RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPB41L2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000019978

Ensembl transcript IDs: ENSMUST00000053748.16, ENSMUST00000092645.7, ENSMUST00000217929.2, ENSMUST00000217943.2, ENSMUST00000218903.2, ENSMUST00000219166.2, ENSMUST00000219224.2, ENSMUST00000219372.2, ENSMUST00000219805.2, ENSMUST00000219900.2, ENSMUST00000219967.2, ENSMUST00000220121.2, ENSMUST00000220290.2

Found 601 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTaGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGT +
Preference number: 1 (lower is better)
Translates to: REGHTVWFSSCSGML*QSACLRSTALWAEG
Trigger: ACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACCGTGTGCCCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR TCA 90 bp TGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTaGGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTACC +
Preference number: 1 (lower is better)
Translates to: CGSPPVLECCGKAHV*EVLHCGPRVSQHST
Trigger: GGTACTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR CCA 90 bp GAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTaGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTG +
Preference number: 1 (lower is better)
Translates to: EAAWFSLSKREGHTV*FSSCSGMLWQSACL
Trigger: CAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR GCA 90 bp CCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAAAGCTaGAAGTCATCAAACTATGTCAGAGATTACCTGCTCAGTAGCAAA +
Preference number: 1 (lower is better)
Translates to: PDRLSPTSSSQCLQS*KSSNYVRDYLLSSK
Trigger: TTTGCTACTGAGCAGGTAATCTCTGACATAGTTTGATGACTTGCAGCTTTGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR CCA 90 bp TCTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTaGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTT +
Preference number: 1 (lower is better)
Translates to: SSGFWSLLPVGAQFC*SSGTALRLGMVKVL
Trigger: AAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR GCA 90 bp AATTCTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTaGTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTT +
Preference number: 1 (lower is better)
Translates to: NSSGFWSLLPVGAQF*WSSGTALRLGMVKV
Trigger: AACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR TCA 90 bp TACATACAGACTTGGGCTCATAAGTGCAAGTGCAATATTGAGTTTTaGTCAAGATTAAAATACTATGTTCTCCTGACACGTGTCAATTAC +
Preference number: 1 (lower is better)
Translates to: YIQTWAHKCKCNIEF*SRLKYYVLLTRVNY
Trigger: GTAATTGACACGTGTCAGGAGAACATAGTATTTTAATCTTGATCAAAACTCAATATTGCACTTGCACTTATGAGCCCAAGTCTGTATGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
3UTR-3UTR TCA 90 bp GTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACCAGCACCTGTTCAGGTaGACAGCGCCTTACCAGCCC +
Preference number: 2 (lower is better)
Translates to: VAKRMSEKYCTVGRGSLNQHLFR*TAPYQP
Trigger: GGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGCTG...GTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR TCA 90 bp AGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCCAGCACCTGTTCAGGTaGACAGCGCCTTACCAGCCC +
Preference number: 2 (lower is better)
Translates to: REGHTVWFSSCSGMLWQSQHLFR*TAPYQP
Trigger: GGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGCTG...GCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACCGTGTGCCCTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR TCA 90 bp TGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGCACCTGTTCAGGTaGACAGCGCCTTACCAGCCC +
Preference number: 2 (lower is better)
Translates to: WQSACLRSTALWAEGLSTQHLFR*TAPYQP
Trigger: GGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGCTG...TGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR GCA 90 bp TGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTACCTGGTCGTCGGAGCACAGTTTTaGTGGAGTAGTGGTACGGCG +
Preference number: 2 (lower is better)
Translates to: CLRSTALWAEGLSTQYLVVGAQF*WSSGTA
Trigger: CGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC...GACCAGGTACTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp GCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCACTGTCGGAGCACAGTTTTGCTaGAGTAGTGGTACGGCGTTA +
Preference number: 2 (lower is better)
Translates to: APVQVNSALPARLALFTVGAQFC*SSGTAL
Trigger: TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCC...GACAGTGAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCCCTTACCAGCCCGGCTaGCTTTGTTCACTGTCATTT +
Preference number: 2 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLPYQPG*LCSLSF
Trigger: AAATGACAGTGAACAAAGCCAGCCGGGCTGGTAAGG...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp GTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACGGAGCACAGTTTTGCTaGAGTAGTGGTACGGCGTTA +
Preference number: 2 (lower is better)
Translates to: VAKRMSEKYCTVGRGSLNGAQFC*SSGTAL
Trigger: TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCC...GTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp AACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAAAGCGTTCTCCTCCTGTTCTaGAATGCTGTGGCAAAGCGC +
Preference number: 2 (lower is better)
Translates to: NQTPDRLSPTSSSQCLQSVLLLF*NAVAKR
Trigger: GCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAAC...GCTTTGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR TCA 90 bp CCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTGGCAAAGCGCATGTCTaGGAAGTACTGCACTGTGGG +
Preference number: 2 (lower is better)
Translates to: PGFLLVKGKGTRCGSPPVGKAHV*EVLHCG
Trigger: CCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCC...AACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp AGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGCCTTACCAGCCCGGCTaGCTTTGTTCACTGTCATTT +
Preference number: 2 (lower is better)
Translates to: RLEAAWFSLSKREGHTVWPYQPG*LCSLSF
Trigger: AAATGACAGTGAACAAAGCCAGCCGGGCTGGTAAGG...CCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp TCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGGGAGCACAGTTTTGCTaGAGTAGTGGTACGGCGTTA +
Preference number: 2 (lower is better)
Translates to: SSCSGMLWQSACLRSTALGAQFC*SSGTAL
Trigger: TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCC...CAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp AACCAACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAAATTCTTCAGGCTTCTaGTCACTGTTACCAGTCGGA +
Preference number: 2 (lower is better)
Translates to: NQPNPRPTVPNLFFPVSSNSSGF*SLLPVG
Trigger: TCCGACTGGTAACAGTGACCAGAAGCCTGAAGAATT...TGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR GCA 90 bp GTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACATGCAGTATCCCTACTaGAGTCTGAAAGCTGTAAAT +
Preference number: 2 (lower is better)
Translates to: VAKRMSEKYCTVGRGSLNMQYPY*SLKAVN
Trigger: ATTTACAGCTTTCAGACTGCAGTAGGGATACTGCAT...GTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp AAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTGGAGCACAGTTTTGCTaGAGTAGTGGTACGGCGTTA +
Preference number: 2 (lower is better)
Translates to: KLPGFLLVKGKGTRCGSPGAQFC*SSGTAL
Trigger: TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCC...AGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp AACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAAAGCAAGGGTCCGTGTACATaGAGACAGACAAGTTTCATA +
Preference number: 2 (lower is better)
Translates to: NQTPDRLSPTSSSQCLQSKGPCT*RQTSFI
Trigger: TATGAAACTTGTCTGTCTCCATGTACACGGACCCTT...GCTTTGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR GCA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGATGTCTGAGAAGTACTaGACTGTGGGCCGAGGGTCT +
Preference number: 2 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGMSEKY*TVGRGS
Trigger: AGACCCTCGGCCCACAGTGCAGTACTTCTCAGACAT...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp TGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTACCTGGTCAGAGCTGTTAAGGTATaGTTTGCTGTTGGCATTTTA +
Preference number: 2 (lower is better)
Translates to: CLRSTALWAEGLSTQYLVRAVKV*FAVGIL
Trigger: TAAAATGCCAACAGCAAACCATACCTTAACAGCTCT...GACCAGGTACTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp TGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACAAGAGCTGTTAAGGTATaGTTTGCTGTTGGCATTTTA +
Preference number: 2 (lower is better)
Translates to: WQSACLRSTALWAEGLSTRAVKV*FAVGIL
Trigger: TAAAATGCCAACAGCAAACCATACCTTAACAGCTCT...TGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR GCA 90 bp GGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGATTAATATGTTCTCATaGAGTATCCCTACTGCAGTC +
Preference number: 2 (lower is better)
Translates to: GVVLLLFWNAVAKRMSEKINMFS*SIPTAV
Trigger: GACTGCAGTAGGGATACTGCATGAGAACATATTAAT...CTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR GCA 90 bp AGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGATTAATATGTTCTCATaGAGTATCCCTACTGCAGTC +
Preference number: 2 (lower is better)
Translates to: RLEAAWFSLSKREGHTVWINMFS*SIPTAV
Trigger: GACTGCAGTAGGGATACTGCATGAGAACATATTAAT...CCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp TCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTCTCAACACAGTACCTaGTCAGTGAGCTTCTTAATT +
Preference number: 2 (lower is better)
Translates to: SSCSGMLWQSACLRSTALSQHST*SVSFLI
Trigger: AATTAAGAAGCTCACTGACCAGGTACTGTGTTGAGA...CAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp AAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTTCTCAACACAGTACCTaGTCAGTGAGCTTCTTAATT +
Preference number: 2 (lower is better)
Translates to: KLPGFLLVKGKGTRCGSPSQHST*SVSFLI
Trigger: AATTAAGAAGCTCACTGACCAGGTACTGTGTTGAGA...AGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp ACACAGTACCTGGTCAGTGAGCTTCTTAATTCTCCAGTCCAGAGAGTCTCTGTCAGAGCTGTTAAGGTATaGTTTGCTGTTGGCATTTTA +
Preference number: 2 (lower is better)
Translates to: TQYLVSELLNSPVQRVSVRAVKV*FAVGIL
Trigger: TAAAATGCCAACAGCAAACCATACCTTAACAGCTCT...GACAGAGACTCTCTGGACTGGAGAATTAAGAAGCTCACTGACCAGGTACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp AGAAAGAAATCTCTAAGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAATGTTCTGGAATGCTGTaGCAAAGCGCATGTCTGAGA +
Preference number: 2 (lower is better)
Translates to: RKKSLRLEAAWFSLSKRECSGML*QSACLR
Trigger: TCTCAGACATGCGCTTTGCCACAGCATTCCAGAACA...TTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCTTAGAGATTTCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGAGAGCTGTTAAGGTATaGTTTGCTGTTGGCATTTTA +
Preference number: 2 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGRAVKV*FAVGIL
Trigger: TAAAATGCCAACAGCAAACCATACCTTAACAGCTCT...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR CCA 90 bp AGAAAGAAATCTCTAAGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAATCTCAACACAGTACCTaGTCAGTGAGCTTCTTAATT +
Preference number: 2 (lower is better)
Translates to: RKKSLRLEAAWFSLSKRESQHST*SVSFLI
Trigger: AATTAAGAAGCTCACTGACCAGGTACTGTGTTGAGA...TTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCTTAGAGATTTCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR-3UTR GCA 90 bp GATGGGAAGGGCAACCTCATGTTTAGTCTAATATCTCAAAGCCATGGTTCATTTACTTGGGCTCATAAGTaGAAGTGCAATATTGAGTTT +
Preference number: 2 (lower is better)
Translates to: DGKGNLMFSLISQSHGSFTWAHK*KCNIEF
Trigger: AAACTCAATATTGCACTTGCACTTATGAGCCCAAGT...AAATGAACCATGGCTTTGAGATATTAGACTAAACATGAGGTTGCCCTTCCCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
3UTR TCA 72 bp CCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTaGGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAA +
Preference number: 3 (lower is better)
Translates to: PPVLECCGKAHV*EVLHCGPRVSQ
Trigger: TTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR GCA 72 bp TGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTaGACTGTGGGCCGAGGGTCTCTCAACACAGTACCT +
Preference number: 3 (lower is better)
Translates to: WNAVAKRMSEKY*TVGRGSLNTVP
Trigger: AGGTACTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR CCA 72 bp CTGCACTGTGGGCCGAGGGTCTCTCAACACAGTACCTaGTCAGTGAGCTTCTTAATTCTCCAGTCCAGAGAG +
Preference number: 3 (lower is better)
Translates to: LHCGPRVSQHST*SVSFLILQSRE
Trigger: CTCTCTGGACTGGAGAATTAAGAAGCTCACTGACCAGGTACTGTGTTGAGAGACCCTCGGCCCACAGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR CCA 72 bp CACACGGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTaGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGG +
Preference number: 3 (lower is better)
Translates to: HTVWFSSCSGML*QSACLRSTALW
Trigger: CCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR GCA 72 bp GGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTaGTGGAGTAGTGGTACGGCGTTAAGACTTGGAATG +
Preference number: 3 (lower is better)
Translates to: GFWSLLPVGAQF*WSSGTALRLGM
Trigger: CATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
ENSMUST00000220290.2
3UTR CCA 72 bp TTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTaGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTC +
Preference number: 3 (lower is better)
Translates to: FWSLLPVGAQFC*SSGTALRLGMV
Trigger: GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
ENSMUST00000220290.2
3UTR CCA 72 bp TGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTaGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGC +
Preference number: 3 (lower is better)
Translates to: WFSLSKREGHTV*FSSCSGMLWQS
Trigger: GCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
3UTR TCA 72 bp ACTTCAAATAGCAAAAGTAGCTTAACTTACTGCTCGTaGGTGTGTGCGTGCGTGTGTGCGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: TSNSKSSLTYCS*VCACVCACVCV
Trigger: CACACACACACACGCACACACGCACGCACACACTCACGAGCAGTAAGTTAAGCTACTTTTGCTATTTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
3UTR CCA 72 bp GAGATTACCTGCTCAGTAGCAAAGGGTCCGTGTACATaGAGACAGACAAGTTTCATACAAAGCAAGTGTTCA +
Preference number: 3 (lower is better)
Translates to: EITCSVAKGPCT*RQTSFIQSKCS
Trigger: TGAACACTTGCTTTGTATGAAACTTGTCTGTCTCCATGTACACGGACCCTTTGCTACTGAGCAGGTAATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp AGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCACTCGGTGGTGGGGCTaGTACTCTCCCACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: REGHTVWFSSCSGMLWQSTRWWG*YSPTSS
