Pregenerated sensors for EPB41L4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024376Ensembl transcript IDs: ENSMUST00000025234.7
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCAGGGGCTCATCGGAAGTTGCTGGTCTTGACTGGGTGGAGAGTTaGATGGTCAGAATTTCAGGAAATAGATGGTGGTATCCAGTGAGT | + |
|
Preference number: 1 (lower is better) Translates to: SRGSSEVAGLDWVES*MVRISGNRWWYPVS Trigger: ACTCACTGGATACCACCATCTATTTCCTGAAATTCTGACCATCCAACTCTCCACCCAGTCAAGACCAGCAACTTCCGATGAGCCCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR TCA 90 bp | AGAGTTGGATGGTCAGAATTTCAGGAAATAGATGGTGGTATCCAGTaGGTTTATAAGGTTGTCCTCCCAAAGGCCCAGAGCACAAGAATG | + |
|
Preference number: 1 (lower is better) Translates to: RVGWSEFQEIDGGIQ*VYKVVLPKAQSTRM Trigger: CATTCTTGTGCTCTGGGCCTTTGGGAGGACAACCTTATAAACTCACTGGATACCACCATCTATTTCCTGAAATTCTGACCATCCAACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR GCA 90 bp | GCTGTACATAAATCCTTAGACGATGCTAAAGACACATGTCCAGGGTaGATGGATAATGACCTAATTCACAGTTTCAGAAGTACCAGTGGC | + |
|
Preference number: 1 (lower is better) Translates to: AVHKSLDDAKDTCPG*MDNDLIHSFRSTSG Trigger: GCCACTGGTACTTCTGAAACTGTGAATTAGGTCATTATCCATGCACCCTGGACATGTGTCTTTAGCATCGTCTAAGGATTTATGTACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR-3UTR CCA 90 bp | TTAGGTTTTATTAAAGCAAGATGGGGAGATGGAGCAGGGCAGTTCCACGCAGGTGTTGCTGGTCTTGACTaGGTGGAGAGTTGGATGGTC | + |
|
Preference number: 2 (lower is better) Translates to: LGFIKARWGDGAGQFHAGVAGLD*VESWMV Trigger: GACCATCCAACTCTCCACCCAGTCAAGACCAGCAAC...ACCTGCGTGGAACTGCCCTGCTCCATCTCCCCATCTTGCTTTAATAAAACCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR-3UTR TCA 90 bp | TGTAGAGGCAGCCTAGAATTACAGCAGAAGAATGAAGACATTGAGGACAGGACAGGAAGTTGCTGGTCTTaGCTGGGTGGAGAGTTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: CRGSLELQQKNEDIEDRTGSCWS*LGGELD Trigger: ATCCAACTCTCCACCCAGTCAAGACCAGCAACTTCC...TGTCCTGTCCTCAATGTCTTCATTCTTCTGCTGTAATTCTAGGCTGCCTCTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR-3UTR TCA 90 bp | CTGAACCCTCAAATAGCTGGAGGCATTTGTGGGATAAAGTTTGATTACGGGGCAAGTGCTGTTCCTGTCTaGAAAGCCATCATGCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: LNPQIAGGICGIKFDYGASAVPV*KAIMHR Trigger: CCTGTGCATGATGGCTTTTCAGACAGGAACAGCACT...TGCCCCGTAATCAAACTTTATCCCACAAATGCCTCCAGCTATTTGAGGGTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR-3UTR CCA 90 bp | GAATTACAGCAGAAGAATGAAGACATTGAGGACAGGACACTGCGTGGGAAGGAAGACTGGGTGGAGAGTTaGATGGTCAGAATTTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: ELQQKNEDIEDRTLRGKEDWVES*MVRISG Trigger: TCCTGAAATTCTGACCATCCAACTCTCCACCCAGTC...TTCCTTCCCACGCAGTGTCCTGTCCTCAATGTCTTCATTCTTCTGCTGTAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR-3UTR CCA 90 bp | GAATTACAGCAGAAGAATGAAGACATTGAGGACAGGACACTGCGTGGGAAGGAAGTTAAGGGTAGAGCTTaGCAAGCACTATCACTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: ELQQKNEDIEDRTLRGKEVKGRA*QALSLS Trigger: GCTCAGTGATAGTGCTTGCCAAGCTCTACCCTTAAC...TTCCTTCCCACGCAGTGTCCTGTCCTCAATGTCTTCATTCTTCTGCTGTAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR-3UTR TCA 90 bp | TCTGAGTGCTGTTCCTGTCTGAAAAGCCATCATGCACAGGTAAAGGTCCAAAACGATGGTGGTATCCAGTaGGTTTATAAGGTTGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: SECCSCLKSHHAQVKVQNDGGIQ*VYKVVL Trigger: GAGGACAACCTTATAAACTCACTGGATACCACCATC...GTTTTGGACCTTTACCTGTGCATGATGGCTTTTCAGACAGGAACAGCACTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAAAAGCCATCATGCACAGGTAAAGGTCCAAAACTTGGGAACATGGGTGGGGGGTGGAGAGTTGGATaGTCAGAATTTCAGGAAATA | + |
|
Preference number: 2 (lower is better) Translates to: SEKPSCTGKGPKLGNMGGGWRVG*SEFQEI Trigger: TATTTCCTGAAATTCTGACCATCCAACTCTCCACCC...CCCACCCATGTTCCCAAGTTTTGGACCTTTACCTGTGCATGATGGCTTTTCAGA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR-3UTR CCA 90 bp | TTAGGTTTTATTAAAGCAAGATGGGGAGATGGAGCAGGGCAGTTCCACGCAGGTGAACCCTCAAATAGCTaGAGGCATTTGTGGGATAAA | + |
|
Preference number: 2 (lower is better) Translates to: LGFIKARWGDGAGQFHAGEPSNS*RHLWDK Trigger: TTTATCCCACAAATGCCTCCAGCTATTTGAGGGTTC...ACCTGCGTGGAACTGCCCTGCTCCATCTCCCCATCTTGCTTTAATAAAACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGAATGCTGTACATAAATCCTTAGACGATGCTAAAGACACATGTCCAGGGTGCTTTCAGAAGTACCAGTaGCACGGCACGAATTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: KNAVHKSLDDAKDTCPGCFQKYQ*HGTNFP Trigger: AGGGAAATTCGTGCCGTGCCACTGGTACTTCTGAAA...GCACCCTGGACATGTGTCTTTAGCATCGTCTAAGGATTTATGTACAGCATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR TCA 72 bp | GGGGAGATGGAGCAGGGCAGTTCCACGCAGGTGGACTaGGATGTTACCACAGTGAGGTGGGATGTAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GEMEQGSSTQVD*DVTTVRWDVEA Trigger: TGCCTCTACATCCCACCTCACTGTGGTAACATCTCAGTCCACCTGCGTGGAACTGCCCTGCTCCATCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR TCA 72 bp | CCCAGAGTCCAGGGGCTCATCGGAAGTTGCTGGTCTTaGCTGGGTGGAGAGTTGGATGGTCAGAATTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PRVQGLIGSCWS*LGGELDGQNFR Trigger: CCTGAAATTCTGACCATCCAACTCTCCACCCAGTCAAGACCAGCAACTTCCGATGAGCCCCTGGACTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR CCA 72 bp | CATCATGCACAGGTAAAGGTCCAAAACTTGGGAACATaGGTGGGCAGGTGTGTAGGGTCTGGGACAGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: HHAQVKVQNLGT*VGRCVGSGTAH Trigger: GTGGGCTGTCCCAGACCCTACACACCTGCCCACCCATGTTCCCAAGTTTTGGACCTTTACCTGTGCATGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR CCA 72 bp | CTGCGTGGGAAGGAATCCTTGGATTTGGTTTTAGTTTaGGGTGAGGGAGATTGTGGGAAAGGCCACAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LRGKESLDLVLV*GEGDCGKGHSS