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 ENSMUST00000232461.2 ENSMUST00000232654.2 |
||
| CDS CAA 72 bp | ATGGAGAAAGAGTCTGGGCTAGTTTCAAATTCAAATTaGCGGCTGTTGGTTCCATATCCCGCTGCTGTCCGA | + |
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Preference number: 6 (lower is better) Translates to: MEKESGLVSNSN*RLLVPYPAAVR Trigger: TCGGACAGCAGCGGGATATGGAACCAACAGCCGCAAATTTGAATTTGAAACTAGCCCAGACTCTTTCTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS CAA 72 bp | CAATCACCAGTTGTGTGGAAGGTAGCGATATCGACATaGCTTTGGTCCAGAAGAAGGTTTGATGGCCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: QSPVVWKVAIST*LWSRRRFDGLA Trigger: TGCAAGGCCATCAAACCTTCTTCTGGACCAAAGCAATGTCGATATCGCTACCTTCCACACAACTGGTGATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS GCA 72 bp | TTCCAAATGGATCAAAGATCTCAACAAGAAACAAAGTaGACTGAACCCCATGGGATGGGTAGGAGATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: FQMDQRSQQETK*TEPHGMGRRSS Trigger: GCTGGATCTCCTACCCATCCCATGGGGTTCAGTGCACTTTGTTTCTTGTTGAGATCTTTGATCCATTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231270.2 |
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| CDS CCA 72 bp | ATTCACCTGCTCCAACAACTTTGTCGATGGATATATTaGTGGCATCCAACTCCTTCGCGAACTCATGAACTG | + |
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Preference number: 6 (lower is better) Translates to: IHLLQQLCRWIY*WHPTPSRTHEL Trigger: CAGTTCATGAGTTCGCGAAGGAGTTGGATGCCACCAATATATCCATCGACAAAGTTGTTGGAGCAGGTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS CCA 72 bp | CTTCTCCAAATTCACCTGCTCCAACAACTTTGTCGATaGATATATTGGTGGCATCCAACTCCTTCGCGAACT | + |
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Preference number: 6 (lower is better) Translates to: LLQIHLLQQLCR*IYWWHPTPSRT Trigger: AGTTCGCGAAGGAGTTGGATGCCACCAATATATCCATCGACAAAGTTGTTGGAGCAGGTGAATTTGGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS GCA 72 bp | TGGCTTGAGGCTACTGATAGTAACATTTGTGCCTCTTaGTCTCAAAATGGTATAACTCGTCTCTTGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: WLEATDSNICAS*SQNGITRLLLL Trigger: CAGGAGCAAGAGACGAGTTATACCATTTTGAGAGCAAGAGGCACAAATGTTACTATCAGTAGCCTCAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064405.8 ENSMUST00000232461.2 ENSMUST00000232654.2 |
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| CDS CCA 72 bp | CACATGACTGTTTTCACCGGAGATGGAGAAAGAGTCTaGGCTAGTTTCAAATTCAAATTTGCGGCTGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: HMTVFTGDGERV*ASFKFKFAAVG Trigger: ACCAACAGCCGCAAATTTGAATTTGAAACTAGCCCAGACTCTTTCTCCATCTCCGGTGAAAACAGTCATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS CAA 72 bp | CTGCAAACTTCTCCAAATTCACCTGCTCCAACAACTTaGTCGATGGATATATTGGTGGCATCCAACTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LQTSPNSPAPTT*SMDILVASNSF Trigger: GAAGGAGTTGGATGCCACCAATATATCCATCGACAAAGTTGTTGGAGCAGGTGAATTTGGAGAAGTTTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064405.8 ENSMUST00000232049.2 |
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| CDS GCA 72 bp | TGGCTTGAGGCTACTGATAGTAACATTTGTGCCTCTTaGTCTCAAAATGGTATAACTCGTCTCTTGCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: WLEATDSNICAS*SQNGITRLLLL Trigger: AAGGAGCAAGAGACGAGTTATACCATTTTGAGAGCAAGAGGCACAAATGTTACTATCAGTAGCCTCAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232049.2 |
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