Trigger: GGAGGACGTGGGAGAGTACCAGCCCCACCACCGAGT...GCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACCGTGTGCCCTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCTCGGTCACTCGGTGGTaGGGCTGGTACTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: REGHTVWFSSCSGMLWQSSVTRW*GWYSPT
Trigger: CGTGGGAGAGTACCAGCCCCACCACCGAGTGACCGA...GCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACCGTGTGCCCTTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCACTGTCGGCCTCTGTTTCTACTaGGAGCACACTGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: APVQVNSALPARLALFTVGLCFY*EHTGPC
Trigger: GCAGGGGCCAGTGTGCTCCCAGTAGAAACAGAGGCC...GACAGTGAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCGTGCCGGCCTGTCTATaGGGGTACTTGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLVPACL*GYLLLW
Trigger: CCAGAGAAGCAAGTACCCTCATAGACAGGCCGGCAC...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCTCCAGGGCCAGGCACTaGGCCCTCTCCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVSRARH*ALSRRA
Trigger: AGCCCTCCTGGAGAGGGCTCAGTGCCTGGCCCTGGA...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTCCGCAGGCGGGGAGTaGTTTGCCTCTCAACCGGAG +
Preference number: 4 (lower is better)
Translates to: QSACLRSTALWAEGLSTQSAGGE*FASQPE
Trigger: CTCCGGTTGAGAGGCAAAGCACTCCCCGCCTGCGGA...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp GCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCACTGTCGCTCTTCCCTTATGGTaGCCTCGGTCACTCGGTGGT +
Preference number: 4 (lower is better)
Translates to: APVQVNSALPARLALFTVALPLW*PRSLGG
Trigger: ACCACCGAGTGACCGAGGGCACCATAAGGGAAGAGC...GACAGTGAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp CCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTTCCAGGGCCAGGCACTaGGCCCTCTCCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PGFLLVKGKGTRCGSPPVSRARH*ALSRRA
Trigger: AGCCCTCCTGGAGAGGGCTCAGTGCCTGGCCCTGGA...AACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp ATAACAGCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCCTCCTTGGAGGCATCTaGTCCAGCCTGGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: ITAPVQVNSALPARLALFLLGGI*SSLVRA
Trigger: GGCTCTGACCAGGCTGGAGCAGATGCCTCCAAGGAG...GAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGCTGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCCTGAGCCATTTCTTCTaGGTCACCCTTGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLLSHFF*VTLGPT
Trigger: AGTCGGGCCAAGGGTGACGCAGAAGAAATGGCTCAG...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACATGCTTCTCTGGTCTGTaGCTGCGTGCGGCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: WQSACLRSTALWAEGLSTCFSGL*LRAAAV
Trigger: TACAGCGGCCGCACGCAGGCACAGACCAGAGAAGCA...TGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp GCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCACTGTCCCTCACTCTCACTGCTaGTGCTGCTGCTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: APVQVNSALPARLALFTVPHSHC*CCCSQK
Trigger: CTTCTGAGAGCAGCAGCAGCAGCAGTGAGAGTGAGG...GACAGTGAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp GGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGGACGGCGTCGGGCACTaGTGCCTCCCTCTCTACTAC +
Preference number: 4 (lower is better)
Translates to: GVVLLLFWNAVAKRMSEKDGVGH*CLPLYY
Trigger: GTAGTAGAGAGGGAGGCAGCAGTGCCCGACGCCGTC...CTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCGCATCTGCTCCAGCCTaGTCAGAGCCCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLASAPA*SEPFFT
Trigger: AGTGAAGAAGGGCTCTGACCAGGCTGGAGCAGATGC...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCCTTCTGCGTCACCCTTaGCCCGACTCTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLLLRHP*PDSLLQ
Trigger: CTGAAGAAGAGAGTCGGGCCAAGGGTGACGCAGAAG...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGCCCTCGGTCACTCGGTaGTGGGGCTGGTACTCTCCC +
Preference number: 4 (lower is better)
Translates to: PVGAQFCWSSGTALRLGMPSVTR*WGWYSP
Trigger: GGGAGAGTACCAGCCCCACCACCGAGTGACCGAGGG...CATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGCCCTGCTTGTCTGTCTaGGACGGCGTCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: LQASGHCYQSEHSFAGVVPCLSV*DGVGHC
Trigger: GCAGTGCCCGACGCCGTCCCAGACAGACAAGCAGGG...CACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AACCAACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCACTCTCGCTTCCCGTATaGCCTGAGCCAGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: NQPNPRPTVPNLFFPVSSLSLPV*PEPAPD
Trigger: ATCAGGCGCTGGCTCAGGCCATACGGGAAGCGAGAG...TGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR TCA 90 bp TGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACAGTGCCGGCCTGTCTATaGGGGTACTTGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: WQSACLRSTALWAEGLSTVPACL*GYLLLW
Trigger: CCAGAGAAGCAAGTACCCTCATAGACAGGCCGGCAC...TGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGTCCGCAGGCGGGGAGTaGTTTGCCTCTCAACCGGAG +
Preference number: 4 (lower is better)
Translates to: LQASGHCYQSEHSFAGVVSAGGE*FASQPE
Trigger: CTCCGGTTGAGAGGCAAAGCACTCCCCGCCTGCGGA...CACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTTCCGCAGGCGGGGAGTaGTTTGCCTCTCAACCGGAG +
Preference number: 4 (lower is better)
Translates to: SGFWSLLPVGAQFCWSSGSAGGE*FASQPE
Trigger: CTCCGGTTGAGAGGCAAAGCACTCCCCGCCTGCGGA...ACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCTCCGCAGGCGGGGAGTaGTTTGCCTCTCAACCGGAG +
Preference number: 4 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVSAGGE*FASQPE
Trigger: CTCCGGTTGAGAGGCAAAGCACTCCCCGCCTGCGGA...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGCCTCCTCACTCTCACTaGTGCTGCTGCTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: QSACLRSTALWAEGLSTQPPHSH*CCCCSQ
Trigger: CTGAGAGCAGCAGCAGCAGCAGTGAGAGTGAGGAGG...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp GGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTGGCGTCGGGCACTGCTaGCTCCCTCTCTACTACCTT +
Preference number: 4 (lower is better)
Translates to: GWKLPGFLLVKGKGTRCGGVGHC*LPLYYL
Trigger: AAGGTAGTAGAGAGGGAGGCAGCAGTGCCCGACGCC...ACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp AGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGGGCGTCGGGCACTGCTaGCTCCCTCTCTACTACCTT +
Preference number: 4 (lower is better)
Translates to: RLEAAWFSLSKREGHTVWGVGHC*LPLYYL
Trigger: AAGGTAGTAGAGAGGGAGGCAGCAGTGCCCGACGCC...CCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAGACGGCGTCGGGCACTaGTGCCTCCCTCTCTACTAC +
Preference number: 4 (lower is better)
Translates to: WSLLPVGAQFCWSSGTALDGVGH*CLPLYY
Trigger: GTAGTAGAGAGGGAGGCAGCAGTGCCCGACGCCGTC...TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp AACCAACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAGGTCCTGCTCAGCAGTaGCTCCGTGTGCACCCTTTT +
Preference number: 4 (lower is better)
Translates to: NQPNPRPTVPNLFFPVSSGPAQQ*LRVHPF
Trigger: AAAAGGGTGCACACGGAGGCACTGCTGAGCAGGACC...TGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCACTGTCTCAGAGTCCTTGGCATaGTGCAGGTCAACACCGTAC +
Preference number: 4 (lower is better)
Translates to: APVQVNSALPARLALFTVSESLA*CRSTPY
Trigger: GTACGGTGTTGACCTGCACCATGCCAAGGACTCTGA...GACAGTGAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGACTCGGTGGTGGGGCTaGTACTCTCCCACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PVGAQFCWSSGTALRLGMTRWWG*YSPTSS
Trigger: GGAGGACGTGGGAGAGTACCAGCCCCACCACCGAGT...CATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTATCGGTCACTCGGTGGTaGGGCTGGTACTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: QASGHCYQSEHSFAGVVVSVTRW*GWYSPT
Trigger: CGTGGGAGAGTACCAGCCCCACCACCGAGTGACCGA...TACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCCTCGGTCACTCGGTaGTGGGGCTGGTACTCTCCC +
Preference number: 4 (lower is better)
Translates to: WKLPGFLLVKGKGTRCGSPSVTR*WGWYSP
Trigger: GGGAGAGTACCAGCCCCACCACCGAGTGACCGAGGG...AGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGACCCTCGGTCACTCGGTaGTGGGGCTGGTACTCTCCC +
Preference number: 4 (lower is better)
Translates to: LPVGAQFCWSSGTALRLGPSVTR*WGWYSP
Trigger: GGGAGAGTACCAGCCCCACCACCGAGTGACCGAGGG...TCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTCCCTCGGTCACTCGGTaGTGGGGCTGGTACTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLPVGAQFCWSSGTALRLPSVTR*WGWYSP
Trigger: GGGAGAGTACCAGCCCCACCACCGAGTGACCGAGGG...AAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGCCTGCTCTTCCCTTATaGTGCCCTCGGTCACTCGGT +
Preference number: 4 (lower is better)
Translates to: QSACLRSTALWAEGLSTQPALPL*CPRSLG
Trigger: ACCGAGTGACCGAGGGCACCATAAGGGAAGAGCAGG...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACCTGCTCTTCCCTTATaGTGCCCTCGGTCACTCGGT +
Preference number: 4 (lower is better)
Translates to: WQSACLRSTALWAEGLSTPALPL*CPRSLG
Trigger: ACCGAGTGACCGAGGGCACCATAAGGGAAGAGCAGG...TGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AACCAACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCACCCTCTCTACTACCTTaGCTCCTTGGCCGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: NQPNPRPTVPNLFFPVSSPSLLP*LLGRAL
Trigger: AAGAGCCCGGCCAAGGAGCCAAGGTAGTAGAGAGGG...TGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACCCTCTCTACTACCTTaGCTCCTTGGCCGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: WQSACLRSTALWAEGLSTPSLLP*LLGRAL
Trigger: AAGAGCCCGGCCAAGGAGCCAAGGTAGTAGAGAGGG...TGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTTGCTTCTCTGGTCTGTaGCTGCGTGCGGCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: SGFWSLLPVGAQFCWSSGCFSGL*LRAAAV
Trigger: TACAGCGGCCGCACGCAGGCACAGACCAGAGAAGCA...ACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGGGTGGAGTCTTTGTGTaGCACAGGCTCCACCTTACG +
Preference number: 4 (lower is better)
Translates to: QSACLRSTALWAEGLSTQGGVFV*HRLHLT
Trigger: CGTAAGGTGGAGCCTGTGGCACACAAAGACTCCACC...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTCTCACTGCTGCTGCTaGTGCTCTCAGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: QSACLRSTALWAEGLSTQSHCCC*CSQKTG
Trigger: CCCTGTCTTCTGAGAGCAGCAGCAGCAGCAGTGAGA...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACATCTCACTGCTGCTGCTaGTGCTCTCAGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: WQSACLRSTALWAEGLSTSHCCC*CSQKTG
Trigger: CCCTGTCTTCTGAGAGCAGCAGCAGCAGCAGTGAGA...TGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp AACCAACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCACCTCACTCTCACTGCTaGTGCTGCTGCTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: NQPNPRPTVPNLFFPVSSPHSHC*CCCSQK
Trigger: CTTCTGAGAGCAGCAGCAGCAGCAGTGAGAGTGAGG...TGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGGCGTCGGGCACTGCTaGCTCCCTCTCTACTACCTT +
Preference number: 4 (lower is better)
Translates to: PVGAQFCWSSGTALRLGMGVGHC*LPLYYL
Trigger: AAGGTAGTAGAGAGGGAGGCAGCAGTGCCCGACGCC...CATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGACGGCGTCGGGCACTaGTGCCTCCCTCTCTACTAC +
Preference number: 4 (lower is better)
Translates to: LLPVGAQFCWSSGTALRLDGVGH*CLPLYY
Trigger: GTAGTAGAGAGGGAGGCAGCAGTGCCCGACGCCGTC...AAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACAGCATCTGCTCCAGCCTaGTCAGAGCCCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: WQSACLRSTALWAEGLSTASAPA*SEPFFT
Trigger: AGTGAAGAAGGGCTCTGACCAGGCTGGAGCAGATGC...TGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AACCAACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAGCATCTGCTCCAGCCTaGTCAGAGCCCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: NQPNPRPTVPNLFFPVSSASAPA*SEPFFT
Trigger: AGTGAAGAAGGGCTCTGACCAGGCTGGAGCAGATGC...TGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTACCTGGTCTTTCCTCCAACTCCTTaGTGTGGGCCGGGGCAAACT +
Preference number: 4 (lower is better)
Translates to: CLRSTALWAEGLSTQYLVFPPTP*CGPGQT
Trigger: AGTTTGCCCCGGCCCACACCAAGGAGTTGGAGGAAA...GACCAGGTACTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCCAAGAACTTGGTCTTTaGTGGCTGCTCTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLQELGL*WLLWRH
Trigger: GTGTCTCCAGAGCAGCCACCAAAGACCAAGTTCTTG...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGGGTGTAGCTTTTGTTaGGCTTTTGCTGTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: REGHTVWFSSCSGMLWQSGCSFC*AFAVPP
Trigger: CGGAGGGACAGCAAAAGCCCAACAAAAGCTACACCC...GCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACCGTGTGCCCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTACTCGGTGGTGGGGCTaGTACTCTCCCACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: WKLPGFLLVKGKGTRCGSTRWWG*YSPTSS
Trigger: GGAGGACGTGGGAGAGTACCAGCCCCACCACCGAGT...AGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTTCGGTCACTCGGTGGTaGGGCTGGTACTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: WKLPGFLLVKGKGTRCGSSVTRW*GWYSPT
Trigger: CGTGGGAGAGTACCAGCCCCACCACCGAGTGACCGA...AGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCCTCTCGCTTCCCGTATaGCCTGAGCCAGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVLSLPV*PEPAPD
Trigger: ATCAGGCGCTGGCTCAGGCCATACGGGAAGCGAGAG...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
ENSMUST00000220290.2
CDS-3UTR TCA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTCCAGGTGCTTCCTCTaGGCCATTTCTTCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: QSACLRSTALWAEGLSTQSRCFL*AISSAS
Trigger: TGACGCAGAAGAAATGGCTCAGAGGAAGCACCTGGA...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp ATAACAGCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCTCCAGGTGCTTCCTCTaGGCCATTTCTTCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: ITAPVQVNSALPARLALFSRCFL*AISSAS
Trigger: TGACGCAGAAGAAATGGCTCAGAGGAAGCACCTGGA...GAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGCTGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp AACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAAAGCTTCTTGGTAGCTTTCTaGGAGGCCACCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: NQTPDRLSPTSSSQCLQSFLVAF*EATSAF
Trigger: GAAGGCAGAGGTGGCCTCTCAGAAAGCTACCAAGAA...GCTTTGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCGGAGATAAGCCCCTGTaGGTTTTATGCAGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLGDKPL*VLCSSD
Trigger: GTCAGAACTGCATAAAACTCACAGGGGCTTATCTCC...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp TGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTACCTGGTCGCGTTCTCTAAGAACTaGGAGTCGGCTTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: CLRSTALWAEGLSTQYLVAFSKN*ESACAG
Trigger: TCCAGCACAAGCCGACTCTCAGTTCTTAGAGAACGC...GACCAGGTACTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp TCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGGTGCCGGCCTGTCTATaGGGGTACTTGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SSCSGMLWQSACLRSTALVPACL*GYLLLW