Trigger: TGAACTGTGGCCTTTCCCACAATCTCCCTCACCCCAAACTAAAACCAAATCCAAGGATTCCTTCCCACGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR CCA 72 bp | CGGAAGTTGCTGGTCTTGACTGGGTGGAGAGTTGGATaGTCAGAATTTCAGGAAATAGATGGTGGTATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RKLLVLTGWRVG*SEFQEIDGGIQ Trigger: CTGGATACCACCATCTATTTCCTGAAATTCTGACCATCCAACTCTCCACCCAGTCAAGACCAGCAACTTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR CCA 72 bp | AGTTTAAAGGAAGCCAGAGACTGCTACAGAAAAGGATaGGTCACAGCTGATGGCACAATGCTGAGGGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLKEARDCYRKG*VTADGTMLRVL Trigger: AAGAACCCTCAGCATTGTGCCATCAGCTGTGACCCATCCTTTTCTGTAGCAGTCTCTGGCTTCCTTTAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR TCA 72 bp | TGGTCAGAATTTCAGGAAATAGATGGTGGTATCCAGTaGGTTTATAAGGTTGTCCTCCCAAAGGCCCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: WSEFQEIDGGIQ*VYKVVLPKAQS Trigger: GCTCTGGGCCTTTGGGAGGACAACCTTATAAACTCACTGGATACCACCATCTATTTCCTGAAATTCTGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR CCA 72 bp | TCATCGGAAGTTGCTGGTCTTGACTGGGTGGAGAGTTaGATGGTCAGAATTTCAGGAAATAGATGGTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SSEVAGLDWVES*MVRISGNRWWY Trigger: ATACCACCATCTATTTCCTGAAATTCTGACCATCCAACTCTCCACCCAGTCAAGACCAGCAACTTCCGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR GCA 72 bp | AAATCCTTAGACGATGCTAAAGACACATGTCCAGGGTaGATGGATAATGACCTAATTCACAGTTTCAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KSLDDAKDTCPG*MDNDLIHSFRS Trigger: ACTTCTGAAACTGTGAATTAGGTCATTATCCATGCACCCTGGACATGTGTCTTTAGCATCGTCTAAGGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | GGAGATGGAGCAGGGCAGTTCCACGCAGGTGGACTGAGATGTTACCACAGTGAGGAGCCTCCAGACCCCTaGGCATCTGAGGAACGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GDGAGQFHAGGLRCYHSEEPPDP*ASEERV Trigger: CACCCGTTCCTCAGATGCTCAGGGGTCTGGAGGCTC...CTCACTGTGGTAACATCTCAGTCCACCTGCGTGGAACTGCCCTGCTCCATCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | AAAGGTCCAAAACTTGGGAACATGGGTGGGCAGGTGTGTAGGGTCTGGGACAGCTGCCGCAGGAGAGGTTaGGCTGCCGGGCACAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGPKLGNMGGQVCRVWDSCRRRG*AAGHRE Trigger: TTCCCTGTGCCCGGCAGCGCAACCTCTCCTGCGGCA...GCTGTCCCAGACCCTACACACCTGCCCACCCATGTTCCCAAGTTTTGGACCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR CAA 72 bp | CTGATGCAGGCCCAGAGTCCAGGGGCTCATCGGAAGTaGCTGGTCTTGACTGGGTGGAGAGTTGGATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LMQAQSPGAHRK*LVLTGWRVGWS Trigger: TGACCATCCAACTCTCCACCCAGTCAAGACCAGCAACTTCCGATGAGCCCCTGGACTCTGGGCCTGCATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | AGTCCAGGGGCTCATCGGAAGTTGCTGGTCTTGACTGGGTGGAGAGTTGGATGGCTTTTGTTGACTTCTTaGTGCCCTGCTGCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPGAHRKLLVLTGWRVGWLLLTS*CPAAGW Trigger: CCACCCAGCAGCAGGGCATCAAGAAGTCAACAAAAG...CCATCCAACTCTCCACCCAGTCAAGACCAGCAACTTCCGATGAGCCCCTGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | AGTCCAGGGGCTCATCGGAAGTTGCTGGTCTTGACTGGGTGGAGAGTTGGATGGTCTTCCCAAGGTGCATaGGATTTGCTTCTTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPGAHRKLLVLTGWRVGWSSQGA*DLLLWG Trigger: CCCCCAAAGAAGCAAATCTCATGCACCTTGGGAAGA...CCATCCAACTCTCCACCCAGTCAAGACCAGCAACTTCCGATGAGCCCCTGGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | AGTCCAGGGGCTCATCGGAAGTTGCTGGTCTTGACTGGGTGGAGAGTTGGATGGGGGATCTCCTTCAGCTaGTCTTCTGACAGTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPGAHRKLLVLTGWRVGWGISFS*SSDSPD Trigger: ATCTGGACTGTCAGAAGAGCAGCTGAAGGAGATCCC...CCATCCAACTCTCCACCCAGTCAAGACCAGCAACTTCCGATGAGCCCCTGGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | CTGAACCCTCAAATAGCTGGAGGCATTTGTGGGATAAAGTTTGATTACGGGGCACAAGGCAGCCGGCCCTaGAGGGCATCTTGCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LNPQIAGGICGIKFDYGAQGSRP*RASCFT Trigger: GGTGAAGCAAGATGCCCTTCAGGGCCGGCTGCCTTG...TGCCCCGTAATCAAACTTTATCCCACAAATGCCTCCAGCTATTTGAGGGTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| 3UTR CAA 72 bp | CTGAAAAGCCATCATGCACAGGTAAAGGTCCAAAACTaGGGAACATGGGTGGGCAGGTGTGTAGGGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKSHHAQVKVQN*GTWVGRCVGSG Trigger: CCCAGACCCTACACACCTGCCCACCCATGTTCCCAAGTTTTGGACCTTTACCTGTGCATGATGGCTTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | ATGCTGAGGGTTCTTTCTGAGTGCTGTTCCTGTCTGAAAAGCCATCATGCACAGTCTGAGCAGCAATATTaGCAGGGCAAGGCAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: MLRVLSECCSCLKSHHAQSEQQY*QGKAAG Trigger: GCCGGCTGCCTTGCCCTGTCAATATTGCTGCTCAGA...CTGTGCATGATGGCTTTTCAGACAGGAACAGCACTCAGAAAGAACCCTCAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CCA 90 bp | TTAGGTTTTATTAAAGCAAGATGGGGAGATGGAGCAGGGCAGTTCCACGCAGGTTGCTTGTATGGGTCGTaGTCTCCCAGTTCGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGFIKARWGDGAGQFHAGCLYGS*SPSSAW Trigger: CCAGGCCGAACTGGGAGACCACGACCCATACAAGCA...ACCTGCGTGGAACTGCCCTGCTCCATCTCCCCATCTTGCTTTAATAAAACCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CCA 90 bp | AAAGGTCCAAAACTTGGGAACATGGGTGGGCAGGTGTGTAGGGTCTGGGACAGCGGCGAGCAGCCTGGATaGTTTTTATGGTTTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGPKLGNMGGQVCRVWDSGEQPG*FLWFLL Trigger: CAGCAAAAACCATAAAAACCATCCAGGCTGCTCGCC...GCTGTCCCAGACCCTACACACCTGCCCACCCATGTTCCCAAGTTTTGGACCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | GGAGATGGAGCAGGGCAGTTCCACGCAGGTGGACTGAGATGTTACCACAGTGAGTACAAGATCTGTCTTTaGGTTCACTTCCGAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GDGAGQFHAGGLRCYHSEYKICL*VHFREN