Pregenerated sensors for EPHA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029859Ensembl transcript IDs: ENSMUST00000073387.5, ENSMUST00000204357.2
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AACCCTCCCCCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCAGGCAGGCAGAGGGCTaGAGCATCTTTTCAGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: NPPPEPTHSPLHLYPSTPRQAEG*SIFSVD Trigger: ATCCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCT...GGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGGGGGAGGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCTTTATAAACTCAAAGGCAGAGTTCTaGTTGACTGGGCAGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PEPTHSPLHLYPSTPFINSKAEF*LTGQEQ Trigger: CTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGA...GTTTATAAAGGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| 3UTR TCA 72 bp | GGCAGGAGCAGCACCAATAGCCTACATTTCGTAGGCTaGGGAAAGGCCCAGGGAGTTGACTGTAGCCCCGTC | + |
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Preference number: 3 (lower is better) Translates to: GRSSTNSLHFVG*GKAQGVDCSPV Trigger: GACGGGGCTACAGTCAACTCCCTGGGCCTTTCCTCAGCCTACGAAATGTAGGCTATTGGTGCTGCTCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | GTTGACTGTAGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTGTCCCCCTGTATCTCTaGGGGGCTCCCAGCGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VDCSPVLANGGRQRAGASVPLYL*GAPSAG Trigger: CCCTGCGCTGGGAGCCCCCCAGAGATACAGGGGGAC...AGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | AACCCTCCCCCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCCAGAGCCACTCAGGCTaGGCAGGCGTAAGGTCACCC | + |
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Preference number: 4 (lower is better) Translates to: NPPPEPTHSPLHLYPSTPQSHSG*AGVRSP Trigger: GGGTGACCTTACGCCTGCCCAGCCTGAGTGGCTCTG...GGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGGGGGAGGGTT 63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | CCCAGGGAGTTGACTGTAGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGAGATGTGCCTGCAGCTaGAGGAAGTGGGGTCGACGG | + |
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Preference number: 4 (lower is better) Translates to: PRELTVAPSLLMEAGRGLRCACS*RKWGRR Trigger: CCGTCGACCCCACTTCCTCCAGCTGCAGGCACATCT...CAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAACTCCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR TCA 90 bp | CCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCTTTATAAACAGAGGCCACGGCGGGTaGGGTGGCCCAACGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PEPTHSPLHLYPSTPFINRGHGG*GGPTSS Trigger: GCTGCTCGTTGGGCCACCTCACCCGCCGTGGCCTCT...GTTTATAAAGGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | CCCAGGGAGTTGACTGTAGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGCCTTTTCCACAGGGTTaGCAGGGACCCCCATCCTGT | + |
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Preference number: 4 (lower is better) Translates to: PRELTVAPSLLMEAGRGLPFPQG*QGPPSC Trigger: ACAGGATGGGGGTCCCTGCCAACCCTGTGGAAAAGG...CAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAACTCCCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR TCA 90 bp | CCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAATAGCCGGCTCGCACTGGCACTaGCCCACAGGCACCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PWFKGRVLIDWAGAAPIAGSHWH*PTGTSH Trigger: GTGGCTGGTGCCTGTGGGTCAGTGCCAGTGCGAGCC...GGCTATTGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR GCA 90 bp | AACCCTCCCCCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCGTCGTCGGAGCTGAATaGCCACATCCTGGTCACTCT | + |
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Preference number: 4 (lower is better) Translates to: NPPPEPTHSPLHLYPSTPVVGAE*PHPGHS Trigger: AGAGTGACCAGGATGTGGGCATTCAGCTCCGACGAC...GGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGGGGGAGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR GCA 90 bp | CCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGATGAAGTGGGCCAAGCCATaGACGGTCTCGGCACAGCGC | + |
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Preference number: 4 (lower is better) Translates to: PVLANGGRQRAGASFQWMKWAKP*TVSAQR Trigger: GCGCTGTGCCGAGACCGTGCATGGCTTGGCCCACTT...CATCCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| 3UTR CAA 72 bp | GAGGAAAGGCCCAGGGAGTTGACTGTAGCCCCGTCCTaGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: EERPRELTVAPS*LMEAGRGLEHL Trigger: AAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAACTCCCTGGGCCTTTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR GCA 90 bp | CCCAGGGAGTTGACTGTAGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGCAACTGTTCCAGATGTaGCTGCAGCTGGAGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: PRELTVAPSLLMEAGRGLQLFQM*LQLEEV Trigger: CACTTCCTCCAGCTGCAGGCACATCTGGAACAGTTG...CAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAACTCCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | CCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGATGAGGCCCAGCTCCCCCTaGGAAACTCTTACAGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: PVLANGGRQRAGASFQWMRPSSP*ETLTVP Trigger: CGGGACTGTAAGAGTTTCCCAGGGGGAGCTGGGCCT...CATCCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | GTTGACTGTAGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTCTCCGGTCAGGCTTCTaGAAACTGGTGGGCTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: VDCSPVLANGGRQRAGASLRSGF*KLVGLS Trigger: GGACAAGCCCACCAGTTTCCAGAAGCCTGACCGGAG...AGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR GCA 90 bp | AACCCTCCCCCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCCCTGGGTTTCATAGGTaGCGTCAAAGTCATCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: NPPPEPTHSPLHLYPSTPPGFHR*RQSHPG Trigger: TCCTGGATGACTTTGACGGCACCTATGAAACCCAGG...GGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGGGGGAGGGTT 58% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | AGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGCGCGGTAGATCCAATTaGAGCGAAGCCAGTGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: SPVLANGGRQRAGASFQWRGRSN*SEASGQ Trigger: CTGACCACTGGCTTCGCTCCAATTGGATCTACCGCG...CCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | CCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGATGAGAGTGTCAGGGAAGTaGGCCAAGCCATGCACGGTC | + |