Trigger: CCAGAGAAGCAAGTACCCTCATAGACAGGCCGGCAC...CAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp GTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACTGTGGTTGTCGTTGTTaGCGCGGACTCAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: VAKRMSEKYCTVGRGSLNCGCRC*RGLRCD
Trigger: ATCACATCTGAGTCCGCGTCAACAACGACAACCACA...GTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp AGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGAGCTGCGTCTCCTGTaGTCACAATGCGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: REGHTVWFSSCSGMLWQSELRLL*SQCVSQ
Trigger: TTGAGAAACGCATTGTGATCACAGGAGACGCAGCTC...GCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACCGTGTGCCCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR GCA 90 bp AGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCTTTCAAGGCTGGTTTTaGTTCCCTGACCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: REGHTVWFSSCSGMLWQSFQGWF*FPDLHL
Trigger: CAGGTGGAGGTCAGGGAAGCAAAACCAGCCTTGAAA...GCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACCGTGTGCCCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp GTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACTTTCAAGGCTGGTTTTaGTTCCCTGACCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: VAKRMSEKYCTVGRGSLNFQGWF*FPDLHL
Trigger: CAGGTGGAGGTCAGGGAAGCAAAACCAGCCTTGAAA...GTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp GTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACTGTCTCCCTTTTGGCTaGACCTCCTTCCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: VAKRMSEKYCTVGRGSLNCLPFG*TSFQFL
Trigger: GAGAAACTGGAAGGAGGTGCAGCCAAAAGGGAGACA...GTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTTGGTCTTTGGTGGCTaGTCTGGAGACACAAGCCTG +
Preference number: 4 (lower is better)
Translates to: QSACLRSTALWAEGLSTQLVFGG*SGDTSL
Trigger: CAGGCTTGTGTCTCCAGAGCAGCCACCAAAGACCAA...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp ATAACAGCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCTTGGTCTTTGGTGGCTaGTCTGGAGACACAAGCCTG +
Preference number: 4 (lower is better)
Translates to: ITAPVQVNSALPARLALFLVFGG*SGDTSL
Trigger: CAGGCTTGTGTCTCCAGAGCAGCCACCAAAGACCAA...GAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGCTGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp GGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTCTCACTGCTGCTGCTaGTGCTCTCAGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: GVVLLLFWNAVAKRMSEKSHCCC*CSQKTG
Trigger: CCCTGTCTTCTGAGAGCAGCAGCAGCAGCAGTGAGA...CTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGCCTCCTCACTCTCACTaGTGCTGCTGCTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PVGAQFCWSSGTALRLGMPPHSH*CCCCSQ
Trigger: CTGAGAGCAGCAGCAGCAGCAGTGAGAGTGAGGAGG...CATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCCCTCCTCACTCTCACTaGTGCTGCTGCTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVPPHSH*CCCCSQ
Trigger: CTGAGAGCAGCAGCAGCAGCAGTGAGAGTGAGGAGG...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTCCTCCTCACTCTCACTaGTGCTGCTGCTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SGFWSLLPVGAQFCWSSGPPHSH*CCCCSQ
Trigger: CTGAGAGCAGCAGCAGCAGCAGTGAGAGTGAGGAGG...ACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGCTCTTCCCTTATGGTaGCCTCGGTCACTCGGTGGT +
Preference number: 4 (lower is better)
Translates to: LQASGHCYQSEHSFAGVVALPLW*PRSLGG
Trigger: ACCACCGAGTGACCGAGGGCACCATAAGGGAAGAGC...CACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTGTGCGGGTCTTCCTCTaGTTCTTCTCTCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SGFWSLLPVGAQFCWSSGVRVFL*FFSRVL
Trigger: CAGGACCCGAGAGAAGAAGCAGAGGAAGACCCGCAC...ACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR CCA 90 bp AGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCTGCTTTTCAAGGCTaGTTTTGCTTCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: REGHTVWFSSCSGMLWQSAAFQG*FCFPDL
Trigger: GAGGTCAGGGAAGCAAAACCAGCCTTGAAAAGCAGC...GCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACCGTGTGCCCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCACTGTCACAACACTTGTCCCTTaGCACGTTTCTCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: APVQVNSALPARLALFTVTTLVP*HVSQGH
Trigger: GTGACCTTGAGAAACGTGCCAAGGGACAAGTGTTGT...GACAGTGAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTACCTGGTCTCAGAGTCCTTGGCATaGTGCAGGTCAACACCGTAC +
Preference number: 4 (lower is better)
Translates to: CLRSTALWAEGLSTQYLVSESLA*CRSTPY
Trigger: GTACGGTGTTGACCTGCACCATGCCAAGGACTCTGA...GACCAGGTACTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTACCTGGTCCACCTTCAGAGTCCTTaGCATGGTGCAGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: CLRSTALWAEGLSTQYLVHLQSP*HGAGQH
Trigger: GTGTTGACCTGCACCATGCCAAGGACTCTGAAGGTG...GACCAGGTACTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAAAGCCACCTTCAGAGTCCTTaGCATGGTGCAGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: NQTPDRLSPTSSSQCLQSHLQSP*HGAGQH
Trigger: GTGTTGACCTGCACCATGCCAAGGACTCTGAAGGTG...GCTTTGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAAAGCCCAGGGTCAAGAACTTaGTCTTTGGTGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: NQTPDRLSPTSSSQCLQSPGSRT*SLVAAL
Trigger: CAGAGCAGCCACCAAAGACCAAGTTCTTGACCCTGG...GCTTTGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTGCTTCTCCCATTCACTaGGGCGAGGCTCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: WKLPGFLLVKGKGTRCGSASPIH*GEAQVW
Trigger: CCACACCTGAGCCTCGCCCCAGTGAATGGGAGAAGC...AGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp AACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAAAGCGAACTCGCTTGTGGTTaGAAAGGCAGAGGTGTGACC +
Preference number: 4 (lower is better)
Translates to: NQTPDRLSPTSSSQCLQSELACG*KGRGVT
Trigger: GGTCACACCTCTGCCTTTCCAACCACAAGCGAGTTC...GCTTTGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
CDS-3UTR CCA 90 bp ACACAGTACCTGGTCAGTGAGCTTCTTAATTCTCCAGTCCAGAGAGTCTCTGTCTCGGTCACTCGGTGGTaGGGCTGGTACTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: TQYLVSELLNSPVQRVSVSVTRW*GWYSPT
Trigger: CGTGGGAGAGTACCAGCCCCACCACCGAGTGACCGA...GACAGAGACTCTCTGGACTGGAGAATTAAGAAGCTCACTGACCAGGTACTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGCCTGCTCTTCCCTTATaGTGCCCTCGGTCACTCGGT +
Preference number: 4 (lower is better)
Translates to: LQASGHCYQSEHSFAGVVPALPL*CPRSLG
Trigger: ACCGAGTGACCGAGGGCACCATAAGGGAAGAGCAGG...CACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACCTGCTCTTCCCTTATaGTGCCCTCGGTCACTCGGT +
Preference number: 4 (lower is better)
Translates to: QASGHCYQSEHSFAGVVVPALPL*CPRSLG
Trigger: ACCGAGTGACCGAGGGCACCATAAGGGAAGAGCAGG...TACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGCTACTGGGAGCACACTaGCCCCTGCTTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PVGAQFCWSSGTALRLGMLLGAH*PLLVCL
Trigger: CAGACAGACAAGCAGGGGCCAGTGTGCTCCCAGTAG...CATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTCTACTGGGAGCACACTaGCCCCTGCTTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SGFWSLLPVGAQFCWSSGLLGAH*PLLVCL
Trigger: CAGACAGACAAGCAGGGGCCAGTGTGCTCCCAGTAG...ACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTTCAATCTTGGCTCCTTaGCCGGGCTCTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGFWSLLPVGAQFCWSSGSILAP*PGSSSS
Trigger: GCTGGAGGAAGAGCCCGGCCAAGGAGCCAAGATTGA...ACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217929.2
CDS-3UTR TCA 90 bp GGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTCCAGGTGCTTCCTCTaGGCCATTTCTTCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: GVVLLLFWNAVAKRMSEKSRCFL*AISSAS
Trigger: TGACGCAGAAGAAATGGCTCAGAGGAAGCACCTGGA...CTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp GGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTCACACACACCCAGCTTaGTGTCCACACCTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: GWKLPGFLLVKGKGTRCGHTHPA*CPHLQS
Trigger: ACTCTGAAGGTGTGGACATCAAGCTGGGTGTGTGTG...ACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp AGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGCACACACACCCAGCTTaGTGTCCACACCTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: RLEAAWFSLSKREGHTVWHTHPA*CPHLQS
Trigger: ACTCTGAAGGTGTGGACATCAAGCTGGGTGTGTGTG...CCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGAGGACCATGCCCCGGTaGCATCTCTTTACCATTCAT +
Preference number: 4 (lower is better)
Translates to: QSACLRSTALWAEGLSTQRTMPR*HLFTIH
Trigger: ATGAATGGTAAAGAGATGTCACCGGGGCATGGTCCT...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp GGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGACGCGGACTCAGATGTaGTGGTTTGTGCGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: GVVLLLFWNAVAKRMSEKTRTQM*WFVRSV
Trigger: TACTGACCGCACAAACCATCACATCTGAGTCCGCGT...CTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp ATAACAGCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCGAGCTGCGTCTCCTGTaGTCACAATGCGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: ITAPVQVNSALPARLALFELRLL*SQCVSQ
Trigger: TTGAGAAACGCATTGTGATCACAGGAGACGCAGCTC...GAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGCTGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR GCA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCCTGAGCCATTTCTTCTaGGTCACCCTTGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVLSHFF*VTLGPT
Trigger: AGTCGGGCCAAGGGTGACGCAGAAGAAATGGCTCAG...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp AACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAAAGCTTTCAAGGCTGGTTTTaGTTCCCTGACCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: NQTPDRLSPTSSSQCLQSFQGWF*FPDLHL
Trigger: CAGGTGGAGGTCAGGGAAGCAAAACCAGCCTTGAAA...GCTTTGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGGTCTCCCCAGGACCATaGCCCGGTGACATCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SSCSGMLWQSACLRSTALVSPGP*PGDISL
Trigger: TAAAGAGATGTCACCGGGGCATGGTCCTGGGGAGAC...CAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTGTCTCCCCAGGACCATaGCCCGGTGACATCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SGFWSLLPVGAQFCWSSGVSPGP*PGDISL
Trigger: TAAAGAGATGTCACCGGGGCATGGTCCTGGGGAGAC...ACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTGCTCTTCCCTTATGGTaGCCTCGGTCACTCGGTGGT +
Preference number: 4 (lower is better)
Translates to: PGFLLVKGKGTRCGSPPVALPLW*PRSLGG
Trigger: ACCACCGAGTGACCGAGGGCACCATAAGGGAAGAGC...AACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp GGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCATCACACTCCTCCTaGTCTTCCCTTATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GWKLPGFLLVKGKGTRCGSSHSS*SSLMVP
Trigger: GGGCACCATAAGGGAAGAGCAGGAGGAGTGTGATGA...ACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAGTGCGGGTCTTCCTCTaGTTCTTCTCTCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LPVGAQFCWSSGTALRLGVRVFL*FFSRVL
Trigger: CAGGACCCGAGAGAAGAAGCAGAGGAAGACCCGCAC...TCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR GCA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACTCTGTTTCTTTGTaGACTACCACCCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLNSVSL*TTTLVT
Trigger: GGTCACAAGGGTGGTAGTGCACAAAGAAACAGAGTT...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp GCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCACTGTCCTCTGGCTCAGATACTaGAGTCTGCTCATTTTCTAC +
Preference number: 4 (lower is better)
Translates to: APVQVNSALPARLALFTVLWLRY*SLLIFY
Trigger: GTAGAAAATGAGCAGACTCCAGTATCTGAGCCAGAG...GACAGTGAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAAAGCGCTGCTTTTCAAGGCTaGTTTTGCTTCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: NQTPDRLSPTSSSQCLQSAAFQG*FCFPDL
Trigger: GAGGTCAGGGAAGCAAAACCAGCCTTGAAAAGCAGC...GCTTTGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCTTTCCTCCAACTCCTTaGTGTGGGCCGGGGCAAACT +
Preference number: 4 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVFPPTP*CGPGQT
Trigger: AGTTTGCCCCGGCCCACACCAAGGAGTTGGAGGAAA...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTCAGAGTCCTTGGCATaGTGCAGGTCAACACCGTAC +
Preference number: 4 (lower is better)
Translates to: RLEAAWFSLSKREGHTVWSESLA*CRSTPY
Trigger: GTACGGTGTTGACCTGCACCATGCCAAGGACTCTGA...CCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACTTTGGTGGCTGCTCTaGAGACACAAGCCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: WQSACLRSTALWAEGLSTLWWLL*RHKPVE
Trigger: TTCTACAGGCTTGTGTCTCCAGAGCAGCCACCAAAG...TGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTACCTGGTCCTTTGGTGGCTGCTCTaGAGACACAAGCCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: CLRSTALWAEGLSTQYLVLWWLL*RHKPVE
Trigger: TTCTACAGGCTTGTGTCTCCAGAGCAGCCACCAAAG...GACCAGGTACTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGGAACTTGGTCTTTGGTaGCTGCTCTGGAGACACAAG +
Preference number: 4 (lower is better)
Translates to: QSACLRSTALWAEGLSTQELGLW*LLWRHK
Trigger: CTTGTGTCTCCAGAGCAGCCACCAAAGACCAAGTTC...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACAGAACTTGGTCTTTGGTaGCTGCTCTGGAGACACAAG +
Preference number: 4 (lower is better)
Translates to: WQSACLRSTALWAEGLSTELGLW*LLWRHK
Trigger: CTTGTGTCTCCAGAGCAGCCACCAAAGACCAAGTTC...TGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AACCAACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAGAACTTGGTCTTTGGTaGCTGCTCTGGAGACACAAG +
Preference number: 4 (lower is better)
Translates to: NQPNPRPTVPNLFFPVSSELGLW*LLWRHK
Trigger: CTTGTGTCTCCAGAGCAGCCACCAAAGACCAAGTTC...TGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGCCAGGGTCAAGAACTTaGTCTTTGGTGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RLEAAWFSLSKREGHTVWPGSRT*SLVAAL
Trigger: CAGAGCAGCCACCAAAGACCAAGTTCTTGACCCTGG...CCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTACCTGGTCCCTGATGTTTCAGAATaGCCTCCTGGGCCTTATCCA +
Preference number: 4 (lower is better)
Translates to: CLRSTALWAEGLSTQYLVPDVSE*PPGPYP
Trigger: TGGATAAGGCCCAGGAGGCCATTCTGAAACATCAGG...GACCAGGTACTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp CCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTCCCTCTCTACTACCTTaGCTCCTTGGCCGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PGFLLVKGKGTRCGSPPVPSLLP*LLGRAL
Trigger: AAGAGCCCGGCCAAGGAGCCAAGGTAGTAGAGAGGG...AACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGCCCTGCTTGTCTGTCTaGGACGGCGTCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGPCLSV*DGVGHC