Trigger: GTTCTCTCGGAAGTGAACTCAAAGACAGATCTTGTA...CTCACTGTGGTAACATCTCAGTCCACCTGCGTGGAACTGCCCTGCTCCATCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | TGTAGAGGCAGCCTAGAATTACAGCAGAAGAATGAAGACATTGAGGACAGGACAAGACCCCTGAGCATCTaGGGAACGGGTGACCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CRGSLELQQKNEDIEDRTRPLSI*GTGDRK Trigger: CTTCCGGTCACCCGTTCCTCAGATGCTCAGGGGTCT...TGTCCTGTCCTCAATGTCTTCATTCTTCTGCTGTAATTCTAGGCTGCCTCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | AAAGGTCCAAAACTTGGGAACATGGGTGGGCAGGTGTGTAGGGTCTGGGACAGCCTGCATTTCCAGAGGTaGTTGCAAGCAGTTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGPKLGNMGGQVCRVWDSLHFQR*LQAVLL Trigger: AAGCAAAACTGCTTGCAAGCACCTCTGGAAATGCAG...GCTGTCCCAGACCCTACACACCTGCCCACCCATGTTCCCAAGTTTTGGACCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | CTGAACCCTCAAATAGCTGGAGGCATTTGTGGGATAAAGTTTGATTACGGGGCAAATGAGAATGCCGGATaGGGACCGGGTCACCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNPQIAGGICGIKFDYGANENAG*GPGHPE Trigger: CTCAGGGTGACCCGGTCCGCATCCGGCATTCTCATT...TGCCCCGTAATCAAACTTTATCCCACAAATGCCTCCAGCTATTTGAGGGTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CCA 90 bp | ATGCTGAGGGTTCTTTCTGAGTGCTGTTCCTGTCTGAAAAGCCATCATGCACAGTCTCCGTCTGAACACTaGGATCTTCGGTACTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: MLRVLSECCSCLKSHHAQSPSEH*DLRYCR Trigger: CCGGCAGTACCGAAGATCCCAGTGTTCAGACGGAGA...CTGTGCATGATGGCTTTTCAGACAGGAACAGCACTCAGAAAGAACCCTCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | TCGGAAGTTGCTGGTCTTGACTGGGTGGAGAGTTGGATGGTCAGAATTTCAGGACCGATTGATGTTGTTTaGTCCAGTGGGCTGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEVAGLDWVESWMVRISGPIDVV*SSGLSL Trigger: CAGACTCAGCCCACTGGATCAAACAACATCAATCGG...TCCTGAAATTCTGACCATCCAACTCTCCACCCAGTCAAGACCAGCAACTTCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | CTGAACCCTCAAATAGCTGGAGGCATTTGTGGGATAAAGTTTGATTACGGGGCACTTCAGCTGCTCTTCTaGCAGTCCAGATGGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LNPQIAGGICGIKFDYGALQLLF*QSRWVH Trigger: GTGGACCCATCTGGACTGTCAGAAGAGCAGCTGAAG...TGCCCCGTAATCAAACTTTATCCCACAAATGCCTCCAGCTATTTGAGGGTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | CTGAAAAGCCATCATGCACAGGTAAAGGTCCAAAACTTGGGAACATGGGTGGGCCTGACTCACTACCACTaGTTGTGTTACAGCGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKSHHAQVKVQNLGTWVGLTHYH*LCYSVS Trigger: GCTCACGCTGTAACACAAGCAGTGGTAGTGAGTCAG...GCCCACCCATGTTCCCAAGTTTTGGACCTTTACCTGTGCATGATGGCTTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | CTGAAAAGCCATCATGCACAGGTAAAGGTCCAAAACTTGGGAACATGGGTGGGCAACAGAGCCTTTTGTTaGCTTCTTGATGCCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKSHHAQVKVQNLGTWVGNRAFC*LLDALL Trigger: CAGCAGGGCATCAAGAAGTCAACAAAAGGCTCTGTT...GCCCACCCATGTTCCCAAGTTTTGGACCTTTACCTGTGCATGATGGCTTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | TGTAGAGGCAGCCTAGAATTACAGCAGAAGAATGAAGACATTGAGGACAGGACAACCTCCTCCTCTGCTTaGGATCTGAGTCTTCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CRGSLELQQKNEDIEDRTTSSSA*DLSLRH Trigger: GTGGCGAAGACTCAGATCTCAAGCAGAGGAGGAGGT...TGTCCTGTCCTCAATGTCTTCATTCTTCTGCTGTAATTCTAGGCTGCCTCTACA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | TGTAGAGGCAGCCTAGAATTACAGCAGAAGAATGAAGACATTGAGGACAGGACACATCTGAGGAACGGGTaGCCGGAAGTGGTGGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: CRGSLELQQKNEDIEDRTHLRNG*PEVVVQ Trigger: TTGTACCACCACTTCCGGTCACCCGTTCCTCAGATG...TGTCCTGTCCTCAATGTCTTCATTCTTCTGCTGTAATTCTAGGCTGCCTCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | TTAGGTTTTATTAAAGCAAGATGGGGAGATGGAGCAGGGCAGTTCCACGCAGGTCAGCTCCTTGTGTTCTaGAAGGGTTTTTGCGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LGFIKARWGDGAGQFHAGQLLVF*KGFCGI Trigger: GATCCCGCAAAAACCCTTGCAGAACACAAGGAGCTG...ACCTGCGTGGAACTGCCCTGCTCCATCTCCCCATCTTGCTTTAATAAAACCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | TCTGAGTGCTGTTCCTGTCTGAAAAGCCATCATGCACAGGTAAAGGTCCAAAACTCCAGCTCTTCCTTCTaGTCAGGAACAAACCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SECCSCLKSHHAQVKVQNSSSSF*SGTNRY Trigger: GTACCGGTTTGTTCCTGATCAGAAGGAAGAGCTGGA...GTTTTGGACCTTTACCTGTGCATGATGGCTTTTCAGACAGGAACAGCACTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | TCGGAAGTTGCTGGTCTTGACTGGGTGGAGAGTTGGATGGTCAGAATTTCAGGATTCTGCAAGGGTTTTTaGGGGATCCAGCCAATATGT | + |
|
Preference number: 4 (lower is better) Translates to: SEVAGLDWVESWMVRISGFCKGF*GIQPIC Trigger: ACATATTGGCTGGATCCCGCAAAAACCCTTGCAGAA...TCCTGAAATTCTGACCATCCAACTCTCCACCCAGTCAAGACCAGCAACTTCCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | AAGAATGCTGTACATAAATCCTTAGACGATGCTAAAGACACATGTCCAGGGTGCGGCCTGGATGGCATATaGCCCCATCTGAGCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KNAVHKSLDDAKDTCPGCGLDGI*PHLSSN Trigger: ATTGCTGCTCAGATGGGGGCATATGCCATCCAGGCC...GCACCCTGGACATGTGTCTTTAGCATCGTCTAAGGATTTATGTACAGCATTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CCA 90 bp | ATGCTGAGGGTTCTTTCTGAGTGCTGTTCCTGTCTGAAAAGCCATCATGCACAGACTCTGAGCTCAAACTaGGTTTCCTTGAAGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: MLRVLSECCSCLKSHHAQTLSSN*VSLKCT Trigger: GGTGCACTTCAAGGAAACCCAGTTTGAGCTCAGAGT...CTGTGCATGATGGCTTTTCAGACAGGAACAGCACTCAGAAAGAACCCTCAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CCA 90 bp | TGTAGAGGCAGCCTAGAATTACAGCAGAAGAATGAAGACATTGAGGACAGGACATTGGGCCGGGGAAGTTaGATAGAAAGATCTCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CRGSLELQQKNEDIEDRTLGRGS*IERSRL Trigger: GAGCCGAGATCTTTCTATCCAACTTCCCCGGCCCAA...TGTCCTGTCCTCAATGTCTTCATTCTTCTGCTGTAATTCTAGGCTGCCTCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CCA 90 bp | CTGAACCCTCAAATAGCTGGAGGCATTTGTGGGATAAAGTTTGATTACGGGGCAACGGGTGACCGGAAGTaGTGGTACAAGATCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNPQIAGGICGIKFDYGATGDRK*WYKICL Trigger: AAGACAGATCTTGTACCACCACTTCCGGTCACCCGT...TGCCCCGTAATCAAACTTTATCCCACAAATGCCTCCAGCTATTTGAGGGTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | AATGACCTAATTCACAGTTTCAGAAGTACCAGTGGCACGGCACGAATTTCCCTTTCCACGAGGTTTATGTaGCGGAAAACGTGGTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NDLIHSFRSTSGTARISLSTRFM*RKTWSR Trigger: CCTTGACCACGTTTTCCGTCACATAAACCTCGTGGA...AAGGGAAATTCGTGCCGTGCCACTGGTACTTCTGAAACTGTGAATTAGGTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | CTGAACCCTCAAATAGCTGGAGGCATTTGTGGGATAAAGTTTGATTACGGGGCATGGGTTTCCTTGAAGTaGACCTTTGTAATCCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNPQIAGGICGIKFDYGAWVSLK*TFVIRG Trigger: GCCTCGGATTACAAAGGTGCACTTCAAGGAAACCCA...TGCCCCGTAATCAAACTTTATCCCACAAATGCCTCCAGCTATTTGAGGGTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | AATGACCTAATTCACAGTTTCAGAAGTACCAGTGGCACGGCACGAATTTCCCTTCTTCGCCTCATCAGTTaGGAGGAGTCATTGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: NDLIHSFRSTSGTARISLLRLIS*EESLSL Trigger: CAGTGACAATGACTCCTCGCAACTGATGAGGCGAAG...AAGGGAAATTCGTGCCGTGCCACTGGTACTTCTGAAACTGTGAATTAGGTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | AAGAATGCTGTACATAAATCCTTAGACGATGCTAAAGACACATGTCCAGGGTGCATGGAGGTCCAGTGTTaGTCAGCTCCTTGTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNAVHKSLDDAKDTCPGCMEVQC*SAPCVL Trigger: CAGAACACAAGGAGCTGATCAACACTGGACCTCCAT...GCACCCTGGACATGTGTCTTTAGCATCGTCTAAGGATTTATGTACAGCATTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | AATGACCTAATTCACAGTTTCAGAAGTACCAGTGGCACGGCACGAATTTCCCTTCTTTTCCCAAGACTCTaGGCTCAAACTGGGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NDLIHSFRSTSGTARISLLFPRL*AQTGFP Trigger: AGGAAACCCAGTTTGAGCTCAGAGTCTTGGGAAAAG...AAGGGAAATTCGTGCCGTGCCACTGGTACTTCTGAAACTGTGAATTAGGTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | CTGAACCCTCAAATAGCTGGAGGCATTTGTGGGATAAAGTTTGATTACGGGGCAATTTCCAGAGGTGCTTaGAAGCAGTTTTGCTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNPQIAGGICGIKFDYGAISRGA*KQFCFE Trigger: CTCGAAGCAAAACTGCTTGCAAGCACCTCTGGAAAT...TGCCCCGTAATCAAACTTTATCCCACAAATGCCTCCAGCTATTTGAGGGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | AAGAATGCTGTACATAAATCCTTAGACGATGCTAAAGACACATGTCCAGGGTGCAAGGTGCATGAGATTTaGTTCTTTGGGGGTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KNAVHKSLDDAKDTCPGCKVHEI*FFGGQG Trigger: GCCCTGACCCCCAAAGAAGCAAATCTCATGCACCTT...GCACCCTGGACATGTGTCTTTAGCATCGTCTAAGGATTTATGTACAGCATTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | GTACATAAATCCTTAGACGATGCTAAAGACACATGTCCAGGGTGCATGGATAATCGTGACCTCCTCCTCTaGTTGAGATCTGAGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VHKSLDDAKDTCPGCMDNRDLLL*LRSESS Trigger: CGAAGACTCAGATCTCAAGCAGAGGAGGAGGTCACG...ATTATCCATGCACCCTGGACATGTGTCTTTAGCATCGTCTAAGGATTTATGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | TCTGAAAAGCCATCATGCACAGGTAAAGGTCCAAAACTTGGGAACATGGGTGGGAGCTCCTTCTGGATGTaGTTCCACAGTTCTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SEKPSCTGKGPKLGNMGGSSFWM*FHSSSF Trigger: AAAAGAAGAACTGTGGAAGCACATCCAGAAGGAGCT...CCCACCCATGTTCCCAAGTTTTGGACCTTTACCTGTGCATGATGGCTTTTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CCA 90 bp | AAGAATGCTGTACATAAATCCTTAGACGATGCTAAAGACACATGTCCAGGGTGCTCTGTGCTACCCTCTTaGGGTAAGTCTTGCTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KNAVHKSLDDAKDTCPGCSVLPS*GKSCFD Trigger: GTCGAAGCAAGACTTACCCCAAGAGGGTAGCACAGA...GCACCCTGGACATGTGTCTTTAGCATCGTCTAAGGATTTATGTACAGCATTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CCA 90 bp | TGTAGAGGCAGCCTAGAATTACAGCAGAAGAATGAAGACATTGAGGACAGGACATCCACAAGCTCCTTCTaGATGTGCTTCCACAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CRGSLELQQKNEDIEDRTSTSSF*MCFHSS Trigger: AGAACTGTGGAAGCACATCCAGAAGGAGCTTGTGGA...TGTCCTGTCCTCAATGTCTTCATTCTTCTGCTGTAATTCTAGGCTGCCTCTACA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | GTACATAAATCCTTAGACGATGCTAAAGACACATGTCCAGGGTGCATGGATAATAGATCTCGGCTCATTTaGAAAGCTGTCCTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VHKSLDDAKDTCPGCMDNRSRLI*KAVLPL Trigger: CAGTGGCAGGACAGCTTTGCAAATGAGCCGAGATCT...ATTATCCATGCACCCTGGACATGTGTCTTTAGCATCGTCTAAGGATTTATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR GCA 90 bp | AAGAATGCTGTACATAAATCCTTAGACGATGCTAAAGACACATGTCCAGGGTGCTCTTGGGGTAAGTCTTaGTTCGACTTCTCACCACGT | + |
|
Preference number: 4 (lower is better) Translates to: KNAVHKSLDDAKDTCPGCSWGKS*FDFSPR Trigger: ACGTGGTGAGAAGTCGAAGCAAGACTTACCCCAAGA...GCACCCTGGACATGTGTCTTTAGCATCGTCTAAGGATTTATGTACAGCATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CCA 90 bp | ATGCTGAGGGTTCTTTCTGAGTGCTGTTCCTGTCTGAAAAGCCATCATGCACAGCTTAAAACTTTTCACTaGGGAAGGCGCAATGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLRVLSECCSCLKSHHAQLKTFH*GRRNDL Trigger: AAGATCATTGCGCCTTCCCCAGTGAAAAGTTTTAAG...CTGTGCATGATGGCTTTTCAGACAGGAACAGCACTCAGAAAGAACCCTCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CCA 90 bp | ATGCTGAGGGTTCTTTCTGAGTGCTGTTCCTGTCTGAAAAGCCATCATGCACAGAGTTCTTCTTTTGCTTaGATGTCAGGACTTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MLRVLSECCSCLKSHHAQSSSFA*MSGLLE Trigger: