RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPB41L4B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028434

Ensembl transcript IDs: ENSMUST00000030142.4, ENSMUST00000044022.5, ENSMUST00000095076.10

Found 295 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGACCTGGGCGAACAGAGCACACATCTGTATGTCGTGCCGCAGTaGGCACACCACCGAGCCCGAGGAAAGGAAGCGGACGAAGGCACC +
Preference number: 1 (lower is better)
Translates to: GDLGEQSTHLYVVPQ*AHHRARGKEADEGT
Trigger: GGTGCCTTCGTCCGCTTCCTTTCCTCGGGCTCGGTGGTGTGCTCACTGCGGCACGACATACAGATGTGTGCTCTGTTCGCCCAGGTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR GCA 90 bp CTAACCCTGGAGACCTGGGCGAACAGAGCACACATCTGTATGTCGTaGCGCAGTGAGCACACCACCGAGCCCGAGGAAAGGAAGCGGACG +
Preference number: 1 (lower is better)
Translates to: LTLETWANRAHICMS*RSEHTTEPEERKRT
Trigger: CGTCCGCTTCCTTTCCTCGGGCTCGGTGGTGTGCTCACTGCGGCACGACATACAGATGTGTGCTCTGTTCGCCCAGGTCTCCAGGGTTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR TCA 90 bp GTTTGTGCTCAGGTTTGCAGGGATGTCCACCCACTGAGACTCTTGTaGGCCCAAGGGAGAGGTGGGGGACAAGGTAGGAGCTTGCAAGCC +
Preference number: 1 (lower is better)
Translates to: VCAQVCRDVHPLRLL*AQGRGGGQGRSLQA
Trigger: GGCTTGCAAGCTCCTACCTTGTCCCCCACCTCTCCCTTGGGCTCACAAGAGTCTCAGTGGGTGGACATCCCTGCAAACCTGAGCACAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR CCA 90 bp CAACAAAGTCAAGCCGGAAGCTGGCTTCCGCTAACCCTGGAGACCTaGGCGAACAGAGCACACATCTGTATGTCGTGCCGCAGTGAGCAC +
Preference number: 1 (lower is better)
Translates to: QQSQAGSWLPLTLET*ANRAHICMSCRSEH
Trigger: GTGCTCACTGCGGCACGACATACAGATGTGTGCTCTGTTCGCCCAGGTCTCCAGGGTTAGCGGAAGCCAGCTTCCGGCTTGACTTTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR TCA 90 bp GCAACCAGCATGTTTGTGCTCAGGTTTGCAGGGATGTCCACCCACTaGGACTCTTGTGAGCCCAAGGGAGAGGTGGGGGACAAGGTAGGA +
Preference number: 1 (lower is better)
Translates to: ATSMFVLRFAGMSTH*DSCEPKGEVGDKVG
Trigger: TCCTACCTTGTCCCCCACCTCTCCCTTGGGCTCACAAGAGTCTCAGTGGGTGGACATCCCTGCAAACCTGAGCACAAACATGCTGGTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR GCA 90 bp GGGGCATATGCATCCCTCTGTGCAACACAGTGCTTTGGCACGACCTaGAGAAACCCGGCAGGCTCTCCTGTGATCCCCCACTATATCTCA +
Preference number: 1 (lower is better)
Translates to: GAYASLCATQCFGTT*RNPAGSPVIPHYIS
Trigger: TGAGATATAGTGGGGGATCACAGGAGAGCCTGCCGGGTTTCTGCAGGTCGTGCCAAAGCACTGTGTTGCACAGAGGGATGCATATGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR GCA 90 bp CCGGCAGGCTCTCCTGTGATCCCCCACTATATCTCAACTGCATGCTaGTGGTCAAAGGAGTTAAGTCTAGGATGGAACCCAGCCTCTACG +
Preference number: 1 (lower is better)
Translates to: PAGSPVIPHYISTAC*WSKELSLGWNPAST
Trigger: CGTAGAGGCTGGGTTCCATCCTAGACTTAACTCCTTTGACCAGCAGCATGCAGTTGAGATATAGTGGGGGATCACAGGAGAGCCTGCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR GCA 90 bp AACCCGGCAGGCTCTCCTGTGATCCCCCACTATATCTCAACTGCATaGTGCTGGTCAAAGGAGTTAAGTCTAGGATGGAACCCAGCCTCT +
Preference number: 1 (lower is better)
Translates to: NPAGSPVIPHYISTA*CWSKELSLGWNPAS
Trigger: AGAGGCTGGGTTCCATCCTAGACTTAACTCCTTTGACCAGCAGCATGCAGTTGAGATATAGTGGGGGATCACAGGAGAGCCTGCCGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR GCA 90 bp CAGAAACCCGGCAGGCTCTCCTGTGATCCCCCACTATATCTCAACTaGATGCTGCTGGTCAAAGGAGTTAAGTCTAGGATGGAACCCAGC +
Preference number: 1 (lower is better)
Translates to: QKPGRLSCDPPLYLN*MLLVKGVKSRMEPS
Trigger: GCTGGGTTCCATCCTAGACTTAACTCCTTTGACCAGCAGCATGCAGTTGAGATATAGTGGGGGATCACAGGAGAGCCTGCCGGGTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR GCA 90 bp AGGGATGTCAGCGCTGAGCACAGCTATGTCAAAACAGCTTATCTGTaGGCAGGGAGAACTTTACAGCGAGCTGTGGGTAGGGGCTCCTTA +
Preference number: 1 (lower is better)
Translates to: RDVSAEHSYVKTAYL*AGRTLQRAVGRGSL
Trigger: TAAGGAGCCCCTACCCACAGCTCGCTGTAAAGTTCTCCCTGCGCACAGATAAGCTGTTTTGACATAGCTGTGCTCAGCGCTGACATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR CCA 90 bp GCAGGCTCTCCTGTGATCCCCCACTATATCTCAACTGCATGCTGCTaGTCAAAGGAGTTAAGTCTAGGATGGAACCCAGCCTCTACGCTG +
Preference number: 1 (lower is better)
Translates to: AGSPVIPHYISTACC*SKELSLGWNPASTL
Trigger: CAGCGTAGAGGCTGGGTTCCATCCTAGACTTAACTCCTTTGACCAGCAGCATGCAGTTGAGATATAGTGGGGGATCACAGGAGAGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR CCA 90 bp CTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATaGTTTGTGTCACGTGCACATGATAGAGGACAGCCAAAGCCATTT +
Preference number: 1 (lower is better)
Translates to: LLGWQEVTTLCSIGT*FVSRAHDRGQPKPF
Trigger: AAATGGCTTTGGCTGTCCTCTATCATGTGCACGTGACACAAACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR GCA 90 bp GACACGAAAAGCACTAATGACACTTGTACAAAAACATTCATGCGATaGCAGGACGCTCCTCATGGAATGCAAAGGCACCATGGTGGTGAC +
Preference number: 1 (lower is better)
Translates to: DTKSTNDTCTKTFMR*QDAPHGMQRHHGGD
Trigger: GTCACCACCATGGTGCCTTTGCATTCCATGAGGAGCGTCCTGGCATCGCATGAATGTTTTTGTACAAGTGTCATTAGTGCTTTTCGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR GCA 90 bp ACAGGGACACGAAAAGCACTAATGACACTTGTACAAAAACATTCATaGGATGCCAGGACGCTCCTCATGGAATGCAAAGGCACCATGGTG +
Preference number: 1 (lower is better)
Translates to: TGTRKALMTLVQKHS*DARTLLMECKGTMV
Trigger: CACCATGGTGCCTTTGCATTCCATGAGGAGCGTCCTGGCATCGCATGAATGTTTTTGTACAAGTGTCATTAGTGCTTTTCGTGTCCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR CCA 90 bp CCTTCCTGTGCTCTTTGGGAAAATAACATTCCTGATGCACCCTGGTaGGAATTTCTGAAGACCAAAGGCTTCCTTTCTCACACCCAAAGA +
Preference number: 1 (lower is better)
Translates to: PSCALWENNIPDAPW*EFLKTKGFLSHTQR
Trigger: TCTTTGGGTGTGAGAAAGGAAGCCTTTGGTCTTCAGAAATTCCCACCAGGGTGCATCAGGAATGTTATTTTCCCAAAGAGCACAGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR TCA 90 bp TATGGGGAGTTAGTCTGGATGCATGCTCTCACCCCAAATGAGAAGTaGAATCTTAACAGATCACAGAATAGAAGACCTTGGAGATCACTT +
Preference number: 1 (lower is better)
Translates to: YGELVWMHALTPNEK*NLNRSQNRRPWRSL
Trigger: AAGTGATCTCCAAGGTCTTCTATTCTGTGATCTGTTAAGATTTCACTTCTCATTTGGGGTGAGAGCATGCATCCAGACTAACTCCCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR CCA 90 bp AGAGCTATAAAATACTTCATGCTCTCTGACCTTGTAATCCCTCTTTaGAGATATTCCGGAGGGAATAATCCAAGAGAAGGATTTTATAGA +
Preference number: 1 (lower is better)
Translates to: RAIKYFMLSDLVIPL*RYSGGNNPREGFYR
Trigger: TCTATAAAATCCTTCTCTTGGATTATTCCCTCCGGAATATCTCCAAAGAGGGATTACAAGGTCAGAGAGCATGAAGTATTTTATAGCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR-3UTR GCA 90 bp GCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTCGGACGAAGGCACCATaGCATCTCCAGGCAGCAAGG +
Preference number: 2 (lower is better)
Translates to: AAAGLAGGDNPVFYRNMVRTKAP*HLQAAR
Trigger: CCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCG...AACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR-3UTR TCA 90 bp AAGGTAATAATTGCACAACTCCTTATAGTCACTGTGAGCTCCCCCAGGGCAGCTCTGGAGGCTTCCATCTaGGAGCAAGGGGGAGGAGTG +
Preference number: 2 (lower is better)
Translates to: KVIIAQLLIVTVSSPRAALEASI*EQGGGV
Trigger: CACTCCTCCCCCTTGCTCTCAGATGGAAGCCTCCAG...AGCTGCCCTGGGGGAGCTCACAGTGACTATAAGGAGTTGTGCAATTATTACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR-3UTR GCA 90 bp CATGCTGTACAGTCCCAGCTCTGTAATGATCATGTTAGCAGACTCTCTCCTCTCCCCCCAGGGCAGCTTTaGTGTCTCAGCACCCACCAT +
Preference number: 2 (lower is better)
Translates to: HAVQSQLCNDHVSRLSPLPPGQL*CLSTHH
Trigger: ATGGTGGGTGCTGAGACAGCAAAGCTGCCCTGGGGG...GAGAGGAGAGAGTCTGCTAACATGATCATTACAGAGCTGGGACTGTACAGCATG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR-3UTR CCA 90 bp AAGGTAATAATTGCACAACTCCTTATAGTCACTGTGAGCTCCCCCAGGGCAGCTAAGCAGCTGCTGGGTTaGCAGGAGGTGACAACCCTG +
Preference number: 2 (lower is better)
Translates to: KVIIAQLLIVTVSSPRAAKQLLG*QEVTTL
Trigger: CAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGCTT...AGCTGCCCTGGGGGAGCTCACAGTGACTATAAGGAGTTGTGCAATTATTACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR-3UTR TCA 90 bp CCCGGCAGGCTCTCCTGTGATCCCCCACTATATCTCAACTGCATGCTGCTGGTCACCCCAAATGAGAAGTaGAATCTTAACAGATCACAG +
Preference number: 2 (lower is better)
Translates to: PGRLSCDPPLYLNCMLLVTPNEK*NLNRSQ
Trigger: CTGTGATCTGTTAAGATTTCACTTCTCATTTGGGGT...GACCAGCAGCATGCAGTTGAGATATAGTGGGGGATCACAGGAGAGCCTGCCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR-3UTR CCA 90 bp CTTGTGCAAGTGTGCAGAGGACTGATCCCCTCCTCCTCAAGAGACTTTCATAGAGACAACATGTTGCTTTaGGGTCCTACAGAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: LVQVCRGLIPSSSRDFHRDNMLL*GPTEGG
Trigger: CCCTCCTTCTGTAGGACCCCAAAGCAACATGTTGTC...TCTATGAAAGTCTCTTGAGGAGGAGGGGATCAGTCCTCTGCACACTTGCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR-3UTR CCA 90 bp GGGGTTACTAACAGATACACACAGGTACCTCTGAATAGAAATCCCCTTTCATCTCTAACCCTGGAGACCTaGGCGAACAGAGCACACATC +
Preference number: 2 (lower is better)
Translates to: GVTNRYTQVPLNRNPLSSLTLET*ANRAHI
Trigger: GATGTGTGCTCTGTTCGCCCAGGTCTCCAGGGTTAG...AGATGAAAGGGGATTTCTATTCAGAGGTACCTGTGTGTATCTGTTAGTAACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR-3UTR CCA 90 bp TTTGCAGTAACATGCCATGACTTCCCAACTAAGAGTCTGAGGCCATGCTGTACACTCTTGAATCCACAGTaGGTGGTTGTGTTACCCTCT +
Preference number: 2 (lower is better)
Translates to: FAVTCHDFPTKSLRPCCTLLNPQ*VVVLPS
Trigger: AGAGGGTAACACAACCACCCACTGTGGATTCAAGAG...TGTACAGCATGGCCTCAGACTCTTAGTTGGGAAGTCATGGCATGTTACTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR-3UTR GCA 90 bp GAACCTTCCTGTGCTCTTTGGGAAAATAACATTCCTGATGCACCCTGGTGGGAAGGGCTCCTTAACTCCTaGAAAGTTATTCAAGTGCAT +
Preference number: 2 (lower is better)
Translates to: EPSCALWENNIPDAPWWEGLLNS*KVIQVH
Trigger: ATGCACTTGAATAACTTTGCAGGAGTTAAGGAGCCC...TTCCCACCAGGGTGCATCAGGAATGTTATTTTCCCAAAGAGCACAGGAAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR-3UTR GCA 90 bp TCTGGATGCATGCTCTCACCCCAAATGAGAAGTGAAATCTTAACAGATCACAGACCCAAGCTTTGGTCTTaGTGGTTTGCTTTATGTGGC +
Preference number: 2 (lower is better)
Translates to: SGCMLSPQMRSEILTDHRPKLWS*WFALCG
Trigger: GCCACATAAAGCAAACCAGCAAGACCAAAGCTTGGG...TCTGTGATCTGTTAAGATTTCACTTCTCATTTGGGGTGAGAGCATGCATCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR-3UTR CCA 90 bp CTGGGGATGAGAACACCTGCTGAACTGGAACACGCCTGTAAACATGCATCTTGTTTTATGTGGCCCCACTaGATAAATGACAAAACTATC +
Preference number: 2 (lower is better)
Translates to: LGMRTPAELEHACKHASCFMWPH*INDKTI
Trigger: GATAGTTTTGTCATTTATCCAGTGGGGCCACATAAA...ACAAGATGCATGTTTACAGGCGTGTTCCAGTTCAGCAGGTGTTCTCATCCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR-3UTR CCA 90 bp TCTGGATGCATGCTCTCACCCCAAATGAGAAGTGAAATCTTAACAGATCACAGAAAGCTTTGGTCTTGCTaGTTTGCTTTATGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: SGCMLSPQMRSEILTDHRKLWSC*FALCGP
Trigger: GGGGCCACATAAAGCAAACCAGCAAGACCAAAGCTT...TCTGTGATCTGTTAAGATTTCACTTCTCATTTGGGGTGAGAGCATGCATCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR-3UTR CCA 90 bp CATGCTGTACAGTCCCAGCTCTGTAATGATCATGTTAGCAGACTCTCTCCTCTCTGTTCTATAGGAACATaGTTTGTGTCACGTGCACAT +
Preference number: 2 (lower is better)
Translates to: HAVQSQLCNDHVSRLSPLCSIGT*FVSRAH
Trigger: ATGTGCACGTGACACAAACCATGTTCCTATAGAACA...GAGAGGAGAGAGTCTGCTAACATGATCATTACAGAGCTGGGACTGTACAGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR-3UTR CCA 90 bp GAAGGTAATAATTGCACAACTCCTTATAGTCACTGTGAGCTCCCCCAGGGCAGCATAAAAATACAGTTCTaGTACAAAGGTACGACTCGA +
Preference number: 2 (lower is better)
Translates to: EGNNCTTPYSHCELPQGSIKIQF*YKGTTR
Trigger: TCGAGTCGTACCTTTGTACCAGAACTGTATTTTTAT...GCTGCCCTGGGGGAGCTCACAGTGACTATAAGGAGTTGTGCAATTATTACCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR-3UTR CCA 90 bp TTTGCAGTAACATGCCATGACTTCCCAACTAAGAGTCTGAGGCCATGCTGTACACAAACAGCCAAAGCTTaGTGCAAATGTCATTTAAAA +
Preference number: 2 (lower is better)
Translates to: FAVTCHDFPTKSLRPCCTQTAKA*CKCHLK
Trigger: TTTTAAATGACATTTGCACCAAGCTTTGGCTGTTTG...TGTACAGCATGGCCTCAGACTCTTAGTTGGGAAGTCATGGCATGTTACTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR-3UTR TCA 90 bp CTAAAAAGGCCAGATTTTAGCAAGAGAAGATGTTATACACATGCCCAAAGGGCTACACAGCATGATGGTTaGGACTTTGACTTCAGTTTT +
Preference number: 2 (lower is better)
Translates to: LKRPDFSKRRCYTHAQRATQHDG*DFDFSF