Trigger: GCAGTGCCCGACGCCGTCCCAGACAGACAAGCAGGG...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGACTACTGGGAGCACACTaGCCCCTGCTTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LPVGAQFCWSSGTALRLGLLGAH*PLLVCL
Trigger: CAGACAGACAAGCAGGGGCCAGTGTGCTCCCAGTAG...TCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp ACACAGTACCTGGTCAGTGAGCTTCTTAATTCTCCAGTCCAGAGAGTCTCTGTCGGCCTCTGTTTCTACTaGGAGCACACTGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: TQYLVSELLNSPVQRVSVGLCFY*EHTGPC
Trigger: GCAGGGGCCAGTGTGCTCCCAGTAGAAACAGAGGCC...GACAGAGACTCTCTGGACTGGAGAATTAAGAAGCTCACTGACCAGGTACTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACTGGGGACTTCCTTGGTaGAGATTTCTGTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: VAKRMSEKYCTVGRGSLNWGLPW*RFLSFV
Trigger: CACAAAGGACAGAAATCTCCACCAAGGAAGTCCCCA...GTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp AGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCTGGGGACTTCCTTGGTaGAGATTTCTGTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: REGHTVWFSSCSGMLWQSWGLPW*RFLSFV
Trigger: CACAAAGGACAGAAATCTCCACCAAGGAAGTCCCCA...GCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACCGTGTGCCCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp GCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCACTGTCCAATGGGGACTTCCTTaGTGGAGATTTCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: APVQVNSALPARLALFTVQWGLP*WRFLSF
Trigger: AAAGGACAGAAATCTCCACCAAGGAAGTCCCCATTG...GACAGTGAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp TGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTACCTGGTCCCCGCCGTCAATCTGTaGAGACTCATATGTGATGGT +
Preference number: 4 (lower is better)
Translates to: CLRSTALWAEGLSTQYLVPAVNL*RLICDG
Trigger: ACCATCACATATGAGTCTCCACAGATTGACGGCGGG...GACCAGGTACTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCGGTATTTTTCTGCTCTaGGGACATCTCTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLGIFLL*GHLCIF
Trigger: GAAGATGCAGAGATGTCCCCAGAGCAGAAAAATACC...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS-3UTR TCA 90 bp CTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGTTCTTGGTAGCTTTCTaGGAGGCCACCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LQASGHCYQSEHSFAGVVFLVAF*EATSAF
Trigger: GAAGGCAGAGGTGGCCTCTCAGAAAGCTACCAAGAA...CACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCTTCTTGGTAGCTTTCTaGGAGGCCACCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVFLVAF*EATSAF
Trigger: GAAGGCAGAGGTGGCCTCTCAGAAAGCTACCAAGAA...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp AACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAAAGCGGAGATAAGCCCCTGTaGGTTTTATGCAGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: NQTPDRLSPTSSSQCLQSGDKPL*VLCSSD
Trigger: GTCAGAACTGCATAAAACTCACAGGGGCTTATCTCC...GCTTTGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp ATGCACATGGCTAGACTCTATATTATAAGGGGGAACATAACAAAAACAGGAGGGTCCAGGGCCAGGCACTaGGCCCTCTCCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: MHMARLYIIRGNITKTGGSRARH*ALSRRA
Trigger: AGCCCTCCTGGAGAGGGCTCAGTGCCTGGCCCTGGA...CCCTCCTGTTTTTGTTATGTTCCCCCTTATAATATAGAGTCTAGCCATGTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp AGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGAGGACCATGCCCCGGTaGCATCTCTTTACCATTCAT +
Preference number: 4 (lower is better)
Translates to: RLEAAWFSLSKREGHTVWRTMPR*HLFTIH
Trigger: ATGAATGGTAAAGAGATGTCACCGGGGCATGGTCCT...CCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCGTGGAGACTCATATGTaGTGGTTTTGGTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLVETHM*WFWSQF
Trigger: AAACTGAGACCAAAACCATCACATATGAGTCTCCAC...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR TCA 90 bp TCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGACGCGGACTCAGATGTaGTGGTTTGTGCGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: SSCSGMLWQSACLRSTALTRTQM*WFVRSV
Trigger: TACTGACCGCACAAACCATCACATCTGAGTCCGCGT...CAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp TGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACTTTCACAGTCTTGGTaGTGTGTGTGGTTGTCGTTG +
Preference number: 4 (lower is better)
Translates to: WQSACLRSTALWAEGLSTLSQSW*CVWLSL
Trigger: CAACGACAACCACACACATCACCAAGACTGTGAAAG...TGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGCTTTCACAGTCTTGGTaGTGTGTGTGGTTGTCGTTG +
Preference number: 4 (lower is better)
Translates to: QSACLRSTALWAEGLSTQLSQSW*CVWLSL
Trigger: CAACGACAACCACACACATCACCAAGACTGTGAAAG...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTCTGAGCCATTTCTTCTaGGTCACCCTTGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: WFSSCSGMLWQSACLRSTLSHFF*VTLGPT
Trigger: AGTCGGGCCAAGGGTGACGCAGAAGAAATGGCTCAG...AGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCTGAGCCATTTCTTCTaGGTCACCCTTGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: WKLPGFLLVKGKGTRCGSLSHFF*VTLGPT
Trigger: AGTCGGGCCAAGGGTGACGCAGAAGAAATGGCTCAG...AGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGCTGGGTCTCCACGCTaGTTTTCAAGGCTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LQASGHCYQSEHSFAGVVAGSPR*FSRLVL
Trigger: CAAAACCAGCCTTGAAAAGCAGCGTGGAGACCCAGC...CACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGCTGGGTCTCCACGCTaGTTTTCAAGGCTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PVGAQFCWSSGTALRLGMAGSPR*FSRLVL
Trigger: CAAAACCAGCCTTGAAAAGCAGCGTGGAGACCCAGC...CATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAACGCTCAAATTGTGGTaGCGGCCTGTCTATGAGGGT +
Preference number: 4 (lower is better)
Translates to: WSLLPVGAQFCWSSGTALTLKLW*RPVYEG
Trigger: ACCCTCATAGACAGGCCGGCACCACAATTTGAGCGT...TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGCTCAAATTGTGGTaGCGGCCTGTCTATGAGGGT +
Preference number: 4 (lower is better)
Translates to: SGFWSLLPVGAQFCWSSGTLKLW*RPVYEG
Trigger: ACCCTCATAGACAGGCCGGCACCACAATTTGAGCGT...ACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAGTCTCCCCAGGACCATaGCCCGGTGACATCTCTTTA +
Preference number: 4 (lower is better)
Translates to: LPVGAQFCWSSGTALRLGVSPGP*PGDISL
Trigger: TAAAGAGATGTCACCGGGGCATGGTCCTGGGGAGAC...TCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGAGGTGGAGTCTTTGTGTaGCACAGGCTCCACCTTACG +
Preference number: 4 (lower is better)
Translates to: SLLPVGAQFCWSSGTALRGGVFV*HRLHLT
Trigger: CGTAAGGTGGAGCCTGTGGCACACAAAGACTCCACC...TCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTTCTCACTGCTGCTGCTaGTGCTCTCAGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: PGFLLVKGKGTRCGSPPVSHCCC*CSQKTG
Trigger: CCCTGTCTTCTGAGAGCAGCAGCAGCAGCAGTGAGA...AACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGCACTCTCACTGCTGCTaGTGCTGCTCTCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: SSCSGMLWQSACLRSTALHSHCC*CCSQKT
Trigger: TGTCTTCTGAGAGCAGCAGCAGCAGCAGTGAGAGTG...CAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTATCATCACACTCCTCCTaGTCTTCCCTTATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QASGHCYQSEHSFAGVVVSSHSS*SSLMVP
Trigger: GGGCACCATAAGGGAAGAGCAGGAGGAGTGTGATGA...TACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACATCTCCATTAACTCTGTaGGGGTCTTCCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: WQSACLRSTALWAEGLSTSPLTL*GSSSAS
Trigger: AGAAGCAGAGGAAGACCCGCACAGAGTTAATGGAGA...TGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp GTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACCTCAAGGTATTTTTCTaGTCTGGGGACATCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VAKRMSEKYCTVGRGSLNLKVFF*SGDISA
Trigger: TGCAGAGATGTCCCCAGAGCAGAAAAATACCTTGAG...GTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp CTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTCTTCTGCGTCACCCTTaGCCCGACTCTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LLPVGAQFCWSSGTALRLLLRHP*PDSLLQ
Trigger: CTGAAGAAGAGAGTCGGGCCAAGGGTGACGCAGAAG...AAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCTTCTGCGTCACCCTTaGCCCGACTCTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KLPGFLLVKGKGTRCGSPLLRHP*PDSLLQ
Trigger: CTGAAGAAGAGAGTCGGGCCAAGGGTGACGCAGAAG...AGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGCTAGAAGGGTCACTTTaGCCAGGACAGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: GVVLLLFWNAVAKRMSEKLEGSL*PGQSWS
Trigger: AGACCAAGACTGTCCTGGCCAAAGTGACCCTTCTAG...CTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTACCTGGTCACAACACTTGTCCCTTaGCACGTTTCTCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: CLRSTALWAEGLSTQYLVTTLVP*HVSQGH
Trigger: GTGACCTTGAGAAACGTGCCAAGGGACAAGTGTTGT...GACCAGGTACTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACAAGCTGCCCGGTGGTTTaGCAATTTGAATCCAATGGT +
Preference number: 4 (lower is better)
Translates to: WQSACLRSTALWAEGLSTSCPVV*QFESNG
Trigger: ACCATTGGATTCAAATTGCCAAACCACCGGGCAGCT...TGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGGGGTGTAGCTTTTGTTaGGCTTTTGCTGTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: SSCSGMLWQSACLRSTALGCSFC*AFAVPP
Trigger: CGGAGGGACAGCAAAAGCCCAACAAAAGCTACACCC...CAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAGGGTGTAGCTTTTGTTaGGCTTTTGCTGTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: WSLLPVGAQFCWSSGTALGCSFC*AFAVPP
Trigger: CGGAGGGACAGCAAAAGCCCAACAAAAGCTACACCC...TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACAGAAGACAGGGAGGTaGAGTCTTTGTGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: QASGHCYQSEHSFAGVVVQKTGR*SLCVPQ
Trigger: CTGTGGCACACAAAGACTCCACCTCCCTGTCTTCTG...TACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTACAGAAGACAGGGAGGTaGAGTCTTTGTGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: WSLLPVGAQFCWSSGTALQKTGR*SLCVPQ
Trigger: CTGTGGCACACAAAGACTCCACCTCCCTGTCTTCTG...TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp ATTTTAATTCTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTCCCTGCTTGTCTGTCTaGGACGGCGTCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: ILILQASGHCYQSEHSFAPCLSV*DGVGHC
Trigger: GCAGTGCCCGACGCCGTCCCAGACAGACAAGCAGGG...AGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAGAATTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTGGGGACTTCCTTGGTaGAGATTTCTGTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: QSACLRSTALWAEGLSTQWGLPW*RFLSFV
Trigger: CACAAAGGACAGAAATCTCCACCAAGGAAGTCCCCA...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp GTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACCAATGGGGACTTCCTTaGTGGAGATTTCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: VAKRMSEKYCTVGRGSLNQWGLP*WRFLSF
Trigger: AAAGGACAGAAATCTCCACCAAGGAAGTCCCCATTG...GTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR TCA 90 bp TGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTTTCTTGGTAGCTTTCTaGGAGGCCACCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: WKLPGFLLVKGKGTRCGSFLVAF*EATSAF
Trigger: GAAGGCAGAGGTGGCCTCTCAGAAAGCTACCAAGAA...AGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp ATAACAGCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCGTCTGTCTTTGTAAATaGGAAGGCCATTGGCACACA +
Preference number: 4 (lower is better)
Translates to: ITAPVQVNSALPARLALFVCLCK*EGHWHT
Trigger: TGTGTGCCAATGGCCTTCTCATTTACAAAGACAGAC...GAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGCTGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp AACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAAAGCGTCTGTCTTTGTAAATaGGAAGGCCATTGGCACACA +
Preference number: 4 (lower is better)
Translates to: NQTPDRLSPTSSSQCLQSVCLCK*EGHWHT
Trigger: TGTGTGCCAATGGCCTTCTCATTTACAAAGACAGAC...GCTTTGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp AGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTCACTAATGCTAGCCTaGTGTTTCAGAATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RLEAAWFSLSKREGHTVWSLMLA*CFRMAS
Trigger: GGAGGCCATTCTGAAACATCAGGCTAGCATTAGTGA...CCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS-3UTR TCA 90 bp CCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGAGGACCATGCCCCGGTaGCATCTCTTTACCATTCAT +
Preference number: 4 (lower is better)
Translates to: PVGAQFCWSSGTALRLGMRTMPR*HLFTIH
Trigger: ATGAATGGTAAAGAGATGTCACCGGGGCATGGTCCT...CATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp TGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGGACCATGCCCCGGTaGCATCTCTTTACCATTCAT +
Preference number: 4 (lower is better)
Translates to: WSLLPVGAQFCWSSGTALRTMPR*HLFTIH
Trigger: ATGAATGGTAAAGAGATGTCACCGGGGCATGGTCCT...TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp CCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTACGCGGACTCAGATGTaGTGGTTTGTGCGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: PGFLLVKGKGTRCGSPPVTRTQM*WFVRSV
Trigger: TACTGACCGCACAAACCATCACATCTGAGTCCGCGT...AACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp CTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTACGCGGACTCAGATGTaGTGGTTTGTGCGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: LLPVGAQFCWSSGTALRLTRTQM*WFVRSV
Trigger: TACTGACCGCACAAACCATCACATCTGAGTCCGCGT...AAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR TCA 90 bp GGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGCTTTCACAGTCTTGGTaGTGTGTGTGGTTGTCGTTG +
Preference number: 4 (lower is better)
Translates to: GVVLLLFWNAVAKRMSEKLSQSW*CVWLSL
Trigger: CAACGACAACCACACACATCACCAAGACTGTGAAAG...CTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGAGCTGGGTCTCCACGCTaGTTTTCAAGGCTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SLLPVGAQFCWSSGTALRAGSPR*FSRLVL
Trigger: CAAAACCAGCCTTGAAAAGCAGCGTGGAGACCCAGC...TCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTATGTCTCCCTTTTGGCTaGACCTCCTTCCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: QASGHCYQSEHSFAGVVVCLPFG*TSFQFL
Trigger: GAGAAACTGGAAGGAGGTGCAGCCAAAAGGGAGACA...TACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTTGTCTCCCTTTTGGCTaGACCTCCTTCCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SGFWSLLPVGAQFCWSSGCLPFG*TSFQFL
Trigger: GAGAAACTGGAAGGAGGTGCAGCCAAAAGGGAGACA...ACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp AAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTTTGGTCTTTGGTGGCTaGTCTGGAGACACAAGCCTG +
Preference number: 4 (lower is better)
Translates to: KLPGFLLVKGKGTRCGSPLVFGG*SGDTSL