CTCAAGAAGTCCTGACATCCAAGCAAAAGAAGAACT...CTGTGCATGATGGCTTTTCAGACAGGAACAGCACTCAGAAAGAACCCTCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | TCTGAAAAGCCATCATGCACAGGTAAAGGTCCAAAACTTGGGAACATGGGTGGGTGGACCCAAACTTGCTaGGTTTTCTTGATAATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SEKPSCTGKGPKLGNMGGWTQTC*VFLIMN Trigger: ATTCATTATCAAGAAAACTCAGCAAGTTTGGGTCCA...CCCACCCATGTTCCCAAGTTTTGGACCTTTACCTGTGCATGATGGCTTTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | CTGAACCCTCAAATAGCTGGAGGCATTTGTGGGATAAAGTTTGATTACGGGGCATCTGTTAGAATTTTCTaGCTCACTACCACTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNPQIAGGICGIKFDYGASVRIF*LTTTAC Trigger: ACAAGCAGTGGTAGTGAGTCAGAAAATTCTAACAGA...TGCCCCGTAATCAAACTTTATCCCACAAATGCCTCCAGCTATTTGAGGGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | AAGAATGCTGTACATAAATCCTTAGACGATGCTAAAGACACATGTCCAGGGTGCTTGCAGTTATCCGATTaGTGTTGTTTGATCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNAVHKSLDDAKDTCPGCLQLSD*CCLIQW Trigger: CCACTGGATCAAACAACATCAATCGGATAACTGCAA...GCACCCTGGACATGTGTCTTTAGCATCGTCTAAGGATTTATGTACAGCATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR TCA 90 bp | TGTAGAGGCAGCCTAGAATTACAGCAGAAGAATGAAGACATTGAGGACAGGACACCCATTAGAGTTTTATaGATCCTTTCTATGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CRGSLELQQKNEDIEDRTPIRVL*ILSMAS Trigger: AGAAGCCATAGAAAGGATTCATAAAACTCTAATGGG...TGTCCTGTCCTCAATGTCTTCATTCTTCTGCTGTAATTCTAGGCTGCCTCTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CCA 90 bp | CTGAACCCTCAAATAGCTGGAGGCATTTGTGGGATAAAGTTTGATTACGGGGCAAAAATACAAAGTATATaGAGGTCCAGTGTTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNPQIAGGICGIKFDYGAKIQSI*RSSVDQ Trigger: CTGATCAACACTGGACCTCCATATACTTTGTATTTT...TGCCCCGTAATCAAACTTTATCCCACAAATGCCTCCAGCTATTTGAGGGTTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS GCA 90 bp | ATCAGTTGCGAGGAGTCATTGTCACTGCCGCAGGAGAGGTTGCGCTaGCGGGCACAGGGAAACTTTGGTGACTTAGTGCGGTCACTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ISCEESLSLPQERLR*RAQGNFGDLVRSLE Trigger: CTCCAGTGACCGCACTAAGTCACCAAAGTTTCCCTGTGCCCGGCAGCGCAACCTCTCCTGCGGCAGTGACAATGACTCCTCGCAACTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | TTAGGTTTTATTAAAGCAAGATGGGGAGATGGAGCAGGGCAGTTCCACGCAGGTCTGCCGCAGGAGAGGTaGCGCTGCCGGGCACAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGFIKARWGDGAGQFHAGLPQER*RCRAQG Trigger: TCCCTGTGCCCGGCAGCGCAACCTCTCCTGCGGCAG...ACCTGCGTGGAACTGCCCTGCTCCATCTCCCCATCTTGCTTTAATAAAACCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | AAAGGTCCAAAACTTGGGAACATGGGTGGGCAGGTGTGTAGGGTCTGGGACAGCGTGGTGAGGGTGAGCTaGGACTCGTCCAGGAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KGPKLGNMGGQVCRVWDSVVRVS*DSSRSK Trigger: TTTGCTCCTGGACGAGTCCAAGCTCACCCTCACCAC...GCTGTCCCAGACCCTACACACCTGCCCACCCATGTTCCCAAGTTTTGGACCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | AGTCCAGGGGCTCATCGGAAGTTGCTGGTCTTGACTGGGTGGAGAGTTGGATGGACTCACTACCACTGCTaGTGTTACAGCGTGAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPGAHRKLLVLTGWRVGWTHYHC*CYSVSV Trigger: CACGCTCACGCTGTAACACAAGCAGTGGTAGTGAGT...CCATCCAACTCTCCACCCAGTCAAGACCAGCAACTTCCGATGAGCCCCTGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS TCA 90 bp | GATGAACTGTCGAGCCTCCAGACCCCTGAGCATCTGAGGAACGGGTaGCCGGAAGTGGTGGTACAAGATCTGTCTTTGAGTTCACTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: DELSSLQTPEHLRNG*PEVVVQDLSLSSLP Trigger: CGGAAGTGAACTCAAAGACAGATCTTGTACCACCACTTCCGGTCACCCGTTCCTCAGATGCTCAGGGGTCTGGAGGCTCGACAGTTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS GCA 90 bp | TTGATCCAGTGGGCTGAGTCTGTGCTACCCTCTTGGGGTAAGTCTTaGTTCGACTTCTCACCACGTTCTGATTGGGCCGGGGAAGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LIQWAESVLPSWGKS*FDFSPRSDWAGEVG Trigger: TCCAACTTCCCCGGCCCAATCAGAACGTGGTGAGAAGTCGAAGCAAGACTTACCCCAAGAGGGTAGCACAGACTCAGCCCACTGGATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | AAAGGTCCAAAACTTGGGAACATGGGTGGGCAGGTGTGTAGGGTCTGGGACAGCCCTTTTGTTGACTTCTaGATGCCCTGCTGCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KGPKLGNMGGQVCRVWDSPFVDF*MPCCWV Trigger: CACCCAGCAGCAGGGCATCAAGAAGTCAACAAAAGG...GCTGTCCCAGACCCTACACACCTGCCCACCCATGTTCCCAAGTTTTGGACCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS TCA 90 bp | TACCACTGCTTGTGTTACAGCGTGAGCGTGACCTCCTCCTCTGCTTaGGATCTGAGTCTTCGCCACTGTTGTGAGCTTTCCTTCGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YHCLCYSVSVTSSSA*DLSLRHCCELSFAS Trigger: TGAGGCGAAGGAAAGCTCACAACAGTGGCGAAGACTCAGATCTCAAGCAGAGGAGGAGGTCACGCTCACGCTGTAACACAAGCAGTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | AAAGGTCCAAAACTTGGGAACATGGGTGGGCAGGTGTGTAGGGTCTGGGACAGCATGAGATTTGCTTCTTaGGGGGTCAGGGCTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KGPKLGNMGGQVCRVWDSMRFAS*GVRAVF Trigger: GAAAACAGCCCTGACCCCCAAAGAAGCAAATCTCAT...GCTGTCCCAGACCCTACACACCTGCCCACCCATGTTCCCAAGTTTTGGACCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CCA 90 bp | CTCCATAGACAGGATGGAGGTCAACACCATACATCTCCAGGGATTTaGCAGTCCTCAAGTAATTCAGCTCAGCTTCGGAAGGAGCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LHRQDGGQHHTSPGI*QSSSNSAQLRKEPD Trigger: GTCAGGCTCCTTCCGAAGCTGAGCTGAATTACTTGAGGACTGCCAAATCCCTGGAGATGTATGGTGTTGACCTCCATCCTGTCTATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CCA 90 bp | TCCACAAGCTCCTTCTGGATGTGCTTCCACAGTTCTTCTTTTGCTTaGATGTCAGGACTTCTTGAGCGAGATCTGTGTCTGGATCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: STSSFWMCFHSSSFA*MSGLLERDLCLDLR Trigger: CCGGAGATCCAGACACAGATCTCGCTCAAGAAGTCCTGACATCCAAGCAAAAGAAGAACTGTGGAAGCACATCCAGAAGGAGCTTGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | TCTGAAAAGCCATCATGCACAGGTAAAGGTCCAAAACTTGGGAACATGGGTGGGATTGGGCCGGGGAAGTaGGATAGAAAGATCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SEKPSCTGKGPKLGNMGGIGPGK*DRKISA Trigger: AGCCGAGATCTTTCTATCCAACTTCCCCGGCCCAAT...CCCACCCATGTTCCCAAGTTTTGGACCTTTACCTGTGCATGATGGCTTTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS TCA 90 bp | TGGTTCCTTCATTCTCCCCGTTTTCCGTGTTTGCAGTTATCCGATTaGTGTTGTTTGATCCAGTGGGCTGAGTCTGTGCTACCCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WFLHSPRFPCLQLSD*CCLIQWAESVLPSW Trigger: CCAAGAGGGTAGCACAGACTCAGCCCACTGGATCAAACAACATCAATCGGATAACTGCAAACACGGAAAACGGGGAGAATGAAGGAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS GCA 90 bp | TGCTCTTCTGACAGTCCAGATGGGTCCACAAGCTCCTTCTGGATGTaGTTCCACAGTTCTTCTTTTGCTTGGATGTCAGGACTTCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSSDSPDGSTSSFWM*FHSSSFAWMSGLLE Trigger: CTCAAGAAGTCCTGACATCCAAGCAAAAGAAGAACTGTGGAAGCACATCCAGAAGGAGCTTGTGGACCCATCTGGACTGTCAGAAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CCA 90 bp | TTCAGCTGCTCTTCTGACAGTCCAGATGGGTCCACAAGCTCCTTCTaGATGTGCTTCCACAGTTCTTCTTTTGCTTGGATGTCAGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: FSCSSDSPDGSTSSF*MCFHSSSFAWMSGL Trigger: AAGTCCTGACATCCAAGCAAAAGAAGAACTGTGGAAGCACATCCAGAAGGAGCTTGTGGACCCATCTGGACTGTCAGAAGAGCAGCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | ATGCTGAGGGTTCTTTCTGAGTGCTGTTCCTGTCTGAAAAGCCATCATGCACAGAAGATCTCGGCTCATTaGCAAAGCTGTCCTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: MLRVLSECCSCLKSHHAQKISAH*QSCPAT Trigger: AGTGGCAGGACAGCTTTGCAAATGAGCCGAGATCTT...CTGTGCATGATGGCTTTTCAGACAGGAACAGCACTCAGAAAGAACCCTCAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | TCTGAGTGCTGTTCCTGTCTGAAAAGCCATCATGCACAGGTAAAGGTCCAAAACGGATGTCAGGACTTCTaGAGCGAGATCTGTGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SECCSCLKSHHAQVKVQNGCQDF*SEICVW Trigger: CCAGACACAGATCTCGCTCAAGAAGTCCTGACATCC...GTTTTGGACCTTTACCTGTGCATGATGGCTTTTCAGACAGGAACAGCACTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | CTGAACCCTCAAATAGCTGGAGGCATTTGTGGGATAAAGTTTGATTACGGGGCAGTTCTGCAAGGGTTTTaGCGGGATCCAGCCAATATG | + |
|
Preference number: 5 (lower is better) Translates to: LNPQIAGGICGIKFDYGAVLQGF*RDPANM Trigger: CATATTGGCTGGATCCCGCAAAAACCCTTGCAGAAC...TGCCCCGTAATCAAACTTTATCCCACAAATGCCTCCAGCTATTTGAGGGTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | TCGGAAGTTGCTGGTCTTGACTGGGTGGAGAGTTGGATGGTCAGAATTTCAGGAGTGTTGATCAGCTCCTaGTGTTCTGCAAGGGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SEVAGLDWVESWMVRISGVLISS*CSARVF Trigger: AAAAACCCTTGCAGAACACAAGGAGCTGATCAACAC...TCCTGAAATTCTGACCATCCAACTCTCCACCCAGTCAAGACCAGCAACTTCCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | TGTAGAGGCAGCCTAGAATTACAGCAGAAGAATGAAGACATTGAGGACAGGACAGAAGGCGCAATGATCTaGGTGGTTCCTTCATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CRGSLELQQKNEDIEDRTEGAMI*VVPSFS Trigger: GGAGAATGAAGGAACCACCAAGATCATTGCGCCTTC...TGTCCTGTCCTCAATGTCTTCATTCTTCTGCTGTAATTCTAGGCTGCCTCTACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS GCA 90 bp | ATACAAAGTATATGGAGGTCCAGTGTTGATCAGCTCCTTGTGTTCTaGAAGGGTTTTTGCGGGATCCAGCCAATATGTCTGATGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IQSIWRSSVDQLLVF*KGFCGIQPICLMAS Trigger: AGAAGCCATCAGACATATTGGCTGGATCCCGCAAAAACCCTTGCAGAACACAAGGAGCTGATCAACACTGGACCTCCATATACTTTGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CCA 90 bp | CTTCGGAAGGAGCCTGACCCATTAGAGTTTTATGAATCCTTTCTATaGCTTCTTCCAGCTCTTCCTTCTGATCAGGAACAAACCGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: LRKEPDPLEFYESFL*LLPALPSDQEQTGT Trigger: AGTACCGGTTTGTTCCTGATCAGAAGGAAGAGCTGGAAGAAGCCATAGAAAGGATTCATAAAACTCTAATGGGTCAGGCTCCTTCCGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | GAATTACAGCAGAAGAATGAAGACATTGAGGACAGGACACTGCGTGGGAAGGAATCAAACTGGGTTTCCTaGAAGTGCACCTTTGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: ELQQKNEDIEDRTLRGKESNWVS*KCTFVI Trigger: GATTACAAAGGTGCACTTCAAGGAAACCCAGTTTGA...TTCCTTCCCACGCAGTGTCCTGTCCTCAATGTCTTCATTCTTCTGCTGTAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | TCGGAAGTTGCTGGTCTTGACTGGGTGGAGAGTTGGATGGTCAGAATTTCAGGATTCTTGATAATGAATTaGATTCTGTGTCCGGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SEVAGLDWVESWMVRISGFLIMN*ILCPAF Trigger: GAATGCCGGACACAGAATCAAATTCATTATCAAGAA...TCCTGAAATTCTGACCATCCAACTCTCCACCCAGTCAAGACCAGCAACTTCCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | ATGCTGAGGGTTCTTTCTGAGTGCTGTTCCTGTCTGAAAAGCCATCATGCACAGTTTGCAGTTATCCGATaGATGTTGTTTGATCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MLRVLSECCSCLKSHHAQFAVIR*MLFDPV Trigger: CACTGGATCAAACAACATCAATCGGATAACTGCAAA...CTGTGCATGATGGCTTTTCAGACAGGAACAGCACTCAGAAAGAACCCTCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | CTGAACCCTCAAATAGCTGGAGGCATTTGTGGGATAAAGTTTGATTACGGGGCAGTACAAGATCTGTCTTaGAGTTCACTTCCGAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LNPQIAGGICGIKFDYGAVQDLS*SSLPRE Trigger: TTCTCTCGGAAGTGAACTCAAAGACAGATCTTGTAC...TGCCCCGTAATCAAACTTTATCCCACAAATGCCTCCAGCTATTTGAGGGTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS TCA 90 bp | ATGGTTTTTGCTGTAGGTTTCCCAGCCGGGTTGATTGTAGATAGCTaGGACTTTTCTTCAATCAAGCTGTCTTTAGACCCATTTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MVFAVGFPAGLIVDS*DFSSIKLSLDPFLL Trigger: GAGGAGAAATGGGTCTAAAGACAGCTTGATTGAAGAAAAGTCTCAGCTATCTACAATCAACCCGGCTGGGAAACCTACAGCAAAAACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CCA 90 bp | AATGAGGTTTCATTACAGTCTTTTCCCAAGACTCTGAGCTCAAACTaGGTTTCCTTGAAGTGCACCTTTGTAATCCGAGGCCAGAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: NEVSLQSFPKTLSSN*VSLKCTFVIRGQKY Trigger: GTATTTCTGGCCTCGGATTACAAAGGTGCACTTCAAGGAAACCCAGTTTGAGCTCAGAGTCTTGGGAAAAGACTGTAATGAAACCTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CCA 90 bp | CTTGATAATGAATTTGATTCTGTGTCCGGCATTCTGAAAAACGTATaGTGCTCTACGCTGCATTTCCAGAGGTGCTTGCAAGCAGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LDNEFDSVSGILKNV*CSTLHFQRCLQAVL Trigger: CAAAACTGCTTGCAAGCACCTCTGGAAATGCAGCGTAGAGCACCATACGTTTTTCAGAATGCCGGACACAGAATCAAATTCATTATCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS-3UTR CAA 90 bp | TTAGGTTTTATTAAAGCAAGATGGGGAGATGGAGCAGGGCAGTTCCACGCAGGTCTTATGGACCCAAACTaGCTGAGTTTTCTTGATAAT | + |