Trigger: AAAACTGAAGTCAAAGTCTCAACCATCATGCTGTGT...AGCCCTTTGGGCATGTGTATAACATCTTCTCTTGCTAAAATCTGGCCTTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR-3UTR GCA 90 bp GAAGATGTTATACACATGCCCAAAGGGCTTAAAAGGAGCCAAATTATAATCACAATCTCAACTGCATGCTaGTGGTCAAAGGAGTTAAGT +
Preference number: 2 (lower is better)
Translates to: EDVIHMPKGLKRSQIIITISTAC*WSKELS
Trigger: ACTTAACTCCTTTGACCAGCAGCATGCAGTTGAGAT...TGTGATTATAATTTGGCTCCTTTTAAGCCCTTTGGGCATGTGTATAACATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR-3UTR TCA 90 bp GAAGATGTTATACACATGCCCAAAGGGCTTAAAAGGAGCCAAATTATAATCACATTTTCAGGGAGGAAATaGAATCAAAGAAAGGGGAAT +
Preference number: 2 (lower is better)
Translates to: EDVIHMPKGLKRSQIIITFSGRK*NQRKGN
Trigger: ATTCCCCTTTCTTTGATTTCATTTCCTCCCTGAAAA...TGTGATTATAATTTGGCTCCTTTTAAGCCCTTTGGGCATGTGTATAACATCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR TCA 72 bp GGCGAACAGAGCACACATCTGTATGTCGTGCCGCAGTaGGCACACCACCGAGCCCGAGGAAAGGAAGCGGAC +
Preference number: 3 (lower is better)
Translates to: GEQSTHLYVVPQ*AHHRARGKEAD
Trigger: GTCCGCTTCCTTTCCTCGGGCTCGGTGGTGTGCTCACTGCGGCACGACATACAGATGTGTGCTCTGTTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR GCA 72 bp GCATCCCTCTGTGCAACACAGTGCTTTGGCACGACCTaGAGAAACCCGGCAGGCTCTCCTGTGATCCCCCAC +
Preference number: 3 (lower is better)
Translates to: ASLCATQCFGTT*RNPAGSPVIPH
Trigger: GTGGGGGATCACAGGAGAGCCTGCCGGGTTTCTGCAGGTCGTGCCAAAGCACTGTGTTGCACAGAGGGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR GCA 72 bp GAGACCTGGGCGAACAGAGCACACATCTGTATGTCGTaGCGCAGTGAGCACACCACCGAGCCCGAGGAAAGG +
Preference number: 3 (lower is better)
Translates to: ETWANRAHICMS*RSEHTTEPEER
Trigger: CCTTTCCTCGGGCTCGGTGGTGTGCTCACTGCGGCACGACATACAGATGTGTGCTCTGTTCGCCCAGGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR CCA 72 bp CAAGCCGGAAGCTGGCTTCCGCTAACCCTGGAGACCTaGGCGAACAGAGCACACATCTGTATGTCGTGCCGC +
Preference number: 3 (lower is better)
Translates to: QAGSWLPLTLET*ANRAHICMSCR
Trigger: GCGGCACGACATACAGATGTGTGCTCTGTTCGCCCAGGTCTCCAGGGTTAGCGGAAGCCAGCTTCCGGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR TCA 72 bp CAGGTTTGCAGGGATGTCCACCCACTGAGACTCTTGTaGGCCCAAGGGAGAGGTGGGGGACAAGGTAGGAGC +
Preference number: 3 (lower is better)
Translates to: QVCRDVHPLRLL*AQGRGGGQGRS
Trigger: GCTCCTACCTTGTCCCCCACCTCTCCCTTGGGCTCACAAGAGTCTCAGTGGGTGGACATCCCTGCAAACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR CCA 72 bp GGGGGCATATGCATCCCTCTGTGCAACACAGTGCTTTaGCACGACCTGCAGAAACCCGGCAGGCTCTCCTGT +
Preference number: 3 (lower is better)
Translates to: GGICIPLCNTVL*HDLQKPGRLSC
Trigger: ACAGGAGAGCCTGCCGGGTTTCTGCAGGTCGTGCCAAAGCACTGTGTTGCACAGAGGGATGCATATGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR-3UTR CAA 90 bp TTGTGCTCAGGTTTGCAGGGATGTCCACCCACTGAGACTCTTGTGAGCCCAAGGGAAGCAGCTGCTGGGTaGGCAGGAGGTGACAACCCT +
Preference number: 3 (lower is better)
Translates to: LCSGLQGCPPTETLVSPREAAAG*AGGDNP
Trigger: AGGGTTGTCACCTCCTGCCAACCCAGCAGCTGCTTC...CCTTGGGCTCACAAGAGTCTCAGTGGGTGGACATCCCTGCAAACCTGAGCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR TCA 72 bp CCGGAAACCTTCTGCTGTGTTCTGGAGGCTTCCATCTaGGAGCAAGGGGGAGGAGTGCACACTGCAGAGAGC +
Preference number: 3 (lower is better)
Translates to: PETFCCVLEASI*EQGGGVHTAES
Trigger: GCTCTCTGCAGTGTGCACTCCTCCCCCTTGCTCTCAGATGGAAGCCTCCAGAACACAGCAGAAGGTTTCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR GCA 72 bp AAACATTCATGCGATGCCAGGACGCTCCTCATGGAATaGAAAGGCACCATGGTGGTGACCGGAGGAGGCTTC +
Preference number: 3 (lower is better)
Translates to: KHSCDARTLLME*KGTMVVTGGGF
Trigger: GAAGCCTCCTCCGGTCACCACCATGGTGCCTTTGCATTCCATGAGGAGCGTCCTGGCATCGCATGAATGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR-3UTR CAA 90 bp CATGCTGTACAGTCCCAGCTCTGTAATGATCATGTTAGCAGACTCTCTCCTCTCTCCCCCAGGGCAGCTTaGCTGTCTCAGCACCCACCA +
Preference number: 3 (lower is better)
Translates to: HAVQSQLCNDHVSRLSPLSPRAA*LSQHPP
Trigger: TGGTGGGTGCTGAGACAGCAAAGCTGCCCTGGGGGA...GAGAGGAGAGAGTCTGCTAACATGATCATTACAGAGCTGGGACTGTACAGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR TCA 72 bp GATAAATGGCCACTGCGGCCACTCCTCTCCTTGGGATaGACTGCCTGCGGTTCTGGGTTTGCACATACAAGA +
Preference number: 3 (lower is better)
Translates to: DKWPLRPLLSLG*TACGSGFAHTR
Trigger: TCTTGTATGTGCAAACCCAGAACCGCAGGCAGTTCATCCCAAGGAGAGGAGTGGCCGCAGTGGCCATTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR CCA 72 bp CAGAAGATAAATGGCCACTGCGGCCACTCCTCTCCTTaGGATGAACTGCCTGCGGTTCTGGGTTTGCACATA +
Preference number: 3 (lower is better)
Translates to: QKINGHCGHSSP*DELPAVLGLHI
Trigger: TATGTGCAAACCCAGAACCGCAGGCAGTTCATCCCAAGGAGAGGAGTGGCCGCAGTGGCCATTTATCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR GCA 72 bp AGCGCTGAGCACAGCTATGTCAAAACAGCTTATCTGTaGGCAGGGAGAACTTTACAGCGAGCTGTGGGTAGG +
Preference number: 3 (lower is better)
Translates to: SAEHSYVKTAYL*AGRTLQRAVGR
Trigger: CCTACCCACAGCTCGCTGTAAAGTTCTCCCTGCGCACAGATAAGCTGTTTTGACATAGCTGTGCTCAGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR GCA 72 bp CCTCTCCTTGGGATGAACTGCCTGCGGTTCTGGGTTTaGACATACAAGAGCAACCAGCATGTTTGTGCTCAG +
Preference number: 3 (lower is better)
Translates to: PLLGMNCLRFWV*TYKSNQHVCAQ
Trigger: CTGAGCACAAACATGCTGGTTGCTCTTGTATGTGCAAACCCAGAACCGCAGGCAGTTCATCCCAAGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR-3UTR CAA 90 bp GCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTCCTTGTAATCCCTCTTaGGAGATATTCCGGAGGGAA +
Preference number: 3 (lower is better)
Translates to: AAAGLAGGDNPVFYRNMVPCNPS*EIFRRE
Trigger: TTCCCTCCGGAATATCTCCAAAGAGGGATTACAAGG...AACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR GCA 72 bp GGCAGGCTCTCCTGTGATCCCCCACTATATCTCAACTaGATGCTGCTGGTCAAAGGAGTTAAGTCTAGGATG +
Preference number: 3 (lower is better)
Translates to: GRLSCDPPLYLN*MLLVKGVKSRM
Trigger: CATCCTAGACTTAACTCCTTTGACCAGCAGCATGCAGTTGAGATATAGTGGGGGATCACAGGAGAGCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR GCA 72 bp ACCATACATTTAAGTAGGCAGAAGATAAATGGCCACTaGGGCCACTCCTCTCCTTGGGATGAACTGCCTGCG +
Preference number: 3 (lower is better)
Translates to: TIHLSRQKINGH*GHSSPWDELPA
Trigger: CGCAGGCAGTTCATCCCAAGGAGAGGAGTGGCCGCAGTGGCCATTTATCTTCTGCCTACTTAAATGTATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR CCA 72 bp CCTGTGATCCCCCACTATATCTCAACTGCATGCTGCTaGTCAAAGGAGTTAAGTCTAGGATGGAACCCAGCC +
Preference number: 3 (lower is better)
Translates to: PVIPHYISTACC*SKELSLGWNPA
Trigger: GGCTGGGTTCCATCCTAGACTTAACTCCTTTGACCAGCAGCATGCAGTTGAGATATAGTGGGGGATCACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR-3UTR CAA 90 bp TGCACAGAAACACAAACAGAAGAGCACCCTGGGACTGCCTACGAAGACGTAACGTCCCAAGCTTTGGTCTaGCTGGTTTGCTTTATGTGG +
Preference number: 3 (lower is better)
Translates to: CTETQTEEHPGTAYEDVTSQALV*LVCFMW
Trigger: CCACATAAAGCAAACCAGCAAGACCAAAGCTTGGGA...CGTTACGTCTTCGTAGGCAGTCCCAGGGTGCTCTTCTGTTTGTGTTTCTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR TCA 72 bp AGGTGGTCTACTCCCTTGTGCAAGTGTGCAGAGGACTaGTCCCCTCCTCCTCAAGAGACTTTCATAGAACTA +
Preference number: 3 (lower is better)
Translates to: RWSTPLCKCAED*SPPPQETFIEL
Trigger: TAGTTCTATGAAAGTCTCTTGAGGAGGAGGGGATCAGTCCTCTGCACACTTGCACAAGGGAGTAGACCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR GCA 72 bp TTGCACAGAAACACAAACAGAAGAGCACCCTGGGACTaGCTACGAAGACGTAACGAGGTTAGAGAGGTGCTA +
Preference number: 3 (lower is better)
Translates to: LHRNTNRRAPWD*LRRRNEVREVL
Trigger: TAGCACCTCTCTAACCTCGTTACGTCTTCGTAGGCAGTCCCAGGGTGCTCTTCTGTTTGTGTTTCTGTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR CCA 72 bp GTTAGCAGACTCTCTCCTCTCCTCTTGAATCCACAGTaGGTGGTTGTGTTACCCTCTAGTGCTGTTGTTTGG +
Preference number: 3 (lower is better)
Translates to: VSRLSPLLLNPQ*VVVLPSSAVVW
Trigger: CCAAACAACAGCACTAGAGGGTAACACAACCACCCACTGTGGATTCAAGAGGAGAGGAGAGAGTCTGCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR-3UTR CAA 90 bp CTGGGGATGAGAACACCTGCTGAACTGGAACACGCCTGTAAACATGCATCTTGTCTAAAAGACAACATGTaGCTTTGGGGTCCTACAGAA +
Preference number: 3 (lower is better)
Translates to: LGMRTPAELEHACKHASCLKDNM*LWGPTE
Trigger: TTCTGTAGGACCCCAAAGCAACATGTTGTCTTTTAG...ACAAGATGCATGTTTACAGGCGTGTTCCAGTTCAGCAGGTGTTCTCATCCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR-3UTR CAA 90 bp GAAGGTAATAATTGCACAACTCCTTATAGTCACTGTGAGCTCCCCCAGGGCAGCGAAAAGTGTTCAGCCTaGCTAGCAGTTCATCAAATC +
Preference number: 3 (lower is better)
Translates to: EGNNCTTPYSHCELPQGSEKCSA*LAVHQI
Trigger: GATTTGATGAACTGCTAGCAAGGCTGAACACTTTTC...GCTGCCCTGGGGGAGCTCACAGTGACTATAAGGAGTTGTGCAATTATTACCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR-3UTR CAA 90 bp TGCACAGAAACACAAACAGAAGAGCACCCTGGGACTGCCTACGAAGACGTAACGATGATGGTTGAGACTTaGACTTCAGTTTTAAAGCCA +
Preference number: 3 (lower is better)
Translates to: CTETQTEEHPGTAYEDVTMMVET*TSVLKP
Trigger: TGGCTTTAAAACTGAAGTCAAAGTCTCAACCATCAT...CGTTACGTCTTCGTAGGCAGTCCCAGGGTGCTCTTCTGTTTGTGTTTCTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR GCA 72 bp CGAAAAGCACTAATGACACTTGTACAAAAACATTCATaGGATGCCAGGACGCTCCTCATGGAATGCAAAGGC +
Preference number: 3 (lower is better)
Translates to: RKALMTLVQKHS*DARTLLMECKG
Trigger: GCCTTTGCATTCCATGAGGAGCGTCCTGGCATCGCATGAATGTTTTTGTACAAGTGTCATTAGTGCTTTTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR CCA 72 bp AAACAGTCCTATGTGCTAAGCTATTTTCCCAAGCTTTaGTCTTGCTGGTTTGCTTTATGTGGCCCCACTGGA +
Preference number: 3 (lower is better)
Translates to: KQSYVLSYFPKL*SCWFALCGPTG
Trigger: TCCAGTGGGGCCACATAAAGCAAACCAGCAAGACCAAAGCTTGGGAAAATAGCTTAGCACATAGGACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR CCA 72 bp GCTCTTTGGGAAAATAACATTCCTGATGCACCCTGGTaGGAATTTCTGAAGACCAAAGGCTTCCTTTCTCAC +
Preference number: 3 (lower is better)
Translates to: ALWENNIPDAPW*EFLKTKGFLSH
Trigger: GTGAGAAAGGAAGCCTTTGGTCTTCAGAAATTCCCACCAGGGTGCATCAGGAATGTTATTTTCCCAAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR CCA 72 bp GCTTTGGTCTTGCTGGTTTGCTTTATGTGGCCCCACTaGATAAATGACAAAACTATCAGGATACACAGCATG +
Preference number: 3 (lower is better)
Translates to: ALVLLVCFMWPH*INDKTIRIHSM
Trigger: CATGCTGTGTATCCTGATAGTTTTGTCATTTATCCAGTGGGGCCACATAAAGCAAACCAGCAAGACCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR CCA 72 bp TGTGCTCTTTGGGAAAATAACATTCCTGATGCACCCTaGTGGGAATTTCTGAAGACCAAAGGCTTCCTTTCT +
Preference number: 3 (lower is better)
Translates to: CALWENNIPDAP*WEFLKTKGFLS
Trigger: AGAAAGGAAGCCTTTGGTCTTCAGAAATTCCCACCAGGGTGCATCAGGAATGTTATTTTCCCAAAGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR TCA 72 bp AAAATAACATTCCTGATGCACCCTGGTGGGAATTTCTaGAGACCAAAGGCTTCCTTTCTCACACCCAAAGAT +
Preference number: 3 (lower is better)
Translates to: KITFLMHPGGNF*RPKASFLTPKD
Trigger: ATCTTTGGGTGTGAGAAAGGAAGCCTTTGGTCTTCAGAAATTCCCACCAGGGTGCATCAGGAATGTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR TCA 72 bp ATGTTTGCCCTGCATCATGGACACGCTGAAAGACACTaGGGTACACACTTTAAAATCACTAAAATGGTGGGT +
Preference number: 3 (lower is better)
Translates to: MFALHHGHAERH*GTHFKITKMVG
Trigger: ACCCACCATTTTAGTGATTTTAAAGTGTGTACCTCAGTGTCTTTCAGCGTGTCCATGATGCAGGGCAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR-3UTR CAA 90 bp TTTGCAGTAACATGCCATGACTTCCCAACTAAGAGTCTGAGGCCATGCTGTACATTATCCAAAGTTGTTTaGTATCCAACGAGTTCACAC +
Preference number: 3 (lower is better)
Translates to: FAVTCHDFPTKSLRPCCTLSKVV*YPTSSH
Trigger: GTGTGAACTCGTTGGATACAAAACAACTTTGGATAA...TGTACAGCATGGCCTCAGACTCTTAGTTGGGAAGTCATGGCATGTTACTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR TCA 72 bp TCCCTGGGGTTACTAACAGATACACACAGGTACCTCTaGATAGAAATCCCCTTTCATCTAGAAACTTCCTAT +
Preference number: 3 (lower is better)
Translates to: SLGLLTDTHRYL*IEIPFHLETSY
Trigger: ATAGGAAGTTTCTAGATGAAAGGGGATTTCTATTCAGAGGTACCTGTGTGTATCTGTTAGTAACCCCAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR TCA 72 bp AGAGGAACCTTGAAAACATGGTTAAATGAGAGAAGCTaGTCATGGAAGCCCACATACTATATGATTCCAGTT +
Preference number: 3 (lower is better)
Translates to: RGTLKTWLNERS*SWKPTYYMIPV