Trigger: CAGGCTTGTGTCTCCAGAGCAGCCACCAAAGACCAA...AGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp ACACAGTACCTGGTCAGTGAGCTTCTTAATTCTCCAGTCCAGAGAGTCTCTGTCGGTGGAGTCTTTGTGTaGCACAGGCTCCACCTTACG +
Preference number: 4 (lower is better)
Translates to: TQYLVSELLNSPVQRVSVGGVFV*HRLHLT
Trigger: CGTAAGGTGGAGCCTGTGGCACACAAAGACTCCACC...GACAGAGACTCTCTGGACTGGAGAATTAAGAAGCTCACTGACCAGGTACTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTTCATCACACTCCTCCTaGTCTTCCCTTATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LLPVGAQFCWSSGTALRLSSHSS*SSLMVP
Trigger: GGGCACCATAAGGGAAGAGCAGGAGGAGTGTGATGA...AAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTTCATCACACTCCTCCTaGTCTTCCCTTATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: WFSSCSGMLWQSACLRSTSSHSS*SSLMVP
Trigger: GGGCACCATAAGGGAAGAGCAGGAGGAGTGTGATGA...AGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp AACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAAAGCAACTCTGTTTCTTTGTaGACTACCACCCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: NQTPDRLSPTSSSQCLQSNSVSL*TTTLVT
Trigger: GGTCACAAGGGTGGTAGTGCACAAAGAAACAGAGTT...GCTTTGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR GCA 90 bp TGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACAAACTCTGTTTCTTTGTaGACTACCACCCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: WQSACLRSTALWAEGLSTNSVSL*TTTLVT
Trigger: GGTCACAAGGGTGGTAGTGCACAAAGAAACAGAGTT...TGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp GGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTACCCTTTTCTTCCTCTaGCTCAGATACTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: GWKLPGFLLVKGKGTRCGTLFFL*LRYWSL
Trigger: CAGACTCCAGTATCTGAGCCAGAGGAAGAAAAGGGT...ACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTTCAGAGTCCTTGGCATaGTGCAGGTCAACACCGTAC +
Preference number: 4 (lower is better)
Translates to: WKLPGFLLVKGKGTRCGSSESLA*CRSTPY
Trigger: GTACGGTGTTGACCTGCACCATGCCAAGGACTCTGA...AGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTCACCTTCAGAGTCCTTaGCATGGTGCAGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: LLPVGAQFCWSSGTALRLHLQSP*HGAGQH
Trigger: GTGTTGACCTGCACCATGCCAAGGACTCTGAAGGTG...AAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCCAAGAACTTGGTCTTTaGTGGCTGCTCTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVQELGL*WLLWRH
Trigger: GTGTCTCCAGAGCAGCCACCAAAGACCAAGTTCTTG...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGCAAGAACTTGGTCTTTaGTGGCTGCTCTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: SSCSGMLWQSACLRSTALQELGL*WLLWRH
Trigger: GTGTCTCCAGAGCAGCCACCAAAGACCAAGTTCTTG...CAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCCAGGGTCAAGAACTTaGTCTTTGGTGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KLPGFLLVKGKGTRCGSPPGSRT*SLVAAL
Trigger: CAGAGCAGCCACCAAAGACCAAGTTCTTGACCCTGG...AGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTGAACTCGCTTGTGGTTaGAAAGGCAGAGGTGTGACC +
Preference number: 4 (lower is better)
Translates to: WKLPGFLLVKGKGTRCGSELACG*KGRGVT
Trigger: GGTCACACCTCTGCCTTTCCAACCACAAGCGAGTTC...AGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
CDS-3UTR CCA 90 bp CTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTCAGAAGACAGGGAGGTaGAGTCTTTGTGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LLPVGAQFCWSSGTALRLQKTGR*SLCVPQ
Trigger: CTGTGGCACACAAAGACTCCACCTCCCTGTCTTCTG...AAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGGGCCTCTGTTTCTACTaGGAGCACACTGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: FCWSSGTALRLGMVKVLQGLCFY*EHTGPC
Trigger: GCAGGGGCCAGTGTGCTCCCAGTAGAAACAGAGGCC...CTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTGCAACTACATGTTCCTaGGCCTCTGTTTCTACTGGG +
Preference number: 4 (lower is better)
Translates to: SGFWSLLPVGAQFCWSSGATTCS*ASVSTG
Trigger: CCCAGTAGAAACAGAGGCCCAGGAACATGTAGTTGC...ACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGCCCGCCGTCAATCTGTaGAGACTCATATGTGATGGT +
Preference number: 4 (lower is better)
Translates to: LQASGHCYQSEHSFAGVVPAVNL*RLICDG
Trigger: ACCATCACATATGAGTCTCCACAGATTGACGGCGGG...CACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp TGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAATGTCCTGCCTTAGCTaGAGGCACAAGAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: WSLLPVGAQFCWSSGTALMSCLS*RHKKYL
Trigger: CAGATACTTCTTGTGCCTTCAGCTAAGGCAGGACAT...TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp TCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGATGTCCTGCCTTAGCTaGAGGCACAAGAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: SSCSGMLWQSACLRSTALMSCLS*RHKKYL
Trigger: CAGATACTTCTTGTGCCTTCAGCTAAGGCAGGACAT...CAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp CTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGATGTCCTGCCTTAGCTaGAGGCACAAGAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: LQASGHCYQSEHSFAGVVMSCLS*RHKKYL
Trigger: CAGATACTTCTTGTGCCTTCAGCTAAGGCAGGACAT...CACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp TCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTATGTCCTGCCTTAGCTaGAGGCACAAGAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: SGFWSLLPVGAQFCWSSGMSCLS*RHKKYL
Trigger: CAGATACTTCTTGTGCCTTCAGCTAAGGCAGGACAT...ACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp ATAACAGCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCAGTTTTATGCAGTTCTaGCACCTTTTCCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: ITAPVQVNSALPARLALFSFMQF*HLFLQL
Trigger: GAGTTGGAGGAAAAGGTGTCAGAACTGCATAAAACT...GAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGCTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGAGTTTTATGCAGTTCTaGCACCTTTTCCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: QSACLRSTALWAEGLSTQSFMQF*HLFLQL
Trigger: GAGTTGGAGGAAAAGGTGTCAGAACTGCATAAAACT...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp AACCAACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAGCCAAGCAAAACGATTaGTCCTTAGTCTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: NQPNPRPTVPNLFFPVSSAKQND*SLVCLC
Trigger: ACAAAGACAGACTAAGGATCAATCGTTTTGCTTGGC...TGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp GAACAGGGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAATCCAGGGCCAGGCACTaGGCCCTCTCCAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: EQGSRVSRSGYITNNILESRARH*ALSRRA
Trigger: AGCCCTCCTGGAGAGGGCTCAGTGCCTGGCCCTGGA...TTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCCCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCCTTTCACAGTCTTGGTaGTGTGTGTGGTTGTCGTTG +
Preference number: 4 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVLSQSW*CVWLSL
Trigger: CAACGACAACCACACACATCACCAAGACTGTGAAAG...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR TCA 90 bp CCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGCTTTCACAGTCTTGGTaGTGTGTGTGGTTGTCGTTG +
Preference number: 4 (lower is better)
Translates to: PVGAQFCWSSGTALRLGMLSQSW*CVWLSL
Trigger: CAACGACAACCACACACATCACCAAGACTGTGAAAG...CATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR TCA 90 bp TTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAGAGCTGCGTCTCCTGTaGTCACAATGCGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LPVGAQFCWSSGTALRLGELRLL*SQCVSQ
Trigger: TTGAGAAACGCATTGTGATCACAGGAGACGCAGCTC...TCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
ENSMUST00000220290.2
CDS-3UTR GCA 90 bp ATAACAGCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCCTTCTTCACTTCAGATaGAGAGCCAACTTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: ITAPVQVNSALPARLALFLLHFR*RANFSS
Trigger: ACTACTGAAGTTGGCTCTGCATCTGAAGTGAAGAAG...GAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGCTGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp ATGCACATGGCTAGACTCTATATTATAAGGGGGAACATAACAAAAACAGGAGGGTCCGCAGGCGGGGAGTaGTTTGCCTCTCAACCGGAG +
Preference number: 4 (lower is better)
Translates to: MHMARLYIIRGNITKTGGSAGGE*FASQPE
Trigger: CTCCGGTTGAGAGGCAAAGCACTCCCCGCCTGCGGA...CCCTCCTGTTTTTGTTATGTTCCCCCTTATAATATAGAGTCTAGCCATGTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR GCA 90 bp TGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGATTCATTGCTTCTCTGGTCTGTaGCTGCGTGCGGCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: WSSGTALRLGMVKVLQIHCFSGL*LRAAAV
Trigger: TACAGCGGCCGCACGCAGGCACAGACCAGAGAAGCA...ATGAATCTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGGTGCGGGTCTTCCTCTaGTTCTTCTCTCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGVRVFL*FFSRVL
Trigger: CAGGACCCGAGAGAAGAAGCAGAGGAAGACCCGCAC...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGGTGCGGGTCTTCCTCTaGTTCTTCTCTCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FCWSSGTALRLGMVKVLQVRVFL*FFSRVL
Trigger: CAGGACCCGAGAGAAGAAGCAGAGGAAGACCCGCAC...CTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR GCA 90 bp CCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGTCTCCATTAACTCTGTaGGGGTCTTCCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PVGAQFCWSSGTALRLGMSPLTL*GSSSAS
Trigger: AGAAGCAGAGGAAGACCCGCACAGAGTTAATGGAGA...CATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR GCA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCTCTCCATTAACTCTGTaGGGGTCTTCCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVSPLTL*GSSSAS
Trigger: AGAAGCAGAGGAAGACCCGCACAGAGTTAATGGAGA...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR CCA 90 bp AGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGCTCTGGCTCAGATACTaGAGTCTGCTCATTTTCTAC +
Preference number: 4 (lower is better)
Translates to: RLEAAWFSLSKREGHTVWLWLRY*SLLIFY
Trigger: GTAGAAAATGAGCAGACTCCAGTATCTGAGCCAGAG...CCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTGCTGCTTTTCAAGGCTaGTTTTGCTTCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: PGFLLVKGKGTRCGSPPVAAFQG*FCFPDL
Trigger: GAGGTCAGGGAAGCAAAACCAGCCTTGAAAAGCAGC...AACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGACAACACTTGTCCCTTaGCACGTTTCTCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: PVGAQFCWSSGTALRLGMTTLVP*HVSQGH
Trigger: GTGACCTTGAGAAACGTGCCAAGGGACAAGTGTTGT...CATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGAGCTGCCCGGTGGTTTaGCAATTTGAATCCAATGGT +
Preference number: 4 (lower is better)
Translates to: LQASGHCYQSEHSFAGVVSCPVV*QFESNG
Trigger: ACCATTGGATTCAAATTGCCAAACCACCGGGCAGCT...CACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCTTTGGTGGCTGCTCTaGAGACACAAGCCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: KLPGFLLVKGKGTRCGSPLWWLL*RHKPVE
Trigger: TTCTACAGGCTTGTGTCTCCAGAGCAGCCACCAAAG...AGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGTATGGGAATAGTAGAGACCAGAGCTGTTAAGGTATGGTTTGCTGTTGGCATTCTCTCGCTTCCCGTATaGCCTGAGCCAGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: CMGIVETRAVKVWFAVGILSLPV*PEPAPD
Trigger: ATCAGGCGCTGGCTCAGGCCATACGGGAAGCGAGAG...AATGCCAACAGCAAACCATACCTTAACAGCTCTGGTCTCTACTATTCCCATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp TCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTCTCTGTTTTTACCACTaGTGGCTTAACAGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: SGFWSLLPVGAQFCWSSGLCFYH*WLNSVP
Trigger: AGGGACGCTGTTAAGCCACCAGTGGTAAAAACAGAG...ACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS-3UTR TCA 90 bp GGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGAGTTTTATGCAGTTCTaGCACCTTTTCCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: GVVLLLFWNAVAKRMSEKSFMQF*HLFLQL
Trigger: GAGTTGGAGGAAAAGGTGTCAGAACTGCATAAAACT...CTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp CCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTTCACTAATGCTAGCCTaGTGTTTCAGAATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PGFLLVKGKGTRCGSPPVSLMLA*CFRMAS
Trigger: GGAGGCCATTCTGAAACATCAGGCTAGCATTAGTGA...AACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS-3UTR TCA 90 bp ACACAGTACCTGGTCAGTGAGCTTCTTAATTCTCCAGTCCAGAGAGTCTCTGTCGAGCTGCGTCTCCTGTaGTCACAATGCGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: TQYLVSELLNSPVQRVSVELRLL*SQCVSQ
Trigger: TTGAGAAACGCATTGTGATCACAGGAGACGCAGCTC...GACAGAGACTCTCTGGACTGGAGAATTAAGAAGCTCACTGACCAGGTACTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR GCA 90 bp CCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTCACAGCTGTATTCCGTaGCATCTAGAAGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: PGFLLVKGKGTRCGSPPVHSCIP*HLEGSL
Trigger: AAGTGACCCTTCTAGATGGCACGGAATACAGCTGTG...AACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTCACAGCTGTATTCCGTaGCATCTAGAAGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: LLPVGAQFCWSSGTALRLHSCIP*HLEGSL
Trigger: AAGTGACCCTTCTAGATGGCACGGAATACAGCTGTG...AAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGACACAGCTGTATTCCGTaGCATCTAGAAGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: LPVGAQFCWSSGTALRLGHSCIP*HLEGSL
Trigger: AAGTGACCCTTCTAGATGGCACGGAATACAGCTGTG...TCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp AGAAAGAAATCTCTAAGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAATGCTTCTCTGGTCTGTaGCTGCGTGCGGCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: RKKSLRLEAAWFSLSKRECFSGL*LRAAAV
Trigger: TACAGCGGCCGCACGCAGGCACAGACCAGAGAAGCA...TTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCTTAGAGATTTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGCCTCACTCTCACTGCTaGTGCTGCTGCTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: FCWSSGTALRLGMVKVLQPHSHC*CCCSQK
Trigger: CTTCTGAGAGCAGCAGCAGCAGCAGTGAGAGTGAGG...CTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp ATTTTAATTCTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGTCCTGCTCAGCAGTaGCTCCGTGTGCACCCTTTT +
Preference number: 4 (lower is better)
Translates to: ILILQASGHCYQSEHSFAGPAQQ*LRVHPF
Trigger: AAAAGGGTGCACACGGAGGCACTGCTGAGCAGGACC...AGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAGAATTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTAAACTCTGTTTCTTTGTaGACTACCACCCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: QASGHCYQSEHSFAGVVVNSVSL*TTTLVT
Trigger: GGTCACAAGGGTGGTAGTGCACAAAGAAACAGAGTT...TACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp TCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGCTCTGGCTCAGATACTaGAGTCTGCTCATTTTCTAC +
Preference number: 4 (lower is better)