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Preference number: 4 (lower is better) Translates to: PVLANGGRQRAGASFQWMRVSGK*AKPCTV Trigger: GACCGTGCATGGCTTGGCCCACTTCCCTGACACTCT...CATCCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | CCCAGGGAGTTGACTGTAGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGCTTCTGGAAACTGGTaGGCTTGTCCGAAACTCATG | + |
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Preference number: 4 (lower is better) Translates to: PRELTVAPSLLMEAGRGLASGNW*ACPKLM Trigger: CATGAGTTTCGGACAAGCCCACCAGTTTCCAGAAGC...CAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAACTCCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | CCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGATGGCTGGGTCCAGTTCCTaGGCAAAGTCTAAGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PVLANGGRQRAGASFQWMAGSSS*AKSKAP Trigger: GGGAGCCTTAGACTTTGCCCAGGAACTGGACCCAGC...CATCCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | CCCAGGGAGTTGACTGTAGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGTGTGGGTGGTTGAACTaGCCCATGATAGTTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PRELTVAPSLLMEAGRGLCGWLN*PMIVAS Trigger: AGAGGCAACTATCATGGGCCAGTTCAACCACCCACA...CAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAACTCCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR TCA 90 bp | CCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGATGAAAGGTCGTCGGAGCTaGATGCCCACATCCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PVLANGGRQRAGASFQWMKGRRS*MPTSWS Trigger: TGACCAGGATGTGGGCATTCAGCTCCGACGACCTTT...CATCCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR TCA 90 bp | GTTGACTGTAGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTACTCCCCTTCTCCTATaGCAGTGTCCACAATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VDCSPVLANGGRQRAGASTPLLL*QCPQSA Trigger: GGCTGATTGTGGACACTGTCATAGGAGAAGGGGAGT...AGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR GCA 90 bp | CCCAGGGAGTTGACTGTAGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAAGCTCTGGTCTGCTaGCACAGTTGTTACCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: PRELTVAPSLLMEAGRGLEALVC*HSCYLL Trigger: CAAAAGGTAACAACTGTGGCAGCAGACCAGAGCTTC...CAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAACTCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR GCA 90 bp | CCCAGGGAGTTGACTGTAGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGCTGGCCCATGATAGTTaGCTCTCGAAGGAAATTCCA | + |
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Preference number: 4 (lower is better) Translates to: PRELTVAPSLLMEAGRGLLAHDS*LSKEIP Trigger: TGGAATTTCCTTCGAGAGGCAACTATCATGGGCCAG...CAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAACTCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | AACCCTCCCCCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCCCCACCTTCCTGTATTaGGCAGTCTTGGTACATGTA | + |
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Preference number: 4 (lower is better) Translates to: NPPPEPTHSPLHLYPSTPPTFLY*AVLVHV Trigger: TACATGTACCAAGACTGCCCAATACAGGAAGGTGGG...GGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGGGGGAGGGTT 57% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | CCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGATGGAGAAGCTCAGATTTTaGGGAGCCGATGGGGGACGT | + |
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Preference number: 4 (lower is better) Translates to: PVLANGGRQRAGASFQWMEKLRF*GADGGR Trigger: ACGTCCCCCATCGGCTCCCCAAAATCTGAGCTTCTC...CATCCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | CCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCTTTATAAACCCAGCACACACTCCATaGTGTCCAGCCCAGCCGAAC | + |
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Preference number: 4 (lower is better) Translates to: PEPTHSPLHLYPSTPFINPAHTP*CPAQPN Trigger: GTTCGGCTGGGCTGGACACCATGGAGTGTGTGCTGG...GTTTATAAAGGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR TCA 90 bp | CCCAGGGAGTTGACTGTAGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGTATGTGGTATCTGGCTaGAGTTTTGTCAGCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: PRELTVAPSLLMEAGRGLYVVSG*SFVSKT Trigger: GGTCTTGCTGACAAAACTTCAGCCAGATACCACATA...CAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAACTCCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR TCA 90 bp | CCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGATGCCCAGCAGTTCTTCATaGGTTCATAGAGAGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PVLANGGRQRAGASFQWMPSSSS*VHREGQ Trigger: CTGCCCCTCTCTATGAACTCATGAAGAACTGCTGGG...CATCCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR GCA 90 bp | AAGGCTCCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAGCAGCTCCACGTAGATaGGTGAAGCTTCCTCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: KAPWFKGRVLIDWAGAAPAAPRR*VKLPLR Trigger: GCGGAGAGGAAGCTTCACGCATCTACGTGGAGCTGC...TGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGGAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR GCA 90 bp | AAGGCTCCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAGTGGTGCGTTCACGCTaGCTCTGCTGTCTCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: KAPWFKGRVLIDWAGAAPVVRSR*LCCLCL Trigger: GAGACAGAGACAGCAGAGGCAGCGTGAACGCACCAC...TGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGGAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | GCTCCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAATAACTCCACCCAGTCTCTaGGGGATCCAGAAGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: APWFKGRVLIDWAGAAPITPPSL*GIQKPA Trigger: GGCTGGCTTCTGGATCCCCCAGAGACTGGGTGGAGT...TATTGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | CCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCTTTATAAACTTGGAGCGAAGCCAGTaGTCAGTGTCCCCACCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PEPTHSPLHLYPSTPFINLERSQ*SVSPPS Trigger: GGAAGGTGGGGACACTGACCACTGGCTTCGCTCCAA...GTTTATAAAGGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | AGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGCTGATGGTGAAGCTCTaGTCTGCTGCCACAGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: SPVLANGGRQRAGASFQWLMVKL*SAATVV Trigger: AACAACTGTGGCAGCAGACCAGAGCTTCACCATCAG...CCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | AGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGTTGTCAGCAAGACCCTaGGTTCCAACACCATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SPVLANGGRQRAGASFQWLSARP*VPTPSG Trigger: ACCAGATGGTGTTGGAACCCAGGGTCTTGCTGACAA...CCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | CCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGATGCAGGCTTCTGGAAACTaGTGGGCTTGTCCGAAACTC | + |