Trigger: AACTGGAATCATATAGTATGTGGGCTTCCATGATCAGCTTCTCTCATTTAACCATGTTTTCAAGGTTCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR CCA 72 bp GAAGGCAAACTACAATACAACATAAAAATACAGTTCTaGTACAAAGGTACGACTCGATCAGTTCTATTGACC +
Preference number: 3 (lower is better)
Translates to: EGKLQYNIKIQF*YKGTTRSVLLT
Trigger: GGTCAATAGAACTGATCGAGTCGTACCTTTGTACCAGAACTGTATTTTTATGTTGTATTGTAGTTTGCCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGCCCGAGGCGGAGATGTaGACAGCCGCGCCGCCGGTG +
Preference number: 4 (lower is better)
Translates to: EERKRTKAPCHLQAARVEPEAEM*TAAPPV
Trigger: CACCGGCGGCGCGGCTGTGCACATCTCCGCCTCGGG...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGGCGCGTAGCGCTGCATaGAGCGGCGGCCAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: EERKRTKAPCHLQAARVEARSAA*SGGQRS
Trigger: GGACCTTTGGCCGCCGCTCCATGCAGCGCTACGCGC...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGGGTCAGAGGGACTCTTaGCCCCTGGGGACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: EERKRTKAPCHLQAARVEGQRDS*PLGTAG
Trigger: GCCCGCTGTCCCCAGGGGCCAAGAGTCCCTCTGACC...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp TTGTGCTCAGGTTTGCAGGGATGTCCACCCACTGAGACTCTTGTGAGCCCAAGGGGGCGCCACCGGGGCTaGCTGGGGTGGACGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LCSGLQGCPPTETLVSPRGRHRG*LGWTSG
Trigger: TCCTGACGTCCACCCCAGCCAGCCCCGGTGGCGCCC...CCTTGGGCTCACAAGAGTCTCAGTGGGTGGACATCCCTGCAAACCTGAGCACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp AGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGGTCAGAGGGACTCTTaGCCCCTGGGGACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: RKGSGRRHHAISRQQGWSGQRDS*PLGTAG
Trigger: GCCCGCTGTCCCCAGGGGCCAAGAGTCCCTCTGACC...ACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp GGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGGATCCAGCCAGTGCGTaGCCTGGGCAGAGTCGAGGA +
Preference number: 4 (lower is better)
Translates to: GKEADEGTMPSPGSKGGVDPASA*PGQSRG
Trigger: TCCTCGACTCTGCCCAGGTCACGCACTGGCTGGATC...CACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGGTCAGGGAGCCTCCGTaGTCAGAGGGACTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GKEADEGTMPSPGSKGGVVREPP*SEGLLA
Trigger: GGCCAAGAGTCCCTCTGACCACGGAGGCTCCCTGAC...CACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGGGGACAGCGGGCTCTTaGCTTCTGACTTCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: EERKRTKAPCHLQAARVEGTAGS*LLTSEA
Trigger: CGCCTCAGAAGTCAGAAGTCAAGAGCCCGCTGTCCC...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGTGGTGGCTCCCACTaGCTCAGCAAGGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EERKRTKAPCHLQAARVECGGSH*LSKVWR
Trigger: CCTCCAGACCTTGCTGAGGCAGTGGGAGCCACCACA...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGCGTCTCTGCACTGGTTaGCAGAGAGACGGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: EERKRTKAPCHLQAARVERLCTG*QRDGLP
Trigger: CGGAAGCCCGTCTCTCTGGCAACCAGTGCAGAGACG...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTTCTCCACAGCTGGCTaGGCGGCTTCCACGCGGATA +
Preference number: 4 (lower is better)
Translates to: EERKRTKAPCHLQAARVEFSTAG*AASTRI
Trigger: TATCCGCGTGGAAGCCGCCCAGCCAGCTGTGGAGAA...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGTTCTCCACAGCTGGCTaGGCGGCTTCCACGCGGATA +
Preference number: 4 (lower is better)
Translates to: GKEADEGTMPSPGSKGGVFSTAG*AASTRI
Trigger: TATCCGCGTGGAAGCCGCCCAGCCAGCTGTGGAGAA...CACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTCACAGTGGGGGCTGCTaGCGGGCTCTGCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: AAAGLAGGDNPVFYRNMVHSGGC*RALPEG
Trigger: CCCCTCTGGCAGAGCCCGCCAGCAGCCCCCACTGTG...AACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTTTGGGGGACGCCAGTaGCACCGAAACTTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: EERKRTKAPCHLQAARVEFGGRQ*HRNLSG
Trigger: GCCACTCAAGTTTCGGTGTCACTGGCGTCCCCCAAA...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGCGGGCTCTTGACTTCTaGCTTCTGAGGCGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: EERKRTKAPCHLQAARVERALDF*LLRRAD
Trigger: GTCAGCTCGCCTCAGAAGTCAGAAGTCAAGAGCCCG...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp GGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGCTGAACACGAAGGTGTaGTCTTGCTCACGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GKEADEGTMPSPGSKGGVLNTKV*SCSRPW
Trigger: CCAGGGGCGTGAGCAAGAGCACACCTTCGTGTTCAG...CACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTGCCACCGGGGCTGGCTaGGGTGGACGTCAGGATGGT +
Preference number: 4 (lower is better)
Translates to: AAAGLAGGDNPVFYRNMVATGAG*GGRQDG
Trigger: ACCATCCTGACGTCCACCCCAGCCAGCCCCGGTGGC...AACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp TGCTGGTCAAAGGAGTTAAGTCTAGGATGGAACCCAGCCTCTACGCTGATCACAGGGCGCCACCGGGGCTaGCTGGGGTGGACGTCAGGA +
Preference number: 4 (lower is better)
Translates to: CWSKELSLGWNPASTLITGRHRG*LGWTSG
Trigger: TCCTGACGTCCACCCCAGCCAGCCCCGGTGGCGCCC...TGTGATCAGCGTAGAGGCTGGGTTCCATCCTAGACTTAACTCCTTTGACCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CCA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGGTTGTGGCTGTGGTaGCTCCCACTGCCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: EERKRTKAPCHLQAARVEWLWLW*LPLPQQ
Trigger: TTGCTGAGGCAGTGGGAGCCACCACAGCCACAACCA...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGTGGTGGTTGTGGTTGTaGCTGTGGTGGCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: GKEADEGTMPSPGSKGGVWWLWL*LWWLPL
Trigger: CAGTGGGAGCCACCACAGCCACAACCACAACCACCA...CACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp AGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTCGGGTAGCTGACATTTaGAGAGTGAGGGCGCCACCG +
Preference number: 4 (lower is better)
Translates to: RKGSGRRHHAISRQQGWSRVADI*RVRAPP
Trigger: CGGTGGCGCCCTCACTCTCCAAATGTCAGCTACCCG...ACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp AGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTTCACACGGGGAGGCTTaGTTTCCGGCTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: RKGSGRRHHAISRQQGWSSHGEA*FPASPQ
Trigger: CTGTGGAGAAGCCGGAAATCAAGCCTCCCCGTGTGA...ACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp AGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTTTTGGGGGACGCCAGTaGCACCGAAACTTGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RKGSGRRHHAISRQQGWSFGGRQ*HRNLSG
Trigger: GCCACTCAAGTTTCGGTGTCACTGGCGTCCCCCAAA...ACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp AGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGGCAGCAGCGGGGTCTaGAGGGTCTTCTCTGAAACT +
Preference number: 4 (lower is better)
Translates to: RKGSGRRHHAISRQQGWSGSSGV*RVFSET
Trigger: AGTTTCAGAGAAGACCCTTCAGACCCCGCTGCTGCC...ACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp GGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGTCTCTTTCCAGTTCCTaGCGGAGCGTCTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: GKEADEGTMPSPGSKGGVSLSSS*RSVSAL
Trigger: CAGTGCAGAGACGCTCCGGCAGGAACTGGAAAGAGA...CACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp AGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTTTGTGGTTGTGGCTGTaGTGGCTCCCACTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RKGSGRRHHAISRQQGWSLWLWL*WLPLPQ
Trigger: CTGAGGCAGTGGGAGCCACCACAGCCACAACCACAA...ACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTCGAGAGTGTGCACAGTaGGGGCTGCTGGCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: AAAGLAGGDNPVFYRNMVRECAQ*GLLAGS
Trigger: AGAGCCCGCCAGCAGCCCCCACTGTGCACACTCTCG...AACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp GGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGAGTGACACCGAAACTTaGGTGGCAGACATCGTGGTG +
Preference number: 4 (lower is better)
Translates to: GKEADEGTMPSPGSKGGVSDTET*VADIVV
Trigger: CACCACGATGTCTGCCACTCAAGTTTCGGTGTCACT...CACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp TGCTGGTCAAAGGAGTTAAGTCTAGGATGGAACCCAGCCTCTACGCTGATCACAGCCACCGGGGCTGGCTaGGGTGGACGTCAGGATGGT +
Preference number: 4 (lower is better)
Translates to: CWSKELSLGWNPASTLITATGAG*GGRQDG
Trigger: ACCATCCTGACGTCCACCCCAGCCAGCCCCGGTGGC...TGTGATCAGCGTAGAGGCTGGGTTCCATCCTAGACTTAACTCCTTTGACCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CCA 90 bp GGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGTGCCTCAGCAAGGTCTaGAGGGAGGTCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: GKEADEGTMPSPGSKGGVCLSKV*REVIFI
Trigger: GATGAAGATGACCTCCCTCCAGACCTTGCTGAGGCA...CACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTCCGGGAGGTATAGATaGTCTGTACTGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: EERKRTKAPCHLQAARVESGRYR*SVLWPQ
Trigger: CTGTGGCCACAGTACAGACCATCTATACCTCCCGGA...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp TCAAAGGAGTTAAGTCTAGGATGGAACCCAGCCTCTACGCTGATCACACAGGGTCTGACATTTGGAGAGTaGGGGCGCCACCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SKELSLGWNPASTLITQGLTFGE*GRHRGW
Trigger: CCAGCCCCGGTGGCGCCCTCACTCTCCAAATGTCAG...ACCCTGTGTGATCAGCGTAGAGGCTGGGTTCCATCCTAGACTTAACTCCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR GCA 90 bp GCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTTGTGGTGGCTCCCACTaGCTCAGCAAGGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AAAGLAGGDNPVFYRNMVCGGSH*LSKVWR
Trigger: CCTCCAGACCTTGCTGAGGCAGTGGGAGCCACCACA...AACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTAGTAAAGGGTGGCCTTaGCAGCTCCCGAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: AAAGLAGGDNPVFYRNMVSKGWP*QLPRRR
Trigger: TCTCCGCCTCGGGAGCTGCCAAGGCCACCCTTTACT...AACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTAGCCAGTGCGTGACCTaGGCAGAGTCGAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: AAAGLAGGDNPVFYRNMVSQCVT*AESRNC
Trigger: GCAGTTCCTCGACTCTGCCCAGGTCACGCACTGGCT...AACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp TTGTGCTCAGGTTTGCAGGGATGTCCACCCACTGAGACTCTTGTGAGCCCAAGGTGGTGGTTGTGGTTGTaGCTGTGGTGGCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: LCSGLQGCPPTETLVSPRWWLWL*LWWLPL
Trigger: CAGTGGGAGCCACCACAGCCACAACCACAACCACCA...CCTTGGGCTCACAAGAGTCTCAGTGGGTGGACATCCCTGCAAACCTGAGCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp GGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGTCCATGGCTTCTGTCTaGTTTGGGATGAACCGAAAC +
Preference number: 4 (lower is better)
Translates to: GKEADEGTMPSPGSKGGVSMASV*FGMNRN
Trigger: GTTTCGGTTCATCCCAAATCAGACAGAAGCCATGGA...CACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp AAGGTAATAATTGCACAACTCCTTATAGTCACTGTGAGCTCCCCCAGGGCAGCTCTGACATTTGGAGAGTaGGGGCGCCACCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KVIIAQLLIVTVSSPRAALTFGE*GRHRGW
Trigger: CCAGCCCCGGTGGCGCCCTCACTCTCCAAATGTCAG...AGCTGCCCTGGGGGAGCTCACAGTGACTATAAGGAGTTGTGCAATTATTACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp TTGTGCTCAGGTTTGCAGGGATGTCCACCCACTGAGACTCTTGTGAGCCCAAGGCGTTCTCTTCGAGGCTaGAAGGCAGCCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LCSGLQGCPPTETLVSPRRSLRG*KAAFLW
Trigger: CCACAGAAAGGCTGCCTTTCAGCCTCGAAGAGAACG...CCTTGGGCTCACAAGAGTCTCAGTGGGTGGACATCCCTGCAAACCTGAGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp TCTGGATGCATGCTCTCACCCCAAATGAGAAGTGAAATCTTAACAGATCACAGACCCGAGGCGGAGATGTaGACAGCCGCGCCGCCGGTG +
Preference number: 4 (lower is better)
Translates to: SGCMLSPQMRSEILTDHRPEAEM*TAAPPV
Trigger: CACCGGCGGCGCGGCTGTGCACATCTCCGCCTCGGG...TCTGTGATCTGTTAAGATTTCACTTCTCATTTGGGGTGAGAGCATGCATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR GCA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGGTTCTCTCTAAAGTCTaGAGGGAACTGTGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: EERKRTKAPCHLQAARVEVLSKV*RELWSC
Trigger: ACAGGACCACAGTTCCCTGCAGACTTTAGAGAGAAC...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTTTGTGGTTGTGGCTGTaGTGGCTCCCACTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: AAAGLAGGDNPVFYRNMVLWLWL*WLPLPQ