Translates to: SSCSGMLWQSACLRSTALLWLRY*SLLIFY
Trigger: GTAGAAAATGAGCAGACTCCAGTATCTGAGCCAGAG...CAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCCTCTGGCTCAGATACTaGAGTCTGCTCATTTTCTAC +
Preference number: 4 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVLWLRY*SLLIFY
Trigger: GTAGAAAATGAGCAGACTCCAGTATCTGAGCCAGAG...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCTATCTCCTCCATCTTTaGCTACTACTAAATTGTAAG +
Preference number: 4 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLYLLHL*LLLNCK
Trigger: CTTACAATTTAGTAGTAGCCAAAGATGGAGGAGATA...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGCTTCTGCGTCACCCTTaGCCCGACTCTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGLLRHP*PDSLLQ
Trigger: CTGAAGAAGAGAGTCGGGCCAAGGGTGACGCAGAAG...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGTTTCCTCCAACTCCTTaGTGTGGGCCGGGGCAAACT +
Preference number: 4 (lower is better)
Translates to: FCWSSGTALRLGMVKVLQFPPTP*CGPGQT
Trigger: AGTTTGCCCCGGCCCACACCAAGGAGTTGGAGGAAA...CTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGTCAACACCGTACATaGAAAGCCTCTTTGCGTTCT +
Preference number: 4 (lower is better)
Translates to: LLPVGAQFCWSSGTALRLGQHRT*KASLRS
Trigger: AGAACGCAAAGAGGCTTTCCATGTACGGTGTTGACC...AAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp ACACAGTACCTGGTCAGTGAGCTTCTTAATTCTCCAGTCCAGAGAGTCTCTGTCGAACTTGGTCTTTGGTaGCTGCTCTGGAGACACAAG +
Preference number: 4 (lower is better)
Translates to: TQYLVSELLNSPVQRVSVELGLW*LLWRHK
Trigger: CTTGTGTCTCCAGAGCAGCCACCAAAGACCAAGTTC...GACAGAGACTCTCTGGACTGGAGAATTAAGAAGCTCACTGACCAGGTACTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp ACACAGTACCTGGTCAGTGAGCTTCTTAATTCTCCAGTCCAGAGAGTCTCTGTCCAAGAACTTGGTCTTTaGTGGCTGCTCTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: TQYLVSELLNSPVQRVSVQELGL*WLLWRH
Trigger: GTGTCTCCAGAGCAGCCACCAAAGACCAAGTTCTTG...GACAGAGACTCTCTGGACTGGAGAATTAAGAAGCTCACTGACCAGGTACTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AGAAAGAAATCTCTAAGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGCTTCTCCCATTCACTaGGGCGAGGCTCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RKKSLRLEAAWFSLSKREASPIH*GEAQVW
Trigger: CCACACCTGAGCCTCGCCCCAGTGAATGGGAGAAGC...TTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCTTAGAGATTTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp CCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGCAATGGGGACTTCCTTaGTGGAGATTTCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: PVGAQFCWSSGTALRLGMQWGLP*WRFLSF
Trigger: AAAGGACAGAAATCTCCACCAAGGAAGTCCCCATTG...CATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp CTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGCAATGGGGACTTCCTTaGTGGAGATTTCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: LQASGHCYQSEHSFAGVVQWGLP*WRFLSF
Trigger: AAAGGACAGAAATCTCCACCAAGGAAGTCCCCATTG...CACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp AGAAAGAAATCTCTAAGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAACTCTCGCTTCCCGTATaGCCTGAGCCAGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: RKKSLRLEAAWFSLSKRELSLPV*PEPAPD
Trigger: ATCAGGCGCTGGCTCAGGCCATACGGGAAGCGAGAG...TTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCTTAGAGATTTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp GGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTACCTTTCACAGTCTGTaGAGACTCATATGTGATGGT +
Preference number: 4 (lower is better)
Translates to: GWKLPGFLLVKGKGTRCGTFHSL*RLICDG
Trigger: ACCATCACATATGAGTCTCCACAGACTGTGAAAGGT...ACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS-3UTR TCA 90 bp TTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGTCCAGGTGCTTCCTCTaGGCCATTTCTTCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: FCWSSGTALRLGMVKVLQSRCFL*AISSAS
Trigger: TGACGCAGAAGAAATGGCTCAGAGGAAGCACCTGGA...CTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp TGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGTTTTATGCAGTTCTaGCACCTTTTCCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: WSLLPVGAQFCWSSGTALSFMQF*HLFLQL
Trigger: GAGTTGGAGGAAAAGGTGTCAGAACTGCATAAAACT...TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp TTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGGCGTTCTCTAAGAACTaGGAGTCGGCTTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: FCWSSGTALRLGMVKVLQAFSKN*ESACAG
Trigger: TCCAGCACAAGCCGACTCTCAGTTCTTAGAGAACGC...CTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGCACACACACCCAGCTTaGTGTCCACACCTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGHTHPA*CPHLQS
Trigger: ACTCTGAAGGTGTGGACATCAAGCTGGGTGTGTGTG...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCGCCAAGCAAAACGATTaGTCCTTAGTCTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVAKQND*SLVCLC
Trigger: ACAAAGACAGACTAAGGATCAATCGTTTTGCTTGGC...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp TGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAGCCAAGCAAAACGATTaGTCCTTAGTCTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: WSLLPVGAQFCWSSGTALAKQND*SLVCLC
Trigger: ACAAAGACAGACTAAGGATCAATCGTTTTGCTTGGC...TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp TCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGGGTGGTTTGGCAATTTaGATCCAATGGTACTCTCAA +
Preference number: 4 (lower is better)
Translates to: SSCSGMLWQSACLRSTALGGLAI*IQWYSQ
Trigger: TTGAGAGTACCATTGGATTCAAATTGCCAAACCACC...CAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp CAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTAGTGGAGACTCATATGTaGTGGTTTTGGTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: QASGHCYQSEHSFAGVVVVETHM*WFWSQF
Trigger: AAACTGAGACCAAAACCATCACATATGAGTCTCCAC...TACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR TCA 90 bp TCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGGTGGAGACTCATATGTaGTGGTTTTGGTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SSCSGMLWQSACLRSTALVETHM*WFWSQF
Trigger: AAACTGAGACCAAAACCATCACATATGAGTCTCCAC...CAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR GCA 90 bp TGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTACTTCTTCACTTCAGATaGAGAGCCAACTTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: WSLLPVGAQFCWSSGTALLLHFR*RANFSS
Trigger: ACTACTGAAGTTGGCTCTGCATCTGAAGTGAAGAAG...TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp CTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGCTTCTTCACTTCAGATaGAGAGCCAACTTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: LQASGHCYQSEHSFAGVVLLHFR*RANFSS
Trigger: ACTACTGAAGTTGGCTCTGCATCTGAAGTGAAGAAG...CACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp AGAAAGAAATCTCTAAGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGTCCTGCTCAGCAGTaGCTCCGTGTGCACCCTTTT +
Preference number: 4 (lower is better)
Translates to: RKKSLRLEAAWFSLSKREGPAQQ*LRVHPF
Trigger: AAAAGGGTGCACACGGAGGCACTGCTGAGCAGGACC...TTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCTTAGAGATTTCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGAAACTCTGTTTCTTTGTaGACTACCACCCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: SLLPVGAQFCWSSGTALRNSVSL*TTTLVT
Trigger: GGTCACAAGGGTGGTAGTGCACAAAGAAACAGAGTT...TCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp ACACAGTACCTGGTCAGTGAGCTTCTTAATTCTCCAGTCCAGAGAGTCTCTGTCGGTCAACACCGTACATaGAAAGCCTCTTTGCGTTCT +
Preference number: 4 (lower is better)
Translates to: TQYLVSELLNSPVQRVSVGQHRT*KASLRS
Trigger: AGAACGCAAAGAGGCTTTCCATGTACGGTGTTGACC...GACAGAGACTCTCTGGACTGGAGAATTAAGAAGCTCACTGACCAGGTACTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GAACAGGGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAACTCGGTGGTGGGGCTaGTACTCTCCCACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: EQGSRVSRSGYITNNILETRWWG*YSPTSS
Trigger: GGAGGACGTGGGAGAGTACCAGCCCCACCACCGAGT...TTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCCCTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp ACACAGTACCTGGTCAGTGAGCTTCTTAATTCTCCAGTCCAGAGAGTCTCTGTCTGGGGACTTCCTTGGTaGAGATTTCTGTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: TQYLVSELLNSPVQRVSVWGLPW*RFLSFV
Trigger: CACAAAGGACAGAAATCTCCACCAAGGAAGTCCCCA...GACAGAGACTCTCTGGACTGGAGAATTAAGAAGCTCACTGACCAGGTACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp GATGGGAAGGGCAACCTCATGTTTAGTCTAATATCTCAAAGCCATGGTTCATTTAAGAAACCCAGAGCTTaGGGAGGCTGGGGAACGCCA +
Preference number: 4 (lower is better)
Translates to: DGKGNLMFSLISQSHGSFKKPRA*GGWGTP
Trigger: TGGCGTTCCCCAGCCTCCCCAAGCTCTGGGTTTCTT...AAATGAACCATGGCTTTGAGATATTAGACTAAACATGAGGTTGCCCTTCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp TGTATGGGAATAGTAGAGACCAGAGCTGTTAAGGTATGGTTTGCTGTTGGCATTGCGTTCTCTAAGAACTaGGAGTCGGCTTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: CMGIVETRAVKVWFAVGIAFSKN*ESACAG
Trigger: TCCAGCACAAGCCGACTCTCAGTTCTTAGAGAACGC...AATGCCAACAGCAAACCATACCTTAACAGCTCTGGTCTCTACTATTCCCATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp ATTTTAATTCTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTCACACACACCCAGCTTaGTGTCCACACCTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: ILILQASGHCYQSEHSFAHTHPA*CPHLQS
Trigger: ACTCTGAAGGTGTGGACATCAAGCTGGGTGTGTGTG...AGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAGAATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp CCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTGGTGGTTTGGCAATTTaGATCCAATGGTACTCTCAA +
Preference number: 4 (lower is better)
Translates to: PGFLLVKGKGTRCGSPPVGGLAI*IQWYSQ
Trigger: TTGAGAGTACCATTGGATTCAAATTGCCAAACCACC...AACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp TTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAGTGGAGACTCATATGTaGTGGTTTTGGTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LPVGAQFCWSSGTALRLGVETHM*WFWSQF
Trigger: AAACTGAGACCAAAACCATCACATATGAGTCTCCAC...TCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR TCA 90 bp TTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGTGTGGTTGTCGTTGTTaGCGCGGACTCAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: FCWSSGTALRLGMVKVLQCGCRC*RGLRCD
Trigger: ATCACATCTGAGTCCGCGTCAACAACGACAACCACA...CTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR TCA 90 bp GATGGGAAGGGCAACCTCATGTTTAGTCTAATATCTCAAAGCCATGGTTCATTTCTATCGAGTGTGGTCTaGTCAGCCTCCCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: DGKGNLMFSLISQSHGSFLSSVV*SASPKG
Trigger: CCCTTTTGGGGAGGCTGATCAGACCACACTCGATAG...AAATGAACCATGGCTTTGAGATATTAGACTAAACATGAGGTTGCCCTTCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR GCA 90 bp AACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAAAGCTCAGATACTGGAGTCTaGTCATTTTCTACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: NQTPDRLSPTSSSQCLQSSDTGV*SFSTSL
Trigger: TAAAGAAGTAGAAAATGAGCAGACTCCAGTATCTGA...GCTTTGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGTTTCAAGGCTGGTTTTaGTTCCCTGACCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGFQGWF*FPDLHL
Trigger: CAGGTGGAGGTCAGGGAAGCAAAACCAGCCTTGAAA...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp ATTTTAATTCTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGCTGGGTCTCCACGCTaGTTTTCAAGGCTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: ILILQASGHCYQSEHSFAAGSPR*FSRLVL
Trigger: CAAAACCAGCCTTGAAAAGCAGCGTGGAGACCCAGC...AGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAGAATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp ATTTTAATTCTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTACGCTCAAATTGTGGTaGCGGCCTGTCTATGAGGGT +
Preference number: 4 (lower is better)
Translates to: ILILQASGHCYQSEHSFATLKLW*RPVYEG
Trigger: ACCCTCATAGACAGGCCGGCACCACAATTTGAGCGT...AGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAGAATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TGTATGGGAATAGTAGAGACCAGAGCTGTTAAGGTATGGTTTGCTGTTGGCATTCACTCTCACTGCTGCTaGTGCTGCTCTCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: CMGIVETRAVKVWFAVGIHSHCC*CCSQKT
Trigger: TGTCTTCTGAGAGCAGCAGCAGCAGCAGTGAGAGTG...AATGCCAACAGCAAACCATACCTTAACAGCTCTGGTCTCTACTATTCCCATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp GGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGATTCATGAAGTTAAAGCTCTTCCCTTATGGTaGCCTCGGTCACTCGGTGGT +
Preference number: 4 (lower is better)
Translates to: GTALRLGMVKVLQIHEVKALPLW*PRSLGG
Trigger: ACCACCGAGTGACCGAGGGCACCATAAGGGAAGAGC...TTTAACTTCATGAATCTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp ACACAGTACCTGGTCAGTGAGCTTCTTAATTCTCCAGTCCAGAGAGTCTCTGTCAACTCTGTTTCTTTGTaGACTACCACCCTTGTGACC +
Preference number: 4 (lower is better)
Translates to: TQYLVSELLNSPVQRVSVNSVSL*TTTLVT
Trigger: GGTCACAAGGGTGGTAGTGCACAAAGAAACAGAGTT...GACAGAGACTCTCTGGACTGGAGAATTAAGAAGCTCACTGACCAGGTACTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp AGAAAGAAATCTCTAAGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGCATCTGCTCCAGCCTaGTCAGAGCCCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: RKKSLRLEAAWFSLSKREASAPA*SEPFFT
Trigger: AGTGAAGAAGGGCTCTGACCAGGCTGGAGCAGATGC...TTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCTTAGAGATTTCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GATGGGAAGGGCAACCTCATGTTTAGTCTAATATCTCAAAGCCATGGTTCATTTGCATCTGCTCCAGCCTaGTCAGAGCCCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: DGKGNLMFSLISQSHGSFASAPA*SEPFFT
Trigger: AGTGAAGAAGGGCTCTGACCAGGCTGGAGCAGATGC...AAATGAACCATGGCTTTGAGATATTAGACTAAACATGAGGTTGCCCTTCCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGCTAGAAGGGTCACTTTaGCCAGGACAGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGLEGSL*PGQSWS
Trigger: AGACCAAGACTGTCCTGGCCAAAGTGACCCTTCTAG...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp ATTTTAATTCTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTCACCTTCAGAGTCCTTaGCATGGTGCAGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: ILILQASGHCYQSEHSFAHLQSP*HGAGQH
Trigger: GTGTTGACCTGCACCATGCCAAGGACTCTGAAGGTG...AGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAGAATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCCTGTTCCAGCTCTGCTaGTCTAACTTTAATGTAGAA +
Preference number: 4 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVLFQLC*SNFNVE
Trigger: TTCTACATTAAAGTTAGACCAGCAGAGCTGGAACAG...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGCTGTTCCAGCTCTGCTaGTCTAACTTTAATGTAGAA +