|
Preference number: 5 (lower is better) Translates to: LGFIKARWGDGAGQFHAGLMDPN*LSFLDN Trigger: ATTATCAAGAAAACTCAGCAAGTTTGGGTCCATAAG...ACCTGCGTGGAACTGCCCTGCTCCATCTCCCCATCTTGCTTTAATAAAACCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS TCA 72 bp | TCTCCCAGTTCGGCCTGGATGGCATATGCCCCCATCTaGGCAGCAATATTGACAGGGCAAGGCAGCCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SPSSAWMAYAPI*AAILTGQGSRP Trigger: GGGCCGGCTGCCTTGCCCTGTCAATATTGCTGCTCAGATGGGGGCATATGCCATCCAGGCCGAACTGGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CCA 72 bp | TCCGACACATACCCCGCAGTGTGCTTGTATGGGTCGTaGTCTCCCAGTTCGGCCTGGATGGCATATGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SDTYPAVCLYGS*SPSSAWMAYAP Trigger: GGGGGCATATGCCATCCAGGCCGAACTGGGAGACCACGACCCATACAAGCACACTGCGGGGTATGTGTCGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS GCA 72 bp | GAGGAGTCATTGTCACTGCCGCAGGAGAGGTTGCGCTaGCGGGCACAGGGAAACTTTGGTGACTTAGTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: EESLSLPQERLR*RAQGNFGDLVR Trigger: CCGCACTAAGTCACCAAAGTTTCCCTGTGCCCGGCAGCGCAACCTCTCCTGCGGCAGTGACAATGACTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CCA 72 bp | CCGGTACTCCGACACATACCCCGCAGTGTGCTTGTATaGGTCGTGGTCTCCCAGTTCGGCCTGGATGGCATA | + |
|
Preference number: 6 (lower is better) Translates to: PVLRHIPRSVLV*VVVSQFGLDGI Trigger: TATGCCATCCAGGCCGAACTGGGAGACCACGACCCATACAAGCACACTGCGGGGTATGTGTCGGAGTACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CAA 90 bp | CGCCTCATCAGTTGCGAGGAGTCATTGTCACTGCCGCAGGAGAGGTaGCGCTGCCGGGCACAGGGAAACTTTGGTGACTTAGTGCGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RLISCEESLSLPQER*RCRAQGNFGDLVRS Trigger: TGACCGCACTAAGTCACCAAAGTTTCCCTGTGCCCGGCAGCGCAACCTCTCCTGCGGCAGTGACAATGACTCCTCGCAACTGATGAGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS TCA 72 bp | CTGATGAACTGTCGAGCCTCCAGACCCCTGAGCATCTaGGGAACGGGTGACCGGAAGTGGTGGTACAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: LMNCRASRPLSI*GTGDRKWWYKI Trigger: GATCTTGTACCACCACTTCCGGTCACCCGTTCCTCAGATGCTCAGGGGTCTGGAGGCTCGACAGTTCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS GCA 72 bp | TGGGCTGAGTCTGTGCTACCCTCTTGGGGTAAGTCTTaGTTCGACTTCTCACCACGTTCTGATTGGGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: WAESVLPSWGKS*FDFSPRSDWAG Trigger: CCCGGCCCAATCAGAACGTGGTGAGAAGTCGAAGCAAGACTTACCCCAAGAGGGTAGCACAGACTCAGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CAA 72 bp | AGTTGCGAGGAGTCATTGTCACTGCCGCAGGAGAGGTaGCGCTGCCGGGCACAGGGAAACTTTGGTGACTTA | + |
|
Preference number: 6 (lower is better) Translates to: SCEESLSLPQER*RCRAQGNFGDL Trigger: TAAGTCACCAAAGTTTCCCTGTGCCCGGCAGCGCAACCTCTCCTGCGGCAGTGACAATGACTCCTCGCAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS TCA 72 bp | TCGAGCCTCCAGACCCCTGAGCATCTGAGGAACGGGTaGCCGGAAGTGGTGGTACAAGATCTGTCTTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSLQTPEHLRNG*PEVVVQDLSLS Trigger: ACTCAAAGACAGATCTTGTACCACCACTTCCGGTCACCCGTTCCTCAGATGCTCAGGGGTCTGGAGGCTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CAA 72 bp | TTCGCCACTGTTGTGAGCTTTCCTTCGCCTCATCAGTaGCGAGGAGTCATTGTCACTGCCGCAGGAGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: FATVVSFPSPHQ*RGVIVTAAGEV Trigger: AACCTCTCCTGCGGCAGTGACAATGACTCCTCGCAACTGATGAGGCGAAGGAAAGCTCACAACAGTGGCGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS TCA 72 bp | TTGTGTTACAGCGTGAGCGTGACCTCCTCCTCTGCTTaGGATCTGAGTCTTCGCCACTGTTGTGAGCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LCYSVSVTSSSA*DLSLRHCCELS Trigger: GGAAAGCTCACAACAGTGGCGAAGACTCAGATCTCAAGCAGAGGAGGAGGTCACGCTCACGCTGTAACACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CAA 90 bp | AGTCTTGCTTCGACTTCTCACCACGTTCTGATTGGGCCGGGGAAGTaGGATAGAAAGATCTCGGCTCATTTGCAAAGCTGTCCTGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SLASTSHHVLIGPGK*DRKISAHLQSCPAT Trigger: AGTGGCAGGACAGCTTTGCAAATGAGCCGAGATCTTTCTATCCAACTTCCCCGGCCCAATCAGAACGTGGTGAGAAGTCGAAGCAAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CCA 72 bp | TGTTTGATCCAGTGGGCTGAGTCTGTGCTACCCTCTTaGGGTAAGTCTTGCTTCGACTTCTCACCACGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CLIQWAESVLPS*GKSCFDFSPRS Trigger: AGAACGTGGTGAGAAGTCGAAGCAAGACTTACCCCAAGAGGGTAGCACAGACTCAGCCCACTGGATCAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CAA 72 bp | GGAAACTTTGGTGACTTAGTGCGGTCACTGGAGGAGTaGTATAGTCCGCTCTGCGGTCCGTTTTCTTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GNFGDLVRSLEE*YSPLCGPFSSQ Trigger: TTGGGAAGAAAACGGACCGCAGAGCGGACTATACAACTCCTCCAGTGACCGCACTAAGTCACCAAAGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS TCA 72 bp | TACTTTAGTGTACGGGATCTCCTTCAGCTGCTCTTCTaGCAGTCCAGATGGGTCCACAAGCTCCTTCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: YFSVRDLLQLLF*QSRWVHKLLLD Trigger: ATCCAGAAGGAGCTTGTGGACCCATCTGGACTGTCAGAAGAGCAGCTGAAGGAGATCCCGTACACTAAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS GCA 72 bp | GACAGTCCAGATGGGTCCACAAGCTCCTTCTGGATGTaGTTCCACAGTTCTTCTTTTGCTTGGATGTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: DSPDGSTSSFWM*FHSSSFAWMSG Trigger: TCCTGACATCCAAGCAAAAGAAGAACTGTGGAAGCACATCCAGAAGGAGCTTGTGGACCCATCTGGACTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CAA 72 bp | GGGCCGGGGAAGTTGGATAGAAAGATCTCGGCTCATTaGCAAAGCTGTCCTGCCACTGTACCGATGTTTATA | + |