Trigger: CTGAGGCAGTGGGAGCCACCACAGCCACAACCACAA...AACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp AGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTAGATGGTCTGTACTGTaGCCACAGTCTCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: RKGSGRRHHAISRQQGWSRWSVL*PQSLSV
Trigger: CACTGACAGAGACTGTGGCCACAGTACAGACCATCT...ACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp GGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGCTGTCTGATTTGGGATaGACCGAAACTCAGACACAA +
Preference number: 4 (lower is better)
Translates to: GKEADEGTMPSPGSKGGVLSDLG*TETQTQ
Trigger: TTGTGTCTGAGTTTCGGTTCATCCCAAATCAGACAG...CACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp AGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGTTCTCTCTAAAGTCTaGCAGAGGGGTAGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RKGSGRRHHAISRQQGWSVLSKV*QRGSFC
Trigger: ACAGAAGCTACCCCTCTGGCAGACTTTAGAGAGAAC...ACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044022.5
CDS-3UTR CCA 90 bp GGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGAAGTGGTACACAATCTaGTCGAACAAATCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GKEADEGTMPSPGSKGGVKWYTI*SNKSWP
Trigger: AGGCCAGGATTTGTTCGACCAGATTGTGTACCACTT...CACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp AAGGTAATAATTGCACAACTCCTTATAGTCACTGTGAGCTCCCCCAGGGCAGCTGTCAGGGAGCCTCCGTaGTCAGAGGGACTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KVIIAQLLIVTVSSPRAAVREPP*SEGLLA
Trigger: GGCCAAGAGTCCCTCTGACCACGGAGGCTCCCTGAC...AGCTGCCCTGGGGGAGCTCACAGTGACTATAAGGAGTTGTGCAATTATTACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp CATGCTGTACAGTCCCAGCTCTGTAATGATCATGTTAGCAGACTCTCTCCTCTCCAGGGCTGGCGTGCCTaGACTCAGTTTGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: HAVQSQLCNDHVSRLSPLQGWRA*TQFGEG
Trigger: GCCCTCACCAAACTGAGTCCAGGCACGCCAGCCCTG...GAGAGGAGAGAGTCTGCTAACATGATCATTACAGAGCTGGGACTGTACAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp AGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTCAGCCTCGTTTTGATTaGACGGTACATGCAAACTCC +
Preference number: 4 (lower is better)
Translates to: RKGSGRRHHAISRQQGWSQPRFD*TVHANS
Trigger: GGAGTTTGCATGTACCGTCCAATCAAAACGAGGCTG...ACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR CAA 72 bp GCTAGGGGAGGGGCAGAGTCACAGGTCAGATTATGTTaGCCCTGCATCATGGACACGCTGAAAGACACTGAG +
Preference number: 4 (lower is better)
Translates to: ARGGAESQVRLC*PCIMDTLKDTE
Trigger: CTCAGTGTCTTTCAGCGTGTCCATGATGCAGGGCAAACATAATCTGACCTGTGACTCTGCCCCTCCCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp TGCATCCCTCTGTGCAACACAGTGCTTTGGCACGACCTGCAGAAACCCGGCAGGCTGTCTGATTTGGGATaGACCGAAACTCAGACACAA +
Preference number: 4 (lower is better)
Translates to: CIPLCNTVLWHDLQKPGRLSDLG*TETQTQ
Trigger: TTGTGTCTGAGTTTCGGTTCATCCCAAATCAGACAG...CCTGCCGGGTTTCTGCAGGTCGTGCCAAAGCACTGTGTTGCACAGAGGGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR GCA 90 bp CTTGTGCAAGTGTGCAGAGGACTGATCCCCTCCTCCTCAAGAGACTTTCATAGACTGAACACGAAGGTGTaGTCTTGCTCACGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LVQVCRGLIPSSSRDFHRLNTKV*SCSRPW
Trigger: CCAGGGGCGTGAGCAAGAGCACACCTTCGTGTTCAG...TCTATGAAAGTCTCTTGAGGAGGAGGGGATCAGTCCTCTGCACACTTGCACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CCA 90 bp GCTAAGCTATTTTCCCAAGCTTTGGTCTTGCTGGTTTGCTTTATGTGGCCCCACAGTAAAGGGTGGCCTTaGCAGCTCCCGAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: AKLFSQALVLLVCFMWPHSKGWP*QLPRRR
Trigger: TCTCCGCCTCGGGAGCTGCCAAGGCCACCCTTTACT...GTGGGGCCACATAAAGCAAACCAGCAAGACCAAAGCTTGGGAAAATAGCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CCA 90 bp GCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTAGACGGAAGAAGGCATaGTGCTCCACTGCACACTTC +
Preference number: 4 (lower is better)
Translates to: AAAGLAGGDNPVFYRNMVRRKKA*CSTAHF
Trigger: GAAGTGTGCAGTGGAGCACCATGCCTTCTTCCGTCT...AACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp TTGTGCTCAGGTTTGCAGGGATGTCCACCCACTGAGACTCTTGTGAGCCCAAGGTCCTCTCAAAGGTGCTaGTTCTTCGCAATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LCSGLQGCPPTETLVSPRSSQRC*FFAIWS
Trigger: GCTCCAGATTGCGAAGAACCAGCACCTTTGAGAGGA...CCTTGGGCTCACAAGAGTCTCAGTGGGTGGACATCCCTGCAAACCTGAGCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTTCCGGGAGGTATAGATaGTCTGTACTGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: AAAGLAGGDNPVFYRNMVSGRYR*SVLWPQ
Trigger: CTGTGGCCACAGTACAGACCATCTATACCTCCCGGA...AACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp GAACCTTCCTGTGCTCTTTGGGAAAATAACATTCCTGATGCACCCTGGTGGGAATCACACGGGGAGGCTTaGTTTCCGGCTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: EPSCALWENNIPDAPWWESHGEA*FPASPQ
Trigger: CTGTGGAGAAGCCGGAAATCAAGCCTCCCCGTGTGA...TTCCCACCAGGGTGCATCAGGAATGTTATTTTCCCAAAGAGCACAGGAAGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp GAACCTTCCTGTGCTCTTTGGGAAAATAACATTCCTGATGCACCCTGGTGGGAACGGGCTCTTGACTTCTaGCTTCTGAGGCGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: EPSCALWENNIPDAPWWERALDF*LLRRAD
Trigger: GTCAGCTCGCCTCAGAAGTCAGAAGTCAAGAGCCCG...TTCCCACCAGGGTGCATCAGGAATGTTATTTTCCCAAAGAGCACAGGAAGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp TGCTGGTCAAAGGAGTTAAGTCTAGGATGGAACCCAGCCTCTACGCTGATCACACGGAAGAAGGCATGGTaGTCCACTGCACACTTCCAC +
Preference number: 4 (lower is better)
Translates to: CWSKELSLGWNPASTLITRKKAW*STAHFH
Trigger: GTGGAAGTGTGCAGTGGAGCACCATGCCTTCTTCCG...TGTGATCAGCGTAGAGGCTGGGTTCCATCCTAGACTTAACTCCTTTGACCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR GCA 90 bp TTTGCAGTAACATGCCATGACTTCCCAACTAAGAGTCTGAGGCCATGCTGTACACGTCTCTGCACTGGTTaGCAGAGAGACGGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: FAVTCHDFPTKSLRPCCTRLCTG*QRDGLP
Trigger: CGGAAGCCCGTCTCTCTGGCAACCAGTGCAGAGACG...TGTACAGCATGGCCTCAGACTCTTAGTTGGGAAGTCATGGCATGTTACTGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp GAAGGTAATAATTGCACAACTCCTTATAGTCACTGTGAGCTCCCCCAGGGCAGCTCTCTTTCCAGTTCCTaGCGGAGCGTCTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: EGNNCTTPYSHCELPQGSSLSSS*RSVSAL
Trigger: CAGTGCAGAGACGCTCCGGCAGGAACTGGAAAGAGA...GCTGCCCTGGGGGAGCTCACAGTGACTATAAGGAGTTGTGCAATTATTACCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp GCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTCAGCTTCTTCAGATGTaGAGCTGCTTCGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: AAAGLAGGDNPVFYRNMVQLLQM*SCFAVQ
Trigger: CTGTACAGCGAAGCAGCTGCACATCTGAAGAAGCTG...AACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTAGATGGTCTGTACTGTaGCCACAGTCTCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: AAAGLAGGDNPVFYRNMVRWSVL*PQSLSV
Trigger: CACTGACAGAGACTGTGGCCACAGTACAGACCATCT...AACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp GAAGGTAATAATTGCACAACTCCTTATAGTCACTGTGAGCTCCCCCAGGGCAGCAGTGACACCGAAACTTaGGTGGCAGACATCGTGGTG +
Preference number: 4 (lower is better)
Translates to: EGNNCTTPYSHCELPQGSSDTET*VADIVV
Trigger: CACCACGATGTCTGCCACTCAAGTTTCGGTGTCACT...GCTGCCCTGGGGGAGCTCACAGTGACTATAAGGAGTTGTGCAATTATTACCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp CGATGCCAGGACGCTCCTCATGGAATGCAAAGGCACCATGGTGGTGACCGGAGGCCAGAAAGAATGTCATaGCTGAGTTGTAAAACAAAC +
Preference number: 4 (lower is better)
Translates to: RCQDAPHGMQRHHGGDRRPERMS*LSCKTN
Trigger: GTTTGTTTTACAACTCAGGCATGACATTCTTTCTGG...CCTCCGGTCACCACCATGGTGCCTTTGCATTCCATGAGGAGCGTCCTGGCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR GCA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGGTGCTTTCAAAATGTTaGACTTCACATGATCTGCTA +
Preference number: 4 (lower is better)
Translates to: EERKRTKAPCHLQAARVEVLSKC*TSHDLL
Trigger: TAGCAGATCATGTGAAGTGCAACATTTTGAAAGCAC...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp TTGTGCTCAGGTTTGCAGGGATGTCCACCCACTGAGACTCTTGTGAGCCCAAGGGGCTTCTGTCTGATTTaGGATGAACCGAAACTCAGA +
Preference number: 4 (lower is better)
Translates to: LCSGLQGCPPTETLVSPRGFCLI*DEPKLR
Trigger: TCTGAGTTTCGGTTCATCCCAAATCAGACAGAAGCC...CCTTGGGCTCACAAGAGTCTCAGTGGGTGGACATCCCTGCAAACCTGAGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGCTGACATTGGTATCCTaGAGATTCGATTTCTTATTG +
Preference number: 4 (lower is better)
Translates to: GKEADEGTMPSPGSKGGVLTLVS*RFDFLL
Trigger: CAATAAGAAATCGAATCTCCAGGATACCAATGTCAG...CACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
3UTR CAA 72 bp TCCTCTCCTTGGGATGAACTGCCTGCGGTTCTGGGTTaGCACATACAAGAGCAACCAGCATGTTTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SSPWDELPAVLG*HIQEQPACLCS
Trigger: TGAGCACAAACATGCTGGTTGCTCTTGTATGTGCAAACCCAGAACCGCAGGCAGTTCATCCCAAGGAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp CTAAAAAGGCCAGATTTTAGCAAGAGAAGATGTTATACACATGCCCAAAGGGCTGATCCAGCCAGTGCGTaGCCTGGGCAGAGTCGAGGA +
Preference number: 4 (lower is better)
Translates to: LKRPDFSKRRCYTHAQRADPASA*PGQSRG
Trigger: TCCTCGACTCTGCCCAGGTCACGCACTGGCTGGATC...AGCCCTTTGGGCATGTGTATAACATCTTCTCTTGCTAAAATCTGGCCTTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR TCA 90 bp CCCGGCAGGCTCTCCTGTGATCCCCCACTATATCTCAACTGCATGCTGCTGGTCAAGGTTGTTTGGTTCTaGAGAATAGTATTTGACTCG +
Preference number: 4 (lower is better)
Translates to: PGRLSCDPPLYLNCMLLVKVVWF*RIVFDS
Trigger: CGAGTCAAATACTATTCTTCAGAACCAAACAACCTT...GACCAGCAGCATGCAGTTGAGATATAGTGGGGGATCACAGGAGAGCCTGCCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR TCA 90 bp CATGCTGTACAGTCCCAGCTCTGTAATGATCATGTTAGCAGACTCTCTCCTCTCAGCCATCTCTTCCCCTaGCAACATGCATGTCCACTC +
Preference number: 4 (lower is better)
Translates to: HAVQSQLCNDHVSRLSPLSHLFP*QHACPL
Trigger: GAGTGGACATGCATGTTGTCAGGGGAAGAGATGGCT...GAGAGGAGAGAGTCTGCTAACATGATCATTACAGAGCTGGGACTGTACAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp TTGTGCTCAGGTTTGCAGGGATGTCCACCCACTGAGACTCTTGTGAGCCCAAGGCTTCAAAGATTAATATaGCTGTCGGGGTCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LCSGLQGCPPTETLVSPRLQRLI*LSGSVQ
Trigger: TTGGACTGACCCCGACAGGCATATTAATCTTTGAAG...CCTTGGGCTCACAAGAGTCTCAGTGGGTGGACATCCCTGCAAACCTGAGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp AGAAACACAAACAGAAGAGCACCCTGGGACTGCCTACGAAGACGTAACGAGGTTGCTTCCTCTCAAAGGTaGTGGTTCTTCGCAATCTGG +
Preference number: 4 (lower is better)
Translates to: RNTNRRAPWDCLRRRNEVASSQR*WFFAIW
Trigger: CCAGATTGCGAAGAACCAGCACCTTTGAGAGGAAGC...AACCTCGTTACGTCTTCGTAGGCAGTCCCAGGGTGCTCTTCTGTTTGTGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR GCA 90 bp AGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTTCATCAAAACTATACTaGCTTGTTAACCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: RKGSGRRHHAISRQQGWSSSKLY*LVNLLT
Trigger: TGTGAGGAGGTTAACAAGGCAGTATAGTTTTGATGA...ACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp GGGGTTACTAACAGATACACACAGGTACCTCTGAATAGAAATCCCCTTTCATCTAGAACAGCGAGAGTGTaGACAGTGGGGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GVTNRYTQVPLNRNPLSSRTARV*TVGAAG
Trigger: GCCAGCAGCCCCCACTGTGCACACTCTCGCTGTTCT...AGATGAAAGGGGATTTCTATTCAGAGGTACCTGTGTGTATCTGTTAGTAACCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GAAGATGTTATACACATGCCCAAAGGGCTTAAAAGGAGCCAAATTATAATCACAGCGCGTAGCGCTGCATaGAGCGGCGGCCAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: EDVIHMPKGLKRSQIIITARSAA*SGGQRS
Trigger: GGACCTTTGGCCGCCGCTCCATGCAGCGCTACGCGC...TGTGATTATAATTTGGCTCCTTTTAAGCCCTTTGGGCATGTGTATAACATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CCA 90 bp GAAGGTAATAATTGCACAACTCCTTATAGTCACTGTGAGCTCCCCCAGGGCAGCTCCACCAGGTCCAAGTaGTACACAATCTGGTCGAAC +
Preference number: 4 (lower is better)
Translates to: EGNNCTTPYSHCELPQGSSTRSK*YTIWSN
Trigger: GTTCGACCAGATTGTGTACCACTTGGACCTGGTGGA...GCTGCCCTGGGGGAGCTCACAGTGACTATAAGGAGTTGTGCAATTATTACCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp CCCTGGGACTGCCTACGAAGACGTAACGAGGTTAGAGAGGTGCTACTTGAATCGTCATCTGTTTCTTTATaGGTTTCGCGTGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: PWDCLRRRNEVREVLLESSSVSL*VSRDPA
Trigger: GGCTGGATCACGCGAAACCCATAAAGAAACAGATGA...CGATTCAAGTAGCACCTCTCTAACCTCGTTACGTCTTCGTAGGCAGTCCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CCA 90 bp TGCTGGTCAAAGGAGTTAAGTCTAGGATGGAACCCAGCCTCTACGCTGATCACATCCTCTCAAAGGTGCTaGTTCTTCGCAATCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CWSKELSLGWNPASTLITSSQRC*FFAIWS