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Preference number: 4 (lower is better) Translates to: PVLANGGRQRAGASFQWMQASGN*WACPKL Trigger: GAGTTTCGGACAAGCCCACCAGTTTCCAGAAGCCTG...CATCCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR TCA 90 bp | CCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCTTTATAAACCATTCGTGGTGTACCTaGGGACCCCAAGCTGATCTG | + |
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Preference number: 4 (lower is better) Translates to: PEPTHSPLHLYPSTPFINHSWCT*GPQADL Trigger: CAGATCAGCTTGGGGTCCTCAGGTACACCACGAATG...GTTTATAAAGGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR TCA 90 bp | GTTGACTGTAGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTGGAACTGTCCAGTCCTaGCACTCTGTTTTGGGATTT | + |
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Preference number: 4 (lower is better) Translates to: VDCSPVLANGGRQRAGASGTVQS*HSVLGF Trigger: AAATCCCAAAACAGAGTGTCAGGACTGGACAGTTCC...AGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR GCA 90 bp | GCTCCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAATACGTTCACGCTGCCTCTaGTGTCTCTGTCTCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: APWFKGRVLIDWAGAAPIRSRCL*CLCLWP Trigger: AGGCCAGAGACAGAGACAGCAGAGGCAGCGTGAACG...TATTGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR GCA 90 bp | AAGGCTCCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAGATCGACATTGGTGGTaGGTTCACGCTGCCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: KAPWFKGRVLIDWAGAAPDRHWW*VHAASA Trigger: AGCAGAGGCAGCGTGAACGCACCACCAATGTCGATC...TGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGGAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | TATGTAAGTGTATATATTAAACCCTCCCCCAGAACCCACCCACAGTCCCCTTCACCACGGCGGGTGAGGTaGCCCAACGAGCAGCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: YVSVYIKPSPRTHPQSPSPRRVR*PNEQRS Trigger: AGAACGCTGCTCGTTGGGCCACCTCACCCGCCGTGG...TGAAGGGGACTGTGGGTGGGTTCTGGGGGAGGGTTTAATATATACACTTACATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | TATGTAAGTGTATATATTAAACCCTCCCCCAGAACCCACCCACAGTCCCCTTCACGTGTGCATGCTACCTaGGGACCCTCCCCAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: YVSVYIKPSPRTHPQSPSRVHAT*GPSPGA Trigger: AGCCCCTGGGGAGGGTCCCCAGGTAGCATGCACACG...TGAAGGGGACTGTGGGTGGGTTCTGGGGGAGGGTTTAATATATACACTTACATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | CCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAATAGCCCTCGATCGACATTGGTaGTGCGTTCACGCTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PWFKGRVLIDWAGAAPIALDRHW*CVHAAS Trigger: AGAGGCAGCGTGAACGCACCACCAATGTCGATCGAG...GGCTATTGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | AAGGCTCCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAATGGGCAATAGCTTCTaGGGCTGTCCATCGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: KAPWFKGRVLIDWAGAAPMGNSF*GCPSDG Trigger: CCCATCCGATGGACAGCCCCAGAAGCTATTGCCCAT...TGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGGAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR TCA 90 bp | CCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCTTTATAAACTGCCATTCTTCGTCCTaGTTCAGCACGTGCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PEPTHSPLHLYPSTPFINCHSSS*FSTCSS Trigger: TGAGCTGCACGTGCTGAATCAGGACGAAGAATGGCA...GTTTATAAAGGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS-3UTR TCA 90 bp | CCCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCTTTATAAAGCAGCAATCCAAAGATaGCGGCCACAATCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRTHPQSPSLVPIHPLYKAAIQR*RPQSLL Trigger: GAGGAGAGATTGTGGCCGTCATCTTTGGATTGCTGC...TTTATAAAGGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS-3UTR GCA 90 bp | GCTCCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAATAACTCGCCATCAGGGCTaGAGTGCATTCGTGGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: APWFKGRVLIDWAGAAPITRHQG*SAFVVY Trigger: GTACACCACGAATGCACTGCAGCCCTGATGGCGAGT...TATTGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS-3UTR GCA 90 bp | AACCCTCCCCCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCGGTACCCATCTTCAATaGTTTTCATTACCTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NPPPEPTHSPLHLYPSTPGTHLQ*FSLPLG Trigger: ACCAAGAGGTAATGAAAAGCATTGAAGATGGGTACC...GGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGGGGGAGGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | CCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCTTTATAAACAAGCTGATCTGTGCATaGGAGAGGCACGTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PEPTHSPLHLYPSTPFINKLICA*ERHVPA Trigger: AGCTGGAACGTGCCTCTCCCATGCACAGATCAGCTT...GTTTATAAAGGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS-3UTR CCA 90 bp | CCCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCTTTATAAAACAGTCTTGCAATCTTaGCTGGGGAGTCTCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRTHPQSPSLVPIHPLYKTVLQS*LGSLRA Trigger: AGCCCTGAGACTCCCCAGCCAAGATTGCAAGACTGT...TTTATAAAGGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS-3UTR CCA 90 bp | CCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGATGCGTAGAATGTGTGGGTaGTTGAACTGGCCCATGATA | + |
|
Preference number: 4 (lower is better) Translates to: PVLANGGRQRAGASFQWMRRMCG*LNWPMI Trigger: TATCATGGGCCAGTTCAACCACCCACACATTCTACG...CATCCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR TCA 90 bp | CCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAATAGCCGGAGAGTTGAGTCCCTaGTGTGGAGAAGCTCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: PWFKGRVLIDWAGAAPIAGELSP*CGEAQI Trigger: AATCTGAGCTTCTCCACATCAGGGACTCAACTCTCC...GGCTATTGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS-3UTR GCA 90 bp | AAGGCTCCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAGGTGAAGCTCTGGTCTaGTGCCACAGTTGTTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KAPWFKGRVLIDWAGAAPGEALV*CHSCYL Trigger: AAGGTAACAACTGTGGCAGCAGACCAGAGCTTCACC...TGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGGAGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS-3UTR GCA 90 bp | CCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGATGCAAAGTCAGACACCTTaGAGCACAGGTTCTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: PVLANGGRQRAGASFQWMQSQTP*STGSDS Trigger: TGAATCAGAACCTGTGCTGCAAGGTGTCTGACTTTG...CATCCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | AAGGCTCCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCATCTGCTATGCTATGTTaGGGGCACTTGAGACAACGG | + |