Preference number: 4 (lower is better)
Translates to: LQASGHCYQSEHSFAGVVLFQLC*SNFNVE
Trigger: TTCTACATTAAAGTTAGACCAGCAGAGCTGGAACAG...CACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGCCTGATGTTTCAGAATaGCCTCCTGGGCCTTATCCA +
Preference number: 4 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGPDVSE*PPGPYP
Trigger: TGGATAAGGCCCAGGAGGCCATTCTGAAACATCAGG...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp ATTTTAATTCTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTCAGAAGACAGGGAGGTaGAGTCTTTGTGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: ILILQASGHCYQSEHSFAQKTGR*SLCVPQ
Trigger: CTGTGGCACACAAAGACTCCACCTCCCTGTCTTCTG...AGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAGAATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp ATGCACATGGCTAGACTCTATATTATAAGGGGGAACATAACAAAAACAGGAGGGTTCTTGGTAGCTTTCTaGGAGGCCACCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: MHMARLYIIRGNITKTGGFLVAF*EATSAF
Trigger: GAAGGCAGAGGTGGCCTCTCAGAAAGCTACCAAGAA...CCCTCCTGTTTTTGTTATGTTCCCCCTTATAATATAGAGTCTAGCCATGTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp ATGCACATGGCTAGACTCTATATTATAAGGGGGAACATAACAAAAACAGGAGGGCACACACACCCAGCTTaGTGTCCACACCTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: MHMARLYIIRGNITKTGGHTHPA*CPHLQS
Trigger: ACTCTGAAGGTGTGGACATCAAGCTGGGTGTGTGTG...CCCTCCTGTTTTTGTTATGTTCCCCCTTATAATATAGAGTCTAGCCATGTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp TGTATGGGAATAGTAGAGACCAGAGCTGTTAAGGTATGGTTTGCTGTTGGCATTTGTGGTTGTCGTTGTTaGCGCGGACTCAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: CMGIVETRAVKVWFAVGICGCRC*RGLRCD
Trigger: ATCACATCTGAGTCCGCGTCAACAACGACAACCACA...AATGCCAACAGCAAACCATACCTTAACAGCTCTGGTCTCTACTATTCCCATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp GATGGGAAGGGCAACCTCATGTTTAGTCTAATATCTCAAAGCCATGGTTCATTTGCTGGGTCTCCACGCTaGTTTTCAAGGCTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: DGKGNLMFSLISQSHGSFAGSPR*FSRLVL
Trigger: CAAAACCAGCCTTGAAAAGCAGCGTGGAGACCCAGC...AAATGAACCATGGCTTTGAGATATTAGACTAAACATGAGGTTGCCCTTCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR GCA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGCACAGCTGTATTCCGTaGCATCTAGAAGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGHSCIP*HLEGSL
Trigger: AAGTGACCCTTCTAGATGGCACGGAATACAGCTGTG...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp ATGCACATGGCTAGACTCTATATTATAAGGGGGAACATAACAAAAACAGGAGGGTTGGTCTTTGGTGGCTaGTCTGGAGACACAAGCCTG +
Preference number: 4 (lower is better)
Translates to: MHMARLYIIRGNITKTGGLVFGG*SGDTSL
Trigger: CAGGCTTGTGTCTCCAGAGCAGCCACCAAAGACCAA...CCCTCCTGTTTTTGTTATGTTCCCCCTTATAATATAGAGTCTAGCCATGTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR GCA 90 bp TGTTCTCCTGACACGTGTCAATTACAATTATGCCCAAAACATTCTAAGTTTTGTTGCTTCTCTGGTCTGTaGCTGCGTGCGGCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: CSPDTCQLQLCPKHSKFCCFSGL*LRAAAV
Trigger: TACAGCGGCCGCACGCAGGCACAGACCAGAGAAGCA...ACAAAACTTAGAATGTTTTGGGCATAATTGTAATTGACACGTGTCAGGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR GCA 90 bp GGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGATTCATGAAGTTAAAGTCTCCCCAGGACCATaGCCCGGTGACATCTCTTTA +
Preference number: 4 (lower is better)
Translates to: GTALRLGMVKVLQIHEVKVSPGP*PGDISL
Trigger: TAAAGAGATGTCACCGGGGCATGGTCCTGGGGAGAC...TTTAACTTCATGAATCTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGTCTCCATTAACTCTGTaGGGGTCTTCCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGSPLTL*GSSSAS
Trigger: AGAAGCAGAGGAAGACCCGCACAGAGTTAATGGAGA...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTATCTCCTCCATCTTTaGCTACTACTAAATTGTAAG +
Preference number: 4 (lower is better)
Translates to: GVVLLLFWNAVAKRMSEKYLLHL*LLLNCK
Trigger: CTTACAATTTAGTAGTAGCCAAAGATGGAGGAGATA...CTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGATTCATCTAGAAGGGTCACTTTaGCCAGGACAGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: WSSGTALRLGMVKVLQIHLEGSL*PGQSWS
Trigger: AGACCAAGACTGTCCTGGCCAAAGTGACCCTTCTAG...ATGAATCTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp CTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTCTGTTCCAGCTCTGCTaGTCTAACTTTAATGTAGAA +
Preference number: 4 (lower is better)
Translates to: LLPVGAQFCWSSGTALRLLFQLC*SNFNVE
Trigger: TTCTACATTAAAGTTAGACCAGCAGAGCTGGAACAG...AAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGAGCTGCCCGGTGGTTTaGCAATTTGAATCCAATGGT +
Preference number: 4 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGSCPVV*QFESNG
Trigger: ACCATTGGATTCAAATTGCCAAACCACCGGGCAGCT...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp ATTTTAATTCTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTCTTTGGTGGCTGCTCTaGAGACACAAGCCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: ILILQASGHCYQSEHSFALWWLL*RHKPVE
Trigger: TTCTACAGGCTTGTGTCTCCAGAGCAGCCACCAAAG...AGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAGAATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GATGGGAAGGGCAACCTCATGTTTAGTCTAATATCTCAAAGCCATGGTTCATTTCCAGGGTCAAGAACTTaGTCTTTGGTGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: DGKGNLMFSLISQSHGSFPGSRT*SLVAAL
Trigger: CAGAGCAGCCACCAAAGACCAAGTTCTTGACCCTGG...AAATGAACCATGGCTTTGAGATATTAGACTAAACATGAGGTTGCCCTTCCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp ATGCACATGGCTAGACTCTATATTATAAGGGGGAACATAACAAAAACAGGAGGGGGGTGTAGCTTTTGTTaGGCTTTTGCTGTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: MHMARLYIIRGNITKTGGGCSFC*AFAVPP
Trigger: CGGAGGGACAGCAAAAGCCCAACAAAAGCTACACCC...CCCTCCTGTTTTTGTTATGTTCCCCCTTATAATATAGAGTCTAGCCATGTGCAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp GGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAGTGTATGCTTCTCCCATTCACTaGGGCGAGGCTCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GSRVSRSGYITNNILEVYASPIH*GEAQVW
Trigger: CCACACCTGAGCCTCGCCCCAGTGAATGGGAGAAGC...ATACACTTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp CAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTAACAACAAATAATCTCTaGCAAACCATCAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: QASGHCYQSEHSFAGVVVTTNNL*QTIKVK
Trigger: CTTGACCTTGATGGTTTGCCAGAGATTATTTGTTGT...TACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR CCA 90 bp ATTTTAATTCTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTCCCGCCGTCAATCTGTaGAGACTCATATGTGATGGT +
Preference number: 4 (lower is better)
Translates to: ILILQASGHCYQSEHSFAPAVNL*RLICDG
Trigger: ACCATCACATATGAGTCTCCACAGATTGACGGCGGG...AGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAGAATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAGTGTATCTCTCGCTTCCCGTATaGCCTGAGCCAGCGCCTGAT +
Preference number: 4 (lower is better)
Translates to: GSRVSRSGYITNNILEVYLSLPV*PEPAPD
Trigger: ATCAGGCGCTGGCTCAGGCCATACGGGAAGCGAGAG...ATACACTTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp GATGGGAAGGGCAACCTCATGTTTAGTCTAATATCTCAAAGCCATGGTTCATTTCGAAGCTATCGAGTGTaGTCTGATCAGCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: DGKGNLMFSLISQSHGSFRSYRV*SDQPPQ
Trigger: TTGGGGAGGCTGATCAGACCACACTCGATAGCTTCG...AAATGAACCATGGCTTTGAGATATTAGACTAAACATGAGGTTGCCCTTCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp AGTGTAATTTACATACAGACTTGGGCTCATAAGTGCAAGTGCAATATTGAGTTTAGAGCTTGGGGAGGCTaGGGAACGCCAGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: SVIYIQTWAHKCKCNIEFRAWGG*GTPGSH
Trigger: ATGGCTACCTGGCGTTCCCCAGCCTCCCCAAGCTCT...AAACTCAATATTGCACTTGCACTTATGAGCCCAAGTCTGTATGTAAATTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp GGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGATTCATGAAGTTAAAGCGTTCTCTAAGAACTaGGAGTCGGCTTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GTALRLGMVKVLQIHEVKAFSKN*ESACAG
Trigger: TCCAGCACAAGCCGACTCTCAGTTCTTAGAGAACGC...TTTAACTTCATGAATCTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp TTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGGTCTGTCTTTGTAAATaGGAAGGCCATTGGCACACA +
Preference number: 4 (lower is better)
Translates to: FCWSSGTALRLGMVKVLQVCLCK*EGHWHT
Trigger: TGTGTGCCAATGGCCTTCTCATTTACAAAGACAGAC...CTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp GGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAGTGTATGTGCCGGCCTGTCTATaGGGGTACTTGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GSRVSRSGYITNNILEVYVPACL*GYLLLW
Trigger: CCAGAGAAGCAAGTACCCTCATAGACAGGCCGGCAC...ATACACTTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp AGTGTAATTTACATACAGACTTGGGCTCATAAGTGCAAGTGCAATATTGAGTTTGTGCCGGCCTGTCTATaGGGGTACTTGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SVIYIQTWAHKCKCNIEFVPACL*GYLLLW
Trigger: CCAGAGAAGCAAGTACCCTCATAGACAGGCCGGCAC...AAACTCAATATTGCACTTGCACTTATGAGCCCAAGTCTGTATGTAAATTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp ATTTTAATTCTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTTCACTAATGCTAGCCTaGTGTTTCAGAATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ILILQASGHCYQSEHSFASLMLA*CFRMAS
Trigger: GGAGGCCATTCTGAAACATCAGGCTAGCATTAGTGA...AGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAGAATTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS-3UTR TCA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGATTCAGAGTCTCATGTaGACTCGCTTGTGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGIQSLM*TRLWLE
Trigger: TTCCAACCACAAGCGAGTTCACATGAGACTCTGAAT...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
CDS-3UTR GCA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCTCAGATACTGGAGTCTaGTCATTTTCTACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVSDTGV*SFSTSL
Trigger: TAAAGAAGTAGAAAATGAGCAGACTCCAGTATCTGA...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp AGAAAGAAATCTCTAAGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAATGTCTCCCTTTTGGCTaGACCTCCTTCCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: RKKSLRLEAAWFSLSKRECLPFG*TSFQFL
Trigger: GAGAAACTGGAAGGAGGTGCAGCCAAAAGGGAGACA...TTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCTTAGAGATTTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGATTCATACCCTTTTCTTCCTCTaGCTCAGATACTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: WSSGTALRLGMVKVLQIHTLFFL*LRYWSL
Trigger: CAGACTCCAGTATCTGAGCCAGAGGAAGAAAAGGGT...ATGAATCTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGTATGGGAATAGTAGAGACCAGAGCTGTTAAGGTATGGTTTGCTGTTGGCATTACCCTTTTCTTCCTCTaGCTCAGATACTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: CMGIVETRAVKVWFAVGITLFFL*LRYWSL
Trigger: CAGACTCCAGTATCTGAGCCAGAGGAAGAAAAGGGT...AATGCCAACAGCAAACCATACCTTAACAGCTCTGGTCTCTACTATTCCCATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AGAAAGAAATCTCTAAGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGCTGCTTTTCAAGGCTaGTTTTGCTTCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: RKKSLRLEAAWFSLSKREAAFQG*FCFPDL
Trigger: GAGGTCAGGGAAGCAAAACCAGCCTTGAAAAGCAGC...TTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCTTAGAGATTTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GATGGGAAGGGCAACCTCATGTTTAGTCTAATATCTCAAAGCCATGGTTCATTTGCTGCTTTTCAAGGCTaGTTTTGCTTCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: DGKGNLMFSLISQSHGSFAAFQG*FCFPDL
Trigger: GAGGTCAGGGAAGCAAAACCAGCCTTGAAAAGCAGC...AAATGAACCATGGCTTTGAGATATTAGACTAAACATGAGGTTGCCCTTCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp TGTATGGGAATAGTAGAGACCAGAGCTGTTAAGGTATGGTTTGCTGTTGGCATTACAACACTTGTCCCTTaGCACGTTTCTCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: CMGIVETRAVKVWFAVGITTLVP*HVSQGH
Trigger: GTGACCTTGAGAAACGTGCCAAGGGACAAGTGTTGT...AATGCCAACAGCAAACCATACCTTAACAGCTCTGGTCTCTACTATTCCCATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGATTCATGGTCAACACCGTACATaGAAAGCCTCTTTGCGTTCT +
Preference number: 4 (lower is better)
Translates to: WSSGTALRLGMVKVLQIHGQHRT*KASLRS
Trigger: AGAACGCAAAGAGGCTTTCCATGTACGGTGTTGACC...ATGAATCTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGTATGGGAATAGTAGAGACCAGAGCTGTTAAGGTATGGTTTGCTGTTGGCATTAGCTGCCCGGTGGTTTaGCAATTTGAATCCAATGGT +
Preference number: 4 (lower is better)
Translates to: CMGIVETRAVKVWFAVGISCPVV*QFESNG
Trigger: ACCATTGGATTCAAATTGCCAAACCACCGGGCAGCT...AATGCCAACAGCAAACCATACCTTAACAGCTCTGGTCTCTACTATTCCCATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp ATGCACATGGCTAGACTCTATATTATAAGGGGGAACATAACAAAAACAGGAGGGGAACTTGGTCTTTGGTaGCTGCTCTGGAGACACAAG +
Preference number: 4 (lower is better)
Translates to: MHMARLYIIRGNITKTGGELGLW*LLWRHK
Trigger: CTTGTGTCTCCAGAGCAGCCACCAAAGACCAAGTTC...CCCTCCTGTTTTTGTTATGTTCCCCCTTATAATATAGAGTCTAGCCATGTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp ATGCACATGGCTAGACTCTATATTATAAGGGGGAACATAACAAAAACAGGAGGGCAAGAACTTGGTCTTTaGTGGCTGCTCTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: MHMARLYIIRGNITKTGGQELGL*WLLWRH
Trigger: GTGTCTCCAGAGCAGCCACCAAAGACCAAGTTCTTG...CCCTCCTGTTTTTGTTATGTTCCCCCTTATAATATAGAGTCTAGCCATGTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp TGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTACAACAAATAATCTCTaGCAAACCATCAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: WKLPGFLLVKGKGTRCGSTTNNL*QTIKVK
Trigger: CTTGACCTTGATGGTTTGCCAGAGATTATTTGTTGT...AGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp AGAAAGAAATCTCTAAGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGAGATAAGCCCCTGTaGGTTTTATGCAGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: RKKSLRLEAAWFSLSKREGDKPL*VLCSSD
Trigger: GTCAGAACTGCATAAAACTCACAGGGGCTTATCTCC...TTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCTTAGAGATTTCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp ATGCACATGGCTAGACTCTATATTATAAGGGGGAACATAACAAAAACAGGAGGGGGAGATAAGCCCCTGTaGGTTTTATGCAGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: MHMARLYIIRGNITKTGGGDKPL*VLCSSD
Trigger: GTCAGAACTGCATAAAACTCACAGGGGCTTATCTCC...CCCTCCTGTTTTTGTTATGTTCCCCCTTATAATATAGAGTCTAGCCATGTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp TGTATGGGAATAGTAGAGACCAGAGCTGTTAAGGTATGGTTTGCTGTTGGCATTGTCTGTCTTTGTAAATaGGAAGGCCATTGGCACACA +
Preference number: 4 (lower is better)
Translates to: CMGIVETRAVKVWFAVGIVCLCK*EGHWHT