Trigger: GCTCCAGATTGCGAAGAACCAGCACCTTTGAGAGGA...TGTGATCAGCGTAGAGGCTGGGTTCCATCCTAGACTTAACTCCTTTGACCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CCA 90 bp CATGCTGTACAGTCCCAGCTCTGTAATGATCATGTTAGCAGACTCTCTCCTCTCGTGAAAGGCCGTAGTTaGAGTGGTGCTGGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: HAVQSQLCNDHVSRLSPLVKGRS*SGAGAD
Trigger: ATCAGCACCAGCACCACTCCAACTACGGCCTTTCAC...GAGAGGAGAGAGTCTGCTAACATGATCATTACAGAGCTGGGACTGTACAGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp CTTGTGCAAGTGTGCAGAGGACTGATCCCCTCCTCCTCAAGAGACTTTCATAGAAGATGGAATGGTTACTaGCATTTGGAGAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LVQVCRGLIPSSSRDFHRRWNGY*HLESEG
Trigger: GCCCTCACTCTCCAAATGTCAGTAACCATTCCATCT...TCTATGAAAGTCTCTTGAGGAGGAGGGGATCAGTCCTCTGCACACTTGCACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR TCA 90 bp TTTGCAGTAACATGCCATGACTTCCCAACTAAGAGTCTGAGGCCATGCTGTACAATTCTCCAGGGTCAGTaGAAGGCCGTAGTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: FAVTCHDFPTKSLRPCCTILQGQ*KAVVGV
Trigger: CACTCCAACTACGGCCTTTCACTGACCCTGGAGAAT...TGTACAGCATGGCCTCAGACTCTTAGTTGGGAAGTCATGGCATGTTACTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp AAGGTAATAATTGCACAACTCCTTATAGTCACTGTGAGCTCCCCCAGGGCAGCTGCTTCCTCTCAAAGGTaGTGGTTCTTCGCAATCTGG +
Preference number: 4 (lower is better)
Translates to: KVIIAQLLIVTVSSPRAAASSQR*WFFAIW
Trigger: CCAGATTGCGAAGAACCAGCACCTTTGAGAGGAAGC...AGCTGCCCTGGGGGAGCTCACAGTGACTATAAGGAGTTGTGCAATTATTACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp CTATATAAAAAGGGAGTTAAGTTTCTTCCAGGTCAGATCCTATCAACATGGTTAGTGCACAGTGGGGGCTaGTGGCGGGCTCTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LYKKGVKFLPGQILSTWLVHSGG*WRALPE
Trigger: CTCTGGCAGAGCCCGCCAGCAGCCCCCACTGTGCAC...TAACCATGTTGATAGGATCTGACCTGGAAGAAACTTAACTCCCTTTTTATATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp GCTAAGCTATTTTCCCAAGCTTTGGTCTTGCTGGTTTGCTTTATGTGGCCCCACTGGTCGAACAAATCCTaGCCTTTGGCATGTTTCGGC +
Preference number: 4 (lower is better)
Translates to: AKLFSQALVLLVCFMWPHWSNKS*PLACFG
Trigger: GCCGAAACATGCCAAAGGCCAGGATTTGTTCGACCA...GTGGGGCCACATAAAGCAAACCAGCAAGACCAAAGCTTGGGAAAATAGCTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CCA 90 bp TGCACAGAAACACAAACAGAAGAGCACCCTGGGACTGCCTACGAAGACGTAACGGGCTTCTGTCTGATTTaGGATGAACCGAAACTCAGA +
Preference number: 4 (lower is better)
Translates to: CTETQTEEHPGTAYEDVTGFCLI*DEPKLR
Trigger: TCTGAGTTTCGGTTCATCCCAAATCAGACAGAAGCC...CGTTACGTCTTCGTAGGCAGTCCCAGGGTGCTCTTCTGTTTGTGTTTCTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR GCA 90 bp TTGTGCTCAGGTTTGCAGGGATGTCCACCCACTGAGACTCTTGTGAGCCCAAGGCCAGAAAGAATGTCATaGCTGAGTTGTAAAACAAAC +
Preference number: 4 (lower is better)
Translates to: LCSGLQGCPPTETLVSPRPERMS*LSCKTN
Trigger: GTTTGTTTTACAACTCAGGCATGACATTCTTTCTGG...CCTTGGGCTCACAAGAGTCTCAGTGGGTGGACATCCCTGCAAACCTGAGCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp TCTGGATGCATGCTCTCACCCCAAATGAGAAGTGAAATCTTAACAGATCACAGATCTCCTAGCTCCGCTTaGAGACAGAGGGCAGCTAGT +
Preference number: 4 (lower is better)
Translates to: SGCMLSPQMRSEILTDHRSPSSA*RQRAAS
Trigger: ACTAGCTGCCCTCTGTCTGCAAGCGGAGCTAGGAGA...TCTGTGATCTGTTAAGATTTCACTTCTCATTTGGGGTGAGAGCATGCATCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CCA 90 bp AGAAACACAAACAGAAGAGCACCCTGGGACTGCCTACGAAGACGTAACGAGGTTAAGTGGTACACAATCTaGTCGAACAAATCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RNTNRRAPWDCLRRRNEVKWYTI*SNKSWP
Trigger: AGGCCAGGATTTGTTCGACCAGATTGTGTACCACTT...AACCTCGTTACGTCTTCGTAGGCAGTCCCAGGGTGCTCTTCTGTTTGTGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CCA 90 bp AGGATACACAGCATGATGGTTGAGACTTTGACTTCAGTTTTAAAGCCAGCATATAGCCAGTGCGTGACCTaGGCAGAGTCGAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: RIHSMMVETLTSVLKPAYSQCVT*AESRNC
Trigger: GCAGTTCCTCGACTCTGCCCAGGTCACGCACTGGCT...ATATGCTGGCTTTAAAACTGAAGTCAAAGTCTCAACCATCATGCTGTGTATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CCA 90 bp CCCTGGGACTGCCTACGAAGACGTAACGAGGTTAGAGAGGTGCTACTTGAATCGTACTCTTTCCATCTCTaGAAGATATCGAACTCCATG +
Preference number: 4 (lower is better)
Translates to: PWDCLRRRNEVREVLLESYSFHL*KISNSM
Trigger: CATGGAGTTCGATATCTTCCAGAGATGGAAAGAGTA...CGATTCAAGTAGCACCTCTCTAACCTCGTTACGTCTTCGTAGGCAGTCCCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CCA 90 bp GTCTTGCTGGTTTGCTTTATGTGGCCCCACTGGATAAATGACAAAACTATCAGGAGACGGAAGAAGGCATaGTGCTCCACTGCACACTTC +
Preference number: 4 (lower is better)
Translates to: VLLVCFMWPHWINDKTIRRRKKA*CSTAHF
Trigger: GAAGTGTGCAGTGGAGCACCATGCCTTCTTCCGTCT...CCTGATAGTTTTGTCATTTATCCAGTGGGGCCACATAAAGCAAACCAGCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR TCA 90 bp TCTGGATGCATGCTCTCACCCCAAATGAGAAGTGAAATCTTAACAGATCACAGAAGCCATCTCTTCCCCTaGCAACATGCATGTCCACTC +
Preference number: 4 (lower is better)
Translates to: SGCMLSPQMRSEILTDHRSHLFP*QHACPL
Trigger: GAGTGGACATGCATGTTGTCAGGGGAAGAGATGGCT...TCTGTGATCTGTTAAGATTTCACTTCTCATTTGGGGTGAGAGCATGCATCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CCA 90 bp TCAAAGGAGTTAAGTCTAGGATGGAACCCAGCCTCTACGCTGATCACACAGGGTAGATATCGAACTCCATaGCTTCTGTCTGATTTGGGA +
Preference number: 4 (lower is better)
Translates to: SKELSLGWNPASTLITQGRYRTP*LLSDLG
Trigger: TCCCAAATCAGACAGAAGCCATGGAGTTCGATATCT...ACCCTGTGTGATCAGCGTAGAGGCTGGGTTCCATCCTAGACTTAACTCCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR CAA 72 bp TCTAGAAACTTCCTATCAAACCCTGTCTCCACTGCATaGAGCAGTAGAAAAAGCTCTCGTGCTCAGGAGACG +
Preference number: 4 (lower is better)
Translates to: SRNFLSNPVSTA*SSRKSSRAQET
Trigger: CGTCTCCTGAGCACGAGAGCTTTTTCTACTGCTCAATGCAGTGGAGACAGGGTTTGATAGGAAGTTTCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp AGGATACACAGCATGATGGTTGAGACTTTGACTTCAGTTTTAAAGCCAGCATATTTTATGGGTTTCGCGTaGTCCAGCCAGTGCGTGACC +
Preference number: 4 (lower is better)
Translates to: RIHSMMVETLTSVLKPAYFMGFA*SSQCVT
Trigger: GGTCACGCACTGGCTGGATCACGCGAAACCCATAAA...ATATGCTGGCTTTAAAACTGAAGTCAAAGTCTCAACCATCATGCTGTGTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR TCA 90 bp CTGGGGATGAGAACACCTGCTGAACTGGAACACGCCTGTAAACATGCATCTTGTCTGAAGAATAGTATTTaGCTCGAAAGTGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: LGMRTPAELEHACKHASCLKNSI*LESARH
Trigger: ATGCCTTGCACTTTCGAGTCAAATACTATTCTTCAG...ACAAGATGCATGTTTACAGGCGTGTTCCAGTTCAGCAGGTGTTCTCATCCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR TCA 90 bp CTATATAAAAAGGGAGTTAAGTTTCTTCCAGGTCAGATCCTATCAACATGGTTAGGGACAGCGGGCTCTTaGCTTCTGACTTCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: LYKKGVKFLPGQILSTWLGTAGS*LLTSEA
Trigger: CGCCTCAGAAGTCAGAAGTCAAGAGCCCGCTGTCCC...TAACCATGTTGATAGGATCTGACCTGGAAGAAACTTAACTCCCTTTTTATATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp CATGCTGTACAGTCCCAGCTCTGTAATGATCATGTTAGCAGACTCTCTCCTCTCAGATATCGAACTCCATaGCTTCTGTCTGATTTGGGA +
Preference number: 4 (lower is better)
Translates to: HAVQSQLCNDHVSRLSPLRYRTP*LLSDLG
Trigger: TCCCAAATCAGACAGAAGCCATGGAGTTCGATATCT...GAGAGGAGAGAGTCTGCTAACATGATCATTACAGAGCTGGGACTGTACAGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp CTTGTGCAAGTGTGCAGAGGACTGATCCCCTCCTCCTCAAGAGACTTTCATAGATGTTTGCAGATGGAATaGTTACTGACATTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LVQVCRGLIPSSSRDFHRCLQME*LLTFGE
Trigger: CTCTCCAAATGTCAGTAACCATTCCATCTGCAAACA...TCTATGAAAGTCTCTTGAGGAGGAGGGGATCAGTCCTCTGCACACTTGCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR TCA 90 bp TCTGGATGCATGCTCTCACCCCAAATGAGAAGTGAAATCTTAACAGATCACAGATCCATGGCTTCTGTCTaGTTTGGGATGAACCGAAAC +
Preference number: 4 (lower is better)
Translates to: SGCMLSPQMRSEILTDHRSMASV*FGMNRN
Trigger: GTTTCGGTTCATCCCAAATCAGACAGAAGCCATGGA...TCTGTGATCTGTTAAGATTTCACTTCTCATTTGGGGTGAGAGCATGCATCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR TCA 90 bp TTTGCAGTAACATGCCATGACTTCCCAACTAAGAGTCTGAGGCCATGCTGTACATTATCAGCCTCGTTTTaGTTGGACGGTACATGCAAA +
Preference number: 4 (lower is better)
Translates to: FAVTCHDFPTKSLRPCCTLSASF*LDGTCK
Trigger: TTTGCATGTACCGTCCAATCAAAACGAGGCTGATAA...TGTACAGCATGGCCTCAGACTCTTAGTTGGGAAGTCATGGCATGTTACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR CAA 72 bp GTCCTATGTGCTAAGCTATTTTCCCAAGCTTTGGTCTaGCTGGTTTGCTTTATGTGGCCCCACTGGATAAAT +
Preference number: 4 (lower is better)
Translates to: VLCAKLFSQALV*LVCFMWPHWIN
Trigger: ATTTATCCAGTGGGGCCACATAAAGCAAACCAGCAAGACCAAAGCTTGGGAAAATAGCTTAGCACATAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
3UTR CAA 72 bp CAGCTCATAACTCATCACACGGAAAAGTGTTCAGCCTaGCTAGCAGTTCATCAAATCAGACAGCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: QLITHHTEKCSA*LAVHQIRQLLK
Trigger: CTTGAGAAGCTGTCTGATTTGATGAACTGCTAGCAAGGCTGAACACTTTTCCGTGTGATGAGTTATGAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
3UTR CAA 72 bp ATCCACAGTGGGTGGTTGTGTTACCCTCTAGTGCTGTaGTTTGGGTCTAAAGCAGACCAAGAAGGTAATAAT +
Preference number: 4 (lower is better)
Translates to: IHSGWLCYPLVL*FGSKADQEGNN
Trigger: ATTATTACCTTCTTGGTCTGCTTTAGACCCAAACAACAGCACTAGAGGGTAACACAACCACCCACTGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR TCA 90 bp CTATATAAAAAGGGAGTTAAGTTTCTTCCAGGTCAGATCCTATCAACATGGTTATTTATGGGTTTCGCGTaGTCCAGCCAGTGCGTGACC +
Preference number: 4 (lower is better)
Translates to: LYKKGVKFLPGQILSTWLFMGFA*SSQCVT
Trigger: GGTCACGCACTGGCTGGATCACGCGAAACCCATAAA...TAACCATGTTGATAGGATCTGACCTGGAAGAAACTTAACTCCCTTTTTATATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp CTATATAAAAAGGGAGTTAAGTTTCTTCCAGGTCAGATCCTATCAACATGGTTACGGAAGAAGGCATGGTaGTCCACTGCACACTTCCAC +
Preference number: 4 (lower is better)
Translates to: LYKKGVKFLPGQILSTWLRKKAW*STAHFH
Trigger: GTGGAAGTGTGCAGTGGAGCACCATGCCTTCTTCCG...TAACCATGTTGATAGGATCTGACCTGGAAGAAACTTAACTCCCTTTTTATATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp AGGATACACAGCATGATGGTTGAGACTTTGACTTCAGTTTTAAAGCCAGCATATTCCACCAGGTCCAAGTaGTACACAATCTGGTCGAAC +
Preference number: 4 (lower is better)
Translates to: RIHSMMVETLTSVLKPAYSTRSK*YTIWSN
Trigger: GTTCGACCAGATTGTGTACCACTTGGACCTGGTGGA...ATATGCTGGCTTTAAAACTGAAGTCAAAGTCTCAACCATCATGCTGTGTATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CCA 90 bp TTTGCAGTAACATGCCATGACTTCCCAACTAAGAGTCTGAGGCCATGCTGTACATACTCTTTCCATCTCTaGAAGATATCGAACTCCATG +
Preference number: 4 (lower is better)
Translates to: FAVTCHDFPTKSLRPCCTYSFHL*KISNSM
Trigger: CATGGAGTTCGATATCTTCCAGAGATGGAAAGAGTA...TGTACAGCATGGCCTCAGACTCTTAGTTGGGAAGTCATGGCATGTTACTGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp TCTGGATGCATGCTCTCACCCCAAATGAGAAGTGAAATCTTAACAGATCACAGACTTCAAAGATTAATATaGCTGTCGGGGTCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: SGCMLSPQMRSEILTDHRLQRLI*LSGSVQ
Trigger: TTGGACTGACCCCGACAGGCATATTAATCTTTGAAG...TCTGTGATCTGTTAAGATTTCACTTCTCATTTGGGGTGAGAGCATGCATCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR TCA 90 bp GGGGTTACTAACAGATACACACAGGTACCTCTGAATAGAAATCCCCTTTCATCTAAGGTTGTTTGGTTCTaGAGAATAGTATTTGACTCG +
Preference number: 4 (lower is better)
Translates to: GVTNRYTQVPLNRNPLSSKVVWF*RIVFDS
Trigger: CGAGTCAAATACTATTCTTCAGAACCAAACAACCTT...AGATGAAAGGGGATTTCTATTCAGAGGTACCTGTGTGTATCTGTTAGTAACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp GGGGTTACTAACAGATACACACAGGTACCTCTGAATAGAAATCCCCTTTCATCTTCATCAAAACTATACTaGCTTGTTAACCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: GVTNRYTQVPLNRNPLSSSSKLY*LVNLLT
Trigger: TGTGAGGAGGTTAACAAGGCAGTATAGTTTTGATGA...AGATGAAAGGGGATTTCTATTCAGAGGTACCTGTGTGTATCTGTTAGTAACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp CTATATAAAAAGGGAGTTAAGTTTCTTCCAGGTCAGATCCTATCAACATGGTTATCCTCTTTTCCAATCTaGGCATTCACACGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LYKKGVKFLPGQILSTWLSSFPI*AFTREA