|
Preference number: 4 (lower is better) Translates to: KAPWFKGRVLIDWAGAAPSAMLC*GHLRQR Trigger: CCGTTGTCTCAAGTGCCCCCAACATAGCATAGCAGA...TGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGGAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | GCATATGTAAGTGTATATATTAAACCCTCCCCCAGAACCCACCCACAGTCCCCTTCTTGCAATCTTGGCTaGGGAGTCTCAGGGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AYVSVYIKPSPRTHPQSPSCNLG*GVSGLP Trigger: GGGGAGCCCTGAGACTCCCCAGCCAAGATTGCAAGA...AGGGGACTGTGGGTGGGTTCTGGGGGAGGGTTTAATATATACACTTACATATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS-3UTR TCA 90 bp | CCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAATAGCCTATGTTGGGGGCACTTaGGACAACGGAGTGTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: PWFKGRVLIDWAGAAPIAYVGGT*DNGVYS Trigger: TGAATACACTCCGTTGTCTCAAGTGCCCCCAACATA...GGCTATTGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS-3UTR GCA 90 bp | CCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCTTTATAAACAGAATTCGTTTCTGGTaGCCTGGCAACGTTATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PEPTHSPLHLYPSTPFINRIRFW*PGNVIP Trigger: GGGAATAACGTTGCCAGGGCACCAGAAACGAATTCT...GTTTATAAAGGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS-3UTR CCA 90 bp | CCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCTTTATAAACGTTGAGTCCCTGATGTaGAGAAGCTCAGATTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PEPTHSPLHLYPSTPFINVESLM*RSSDFG Trigger: CCCAAAATCTGAGCTTCTCCACATCAGGGACTCAAC...GTTTATAAAGGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS-3UTR CCA 90 bp | AAGGCTCCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCACCACCAGTAGCCATCTaGGGATGTATCTTTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KAPWFKGRVLIDWAGAAPPPVAI*GCIFQG Trigger: ACCTTGAAAGATACATCCCCAGATGGCTACTGGTGG...TGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGGAGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR TCA 90 bp | CCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGATGCAGTCCTTAAATCCTTaGATACTGCAGAGAATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PVLANGGRQRAGASFQWMQSLNP*ILQRIR Trigger: ACGAATTCTCTGCAGTATTCAAGGATTTAAGGACTG...CATCCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR GCA 90 bp | TATGTAAGTGTATATATTAAACCCTCCCCCAGAACCCACCCACAGTCCCCTTCACCATCAGGGCTGCAGTaGATTCGTGGTGTACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YVSVYIKPSPRTHPQSPSPSGLQ*IRGVPE Trigger: CTCAGGTACACCACGAATGCACTGCAGCCCTGATGG...TGAAGGGGACTGTGGGTGGGTTCTGGGGGAGGGTTTAATATATACACTTACATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | CCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCTTTATAAACACAGTTGTTACCTTTTaGAACAAAGGTCGTCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PEPTHSPLHLYPSTPFINTVVTF*NKGRRS Trigger: GCTCCGACGACCTTTGTTCCAAAAGGTAACAACTGT...GTTTATAAAGGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | AGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGAATGTATGTGGTATCTaGCTGAAGTTTTGTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPVLANGGRQRAGASFQWNVCGI*LKFCQQ Trigger: TTGCTGACAAAACTTCAGCCAGATACCACATACATT...CCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | AAGGCTCCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAATTGTCCTTAGGGAATaGGGGTCAGTAAGCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KAPWFKGRVLIDWAGAAPIVLRE*GSVSNC Trigger: ACAGTTGCTTACTGACCCCCATTCCCTAAGGACAAT...TGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGGAGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR GCA 90 bp | TATGTAAGTGTATATATTAAACCCTCCCCCAGAACCCACCCACAGTCCCCTTCACAAGTCAGCTCCAGCTaGCTCGGTTCTTTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: YVSVYIKPSPRTHPQSPSQVSSS*LGSFFT Trigger: GGTGAAGAAAGAACCGAGGCAGCTGGAGCTGACTTG...TGAAGGGGACTGTGGGTGGGTTCTGGGGGAGGGTTTAATATATACACTTACATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | TATGTAAGTGTATATATTAAACCCTCCCCCAGAACCCACCCACAGTCCCCTTCACTTGTCCGAAACTCATaGTCAGGGGAGAAAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YVSVYIKPSPRTHPQSPSLVRNS*SGEKGP Trigger: TGGCCCTTTCTCCCCTGACCATGAGTTTCGGACAAG...TGAAGGGGACTGTGGGTGGGTTCTGGGGGAGGGTTTAATATATACACTTACATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR TCA 90 bp | GCATATGTAAGTGTATATATTAAACCCTCCCCCAGAACCCACCCACAGTCCCCTTTGCAGCACAGGTTCTaGTTCACCAAGATGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AYVSVYIKPSPRTHPQSPLQHRF*FTKMFL Trigger: CAGGAACATCTTGGTGAATCAGAACCTGTGCTGCAA...AGGGGACTGTGGGTGGGTTCTGGGGGAGGGTTTAATATATACACTTACATATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | TATGTAAGTGTATATATTAAACCCTCCCCCAGAACCCACCCACAGTCCCCTTCATCGTTTCTGGTGCCCTaGCAACGTTATTCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: YVSVYIKPSPRTHPQSPSSFLVP*QRYSHL Trigger: CAGATGGGAATAACGTTGCCAGGGCACCAGAAACGA...TGAAGGGGACTGTGGGTGGGTTCTGGGGGAGGGTTTAATATATACACTTACATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR GCA 90 bp | GCATATGTAAGTGTATATATTAAACCCTCCCCCAGAACCCACCCACAGTCCCCTATCCCACATTTCCACTaGTTTCTTCATAGCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AYVSVYIKPSPRTHPQSPIPHFH*FLHSQA Trigger: AGCCTGGCTATGAAGAAAGCAGTGGAAATGTGGGAT...AGGGGACTGTGGGTGGGTTCTGGGGGAGGGTTTAATATATACACTTACATATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CCA 90 bp | TATGTAAGTGTATATATTAAACCCTCCCCCAGAACCCACCCACAGTCCCCTTCAAGCGCTTCATGCGTATaGATTCAAGCCACTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YVSVYIKPSPRTHPQSPSSASCV*IQATQR Trigger: TCTCTGAGTGGCTTGAATCCATACGCATGAAGCGCT...TGAAGGGGACTGTGGGTGGGTTCTGGGGGAGGGTTTAATATATACACTTACATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CAA 90 bp | CCCAGGGAGTTGACTGTAGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGACCTTTTCCACAGGGTaGGCAGGGACCCCCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRELTVAPSLLMEAGRGLTFSTG*AGTPIL Trigger: CAGGATGGGGGTCCCTGCCAACCCTGTGGAAAAGGT...CAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAACTCCCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CAA 90 bp | AACCCTCCCCCAGAACCCACCCACAGTCCCCTTCACTTGTACCCATCCACCCCCTCTGCGTGCCCCATGTaGATACTGAGGGAGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NPPPEPTHSPLHLYPSTPSACPM*ILREAL Trigger: CAGCGCCTCCCTCAGTATCAACATGGGGCACGCAGA...GGGGGTGGATGGGTACAAGTGAAGGGGACTGTGGGTGGGTTCTGGGGGAGGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS CCA 90 bp | CCATCTGCGTCAGGTCCTCAGCCGTCAGCTCCAGCACACACTCCATaGTGTCCAGCCCAGCCGAACGGAAGTGCAGGATGTAGCGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSASGPQPSAPAHTP*CPAQPNGSAGCSAS Trigger: TGAAGCGCTACATCCTGCACTTCCGTTCGGCTGGGCTGGACACCATGGAGTGTGTGCTGGAGCTGACGGCTGAGGACCTGACGCAGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS GCA 90 bp | CCTCCAGGATTTCGGGGTCGGGACCCTGCCCAAGTCAGCTCCAGCTaGCTCGGTTCTTTCTTCACCAGCTTCAGTGACAGGCCAGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PPGFRGRDPAQVSSS*LGSFFTSFSDRPES Trigger: ACTCTCTGGCCTGTCACTGAAGCTGGTGAAGAAAGAACCGAGGCAGCTGGAGCTGACTTGGGCAGGGTCCCGACCCCGAAATCCTGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS TCA 90 bp | CACAGGAACCCGGGTTGTGGAAAGCTAAGTAGAGGCCACGGCGGGTaGGGTGGCCCAACGAGCAGCGTTCTACATTCAGCTTTACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HRNPGCGKLSRGHGG*GGPTSSVLHSALQS Trigger: GCTCTGTAAAGCTGAATGTAGAACGCTGCTCGTTGGGCCACCTCACCCGCCGTGGCCTCTACTTAGCTTTCCACAACCCGGGTTCCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS GCA 90 bp | GGGCAGTCTTGGTACATGTACAGGGGTGTCCCGTTTAGCATTTGTTaGACCTCACTCCACCCAGTCTCTGGGGGATCCAGAAGCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GQSWYMYRGVPFSIC*TSLHPVSGGSRSQP Trigger: GGGCTGGCTTCTGGATCCCCCAGAGACTGGGTGGAGTGAGGTGCAACAAATGCTAAACGGGACACCCCTGTACATGTACCAAGACTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS GCA 90 bp | CAGCTCATAGCTCAGATTCCCTCCAGGATTTCGGGGTCGGGACCCTaGCCAAGTCAGCTCCAGCTGCCTCGGTTCTTTCTTCACCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QLIAQIPSRISGSGP*PSQLQLPRFFLHQL Trigger: AAGCTGGTGAAGAAAGAACCGAGGCAGCTGGAGCTGACTTGGGCAGGGTCCCGACCCCGAAATCCTGGAGGGAATCTGAGCTATGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 90 bp | GCTCCACGTAGATGCGTGAAGCTTCCTCTCCGCGGTAGATCCAATTaGAGCGAAGCCAGTGGTCAGTGTCCCCACCTTCCTGTATTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: APRRCVKLPLRGRSN*SEASGQCPHLPVLG Trigger: GCCCAATACAGGAAGGTGGGGACACTGACCACTGGCTTCGCTCCAATTGGATCTACCGCGGAGAGGAAGCTTCACGCATCTACGTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS-3UTR CAA 90 bp | CCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGATGCACAGTCTTGCAATCTaGGCTGGGGAGTCTCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PVLANGGRQRAGASFQWMHSLAI*AGESQG Trigger: GCCCTGAGACTCCCCAGCCAAGATTGCAAGACTGTG...CATCCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS GCA 90 bp | TCTTTCTTCACCAGCTTCAGTGACAGGCCAGAGAGTGACTCTGCGTaGCCCATGTTGATACTGAGGGAGGCGCTGCTAGGGCTGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: SFFTSFSDRPESDSA*PMLILREALLGLEL Trigger: CAGTTCCAGCCCTAGCAGCGCCTCCCTCAGTATCAACATGGGGCACGCAGAGTCACTCTCTGGCCTGTCACTGAAGCTGGTGAAGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS GCA 90 bp | CTGCAGAGAATTCGTTTCTGGTGCCCTGGCAACGTTATTCCCATCTaGGTCAGGTCCTCAGCCGTCAGCTCCAGCACACACTCCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LQRIRFWCPGNVIPI*VRSSAVSSSTHSMV Trigger: CACCATGGAGTGTGTGCTGGAGCTGACGGCTGAGGACCTGACGCAGATGGGAATAACGTTGCCAGGGCACCAGAAACGAATTCTCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 90 bp | GCTTGTCCGAAACTCATGGTCAGGGGAGAAAGGGCCAGGCCCCAGTaGGGTCAGTGTTCGCACTCTGACAATGTATGTGGTATCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ACPKLMVRGERARPQ*GQCSHSDNVCGIWL Trigger: CAGCCAGATACCACATACATTGTCAGAGTGCGAACACTGACCCCACTGGGGCCTGGCCCTTTCTCCCCTGACCATGAGTTTCGGACAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGCTCTGCTATGCTATGTaGGGGGCACTTGAGACAACG | + |
|
Preference number: 5 (lower is better) Translates to: SPVLANGGRQRAGASFQWLCYAM*GALETT Trigger: CGTTGTCTCAAGTGCCCCCAACATAGCATAGCAGAG...CCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS-3UTR CAA 90 bp | AAGGCTCCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAGGAGAAGCTCAGATTTaGGGGAGCCGATGGGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: KAPWFKGRVLIDWAGAAPGEAQI*GSRWGT Trigger: CGTCCCCCATCGGCTCCCCAAAATCTGAGCTTCTCC...TGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGGAGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS-3UTR CAA 90 bp | GTTGACTGTAGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTCTGTATTGGGCAGTCTaGGTACATGTACAGGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VDCSPVLANGGRQRAGASLYWAV*VHVQGC Trigger: ACACCCCTGTACATGTACCAAGACTGCCCAATACAG...AGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS-3UTR CAA 90 bp | CCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGATGTGGAAACTGGTGGGCTaGTCCGAAACTCATGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PVLANGGRQRAGASFQWMWKLVG*SETHGQ Trigger: CTGACCATGAGTTTCGGACAAGCCCACCAGTTTCCA...CATCCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS-3UTR CAA 90 bp | AGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGGGTCAAAGTTGGCAATaGTCCTTAGGGAATGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPVLANGGRQRAGASFQWGQSWQ*SLGNGG Trigger: ACCCCCATTCCCTAAGGACAATTGCCAACTTTGACC...CCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS TCA 90 bp | AGGCAGTTCATGCCTGATGCTATGCCCAGTAGCATAGCCACTAGCTaGCCAGGAGCTAGTTGGTCCTCCCGTTCCTTCAGAAAGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RQFMPDAMPSSIATS*PGASWSSRSFRKAS Trigger: GGATGCCTTTCTGAAGGAACGGGAGGACCAACTAGCTCCTGGTCAGCTAGTGGCTATGCTACTGGGCATAGCATCAGGCATGAACTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
||
| CDS GCA 90 bp | TGGTGTCCAGCCCAGCCGAACGGAAGTGCAGGATGTAGCGCTTCATaGGTATGGATTCAAGCCACTCAGAGACACTTCGATAAGGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: WCPAQPNGSAGCSAS*VWIQATQRHFDKGS Trigger: GGATCCCTTATCGAAGTGTCTCTGAGTGGCTTGAATCCATACGCATGAAGCGCTACATCCTGCACTTCCGTTCGGCTGGGCTGGACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 90 bp | CCAGCCCAGCCGAACGGAAGTGCAGGATGTAGCGCTTCATGCGTATaGATTCAAGCCACTCAGAGACACTTCGATAAGGGATCCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: PAQPNGSAGCSASCV*IQATQRHFDKGSHQ Trigger: CTGATGGGATCCCTTATCGAAGTGTCTCTGAGTGGCTTGAATCCATACGCATGAAGCGCTACATCCTGCACTTCCGTTCGGCTGGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS-3UTR CAA 90 bp | AGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGCACAGTTGTTACCTTTaGGAACAAAGGTCGTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPVLANGGRQRAGASFQWHSCYL*EQRSSE Trigger: CTCCGACGACCTTTGTTCCAAAAGGTAACAACTGTG...CCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS TCA 90 bp | AGTGACAGGCCAGAGAGTGACTCTGGACACCCGGAACGACAAGGTTaGGTTCGGAAGGTAAGAAGGAATAACGTCAGCTGTAGCTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SDRPESDSGHPERQG*VRKVRRNNVSCSSA Trigger: AGCGGAGCTACAGCTGACGTTATTCCTTCTTACCTTCCGAACTCAACCTTGTCGTTCCGGGTGTCCAGAGTCACTCTCTGGCCTGTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204357.2 |