|
Preference number: 6 (lower is better) Translates to: GPGKLDRKISAH*QSCPATVPMFI Trigger: TATAAACATCGGTACAGTGGCAGGACAGCTTTGCAAATGAGCCGAGATCTTTCTATCCAACTTCCCCGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CAA 72 bp | TCGACTTCTCACCACGTTCTGATTGGGCCGGGGAAGTaGGATAGAAAGATCTCGGCTCATTTGCAAAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: STSHHVLIGPGK*DRKISAHLQSC Trigger: ACAGCTTTGCAAATGAGCCGAGATCTTTCTATCCAACTTCCCCGGCCCAATCAGAACGTGGTGAGAAGTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CAA 90 bp | ATGGGTCCACAAGCTCCTTCTGGATGTGCTTCCACAGTTCTTCTTTaGCTTGGATGTCAGGACTTCTTGAGCGAGATCTGTGTCTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: MGPQAPSGCASTVLL*LGCQDFLSEICVWI Trigger: GATCCAGACACAGATCTCGCTCAAGAAGTCCTGACATCCAAGCAAAAGAAGAACTGTGGAAGCACATCCAGAAGGAGCTTGTGGACCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS TCA 72 bp | GTTTTCCGTGTTTGCAGTTATCCGATTGATGTTGTTTaGTCCAGTGGGCTGAGTCTGTGCTACCCTCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VFRVCSYPIDVV*SSGLSLCYPLG Trigger: CCCAAGAGGGTAGCACAGACTCAGCCCACTGGATCAAACAACATCAATCGGATAACTGCAAACACGGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS GCA 72 bp | AGTGTTGATCAGCTCCTTGTGTTCTGCAAGGGTTTTTaGGGGATCCAGCCAATATGTCTGATGGCTTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SVDQLLVFCKGF*GIQPICLMASV Trigger: GACAGAAGCCATCAGACATATTGGCTGGATCCCGCAAAAACCCTTGCAGAACACAAGGAGCTGATCAACACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS GCA 72 bp | ATATGGAGGTCCAGTGTTGATCAGCTCCTTGTGTTCTaGAAGGGTTTTTGCGGGATCCAGCCAATATGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: IWRSSVDQLLVF*KGFCGIQPICL Trigger: CAGACATATTGGCTGGATCCCGCAAAAACCCTTGCAGAACACAAGGAGCTGATCAACACTGGACCTCCATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CAA 90 bp | GTTCTGATTGGGCCGGGGAAGTTGGATAGAAAGATCTCGGCTCATTaGCAAAGCTGTCCTGCCACTGTACCGATGTTTATAACTTATGGA | + |
|
Preference number: 6 (lower is better) Translates to: VLIGPGKLDRKISAH*QSCPATVPMFITYG Trigger: TCCATAAGTTATAAACATCGGTACAGTGGCAGGACAGCTTTGCAAATGAGCCGAGATCTTTCTATCCAACTTCCCCGGCCCAATCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS GCA 72 bp | TTTGATTCTGTGTCCGGCATTCTGAAAAACGTATGGTaGTCTACGCTGCATTTCCAGAGGTGCTTGCAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FDSVSGILKNVW*STLHFQRCLQA Trigger: TGCTTGCAAGCACCTCTGGAAATGCAGCGTAGAGCACCATACGTTTTTCAGAATGCCGGACACAGAATCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CCA 72 bp | TCCTTCTGGATGTGCTTCCACAGTTCTTCTTTTGCTTaGATGTCAGGACTTCTTGAGCGAGATCTGTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SFWMCFHSSSFA*MSGLLERDLCL Trigger: CAGACACAGATCTCGCTCAAGAAGTCCTGACATCCAAGCAAAAGAAGAACTGTGGAAGCACATCCAGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CAA 72 bp | TACAAAGTATATGGAGGTCCAGTGTTGATCAGCTCCTaGTGTTCTGCAAGGGTTTTTGCGGGATCCAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: YKVYGGPVLISS*CSARVFAGSSQ Trigger: TTGGCTGGATCCCGCAAAAACCCTTGCAGAACACAAGGAGCTGATCAACACTGGACCTCCATATACTTTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CAA 90 bp | TCATTACAGTCTTTTCCCAAGACTCTGAGCTCAAACTGGGTTTCCTaGAAGTGCACCTTTGTAATCCGAGGCCAGAAATACTTCCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SLQSFPKTLSSNWVS*KCTFVIRGQKYFPT Trigger: AGTGGGGAAGTATTTCTGGCCTCGGATTACAAAGGTGCACTTCAAGGAAACCCAGTTTGAGCTCAGAGTCTTGGGAAAAGACTGTAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS TCA 72 bp | GCTGTAGGTTTCCCAGCCGGGTTGATTGTAGATAGCTaGGACTTTTCTTCAATCAAGCTGTCTTTAGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: AVGFPAGLIVDS*DFSSIKLSLDP Trigger: TGGGTCTAAAGACAGCTTGATTGAAGAAAAGTCTCAGCTATCTACAATCAACCCGGCTGGGAAACCTACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CCA 72 bp | TCATTACAGTCTTTTCCCAAGACTCTGAGCTCAAACTaGGTTTCCTTGAAGTGCACCTTTGTAATCCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLQSFPKTLSSN*VSLKCTFVIRG Trigger: GCCTCGGATTACAAAGGTGCACTTCAAGGAAACCCAGTTTGAGCTCAGAGTCTTGGGAAAAGACTGTAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS CCA 72 bp | GAATTTGATTCTGTGTCCGGCATTCTGAAAAACGTATaGTGCTCTACGCTGCATTTCCAGAGGTGCTTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: EFDSVSGILKNV*CSTLHFQRCLQ Trigger: TTGCAAGCACCTCTGGAAATGCAGCGTAGAGCACCATACGTTTTTCAGAATGCCGGACACAGAATCAAATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS TCA 72 bp | TTCTTGATAATGAATTTGATTCTGTGTCCGGCATTCTaGAAAACGTATGGTGCTCTACGCTGCATTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FLIMNLILCPAF*KTYGALRCISR Trigger: TCTGGAAATGCAGCGTAGAGCACCATACGTTTTTCAGAATGCCGGACACAGAATCAAATTCATTATCAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||
| CDS TCA 72 bp | TGTACCGATGTTTATAACTTATGGACCCAAACTTGCTaGGTTTTCTTGATAATGAATTTGATTCTGTGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: CTDVYNLWTQTC*VFLIMNLILCP Trigger: CGGACACAGAATCAAATTCATTATCAAGAAAACTCAGCAAGTTTGGGTCCATAAGTTATAAACATCGGTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025234.7 |
||