Trigger: TGCCTCTCGTGTGAATGCCCAGATTGGAAAAGAGGA...TAACCATGTTGATAGGATCTGACCTGGAAGAAACTTAACTCCCTTTTTATATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CCA 90 bp CTATATAAAAAGGGAGTTAAGTTTCTTCCAGGTCAGATCCTATCAACATGGTTATCATCTGTTTCTTTATaGGTTTCGCGTGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: LYKKGVKFLPGQILSTWLSSVSL*VSRDPA
Trigger: GGCTGGATCACGCGAAACCCATAAAGAAACAGATGA...TAACCATGTTGATAGGATCTGACCTGGAAGAAACTTAACTCCCTTTTTATATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR GCA 90 bp CTATATAAAAAGGGAGTTAAGTTTCTTCCAGGTCAGATCCTATCAACATGGTTAGGCATTCTCCAGCTGTaGTTTCAAAATGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: LYKKGVKFLPGQILSTWLGILQL*FQNVAL
Trigger: AAGTGCAACATTTTGAAAGCACAGCTGGAGAATGCC...TAACCATGTTGATAGGATCTGACCTGGAAGAAACTTAACTCCCTTTTTATATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS TCA 90 bp CCTTGGCAGCTCCCGAGGCGGAGATGTGCACAGCCGCGCCGCCGGTaGGCAGGGGCCCGCCGCCGGCCGGGAATACGCTGCCCCCGGGCG +
Preference number: 5 (lower is better)
Translates to: PWQLPRRRCAQPRRR*AGARRRPGIRCPRA
Trigger: CGCCCGGGGGCAGCGTATTCCCGGCCGGCGGCGGGCCCCTGCTCACCGGCGGCGCGGCTGTGCACATCTCCGCCTCGGGAGCTGCCAAGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CCA 90 bp CGCTCACTTCGGTTCCGTCGAGCAGGAAGACACGGCAGTAAAGGGTaGCCTTGGCAGCTCCCGAGGCGGAGATGTGCACAGCCGCGCCGC +
Preference number: 5 (lower is better)
Translates to: RSLRFRRAGRHGSKG*PWQLPRRRCAQPRR
Trigger: GCGGCGCGGCTGTGCACATCTCCGCCTCGGGAGCTGCCAAGGCCACCCTTTACTGCCGTGTCTTCCTGCTCGACGGAACCGAAGTGAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp GGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGTGGTCAGAGGGACTCTaGGCCCCTGGGGACAGCGGG +
Preference number: 5 (lower is better)
Translates to: GKEADEGTMPSPGSKGGVWSEGL*APGDSG
Trigger: CCCGCTGTCCCCAGGGGCCAAGAGTCCCTCTGACCA...CACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS TCA 90 bp AGCGTTCGGGGACCTCAGCGGCGCCTCCTTATTCTCCAGGGTCAGTaGAAGGCCGTAGTTGGAGTGGTGCTGGTGCTGATGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SVRGPQRRLLILQGQ*KAVVGVVLVLMLVV
Trigger: CACCACCAGCATCAGCACCAGCACCACTCCAACTACGGCCTTTCACTGACCCTGGAGAATAAGGAGGCGCCGCTGAGGTCCCCGAACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp TTGTGCTCAGGTTTGCAGGGATGTCCACCCACTGAGACTCTTGTGAGCCCAAGGTGGTCAGAGGGACTCTaGGCCCCTGGGGACAGCGGG +
Preference number: 5 (lower is better)
Translates to: LCSGLQGCPPTETLVSPRWSEGL*APGDSG
Trigger: CCCGCTGTCCCCAGGGGCCAAGAGTCCCTCTGACCA...CCTTGGGCTCACAAGAGTCTCAGTGGGTGGACATCCCTGCAAACCTGAGCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS GCA 90 bp GCGGACTTGCTGTTGCTGGGTGTGCGCAGACGGAAGAAGGCATGGTaGTCCACTGCACACTTCCACAAGTGCTTGCAGGTACGCGCACTG +
Preference number: 5 (lower is better)
Translates to: ADLLLLGVRRRKKAW*STAHFHKCLQVRAL
Trigger: CAGTGCGCGTACCTGCAAGCACTTGTGGAAGTGTGCAGTGGAGCACCATGCCTTCTTCCGTCTGCGCACACCCAGCAACAGCAAGTCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CCA 90 bp CTGGCGGACTTGCTGTTGCTGGGTGTGCGCAGACGGAAGAAGGCATaGTGCTCCACTGCACACTTCCACAAGTGCTTGCAGGTACGCGCA +
Preference number: 5 (lower is better)
Translates to: LADLLLLGVRRRKKA*CSTAHFHKCLQVRA
Trigger: TGCGCGTACCTGCAAGCACTTGTGGAAGTGTGCAGTGGAGCACCATGCCTTCTTCCGTCTGCGCACACCCAGCAACAGCAAGTCCGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CCA 90 bp CTCCTCACACGGGGAGGCTTGATTTCCGGCTTCTCCACAGCTGGCTaGGCGGCTTCCACGCGGATAGGAATGGGGCTTCTGACATTGGTA +
Preference number: 5 (lower is better)
Translates to: LLTRGGLISGFSTAG*AASTRIGMGLLTLV
Trigger: TACCAATGTCAGAAGCCCCATTCCTATCCGCGTGGAAGCCGCCCAGCCAGCTGTGGAGAAGCCGGAAATCAAGCCTCCCCGTGTGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGCTCACACGGGGAGGCTaGATTTCCGGCTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: EERKRTKAPCHLQAARVELTRGG*ISGFST
Trigger: TGTGGAGAAGCCGGAAATCAAGCCTCCCCGTGTGAG...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp GGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGGCCGCAGGGTCACTGTaGGAATCAACGGGGAAGACT +
Preference number: 5 (lower is better)
Translates to: GKEADEGTMPSPGSKGGVAAGSL*ESTGKT
Trigger: AGTCTTCCCCGTTGATTCCAACAGTGACCCTGCGGC...CACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS GCA 90 bp CGCAGACGGAAGAAGGCATGGTGCTCCACTGCACACTTCCACAAGTaGTTGCAGGTACGCGCACTGTCCAGCCTGAACACGAAGGTGTGC +
Preference number: 5 (lower is better)
Translates to: RRRKKAWCSTAHFHK*LQVRALSSLNTKVC
Trigger: GCACACCTTCGTGTTCAGGCTGGACAGTGCGCGTACCTGCAAGCACTTGTGGAAGTGTGCAGTGGAGCACCATGCCTTCTTCCGTCTGCG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CCA 90 bp CCGGGAGGTATAGATGGTCTGTACTGTGGCCACAGTCTCTGTCAGTaGCCGCAGGGTCACTGTTGGAATCAACGGGGAAGACTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PGGIDGLYCGHSLCQ*PQGHCWNQRGRLAR
Trigger: CCTGGCCAGTCTTCCCCGTTGATTCCAACAGTGACCCTGCGGCCACTGACAGAGACTGTGGCCACAGTACAGACCATCTATACCTCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS CCA 90 bp TCTCTGCACTGGTTGCCAGAGAGACGGGCTTCCGGGAGGTATAGATaGTCTGTACTGTGGCCACAGTCTCTGTCAGTGGCCGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: SLHWLPERRASGRYR*SVLWPQSLSVAAGS
Trigger: TGACCCTGCGGCCACTGACAGAGACTGTGGCCACAGTACAGACCATCTATACCTCCCGGAAGCCCGTCTCTCTGGCAACCAGTGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp AGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTCTCACACGGGGAGGCTaGATTTCCGGCTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: RKGSGRRHHAISRQQGWSLTRGG*ISGFST
Trigger: TGTGGAGAAGCCGGAAATCAAGCCTCCCCGTGTGAG...ACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGCTGACTTTCTGGATTTaGGGGGACGCCAGTGACACC +
Preference number: 5 (lower is better)
Translates to: EERKRTKAPCHLQAARVELTFWI*GDASDT
Trigger: GGTGTCACTGGCGTCCCCCAAAATCCAGAAAGTCAG...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp AGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTGCCGCAGGGTCACTGTaGGAATCAACGGGGAAGACT +
Preference number: 5 (lower is better)
Translates to: RKGSGRRHHAISRQQGWSAAGSL*ESTGKT
Trigger: AGTCTTCCCCGTTGATTCCAACAGTGACCCTGCGGC...ACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS TCA 90 bp CTCTCAAAGGTGCTGGTTCTTCGCAATCTGGAGCCGTGTGTAGCTTaGTATTCCGTCCGTCCACTGAACCGGAAGCGGGAACCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: LSKVLVLRNLEPCVA*YSVRPLNRKREPSR
Trigger: CCGGCTGGGTTCCCGCTTCCGGTTCAGTGGACGGACGGAATATCAAGCTACACACGGCTCCAGATTGCGAAGAACCAGCACCTTTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS TCA 90 bp CTGCACACTTCCACAAGTGCTTGCAGGTACGCGCACTGTCCAGCCTaGACACGAAGGTGTGCTCTTGCTCACGCCCCTGGTCATCATCTT +
Preference number: 5 (lower is better)
Translates to: LHTSTSACRYAHCPA*TRRCALAHAPGHHL
Trigger: AAGATGATGACCAGGGGCGTGAGCAAGAGCACACCTTCGTGTTCAGGCTGGACAGTGCGCGTACCTGCAAGCACTTGTGGAAGTGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS TCA 90 bp CATCAAAACTATACTGCCTTGTTAACCTCCTCACACGGGGAGGCTTaGTTTCCGGCTTCTCCACAGCTGGCTGGGCGGCTTCCACGCGGA +
Preference number: 5 (lower is better)
Translates to: HQNYTALLTSSHGEA*FPASPQLAGRLPRG
Trigger: TCCGCGTGGAAGCCGCCCAGCCAGCTGTGGAGAAGCCGGAAATCAAGCCTCCCCGTGTGAGGAGGTTAACAAGGCAGTATAGTTTTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS GCA 90 bp TTGCAGGTACGCGCACTGTCCAGCCTGAACACGAAGGTGTGCTCTTaGTCACGCCCCTGGTCATCATCTTCCACTACTACGAGGGTCAGT +
Preference number: 5 (lower is better)
Translates to: LQVRALSSLNTKVCS*SRPWSSSSTTTRVS
Trigger: ACTGACCCTCGTAGTAGTGGAAGATGATGACCAGGGGCGTGAGCAAGAGCACACCTTCGTGTTCAGGCTGGACAGTGCGCGTACCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp AGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTAACAAATCCTGGCCTTaGGCATGTTTCGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RKGSGRRHHAISRQQGWSNKSWP*ACFGRS
Trigger: GGACCTGCCGAAACATGCCAAAGGCCAGGATTTGTT...ACTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS TCA 90 bp GAGCTGACTTTCTGGATTTTGGGGGACGCCAGTGACACCGAAACTTaGGTGGCAGACATCGTGGTGGTGGTGGTGGTTGTGGTTGTGGCT +
Preference number: 5 (lower is better)
Translates to: ELTFWILGDASDTET*VADIVVVVVVVVVA
Trigger: AGCCACAACCACAACCACCACCACCACCACGATGTCTGCCACTCAAGTTTCGGTGTCACTGGCGTCCCCCAAAATCCAGAAAGTCAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS GCA 90 bp CATCTTCTCTCTTTCCAGTTCCTGCCGGAGCGTCTCTGCACTGGTTaGCAGAGAGACGGGCTTCCGGGAGGTATAGATGGTCTGTACTGT +
Preference number: 5 (lower is better)
Translates to: HLLSFQFLPERLCTG*QRDGLPGGIDGLYC
Trigger: ACAGTACAGACCATCTATACCTCCCGGAAGCCCGTCTCTCTGGCAACCAGTGCAGAGACGCTCCGGCAGGAACTGGAAAGAGAGAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGCAAAACTATACTGCCTaGTTAACCTCCTCACACGGG +
Preference number: 5 (lower is better)
Translates to: EERKRTKAPCHLQAARVEQNYTA*LTSSHG
Trigger: CCCGTGTGAGGAGGTTAACAAGGCAGTATAGTTTTG...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS GCA 90 bp GGGCATTCACACGAGAGGCATTCTCCAGCTGTGCTTTCAAAATGTTaGACTTCACATGATCTGCTACGGGCGAAGGCAGCAGCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: GHSHERHSPAVLSKC*TSHDLLRAKAAAGS
Trigger: AGACCCCGCTGCTGCCTTCGCCCGTAGCAGATCATGTGAAGTGCAACATTTTGAAAGCACAGCTGGAGAATGCCTCTCGTGTGAATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS CCA 90 bp TCATCATCTTCTCTCTTTCCAGTTCCTGCCGGAGCGTCTCTGCACTaGTTGCCAGAGAGACGGGCTTCCGGGAGGTATAGATGGTCTGTA +
Preference number: 5 (lower is better)
Translates to: SSSSLFPVPAGASLH*LPERRASGRYRWSV
Trigger: TACAGACCATCTATACCTCCCGGAAGCCCGTCTCTCTGGCAACCAGTGCAGAGACGCTCCGGCAGGAACTGGAAAGAGAGAAGATGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGGGACAACACTGTAATTaGTTCTCTCTAAAGTCTGCC +
Preference number: 5 (lower is better)
Translates to: EERKRTKAPCHLQAARVEGQHCN*FSLKSA
Trigger: GGCAGACTTTAGAGAGAACAAATTACAGTGTTGTCC...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044022.5
CDS-3UTR CAA 90 bp GAGGAAAGGAAGCGGACGAAGGCACCATGCCATCTCCAGGCAGCAAGGGTGGAGTTCTTTTCCTCAGCCTaGTTGATGTTGATATGCAGG +
Preference number: 5 (lower is better)
Translates to: EERKRTKAPCHLQAARVEFFSSA*LMLICR
Trigger: CCTGCATATCAACATCAACAAGGCTGAGGAAAAGAA...CTCCACCCTTGCTGCCTGGAGATGGCATGGTGCCTTCGTCCGCTTCCTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS CCA 90 bp GTGGACTTCAGGATTTGCTTTAGAGCAGAGCTGAGCAGCAATTACTaGGTTGCTCGCTTTGAATGTGGAATGTCGCCGGGACGGGTAACG +
Preference number: 5 (lower is better)
Translates to: VDFRICFRAELSSNY*VARFECGMSPGRVT
Trigger: CGTTACCCGTCCCGGCGACATTCCACATTCAAAGCGAGCAACCCAGTAATTGCTGCTCAGCTCTGCTCTAAAGCAAATCCTGAAGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CCA 90 bp TCTGGTTCTGGTCCTGGACATAGTCAAAGTGGCTGCCATCTCCACTaGCTGAGGTTTTCCAGTGTGGCCTGTCATCCTGAAAACATGGCT +
Preference number: 5 (lower is better)
Translates to: SGSGPGHSQSGCHLH*LRFSSVACHPENMA
Trigger: AGCCATGTTTTCAGGATGACAGGCCACACTGGAAAACCTCAGCCAGTGGAGATGGCAGCCACTTTGACTATGTCCAGGACCAGAACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS CCA 90 bp TCTGTCAGTGGCCGCAGGGTCACTGTTGGAATCAACGGGGAAGACTaGCCAGGACAACACTGTAATTTGTTCTCTCTAAAGTCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: SVSGRRVTVGINGED*PGQHCNLFSLKSAG
Trigger: CCCTGCAGACTTTAGAGAGAACAAATTACAGTGTTGTCCTGGCCAGTCTTCCCCGTTGATTCCAACAGTGACCCTGCGGCCACTGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp GAAGGTAATAATTGCACAACTCCTTATAGTCACTGTGAGCTCCCCCAGGGCAGCCTGACTTTCTGGATTTaGGGGGACGCCAGTGACACC +
Preference number: 5 (lower is better)
Translates to: EGNNCTTPYSHCELPQGSLTFWI*GDASDT
Trigger: GGTGTCACTGGCGTCCCCCAAAATCCAGAAAGTCAG...GCTGCCCTGGGGGAGCTCACAGTGACTATAAGGAGTTGTGCAATTATTACCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS TCA 90 bp ATCTCTGGAAGATATCGAACTCCATGGCTTCTGTCTGATTTGGGATaGACCGAAACTCAGACACAAGCTCGGGCGTGTGTTCCGGGAGCT +
Preference number: 5 (lower is better)
Translates to: ISGRYRTPWLLSDLG*TETQTQARACVPGA
Trigger: AGCTCCCGGAACACACGCCCGAGCTTGTGTCTGAGTTTCGGTTCATCCCAAATCAGACAGAAGCCATGGAGTTCGATATCTTCCAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS TCA 90 bp GTTCTGGTCCTGGACATAGTCAAAGTGGCTGCCATCTCCACTGGCTaGGGTTTTCCAGTGTGGCCTGTCATCCTGAAAACATGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: VLVLDIVKVAAISTG*GFPVWPVILKTWLV
Trigger: AACAAGCCATGTTTTCAGGATGACAGGCCACACTGGAAAACCTCAGCCAGTGGAGATGGCAGCCACTTTGACTATGTCCAGGACCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS CCA 90 bp TCTGTCAGTGGCCGCAGGGTCACTGTTGGAATCAACGGGGAAGACTaGCCAGGACAACACTGTAATTTGTTCTCTCTAAAGTCTGCCAGA +