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| CDS CCA 90 bp | CGTAAGGTCACCCTAGGGTCAAAGTTGGCAATTGTCCTTAGGGAATaGGGGTCAGTAAGCAACTGTTCCAGATGTGCCTGCAGCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKVTLGSKLAIVLRE*GSVSNCSRCACSWR Trigger: CCTCCAGCTGCAGGCACATCTGGAACAGTTGCTTACTGACCCCCATTCCCTAAGGACAATTGCCAACTTTGACCCTAGGGTGACCTTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS-3UTR CAA 90 bp | CCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGGAGCATCTTTTCAGTGGATGACCCTAGGGTCAAAGTaGGCAATTGTCCTTAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PVLANGGRQRAGASFQWMTLGSK*AIVLRE Trigger: TTCCCTAAGGACAATTGCCAACTTTGACCCTAGGGT...CATCCACTGAAAAGATGCTCCAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CAA 90 bp | CCCAGGGAGTTGACTGTAGCCCCGTCCTTGCTAATGGAGGCAGGCAGAGGGCTGTCAGTCCTTAAATCCTaGAATACTGCAGAGAATTCG | + |
|
Preference number: 5 (lower is better) Translates to: PRELTVAPSLLMEAGRGLSVLKS*NTAENS Trigger: CGAATTCTCTGCAGTATTCAAGGATTTAAGGACTGA...CAGCCCTCTGCCTGCCTCCATTAGCAAGGACGGGGCTACAGTCAACTCCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CAA 90 bp | GCATATGTAAGTGTATATATTAAACCCTCCCCCAGAACCCACCCACAGTCCCCTCCAGCCCAGCTCTCCTaGTGCTGTGCTTGTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AYVSVYIKPSPRTHPQSPPAQLS*CCACVH Trigger: ATGGACACAAGCACAGCACAAGGAGAGCTGGGCTGG...AGGGGACTGTGGGTGGGTTCTGGGGGAGGGTTTAATATATACACTTACATATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS TCA 90 bp | GTTGATACTGAGGGAGGCGCTGCTAGGGCTGGAACTGTCCAGTCCTaGCACTCTGTTTTGGGATTTGACGGTAAATGTGTAGTTGGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: VDTEGGAARAGTVQS*HSVLGFDGKCVVGV Trigger: TACGCCAACTACACATTTACCGTCAAATCCCAAAACAGAGTGTCAGGACTGGACAGTTCCAGCCCTAGCAGCGCCTCCCTCAGTATCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS TCA 90 bp | AGTGGGGTCAGTGTTCGCACTCTGACAATGTATGTGGTATCTGGCTaGAGTTTTGTCAGCAAGACCCTGGGTTCCAACACCATCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGVSVRTLTMYVVSG*SFVSKTLGSNTIWC Trigger: GCACCAGATGGTGTTGGAACCCAGGGTCTTGCTGACAAAACTTCAGCCAGATACCACATACATTGTCAGAGTGCGAACACTGACCCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS TCA 90 bp | CATAAATCCCGATCAGCAGAGCTATTCCAAGCAGCAATCCAAAGATaGCGGCCACAATCTCTCCTCCGGTCAGGCTTCTGGAAACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HKSRSAELFQAAIQR*RPQSLLRSGFWKLV Trigger: CACCAGTTTCCAGAAGCCTGACCGGAGGAGAGATTGTGGCCGTCATCTTTGGATTGCTGCTTGGAATAGCTCTGCTGATCGGGATTTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 90 bp | TTCAGCTTTACAGAGCCAGATGCCAGGTCTCTGATGGTGAAGCTCTaGTCTGCTGCCACAGTTGTTACCTTTTGGAACAAAGGTCGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: FSFTEPDARSLMVKL*SAATVVTFWNKGRR Trigger: CCGACGACCTTTGTTCCAAAAGGTAACAACTGTGGCAGCAGACCAGAGCTTCACCATCAGAGACCTGGCATCTGGCTCTGTAAAGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 90 bp | GTCCTTAAATCCTTGAATACTGCAGAGAATTCGTTTCTGGTGCCCTaGCAACGTTATTCCCATCTGCGTCAGGTCCTCAGCCGTCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLKSLNTAENSFLVP*QRYSHLRQVLSRQL Trigger: GAGCTGACGGCTGAGGACCTGACGCAGATGGGAATAACGTTGCCAGGGCACCAGAAACGAATTCTCTGCAGTATTCAAGGATTTAAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS-3UTR CAA 90 bp | AAGGCTCCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAGGTCTGCTGCCACAGTaGTTACCTTTTGGAACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KAPWFKGRVLIDWAGAAPGLLPQ*LPFGTK Trigger: CTTTGTTCCAAAAGGTAACAACTGTGGCAGCAGACC...TGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGGAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS-3UTR CAA 90 bp | GCTCCTTGGTTCAAAGGCAGAGTTCTGATTGACTGGGCAGGAGCAGCACCAATATTAATGGCCACAGTCTaGCAATCTTGGCTGGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: APWFKGRVLIDWAGAAPILMATV*QSWLGS Trigger: ACTCCCCAGCCAAGATTGCAAGACTGTGGCCATTAA...TATTGGTGCTGCTCCTGCCCAGTCAATCAGAACTCTGCCTTTGAACCAAGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS GCA 90 bp | ATAATGTCCATTCTCACAGGTACAGATGGTAGACCCCTCAGACTCTaGTATGCTATGTTGGGGGCACTTGAGACAACGGAGTGTATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IMSILTGTDGRPLRL*YAMLGALETTECIH Trigger: ATGAATACACTCCGTTGTCTCAAGTGCCCCCAACATAGCATAGCAGAGTCTGAGGGGTCTACCATCTGTACCTGTGAGAATGGACATTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 72 bp | TCAGGTCCTCAGCCGTCAGCTCCAGCACACACTCCATaGTGTCCAGCCCAGCCGAACGGAAGTGCAGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: SGPQPSAPAHTP*CPAQPNGSAGC Trigger: ACATCCTGCACTTCCGTTCGGCTGGGCTGGACACCATGGAGTGTGTGCTGGAGCTGACGGCTGAGGACCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS TCA 72 bp | CCGGGTTGTGGAAAGCTAAGTAGAGGCCACGGCGGGTaGGGTGGCCCAACGAGCAGCGTTCTACATTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGCGKLSRGHGG*GGPTSSVLHSA Trigger: AGCTGAATGTAGAACGCTGCTCGTTGGGCCACCTCACCCGCCGTGGCCTCTACTTAGCTTTCCACAACCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS GCA 72 bp | GCTCAGATTCCCTCCAGGATTTCGGGGTCGGGACCCTaGCCAAGTCAGCTCCAGCTGCCTCGGTTCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AQIPSRISGSGP*PSQLQLPRFFL Trigger: AAGAAAGAACCGAGGCAGCTGGAGCTGACTTGGGCAGGGTCCCGACCCCGAAATCCTGGAGGGAATCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS GCA 72 bp | TCACTCAGCCCTATGGTCTTAGGTGCCTCACCTGCGTaGCCCATGTTGATACTGAGGGAGGCGCTGCTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLSPMVLGASPA*PMLILREALLG Trigger: CCCTAGCAGCGCCTCCCTCAGTATCAACATGGGGCACGCAGGTGAGGCACCTAAGACCATAGGGCTGAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204357.2 |
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| CDS GCA 72 bp | CCCATCACTCAGCCCTATGGTCTTAGGTGCCTCACCTaGGTGCCCCATGTTGATACTGAGGGAGGCGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PITQPYGLRCLT*VPHVDTEGGAA Trigger: AGCAGCGCCTCCCTCAGTATCAACATGGGGCACGCAGGTGAGGCACCTAAGACCATAGGGCTGAGTGATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204357.2 |