Preference number: 5 (lower is better)
Translates to: SVSGRRVTVGINGED*PGQHCNLFSLKSAR
Trigger: TCTGGCAGACTTTAGAGAGAACAAATTACAGTGTTGTCCTGGCCAGTCTTCCCCGTTGATTCCAACAGTGACCCTGCGGCCACTGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044022.5
CDS-3UTR CAA 90 bp AGAAACACAAACAGAAGAGCACCCTGGGACTGCCTACGAAGACGTAACGAGGTTAACAAATCCTGGCCTTaGGCATGTTTCGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RNTNRRAPWDCLRRRNEVNKSWP*ACFGRS
Trigger: GGACCTGCCGAAACATGCCAAAGGCCAGGATTTGTT...AACCTCGTTACGTCTTCGTAGGCAGTCCCAGGGTGCTCTTCTGTTTGTGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS CCA 90 bp TTTCCATCTCTGGAAGATATCGAACTCCATGGCTTCTGTCTGATTTaGGATGAACCGAAACTCAGACACAAGCTCGGGCGTGTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: FPSLEDIELHGFCLI*DEPKLRHKLGRVFR
Trigger: CCGGAACACACGCCCGAGCTTGTGTCTGAGTTTCGGTTCATCCCAAATCAGACAGAAGCCATGGAGTTCGATATCTTCCAGAGATGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp AGGATACACAGCATGATGGTTGAGACTTTGACTTCAGTTTTAAAGCCAGCATATCTGGCGGACTTGCTGTaGCTGGGTGTGCGCAGACGG +
Preference number: 5 (lower is better)
Translates to: RIHSMMVETLTSVLKPAYLADLL*LGVRRR
Trigger: CCGTCTGCGCACACCCAGCAACAGCAAGTCCGCCAG...ATATGCTGGCTTTAAAACTGAAGTCAAAGTCTCAACCATCATGCTGTGTATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CAA 90 bp GCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTTTTTCCTCAGCCTTGTaGATGTTGATATGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: AAAGLAGGDNPVFYRNMVFSSAL*MLICRA
Trigger: TGCCCTGCATATCAACATCAACAAGGCTGAGGAAAA...AACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS GCA 90 bp CTCTTTTCCAATCTGGGCATTCACACGAGAGGCATTCTCCAGCTGTaGTTTCAAAATGTTGCACTTCACATGATCTGCTACGGGCGAAGG +
Preference number: 5 (lower is better)
Translates to: LFSNLGIHTRGILQL*FQNVALHMICYGRR
Trigger: CCTTCGCCCGTAGCAGATCATGTGAAGTGCAACATTTTGAAAGCACAGCTGGAGAATGCCTCTCGTGTGAATGCCCAGATTGGAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp GCAGCTGCTGGGTTGGCAGGAGGTGACAACCCTGTGTTCTATAGGAACATGGTTTTTATCAGCCTCGTTTaGATTGGACGGTACATGCAA +
Preference number: 5 (lower is better)
Translates to: AAAGLAGGDNPVFYRNMVFISLV*IGRYMQ
Trigger: TTGCATGTACCGTCCAATCAAAACGAGGCTGATAAA...AACCATGTTCCTATAGAACACAGGGTTGTCACCTCCTGCCAACCCAGCAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp TTTGCAGTAACATGCCATGACTTCCCAACTAAGAGTCTGAGGCCATGCTGTACACAAAACTATACTGCCTaGTTAACCTCCTCACACGGG +
Preference number: 5 (lower is better)
Translates to: FAVTCHDFPTKSLRPCCTQNYTA*LTSSHG
Trigger: CCCGTGTGAGGAGGTTAACAAGGCAGTATAGTTTTG...TGTACAGCATGGCCTCAGACTCTTAGTTGGGAAGTCATGGCATGTTACTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp GAAGGTAATAATTGCACAACTCCTTATAGTCACTGTGAGCTCCCCCAGGGCAGCCCTCTCGAAGGTTGTTaGGTTCTGAAGAATAGTATT +
Preference number: 5 (lower is better)
Translates to: EGNNCTTPYSHCELPQGSPLEGC*VLKNSI
Trigger: AATACTATTCTTCAGAACCAAACAACCTTCGAGAGG...GCTGCCCTGGGGGAGCTCACAGTGACTATAAGGAGTTGTGCAATTATTACCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp GCTAAGCTATTTTCCCAAGCTTTGGTCTTGCTGGTTTGCTTTATGTGGCCCCACCATGGCTTGTTTTGTTaGCAGATGGAATGGTTACTG +
Preference number: 5 (lower is better)
Translates to: AKLFSQALVLLVCFMWPHHGLFC*QMEWLL
Trigger: CAGTAACCATTCCATCTGCAAACAAAACAAGCCATG...GTGGGGCCACATAAAGCAAACCAGCAAGACCAAAGCTTGGGAAAATAGCTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS-3UTR CAA 90 bp TGCACAGAAACACAAACAGAAGAGCACCCTGGGACTGCCTACGAAGACGTAACGAAAACATGGCTTGTTTaGTTTGCAGATGGAATGGTT +
Preference number: 5 (lower is better)
Translates to: CTETQTEEHPGTAYEDVTKTWLV*FADGMV
Trigger: AACCATTCCATCTGCAAACAAAACAAGCCATGTTTT...CGTTACGTCTTCGTAGGCAGTCCCAGGGTGCTCTTCTGTTTGTGTTTCTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS TCA 90 bp AACAAACAGGTACCTTGTAAATTCCTCTCGAAGGTTGTTTGGTTCTaGAGAATAGTATTTGACTCGAAAGTGCAAGGCATAGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: NKQVPCKFLSKVVWF*RIVFDSKVQGIGRS
Trigger: GGACCTGCCTATGCCTTGCACTTTCGAGTCAAATACTATTCTTCAGAACCAAACAACCTTCGAGAGGAATTTACAAGGTACCTGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS-3UTR CAA 90 bp CTAAAAAGGCCAGATTTTAGCAAGAGAAGATGTTATACACATGCCCAAAGGGCTCCTCTCGAAGGTTGTTaGGTTCTGAAGAATAGTATT +
Preference number: 5 (lower is better)
Translates to: LKRPDFSKRRCYTHAQRAPLEGC*VLKNSI
Trigger: AATACTATTCTTCAGAACCAAACAACCTTCGAGAGG...AGCCCTTTGGGCATGTGTATAACATCTTCTCTTGCTAAAATCTGGCCTTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS TCA 72 bp CTCCCGAGGCGGAGATGTGCACAGCCGCGCCGCCGGTaGGCAGGGGCCCGCCGCCGGCCGGGAATACGCTGC +
Preference number: 6 (lower is better)
Translates to: LPRRRCAQPRRR*AGARRRPGIRC
Trigger: GCAGCGTATTCCCGGCCGGCGGCGGGCCCCTGCTCACCGGCGGCGCGGCTGTGCACATCTCCGCCTCGGGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CCA 72 bp CGTCGAGCAGGAAGACACGGCAGTAAAGGGTGGCCTTaGCAGCTCCCGAGGCGGAGATGTGCACAGCCGCGC +
Preference number: 6 (lower is better)
Translates to: RRAGRHGSKGWP*QLPRRRCAQPR
Trigger: GCGCGGCTGTGCACATCTCCGCCTCGGGAGCTGCCAAGGCCACCCTTTACTGCCGTGTCTTCCTGCTCGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CAA 72 bp CCCAGGGTCAGGGAGCCTCCGTGGTCAGAGGGACTCTaGGCCCCTGGGGACAGCGGGCTCTTGACTTCTGAC +
Preference number: 6 (lower is better)
Translates to: PRVREPPWSEGL*APGDSGLLTSD
Trigger: GTCAGAAGTCAAGAGCCCGCTGTCCCCAGGGGCCAAGAGTCCCTCTGACCACGGAGGCTCCCTGACCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS CAA 90 bp TGTGCAGCTGCTTCGCTGTACAGGGCTGGCGTGCCTGGACTCAGTTaGGTGAGGGCCTTGCTAGCGTTCGGGGACCTCAGCGGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: CAAASLYRAGVPGLS*VRALLAFGDLSGAS
Trigger: GGAGGCGCCGCTGAGGTCCCCGAACGCTAGCAAGGCCCTCACCAAACTGAGTCCAGGCACGCCAGCCCTGTACAGCGAAGCAGCTGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS CAA 72 bp AGGGCTGGCGTGCCTGGACTCAGTTTGGTGAGGGCCTaGCTAGCGTTCGGGGACCTCAGCGGCGCCTCCTTA +
Preference number: 6 (lower is better)
Translates to: RAGVPGLSLVRA*LAFGDLSGASL
Trigger: TAAGGAGGCGCCGCTGAGGTCCCCGAACGCTAGCAAGGCCCTCACCAAACTGAGTCCAGGCACGCCAGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS CCA 72 bp CGGTTCCGTCGAGCAGGAAGACACGGCAGTAAAGGGTaGCCTTGGCAGCTCCCGAGGCGGAGATGTGCACAG +
Preference number: 6 (lower is better)
Translates to: RFRRAGRHGSKG*PWQLPRRRCAQ
Trigger: CTGTGCACATCTCCGCCTCGGGAGCTGCCAAGGCCACCCTTTACTGCCGTGTCTTCCTGCTCGACGGAACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CCA 72 bp CGGGGAGGCTTGATTTCCGGCTTCTCCACAGCTGGCTaGGCGGCTTCCACGCGGATAGGAATGGGGCTTCTG +
Preference number: 6 (lower is better)
Translates to: RGGLISGFSTAG*AASTRIGMGLL
Trigger: CAGAAGCCCCATTCCTATCCGCGTGGAAGCCGCCCAGCCAGCTGTGGAGAAGCCGGAAATCAAGCCTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS CCA 72 bp CACACGGGGAGGCTTGATTTCCGGCTTCTCCACAGCTaGCTGGGCGGCTTCCACGCGGATAGGAATGGGGCT +
Preference number: 6 (lower is better)
Translates to: HTGRLDFRLLHS*LGGFHADRNGA
Trigger: AGCCCCATTCCTATCCGCGTGGAAGCCGCCCAGCCAGCTGTGGAGAAGCCGGAAATCAAGCCTCCCCGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS CAA 72 bp GCTTCGCTGTACAGGGCTGGCGTGCCTGGACTCAGTTaGGTGAGGGCCTTGCTAGCGTTCGGGGACCTCAGC +
Preference number: 6 (lower is better)
Translates to: ASLYRAGVPGLS*VRALLAFGDLS
Trigger: GCTGAGGTCCCCGAACGCTAGCAAGGCCCTCACCAAACTGAGTCCAGGCACGCCAGCCCTGTACAGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS CAA 90 bp TCGCTGTACAGGGCTGGCGTGCCTGGACTCAGTTTGGTGAGGGCCTaGCTAGCGTTCGGGGACCTCAGCGGCGCCTCCTTATTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SLYRAGVPGLSLVRA*LAFGDLSGASLFSR
Trigger: CCTGGAGAATAAGGAGGCGCCGCTGAGGTCCCCGAACGCTAGCAAGGCCCTCACCAAACTGAGTCCAGGCACGCCAGCCCTGTACAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS GCA 72 bp CACGGTCTCCAGCTCCAGCTTCTTCAGATGTGCAGCTaGTTCGCTGTACAGGGCTGGCGTGCCTGGACTCAG +
Preference number: 6 (lower is better)
Translates to: HGLQLQLLQMCS*FAVQGWRAWTQ
Trigger: CTGAGTCCAGGCACGCCAGCCCTGTACAGCGAAGCAGCTGCACATCTGAAGAAGCTGGAGCTGGAGACCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS CCA 72 bp ATGTGCAGCTGCTTCGCTGTACAGGGCTGGCGTGCCTaGACTCAGTTTGGTGAGGGCCTTGCTAGCGTTCGG +
Preference number: 6 (lower is better)
Translates to: MCSCFAVQGWRA*TQFGEGLASVR
Trigger: CCGAACGCTAGCAAGGCCCTCACCAAACTGAGTCCAGGCACGCCAGCCCTGTACAGCGAAGCAGCTGCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS CAA 72 bp CCCAGCCGGATGAAGTCAGATCTGGCGGACTTGCTGTaGCTGGGTGTGCGCAGACGGAAGAAGGCATGGTGC +
Preference number: 6 (lower is better)
Translates to: PSRMKSDLADLL*LGVRRRKKAWC
Trigger: GCACCATGCCTTCTTCCGTCTGCGCACACCCAGCAACAGCAAGTCCGCCAGATCTGACTTCATCCGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CAA 90 bp AAGCGGGAACCCAGCCGGATGAAGTCAGATCTGGCGGACTTGCTGTaGCTGGGTGTGCGCAGACGGAAGAAGGCATGGTGCTCCACTGCA +
Preference number: 6 (lower is better)
Translates to: KREPSRMKSDLADLL*LGVRRRKKAWCSTA
Trigger: TGCAGTGGAGCACCATGCCTTCTTCCGTCTGCGCACACCCAGCAACAGCAAGTCCGCCAGATCTGACTTCATCCGGCTGGGTTCCCGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS TCA 72 bp TCCACAAGTGCTTGCAGGTACGCGCACTGTCCAGCCTaGACACGAAGGTGTGCTCTTGCTCACGCCCCTGGT +
Preference number: 6 (lower is better)
Translates to: STSACRYAHCPA*TRRCALAHAPG
Trigger: ACCAGGGGCGTGAGCAAGAGCACACCTTCGTGTTCAGGCTGGACAGTGCGCGTACCTGCAAGCACTTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS TCA 72 bp GGACCTCAGCGGCGCCTCCTTATTCTCCAGGGTCAGTaGAAGGCCGTAGTTGGAGTGGTGCTGGTGCTGATG +
Preference number: 6 (lower is better)
Translates to: GPQRRLLILQGQ*KAVVGVVLVLM
Trigger: CATCAGCACCAGCACCACTCCAACTACGGCCTTTCACTGACCCTGGAGAATAAGGAGGCGCCGCTGAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS CCA 72 bp AGACGGGCTTCCGGGAGGTATAGATGGTCTGTACTGTaGCCACAGTCTCTGTCAGTGGCCGCAGGGTCACTG +
Preference number: 6 (lower is better)
Translates to: RRASGRYRWSVL*PQSLSVAAGSL
Trigger: CAGTGACCCTGCGGCCACTGACAGAGACTGTGGCCACAGTACAGACCATCTATACCTCCCGGAAGCCCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS CAA 72 bp CTCTTTCCAGTTCCTGCCGGAGCGTCTCTGCACTGGTaGCCAGAGAGACGGGCTTCCGGGAGGTATAGATGG +
Preference number: 6 (lower is better)
Translates to: LFPVPAGASLHW*PERRASGRYRW
Trigger: CCATCTATACCTCCCGGAAGCCCGTCTCTCTGGCAACCAGTGCAGAGACGCTCCGGCAGGAACTGGAAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS CAA 90 bp CTTGCAGGTACGCGCACTGTCCAGCCTGAACACGAAGGTGTGCTCTaGCTCACGCCCCTGGTCATCATCTTCCACTACTACGAGGGTCAG +
Preference number: 6 (lower is better)
Translates to: LAGTRTVQPEHEGVL*LTPLVIIFHYYEGQ
Trigger: CTGACCCTCGTAGTAGTGGAAGATGATGACCAGGGGCGTGAGCAAGAGCACACCTTCGTGTTCAGGCTGGACAGTGCGCGTACCTGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CAA 90 bp CCTCTCAAAGGTGCTGGTTCTTCGCAATCTGGAGCCGTGTGTAGCTaGATATTCCGTCCGTCCACTGAACCGGAAGCGGGAACCCAGCCG +
Preference number: 6 (lower is better)
Translates to: PLKGAGSSQSGAVCS*IFRPSTEPEAGTQP
Trigger: CGGCTGGGTTCCCGCTTCCGGTTCAGTGGACGGACGGAATATCAAGCTACACACGGCTCCAGATTGCGAAGAACCAGCACCTTTGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS GCA 72 bp CAGGTACGCGCACTGTCCAGCCTGAACACGAAGGTGTaGTCTTGCTCACGCCCCTGGTCATCATCTTCCACT +
Preference number: 6 (lower is better)
Translates to: QVRALSSLNTKV*SCSRPWSSSST
Trigger: AGTGGAAGATGATGACCAGGGGCGTGAGCAAGAGCACACCTTCGTGTTCAGGCTGGACAGTGCGCGTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS GCA 72 bp TCTTTCCAGTTCCTGCCGGAGCGTCTCTGCACTGGTTaGCAGAGAGACGGGCTTCCGGGAGGTATAGATGGT +
Preference number: 6 (lower is better)
Translates to: SFQFLPERLCTG*QRDGLPGGIDG
Trigger: ACCATCTATACCTCCCGGAAGCCCGTCTCTCTGGCAACCAGTGCAGAGACGCTCCGGCAGGAACTGGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS CCA 72 bp ACGCCAGTGACACCGAAACTTGAGTGGCAGACATCGTaGTGGTGGTGGTGGTTGTGGTTGTGGCTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: TPVTPKLEWQTS*WWWWLWLWLWW
Trigger: CCACCACAGCCACAACCACAACCACCACCACCACCACGATGTCTGCCACTCAAGTTTCGGTGTCACTGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS CCA 72 bp TCTCTCTTTCCAGTTCCTGCCGGAGCGTCTCTGCACTaGTTGCCAGAGAGACGGGCTTCCGGGAGGTATAGA +
Preference number: 6 (lower is better)