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| CDS CAA 72 bp | AGTGACAGGCCAGAGAGTGACTCTGCGTGCCCCATGTaGATACTGAGGGAGGCGCTGCTAGGGCTGGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: SDRPESDSACPM*ILREALLGLEL Trigger: CAGTTCCAGCCCTAGCAGCGCCTCCCTCAGTATCAACATGGGGCACGCAGAGTCACTCTCTGGCCTGTCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS CAA 72 bp | CCTATGGTCTTAGGTGCCTCACCTGCGTGCCCCATGTaGATACTGAGGGAGGCGCTGCTAGGGCTGGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: PMVLGASPACPM*ILREALLGLEL Trigger: CAGTTCCAGCCCTAGCAGCGCCTCCCTCAGTATCAACATGGGGCACGCAGGTGAGGCACCTAAGACCATAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204357.2 |
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| CDS CAA 72 bp | AAATGTGTAGTTGGCGTAAGGCTCGAGGCCTTGCACTaGCACGGTAGATGTGGTGAGCCCGGAAGCAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: KCVVGVRLEALH*HGRCGEPGSSR Trigger: CCGGCTGCTTCCGGGCTCACCACATCTACCGTGCAAGTGCAAGGCCTCGAGCCTTACGCCAACTACACATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CAA 72 bp | TCTCTCCTCCGGTCAGGCTTCTGGAAACTGGTGGGCTaGTCCGAAACTCATGGTCAGGGGAGAAAGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLLRSGFWKLVG*SETHGQGRKGQ Trigger: CTGGCCCTTTCTCCCCTGACCATGAGTTTCGGACAAGCCCACCAGTTTCCAGAAGCCTGACCGGAGGAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CAA 90 bp | TTGGGATTTGACGGTAAATGTGTAGTTGGCGTAAGGCTCGAGGCCTaGCACTTGCACGGTAGATGTGGTGAGCCCGGAAGCAGCCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGFDGKCVVGVRLEA*HLHGRCGEPGSSRG Trigger: TCCCCGGCTGCTTCCGGGCTCACCACATCTACCGTGCAAGTGCAAGGCCTCGAGCCTTACGCCAACTACACATTTACCGTCAAATCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS TCA 72 bp | GTCGACGGGCACGATCGTAAGCCCAGCAGTTCTTCATaGGTTCATAGAGAGGGGCAGGACAGTCCACAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VDGHDRKPSSSS*VHREGQDSPQE Trigger: CTCCTGTGGACTGTCCTGCCCCTCTCTATGAACTCATGAAGAACTGCTGGGCTTACGATCGTGCCCGTCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS GCA 72 bp | ATTCGTTTCTGGTGCCCTGGCAACGTTATTCCCATCTaGGTCAGGTCCTCAGCCGTCAGCTCCAGCACACAC | + |
|
Preference number: 6 (lower is better) Translates to: IRFWCPGNVIPI*VRSSAVSSSTH Trigger: GTGTGTGCTGGAGCTGACGGCTGAGGACCTGACGCAGATGGGAATAACGTTGCCAGGGCACCAGAAACGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 72 bp | AGATGCGTGAAGCTTCCTCTCCGCGGTAGATCCAATTaGAGCGAAGCCAGTGGTCAGTGTCCCCACCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RCVKLPLRGRSN*SEASGQCPHLP Trigger: AGGAAGGTGGGGACACTGACCACTGGCTTCGCTCCAATTGGATCTACCGCGGAGAGGAAGCTTCACGCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 72 bp | CGTGGTGTACCTGAGGACCCCAAGCTGATCTGTGCATaGGAGAGGCACGTTCCAGCTACTTCAACCAACCCT | + |
|
Preference number: 6 (lower is better) Translates to: RGVPEDPKLICA*ERHVPATSTNP Trigger: AGGGTTGGTTGAAGTAGCTGGAACGTGCCTCTCCCATGCACAGATCAGCTTGGGGTCCTCAGGTACACCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CAA 72 bp | GACGGTAAATGTGTAGTTGGCGTAAGGCTCGAGGCCTaGCACTTGCACGGTAGATGTGGTGAGCCCGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: DGKCVVGVRLEA*HLHGRCGEPGS Trigger: GCTTCCGGGCTCACCACATCTACCGTGCAAGTGCAAGGCCTCGAGCCTTACGCCAACTACACATTTACCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CAA 90 bp | TTTGACGGTAAATGTGTAGTTGGCGTAAGGCTCGAGGCCTTGCACTaGCACGGTAGATGTGGTGAGCCCGGAAGCAGCCGGGGAAAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: FDGKCVVGVRLEALH*HGRCGEPGSSRGKV Trigger: CACTTTTCCCCGGCTGCTTCCGGGCTCACCACATCTACCGTGCAAGTGCAAGGCCTCGAGCCTTACGCCAACTACACATTTACCGTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CAA 90 bp | GAGCCACTCAGGCTGGGCAGGCGTAAGGTCACCCTAGGGTCAAAGTaGGCAATTGTCCTTAGGGAATGGGGGTCAGTAAGCAACTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: EPLRLGRRKVTLGSK*AIVLREWGSVSNCS Trigger: GGAACAGTTGCTTACTGACCCCCATTCCCTAAGGACAATTGCCAACTTTGACCCTAGGGTGACCTTACGCCTGCCCAGCCTGAGTGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS TCA 72 bp | TGCAGTGCATTCGTGGTGTACCTGAGGACCCCAAGCTaGTCTGTGCATGGGAGAGGCACGTTCCAGCTACTT | + |
|
Preference number: 6 (lower is better) Translates to: CSAFVVYLRTPS*SVHGRGTFQLL Trigger: AAGTAGCTGGAACGTGCCTCTCCCATGCACAGATCAGCTTGGGGTCCTCAGGTACACCACGAATGCACTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS GCA 72 bp | ATCGGATGGGGATCTTTCCTCCCTGGGTTTCATAGGTaGCGTCAAAGTCATCCAGGAGGCGGGTCAAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: IGWGSFLPGFHR*RQSHPGGGSSQ Trigger: TTGGCTTGACCCGCCTCCTGGATGACTTTGACGGCACCTATGAAACCCAGGGAGGAAAGATCCCCATCCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS CCA 72 bp | AAACTCATGGTCAGGGGAGAAAGGGCCAGGCCCCAGTaGGGTCAGTGTTCGCACTCTGACAATGTATGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: KLMVRGERARPQ*GQCSHSDNVCG Trigger: ACCACATACATTGTCAGAGTGCGAACACTGACCCCACTGGGGCCTGGCCCTTTCTCCCCTGACCATGAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CAA 72 bp | AGGCTGGGCAGGCGTAAGGTCACCCTAGGGTCAAAGTaGGCAATTGTCCTTAGGGAATGGGGGTCAGTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RLGRRKVTLGSK*AIVLREWGSVS Trigger: GCTTACTGACCCCCATTCCCTAAGGACAATTGCCAACTTTGACCCTAGGGTGACCTTACGCCTGCCCAGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS TCA 72 bp | CGATCAGCAGAGCTATTCCAAGCAGCAATCCAAAGATaGCGGCCACAATCTCTCCTCCGGTCAGGCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSAELFQAAIQR*RPQSLLRSGFW Trigger: CCAGAAGCCTGACCGGAGGAGAGATTGTGGCCGTCATCTTTGGATTGCTGCTTGGAATAGCTCTGCTGATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS TCA 72 bp | CTCCCCGATACACTTCACCAAACTCCCCTTCTCCTATaGCAGTGTCCACAATCAGCCAGGCTGGGTCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LPDTLHQTPLLL*QCPQSARLGPV Trigger: AACTGGACCCAGCCTGGCTGATTGTGGACACTGTCATAGGAGAAGGGGAGTTTGGTGAAGTGTATCGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS TCA 72 bp | ATGCCTGATGCTATGCCCAGTAGCATAGCCACTAGCTaGCCAGGAGCTAGTTGGTCCTCCCGTTCCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: MPDAMPSSIATS*PGASWSSRSFR Trigger: TCTGAAGGAACGGGAGGACCAACTAGCTCCTGGTCAGCTAGTGGCTATGCTACTGGGCATAGCATCAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073387.5 |
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| CDS GCA 72 bp | TGGTACATGTACAGGGGTGTCCCGTTTAGCATTTGTTaGACCTCACTCCACCCAGTCTCTGGGGGATCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WYMYRGVPFSIC*TSLHPVSGGSR Trigger: TCTGGATCCCCCAGAGACTGGGTGGAGTGAGGTGCAACAAATGCTAAACGGGACACCCCTGTACATGTACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS GCA 72 bp | AGAAGGAATAACGTCAGCTGTAGCTCCGCTGCTTCCTaGCCATCACTCAGCCCTATGGTCTTAGGTGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRNNVSCSSAAS*PSLSPMVLGAS Trigger: TGAGGCACCTAAGACCATAGGGCTGAGTGATGGGCAGGAAGCAGCGGAGCTACAGCTGACGTTATTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204357.2 |