Translates to: SLFPVPAGASLH*LPERRASGRYR
Trigger: TCTATACCTCCCGGAAGCCCGTCTCTCTGGCAACCAGTGCAGAGACGCTCCGGCAGGAACTGGAAAGAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS CCA 72 bp CTTCTTCAGATGTGCAGCTGCTTCGCTGTACAGGGCTaGCGTGCCTGGACTCAGTTTGGTGAGGGCCTTGCT +
Preference number: 6 (lower is better)
Translates to: LLQMCSCFAVQG*RAWTQFGEGLA
Trigger: AGCAAGGCCCTCACCAAACTGAGTCCAGGCACGCCAGCCCTGTACAGCGAAGCAGCTGCACATCTGAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS CAA 72 bp CTATACTGCCTTGTTAACCTCCTCACACGGGGAGGCTaGATTTCCGGCTTCTCCACAGCTGGCTGGGCGGCT +
Preference number: 6 (lower is better)
Translates to: LYCLVNLLTRGG*ISGFSTAGWAA
Trigger: AGCCGCCCAGCCAGCTGTGGAGAAGCCGGAAATCAAGCCTCCCCGTGTGAGGAGGTTAACAAGGCAGTATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS CAA 90 bp AGACGGAAGAAGGCATGGTGCTCCACTGCACACTTCCACAAGTGCTaGCAGGTACGCGCACTGTCCAGCCTGAACACGAAGGTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: RRKKAWCSTAHFHKC*QVRALSSLNTKVCS
Trigger: AGAGCACACCTTCGTGTTCAGGCTGGACAGTGCGCGTACCTGCAAGCACTTGTGGAAGTGTGCAGTGGAGCACCATGCCTTCTTCCGTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CAA 90 bp TCATCAAAACTATACTGCCTTGTTAACCTCCTCACACGGGGAGGCTaGATTTCCGGCTTCTCCACAGCTGGCTGGGCGGCTTCCACGCGG +
Preference number: 6 (lower is better)
Translates to: SSKLYCLVNLLTRGG*ISGFSTAGWAASTR
Trigger: CCGCGTGGAAGCCGCCCAGCCAGCTGTGGAGAAGCCGGAAATCAAGCCTCCCCGTGTGAGGAGGTTAACAAGGCAGTATAGTTTTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS TCA 72 bp TATACTGCCTTGTTAACCTCCTCACACGGGGAGGCTTaGTTTCCGGCTTCTCCACAGCTGGCTGGGCGGCTT +
Preference number: 6 (lower is better)
Translates to: YTALLTSSHGEA*FPASPQLAGRL
Trigger: AAGCCGCCCAGCCAGCTGTGGAGAAGCCGGAAATCAAGCCTCCCCGTGTGAGGAGGTTAACAAGGCAGTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS GCA 72 bp AAGAAGGCATGGTGCTCCACTGCACACTTCCACAAGTaGTTGCAGGTACGCGCACTGTCCAGCCTGAACACG +
Preference number: 6 (lower is better)
Translates to: KKAWCSTAHFHK*LQVRALSSLNT
Trigger: CGTGTTCAGGCTGGACAGTGCGCGTACCTGCAAGCACTTGTGGAAGTGTGCAGTGGAGCACCATGCCTTCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS GCA 72 bp CTGTTGCTGGGTGTGCGCAGACGGAAGAAGGCATGGTaGTCCACTGCACACTTCCACAAGTGCTTGCAGGTA +
Preference number: 6 (lower is better)
Translates to: LLLGVRRRKKAW*STAHFHKCLQV
Trigger: TACCTGCAAGCACTTGTGGAAGTGTGCAGTGGAGCACCATGCCTTCTTCCGTCTGCGCACACCCAGCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CCA 72 bp TTGCTGTTGCTGGGTGTGCGCAGACGGAAGAAGGCATaGTGCTCCACTGCACACTTCCACAAGTGCTTGCAG +
Preference number: 6 (lower is better)
Translates to: LLLLGVRRRKKA*CSTAHFHKCLQ
Trigger: CTGCAAGCACTTGTGGAAGTGTGCAGTGGAGCACCATGCCTTCTTCCGTCTGCGCACACCCAGCAACAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CAA 72 bp ACGCGCACTGTCCAGCCTGAACACGAAGGTGTGCTCTaGCTCACGCCCCTGGTCATCATCTTCCACTACTAC +
Preference number: 6 (lower is better)
Translates to: TRTVQPEHEGVL*LTPLVIIFHYY
Trigger: GTAGTAGTGGAAGATGATGACCAGGGGCGTGAGCAAGAGCACACCTTCGTGTTCAGGCTGGACAGTGCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CAA 72 bp AAGGCATGGTGCTCCACTGCACACTTCCACAAGTGCTaGCAGGTACGCGCACTGTCCAGCCTGAACACGAAG +
Preference number: 6 (lower is better)
Translates to: KAWCSTAHFHKC*QVRALSSLNTK
Trigger: CTTCGTGTTCAGGCTGGACAGTGCGCGTACCTGCAAGCACTTGTGGAAGTGTGCAGTGGAGCACCATGCCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CAA 72 bp GGTGCTGGTTCTTCGCAATCTGGAGCCGTGTGTAGCTaGATATTCCGTCCGTCCACTGAACCGGAAGCGGGA +
Preference number: 6 (lower is better)
Translates to: GAGSSQSGAVCS*IFRPSTEPEAG
Trigger: TCCCGCTTCCGGTTCAGTGGACGGACGGAATATCAAGCTACACACGGCTCCAGATTGCGAAGAACCAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CAA 90 bp TCATCTTCTCTCTTTCCAGTTCCTGCCGGAGCGTCTCTGCACTGGTaGCCAGAGAGACGGGCTTCCGGGAGGTATAGATGGTCTGTACTG +
Preference number: 6 (lower is better)
Translates to: SSSLFPVPAGASLHW*PERRASGRYRWSVL
Trigger: CAGTACAGACCATCTATACCTCCCGGAAGCCCGTCTCTCTGGCAACCAGTGCAGAGACGCTCCGGCAGGAACTGGAAAGAGAGAAGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS TCA 72 bp GGTCCCACTTTCATCTGTTTCTTTATGGGTTTCGCGTaGTCCAGCCAGTGCGTGACCTGGGCAGAGTCGAGG +
Preference number: 6 (lower is better)
Translates to: GPTFICFFMGFA*SSQCVTWAESR
Trigger: CCTCGACTCTGCCCAGGTCACGCACTGGCTGGATCACGCGAAACCCATAAAGAAACAGATGAAAGTGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS TCA 72 bp GTGCTGGTTCTTCGCAATCTGGAGCCGTGTGTAGCTTaGTATTCCGTCCGTCCACTGAACCGGAAGCGGGAA +
Preference number: 6 (lower is better)
Translates to: VLVLRNLEPCVA*YSVRPLNRKRE
Trigger: TTCCCGCTTCCGGTTCAGTGGACGGACGGAATATCAAGCTACACACGGCTCCAGATTGCGAAGAACCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS TCA 72 bp AGCAGAGCTGAGCAGCAATTACTGGGTTGCTCGCTTTaGATGTGGAATGTCGCCGGGACGGGTAACGTTTGC +
Preference number: 6 (lower is better)
Translates to: SRAEQQLLGCSL*MWNVAGTGNVC
Trigger: GCAAACGTTACCCGTCCCGGCGACATTCCACATTCAAAGCGAGCAACCCAGTAATTGCTGCTCAGCTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CCA 72 bp GGTCCTGGACATAGTCAAAGTGGCTGCCATCTCCACTaGCTGAGGTTTTCCAGTGTGGCCTGTCATCCTGAA +
Preference number: 6 (lower is better)
Translates to: GPGHSQSGCHLH*LRFSSVACHPE
Trigger: TTCAGGATGACAGGCCACACTGGAAAACCTCAGCCAGTGGAGATGGCAGCCACTTTGACTATGTCCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS CCA 72 bp ATAGATGGTCTGTACTGTGGCCACAGTCTCTGTCAGTaGCCGCAGGGTCACTGTTGGAATCAACGGGGAAGA +
Preference number: 6 (lower is better)
Translates to: IDGLYCGHSLCQ*PQGHCWNQRGR
Trigger: TCTTCCCCGTTGATTCCAACAGTGACCCTGCGGCCACTGACAGAGACTGTGGCCACAGTACAGACCATCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS CAA 90 bp TCTGTACTGTGGCCACAGTCTCTGTCAGTGGCCGCAGGGTCACTGTaGGAATCAACGGGGAAGACTGGCCAGGACAACACTGTAATTTGT +
Preference number: 6 (lower is better)
Translates to: SVLWPQSLSVAAGSL*ESTGKTGQDNTVIC
Trigger: ACAAATTACAGTGTTGTCCTGGCCAGTCTTCCCCGTTGATTCCAACAGTGACCCTGCGGCCACTGACAGAGACTGTGGCCACAGTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS CCA 72 bp AGTGGTACACAATCTGGTCGAACAAATCCTGGCCTTTaGCATGTTTCGGCAGGTCCACGCTCACTTCGGTTC +
Preference number: 6 (lower is better)
Translates to: SGTQSGRTNPGL*HVSAGPRSLRF
Trigger: GAACCGAAGTGAGCGTGGACCTGCCGAAACATGCCAAAGGCCAGGATTTGTTCGACCAGATTGTGTACCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CCA 72 bp AGGTCCAAGTGGTACACAATCTGGTCGAACAAATCCTaGCCTTTGGCATGTTTCGGCAGGTCCACGCTCACT +
Preference number: 6 (lower is better)
Translates to: RSKWYTIWSNKS*PLACFGRSTLT
Trigger: AGTGAGCGTGGACCTGCCGAAACATGCCAAAGGCCAGGATTTGTTCGACCAGATTGTGTACCACTTGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CCA 72 bp GGCCGCAGGGTCACTGTTGGAATCAACGGGGAAGACTaGCCAGGACAACACTGTAATTTGTTCTCTCTAAAG +
Preference number: 6 (lower is better)
Translates to: GRRVTVGINGED*PGQHCNLFSLK
Trigger: CTTTAGAGAGAACAAATTACAGTGTTGTCCTGGCCAGTCTTCCCCGTTGATTCCAACAGTGACCCTGCGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS CAA 72 bp AAGTGGTACACAATCTGGTCGAACAAATCCTGGCCTTaGGCATGTTTCGGCAGGTCCACGCTCACTTCGGTT +
Preference number: 6 (lower is better)
Translates to: KWYTIWSNKSWP*ACFGRSTLTSV
Trigger: AACCGAAGTGAGCGTGGACCTGCCGAAACATGCCAAAGGCCAGGATTTGTTCGACCAGATTGTGTACCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CCA 72 bp CTGGAAGATATCGAACTCCATGGCTTCTGTCTGATTTaGGATGAACCGAAACTCAGACACAAGCTCGGGCGT +
Preference number: 6 (lower is better)
Translates to: LEDIELHGFCLI*DEPKLRHKLGR
Trigger: ACGCCCGAGCTTGTGTCTGAGTTTCGGTTCATCCCAAATCAGACAGAAGCCATGGAGTTCGATATCTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CCA 72 bp AGGATTTGCTTTAGAGCAGAGCTGAGCAGCAATTACTaGGTTGCTCGCTTTGAATGTGGAATGTCGCCGGGA +
Preference number: 6 (lower is better)
Translates to: RICFRAELSSNY*VARFECGMSPG
Trigger: TCCCGGCGACATTCCACATTCAAAGCGAGCAACCCAGTAATTGCTGCTCAGCTCTGCTCTAAAGCAAATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS GCA 72 bp GGTAAAGGGATCAGGAAACGGGTTCATCACTGGCTCTaGTGGGAACGTTTTTATCAGCCTCGTTTTGATTGG +
Preference number: 6 (lower is better)
Translates to: GKGIRKRVHHWL*WERFYQPRFDW
Trigger: CCAATCAAAACGAGGCTGATAAAAACGTTCCCAGCAGAGCCAGTGATGAACCCGTTTCCTGATCCCTTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS CCA 72 bp AAAGGGATCAGGAAACGGGTTCATCACTGGCTCTGCTaGGAACGTTTTTATCAGCCTCGTTTTGATTGGACG +
Preference number: 6 (lower is better)
Translates to: KGIRKRVHHWLC*ERFYQPRFDWT
Trigger: CGTCCAATCAAAACGAGGCTGATAAAAACGTTCCCAGCAGAGCCAGTGATGAACCCGTTTCCTGATCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS CCA 72 bp TCCTGTGGTAAAGGGATCAGGAAACGGGTTCATCACTaGCTCTGCTGGGAACGTTTTTATCAGCCTCGTTTT +
Preference number: 6 (lower is better)
Translates to: SCGKGIRKRVHH*LCWERFYQPRF
Trigger: AAAACGAGGCTGATAAAAACGTTCCCAGCAGAGCCAGTGATGAACCCGTTTCCTGATCCCTTTACCACAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS CAA 72 bp ATCAACGGGGAAGACTGGCCAGGACAACACTGTAATTaGTTCTCTCTAAAGTCTGCCAGAGGGGTAGCTTCT +
Preference number: 6 (lower is better)
Translates to: INGEDWPGQHCN*FSLKSARGVAS
Trigger: AGAAGCTACCCCTCTGGCAGACTTTAGAGAGAACAAATTACAGTGTTGTCCTGGCCAGTCTTCCCCGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044022.5
CDS CAA 72 bp ATCAACGGGGAAGACTGGCCAGGACAACACTGTAATTaGTTCTCTCTAAAGTCTGCAGGGAACTGTGGTCCT +
Preference number: 6 (lower is better)
Translates to: INGEDWPGQHCN*FSLKSAGNCGP
Trigger: AGGACCACAGTTCCCTGCAGACTTTAGAGAGAACAAATTACAGTGTTGTCCTGGCCAGTCTTCCCCGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS CAA 90 bp GGGTTCATCACTGGCTCTGCTGGGAACGTTTTTATCAGCCTCGTTTaGATTGGACGGTACATGCAAACTCCAGTAGTCTCTTCCTTCATG +
Preference number: 6 (lower is better)
Translates to: GFITGSAGNVFISLV*IGRYMQTPVVSSFM
Trigger: CATGAAGGAAGAGACTACTGGAGTTTGCATGTACCGTCCAATCAAAACGAGGCTGATAAAAACGTTCCCAGCAGAGCCAGTGATGAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS GCA 72 bp ATGGTACTGAGGCTGGTAATTGTGGACTTCAGGATTTaGTTTAGAGCAGAGCTGAGCAGCAATTACTGGGTT +
Preference number: 6 (lower is better)
Translates to: MVLRLVIVDFRI*FRAELSSNYWV
Trigger: AACCCAGTAATTGCTGCTCAGCTCTGCTCTAAAGCAAATCCTGAAGTCCACAATTACCAGCCTCAGTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS GCA 72 bp AATCTGGGCATTCACACGAGAGGCATTCTCCAGCTGTaGTTTCAAAATGTTGCACTTCACATGATCTGCTAC +
Preference number: 6 (lower is better)
Translates to: NLGIHTRGILQL*FQNVALHMICY
Trigger: GTAGCAGATCATGTGAAGTGCAACATTTTGAAAGCACAGCTGGAGAATGCCTCTCGTGTGAATGCCCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS CCA 72 bp CTCTGCTGGGAACGTTTTTATCAGCCTCGTTTTGATTaGACGGTACATGCAAACTCCAGTAGTCTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: LCWERFYQPRFD*TVHANSSSLFL
Trigger: AAGGAAGAGACTACTGGAGTTTGCATGTACCGTCCAATCAAAACGAGGCTGATAAAAACGTTCCCAGCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000095076.10
CDS CAA 72 bp GCGGCTTCCACGCGGATAGGAATGGGGCTTCTGACATaGGTATCCTGGAGATTCGATTTCTTATTGATATTT +
Preference number: 6 (lower is better)
Translates to: AASTRIGMGLLT*VSWRFDFLLIF
Trigger: AAATATCAATAAGAAATCGAATCTCCAGGATACCAATGTCAGAAGCCCCATTCCTATCCGCGTGGAAGCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044022.5
ENSMUST00000095076.10
CDS CAA 72 bp CCAGTGTGGCCTGTCATCCTGAAAACATGGCTTGTTTaGTTTGCAGATGGAATGGTTACTGACATTTGGAGA +
Preference number: 6 (lower is better)
Translates to: PVWPVILKTWLV*FADGMVTDIWR
Trigger: TCTCCAAATGTCAGTAACCATTCCATCTGCAAACAAAACAAGCCATGTTTTCAGGATGACAGGCCACACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030142.4
CDS TCA 72 bp GTACCTTGTAAATTCCTCTCGAAGGTTGTTTGGTTCTaGAGAATAGTATTTGACTCGAAAGTGCAAGGCATA +
Preference number: 6 (lower is better)
Translates to: VPCKFLSKVVWF*RIVFDSKVQGI
Trigger: TATGCCTTGCACTTTCGAGTCAAATACTATTCTTCAGAACCAAACAACCTTCGAGAGGAATTTACAAGGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10
CDS CAA 72 bp ATTTTGGTGATCTTAGGCCAAAAGAATAAGCCTATTTaGTTAGCTCCTTCAAAGATTAATATGCCTGTCGGG +
Preference number: 6 (lower is better)
Translates to: ILVILGQKNKPI*LAPSKINMPVG
Trigger: CCCGACAGGCATATTAATCTTTGAAGGAGCTAACAAAATAGGCTTATTCTTTTGGCCTAAGATCACCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030142.4
ENSMUST00000095076.10