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| CDS CCA 72 bp | GTTTTAGCCACAGCTTGTCCTCTCGATCGACATTGGTaGTGCGTTCACGCTGCCTCTGCTGTCTCTGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VLATACPLDRHW*CVHAASAVSVS Trigger: AGAGACAGAGACAGCAGAGGCAGCGTGAACGCACCACCAATGTCGATCGAGAGGACAAGCTGTGGCTAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS GCA 72 bp | GCCAGATGCCAGGTCTCTGATGGTGAAGCTCTGGTCTaGTGCCACAGTTGTTACCTTTTGGAACAAAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: ARCQVSDGEALV*CHSCYLLEQRS Trigger: CGACCTTTGTTCCAAAAGGTAACAACTGTGGCAGCAGACCAGAGCTTCACCATCAGAGACCTGGCATCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CAA 90 bp | TCCAATTGGAGCGAAGCCAGTGGTCAGTGTCCCCACCTTCCTGTATaGGGCAGTCTTGGTACATGTACAGGGGTGTCCCGTTTAGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: SNWSEASGQCPHLPV*GSLGTCTGVSRLAF Trigger: AAATGCTAAACGGGACACCCCTGTACATGTACCAAGACTGCCCAATACAGGAAGGTGGGGACACTGACCACTGGCTTCGCTCCAATTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS GCA 72 bp | AGATGCCAGGTCTCTGATGGTGAAGCTCTGGTCTGCTaGCACAGTTGTTACCTTTTGGAACAAAGGTCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: RCQVSDGEALVC*HSCYLLEQRSS Trigger: CGACGACCTTTGTTCCAAAAGGTAACAACTGTGGCAGCAGACCAGAGCTTCACCATCAGAGACCTGGCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS GCA 72 bp | ATTCTCACAGGTACAGATGGTAGACCCCTCAGACTCTaGTATGCTATGTTGGGGGCACTTGAGACAACGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ILTGTDGRPLRL*YAMLGALETTE Trigger: CTCCGTTGTCTCAAGTGCCCCCAACATAGCATAGCAGAGTCTGAGGGGTCTACCATCTGTACCTGTGAGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 72 bp | CAGATGGTAGACCCCTCAGACTCTGCTATGCTATGTTaGGGGCACTTGAGACAACGGAGTGTATTCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: QMVDPSDSAMLC*GHLRQRSVFMS Trigger: GGACATGAATACACTCCGTTGTCTCAAGTGCCCCCAACATAGCATAGCAGAGTCTGAGGGGTCTACCATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 72 bp | TCTTTCAAGGTCTTAATGGCCACAGTCTTGCAATCTTaGCTGGGGAGTCTCAGGGCTCCCCGATACACTTCA | + |
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Preference number: 6 (lower is better) Translates to: SFKVLMATVLQS*LGSLRAPRYTS Trigger: TGAAGTGTATCGGGGAGCCCTGAGACTCCCCAGCCAAGATTGCAAGACTGTGGCCATTAAGACCTTGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 72 bp | ACCCTAGGGTCAAAGTTGGCAATTGTCCTTAGGGAATaGGGGTCAGTAAGCAACTGTTCCAGATGTGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: TLGSKLAIVLRE*GSVSNCSRCAC Trigger: GCAGGCACATCTGGAACAGTTGCTTACTGACCCCCATTCCCTAAGGACAATTGCCAACTTTGACCCTAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 72 bp | CCGAACGGAAGTGCAGGATGTAGCGCTTCATGCGTATaGATTCAAGCCACTCAGAGACACTTCGATAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: PNGSAGCSASCV*IQATQRHFDKG Trigger: TCCCTTATCGAAGTGTCTCTGAGTGGCTTGAATCCATACGCATGAAGCGCTACATCCTGCACTTCCGTTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 72 bp | TCCTTGAATACTGCAGAGAATTCGTTTCTGGTGCCCTaGCAACGTTATTCCCATCTGCGTCAGGTCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SLNTAENSFLVP*QRYSHLRQVLS Trigger: GCTGAGGACCTGACGCAGATGGGAATAACGTTGCCAGGGCACCAGAAACGAATTCTCTGCAGTATTCAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CAA 72 bp | ATCTTTCAAGGTCTTAATGGCCACAGTCTTGCAATCTaGGCTGGGGAGTCTCAGGGCTCCCCGATACACTTC | + |
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Preference number: 6 (lower is better) Translates to: IFQGLNGHSLAI*AGESQGSPIHF Trigger: GAAGTGTATCGGGGAGCCCTGAGACTCCCCAGCCAAGATTGCAAGACTGTGGCCATTAAGACCTTGAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CAA 90 bp | CTCACAGGTACAGATGGTAGACCCCTCAGACTCTGCTATGCTATGTaGGGGGCACTTGAGACAACGGAGTGTATTCATGTCCACTCGATA | + |
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Preference number: 6 (lower is better) Translates to: LTGTDGRPLRLCYAM*GALETTECIHVHSI Trigger: TATCGAGTGGACATGAATACACTCCGTTGTCTCAAGTGCCCCCAACATAGCATAGCAGAGTCTGAGGGGTCTACCATCTGTACCTGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS TCA 72 bp | ACCCCTCAGACTCTGCTATGCTATGTTGGGGGCACTTaGGACAACGGAGTGTATTCATGTCCACTCGATAGA | + |
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Preference number: 6 (lower is better) Translates to: TPQTLLCYVGGT*DNGVYSCPLDR Trigger: TCTATCGAGTGGACATGAATACACTCCGTTGTCTCAAGTGCCCCCAACATAGCATAGCAGAGTCTGAGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 72 bp | ACAGAGCCAGATGCCAGGTCTCTGATGGTGAAGCTCTaGTCTGCTGCCACAGTTGTTACCTTTTGGAACAAA | + |
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Preference number: 6 (lower is better) Translates to: TEPDARSLMVKL*SAATVVTFWNK Trigger: TTTGTTCCAAAAGGTAACAACTGTGGCAGCAGACCAGAGCTTCACCATCAGAGACCTGGCATCTGGCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 72 bp | ATGTGGTATCTGGCTGAAGTTTTGTCAGCAAGACCCTaGGTTCCAACACCATCTGGTGCCATTCTTCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: MWYLAEVLSARP*VPTPSGAILRP Trigger: AGGACGAAGAATGGCACCAGATGGTGTTGGAACCCAGGGTCTTGCTGACAAAACTTCAGCCAGATACCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CAA 72 bp | ACAGATGGTAGACCCCTCAGACTCTGCTATGCTATGTaGGGGGCACTTGAGACAACGGAGTGTATTCATGTC | + |
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Preference number: 6 (lower is better) Translates to: TDGRPLRLCYAM*GALETTECIHV Trigger: GACATGAATACACTCCGTTGTCTCAAGTGCCCCCAACATAGCATAGCAGAGTCTGAGGGGTCTACCATCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS TCA 72 bp | AGTGTTCGCACTCTGACAATGTATGTGGTATCTGGCTaGAGTTTTGTCAGCAAGACCCTGGGTTCCAACACC | + |
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Preference number: 6 (lower is better) Translates to: SVRTLTMYVVSG*SFVSKTLGSNT Trigger: GGTGTTGGAACCCAGGGTCTTGCTGACAAAACTTCAGCCAGATACCACATACATTGTCAGAGTGCGAACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS CCA 72 bp | GGTCAGTGTTCGCACTCTGACAATGTATGTGGTATCTaGCTGAAGTTTTGTCAGCAAGACCCTGGGTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: GQCSHSDNVCGI*LKFCQQDPGFQ Trigger: TTGGAACCCAGGGTCTTGCTGACAAAACTTCAGCCAGATACCACATACATTGTCAGAGTGCGAACACTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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| CDS GCA 72 bp | TTGTTACCTTTTGGAACAAAGGTCGTCGGAGCTGAATaGCCACATCCTGGTCACTCTCCATGTAGAAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: LLPFGTKVVGAE*PHPGHSPCRKG Trigger: ACCTTTTCTACATGGAGAGTGACCAGGATGTGGGCATTCAGCTCCGACGACCTTTGTTCCAAAAGGTAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073387.5 ENSMUST00000204357.2 |
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