Trigger: TGTGTGCCAATGGCCTTCTCATTTACAAAGACAGAC...AATGCCAACAGCAAACCATACCTTAACAGCTCTGGTCTCTACTATTCCCATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp AAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTTCAGATACTGGAGTCTaGTCATTTTCTACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: KLPGFLLVKGKGTRCGSPSDTGV*SFSTSL
Trigger: TAAAGAAGTAGAAAATGAGCAGACTCCAGTATCTGA...AGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TGTTCTCCTGACACGTGTCAATTACAATTATGCCCAAAACATTCTAAGTTTTGTCTGAGCCATTTCTTCTaGGTCACCCTTGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: CSPDTCQLQLCPKHSKFCLSHFF*VTLGPT
Trigger: AGTCGGGCCAAGGGTGACGCAGAAGAAATGGCTCAG...ACAAAACTTAGAATGTTTTGGGCATAATTGTAATTGACACGTGTCAGGAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR GCA 90 bp ATGCACATGGCTAGACTCTATATTATAAGGGGGAACATAACAAAAACAGGAGGGCACAGCTGTATTCCGTaGCATCTAGAAGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: MHMARLYIIRGNITKTGGHSCIP*HLEGSL
Trigger: AAGTGACCCTTCTAGATGGCACGGAATACAGCTGTG...CCCTCCTGTTTTTGTTATGTTCCCCCTTATAATATAGAGTCTAGCCATGTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR GCA 90 bp GAACAGGGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAACGCTCAAATTGTGGTaGCGGCCTGTCTATGAGGGT +
Preference number: 4 (lower is better)
Translates to: EQGSRVSRSGYITNNILETLKLW*RPVYEG
Trigger: ACCCTCATAGACAGGCCGGCACCACAATTTGAGCGT...TTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCCCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp TGTTCTCCTGACACGTGTCAATTACAATTATGCCCAAAACATTCTAAGTTTTGTGTGACAGGGGGCACATaGAAGTGGTCTTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: CSPDTCQLQLCPKHSKFCVTGGT*KWSFPQ
Trigger: CTGAGGGAAAGACCACTTGCATGTGCCCCCTGTCAC...ACAAAACTTAGAATGTTTTGGGCATAATTGTAATTGACACGTGTCAGGAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp AGTGTAATTTACATACAGACTTGGGCTCATAAGTGCAAGTGCAATATTGAGTTTCTTCTGCGTCACCCTTaGCCCGACTCTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SVIYIQTWAHKCKCNIEFLLRHP*PDSLLQ
Trigger: CTGAAGAAGAGAGTCGGGCCAAGGGTGACGCAGAAG...AAACTCAATATTGCACTTGCACTTATGAGCCCAAGTCTGTATGTAAATTACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp ATGATCTTACCAGTTTGCACTGAATTTAGAATGTGTATAGACCTGGACTTCAAATTTCCTCCAACTCCTTaGTGTGGGCCGGGGCAAACT +
Preference number: 4 (lower is better)
Translates to: MILPVCTEFRMCIDLDFKFPPTP*CGPGQT
Trigger: AGTTTGCCCCGGCCCACACCAAGGAGTTGGAGGAAA...TTTGAAGTCCAGGTCTATACACATTCTAAATTCAGTGCAAACTGGTAAGATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp AGAAAGAAATCTCTAAGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGTCAACACCGTACATaGAAAGCCTCTTTGCGTTCT +
Preference number: 4 (lower is better)
Translates to: RKKSLRLEAAWFSLSKREGQHRT*KASLRS
Trigger: AGAACGCAAAGAGGCTTTCCATGTACGGTGTTGACC...TTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCTTAGAGATTTCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp ATGCACATGGCTAGACTCTATATTATAAGGGGGAACATAACAAAAACAGGAGGGAGCTGCCCGGTGGTTTaGCAATTTGAATCCAATGGT +
Preference number: 4 (lower is better)
Translates to: MHMARLYIIRGNITKTGGSCPVV*QFESNG
Trigger: ACCATTGGATTCAAATTGCCAAACCACCGGGCAGCT...CCCTCCTGTTTTTGTTATGTTCCCCCTTATAATATAGAGTCTAGCCATGTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp GGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAGTGTATCGAGTCGCTTGTGGTTaGAAAGGCAGAGGTGTGACC +
Preference number: 4 (lower is better)
Translates to: GSRVSRSGYITNNILEVYRVACG*KGRGVT
Trigger: GGTCACACCTCTGCCTTTCCAACCACAAGCGACTCG...ATACACTTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp GAACAGGGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAAGGACGAGTCGCTTGTaGTTGGAAAGGCAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: EQGSRVSRSGYITNNILERTSRL*LERQRC
Trigger: ACACCTCTGCCTTTCCAACCACAAGCGACTCGTCCT...TTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCCCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS-3UTR TCA 90 bp ATGATCTTACCAGTTTGCACTGAATTTAGAATGTGTATAGACCTGGACTTCAAATCCAGGTGCTTCCTCTaGGCCATTTCTTCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: MILPVCTEFRMCIDLDFKSRCFL*AISSAS
Trigger: TGACGCAGAAGAAATGGCTCAGAGGAAGCACCTGGA...TTTGAAGTCCAGGTCTATACACATTCTAAATTCAGTGCAAACTGGTAAGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp ATGATCTTACCAGTTTGCACTGAATTTAGAATGTGTATAGACCTGGACTTCAAAGCGTTCTCTAAGAACTaGGAGTCGGCTTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: MILPVCTEFRMCIDLDFKAFSKN*ESACAG
Trigger: TCCAGCACAAGCCGACTCTCAGTTCTTAGAGAACGC...TTTGAAGTCCAGGTCTATACACATTCTAAATTCAGTGCAAACTGGTAAGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp GATGGGAAGGGCAACCTCATGTTTAGTCTAATATCTCAAAGCCATGGTTCATTTGTCTGTCTTTGTAAATaGGAAGGCCATTGGCACACA +
Preference number: 4 (lower is better)
Translates to: DGKGNLMFSLISQSHGSFVCLCK*EGHWHT
Trigger: TGTGTGCCAATGGCCTTCTCATTTACAAAGACAGAC...AAATGAACCATGGCTTTGAGATATTAGACTAAACATGAGGTTGCCCTTCCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp TGTATGGGAATAGTAGAGACCAGAGCTGTTAAGGTATGGTTTGCTGTTGGCATTGGTGGTTTGGCAATTTaGATCCAATGGTACTCTCAA +
Preference number: 4 (lower is better)
Translates to: CMGIVETRAVKVWFAVGIGGLAI*IQWYSQ
Trigger: TTGAGAGTACCATTGGATTCAAATTGCCAAACCACC...AATGCCAACAGCAAACCATACCTTAACAGCTCTGGTCTCTACTATTCCCATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp GAACAGGGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAATGTGGTTGTCGTTGTTaGCGCGGACTCAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: EQGSRVSRSGYITNNILECGCRC*RGLRCD
Trigger: ATCACATCTGAGTCCGCGTCAACAACGACAACCACA...TTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp TGTTCTCCTGACACGTGTCAATTACAATTATGCCCAAAACATTCTAAGTTTTGTACAGCAAATGAGAGGTaGCAGGGGGCACATGCAAGT +
Preference number: 4 (lower is better)
Translates to: CSPDTCQLQLCPKHSKFCTANER*QGAHAS
Trigger: ACTTGCATGTGCCCCCTGTCACCTCTCATTTGCTGT...ACAAAACTTAGAATGTTTTGGGCATAATTGTAATTGACACGTGTCAGGAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR GCA 90 bp ATGATCTTACCAGTTTGCACTGAATTTAGAATGTGTATAGACCTGGACTTCAAAACGCTCAAATTGTGGTaGCGGCCTGTCTATGAGGGT +
Preference number: 4 (lower is better)
Translates to: MILPVCTEFRMCIDLDFKTLKLW*RPVYEG
Trigger: ACCCTCATAGACAGGCCGGCACCACAATTTGAGCGT...TTTGAAGTCCAGGTCTATACACATTCTAAATTCAGTGCAAACTGGTAAGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR GCA 90 bp GGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAGTGTATCACTCTCACTGCTGCTaGTGCTGCTCTCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: GSRVSRSGYITNNILEVYHSHCC*CCSQKT
Trigger: TGTCTTCTGAGAGCAGCAGCAGCAGCAGTGAGAGTG...ATACACTTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp ATGATCTTACCAGTTTGCACTGAATTTAGAATGTGTATAGACCTGGACTTCAAATCAGAGTCCTTGGCATaGTGCAGGTCAACACCGTAC +
Preference number: 4 (lower is better)
Translates to: MILPVCTEFRMCIDLDFKSESLA*CRSTPY
Trigger: GTACGGTGTTGACCTGCACCATGCCAAGGACTCTGA...TTTGAAGTCCAGGTCTATACACATTCTAAATTCAGTGCAAACTGGTAAGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp AGTGTAATTTACATACAGACTTGGGCTCATAAGTGCAAGTGCAATATTGAGTTTCACCTTCAGAGTCCTTaGCATGGTGCAGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: SVIYIQTWAHKCKCNIEFHLQSP*HGAGQH
Trigger: GTGTTGACCTGCACCATGCCAAGGACTCTGAAGGTG...AAACTCAATATTGCACTTGCACTTATGAGCCCAAGTCTGTATGTAAATTACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp GGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAGTGTATGGGTGTAGCTTTTGTTaGGCTTTTGCTGTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: GSRVSRSGYITNNILEVYGCSFC*AFAVPP
Trigger: CGGAGGGACAGCAAAAGCCCAACAAAAGCTACACCC...ATACACTTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GAACAGGGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAACCTGATGTTTCAGAATaGCCTCCTGGGCCTTATCCA +
Preference number: 4 (lower is better)
Translates to: EQGSRVSRSGYITNNILEPDVSE*PPGPYP
Trigger: TGGATAAGGCCCAGGAGGCCATTCTGAAACATCAGG...TTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS-3UTR CCA 90 bp GAACAGGGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAGCAACTACATGTTCCTaGGCCTCTGTTTCTACTGGG +
Preference number: 4 (lower is better)
Translates to: EQGSRVSRSGYITNNILEATTCS*ASVSTG
Trigger: CCCAGTAGAAACAGAGGCCCAGGAACATGTAGTTGC...TTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp ATGATCTTACCAGTTTGCACTGAATTTAGAATGTGTATAGACCTGGACTTCAAAATGGGGACGCAATGCTaGACATCAGCAGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: MILPVCTEFRMCIDLDFKMGTQC*TSAGRK
Trigger: TTTCCTCCCTGCTGATGTCCAGCATTGCGTCCCCAT...TTTGAAGTCCAGGTCTATACACATTCTAAATTCAGTGCAAACTGGTAAGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp GAACAGGGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAGGAGATAAGCCCCTGTaGGTTTTATGCAGTTCTGAC +
Preference number: 4 (lower is better)
Translates to: EQGSRVSRSGYITNNILEGDKPL*VLCSSD
Trigger: GTCAGAACTGCATAAAACTCACAGGGGCTTATCTCC...TTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp GATGGGAAGGGCAACCTCATGTTTAGTCTAATATCTCAAAGCCATGGTTCATTTGGTGGTTTGGCAATTTaGATCCAATGGTACTCTCAA +
Preference number: 4 (lower is better)
Translates to: DGKGNLMFSLISQSHGSFGGLAI*IQWYSQ
Trigger: TTGAGAGTACCATTGGATTCAAATTGCCAAACCACC...AAATGAACCATGGCTTTGAGATATTAGACTAAACATGAGGTTGCCCTTCCCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp GGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAGTGTATGAGCTGCGTCTCCTGTaGTCACAATGCGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: GSRVSRSGYITNNILEVYELRLL*SQCVSQ
Trigger: TTGAGAAACGCATTGTGATCACAGGAGACGCAGCTC...ATACACTTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR TCA 90 bp AGTGTAATTTACATACAGACTTGGGCTCATAAGTGCAAGTGCAATATTGAGTTTATGAAGTACAGCAAATaGGAGGTGACAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: SVIYIQTWAHKCKCNIEFMKYSK*EVTGGT
Trigger: TGTGCCCCCTGTCACCTCTCATTTGCTGTACTTCAT...AAACTCAATATTGCACTTGCACTTATGAGCCCAAGTCTGTATGTAAATTACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp GATGGGAAGGGCAACCTCATGTTTAGTCTAATATCTCAAAGCCATGGTTCATTTGTAAGGAGGAAAAGATaGAGTACAGCAAATGAGAGG +
Preference number: 4 (lower is better)
Translates to: DGKGNLMFSLISQSHGSFVRRKR*STANER
Trigger: CCTCTCATTTGCTGTACTTCATCTTTTCCTCCTTAC...AAATGAACCATGGCTTTGAGATATTAGACTAAACATGAGGTTGCCCTTCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR GCA 90 bp AGAAAGAAATCTCTAAGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAACTTCTTCACTTCAGATaGAGAGCCAACTTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: RKKSLRLEAAWFSLSKRELLHFR*RANFSS
Trigger: ACTACTGAAGTTGGCTCTGCATCTGAAGTGAAGAAG...TTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCTTAGAGATTTCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR GCA 90 bp AGTGTAATTTACATACAGACTTGGGCTCATAAGTGCAAGTGCAATATTGAGTTTTTTCAAGGCTGGTTTTaGTTCCCTGACCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: SVIYIQTWAHKCKCNIEFFQGWF*FPDLHL
Trigger: CAGGTGGAGGTCAGGGAAGCAAAACCAGCCTTGAAA...AAACTCAATATTGCACTTGCACTTATGAGCCCAAGTCTGTATGTAAATTACACT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR GCA 90 bp ATGATCTTACCAGTTTGCACTGAATTTAGAATGTGTATAGACCTGGACTTCAAATGTCTCCCTTTTGGCTaGACCTCCTTCCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: MILPVCTEFRMCIDLDFKCLPFG*TSFQFL
Trigger: GAGAAACTGGAAGGAGGTGCAGCCAAAAGGGAGACA...TTTGAAGTCCAGGTCTATACACATTCTAAATTCAGTGCAAACTGGTAAGATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp GAACAGGGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAACCCTTTTCTTCCTCTaGCTCAGATACTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: EQGSRVSRSGYITNNILETLFFL*LRYWSL
Trigger: CAGACTCCAGTATCTGAGCCAGAGGAAGAAAAGGGT...TTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AGTGTAATTTACATACAGACTTGGGCTCATAAGTGCAAGTGCAATATTGAGTTTCTAGAAGGGTCACTTTaGCCAGGACAGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: SVIYIQTWAHKCKCNIEFLEGSL*PGQSWS
Trigger: AGACCAAGACTGTCCTGGCCAAAGTGACCCTTCTAG...AAACTCAATATTGCACTTGCACTTATGAGCCCAAGTCTGTATGTAAATTACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp ATGATCTTACCAGTTTGCACTGAATTTAGAATGTGTATAGACCTGGACTTCAAACTTTGGTGGCTGCTCTaGAGACACAAGCCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: MILPVCTEFRMCIDLDFKLWWLL*RHKPVE
Trigger: TTCTACAGGCTTGTGTCTCCAGAGCAGCCACCAAAG...TTTGAAGTCCAGGTCTATACACATTCTAAATTCAGTGCAAACTGGTAAGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp TTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGACAACAAATAATCTCTaGCAAACCATCAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: FCWSSGTALRLGMVKVLQTTNNL*QTIKVK
Trigger: CTTGACCTTGATGGTTTGCCAGAGATTATTTGTTGT...CTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR CCA 90 bp ATGATCTTACCAGTTTGCACTGAATTTAGAATGTGTATAGACCTGGACTTCAAATTCATCAAGGAGGGATaGGAAGCCAGAGGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: MILPVCTEFRMCIDLDFKFIKEG*EARGKA
Trigger: TGCTTTGCCTCTGGCTTCCCATCCCTCCTTGATGAA...TTTGAAGTCCAGGTCTATACACATTCTAAATTCAGTGCAAACTGGTAAGATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp TGTTCTCCTGACACGTGTCAATTACAATTATGCCCAAAACATTCTAAGTTTTGTATGTCCTGCCTTAGCTaGAGGCACAAGAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: CSPDTCQLQLCPKHSKFCMSCLS*RHKKYL
Trigger: CAGATACTTCTTGTGCCTTCAGCTAAGGCAGGACAT...ACAAAACTTAGAATGTTTTGGGCATAATTGTAATTGACACGTGTCAGGAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp GGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGATTCATGAAGTTAAAGCCAAGCAAAACGATTaGTCCTTAGTCTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: GTALRLGMVKVLQIHEVKAKQND*SLVCLC
Trigger: ACAAAGACAGACTAAGGATCAATCGTTTTGCTTGGC...TTTAACTTCATGAATCTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp GGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGATTCATGAAGTTAAAGGTGGTTTGGCAATTTaGATCCAATGGTACTCTCAA +
Preference number: 4 (lower is better)
Translates to: GTALRLGMVKVLQIHEVKGGLAI*IQWYSQ
Trigger: TTGAGAGTACCATTGGATTCAAATTGCCAAACCACC...TTTAACTTCATGAATCTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp TGTTCTCCTGACACGTGTCAATTACAATTATGCCCAAAACATTCTAAGTTTTGTACCCTTTTCTTCCTCTaGCTCAGATACTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: CSPDTCQLQLCPKHSKFCTLFFL*LRYWSL
Trigger: CAGACTCCAGTATCTGAGCCAGAGGAAGAAAAGGGT...ACAAAACTTAGAATGTTTTGGGCATAATTGTAATTGACACGTGTCAGGAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp TGTTCTCCTGACACGTGTCAATTACAATTATGCCCAAAACATTCTAAGTTTTGTACAACACTTGTCCCTTaGCACGTTTCTCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: CSPDTCQLQLCPKHSKFCTTLVP*HVSQGH
Trigger: GTGACCTTGAGAAACGTGCCAAGGGACAAGTGTTGT...ACAAAACTTAGAATGTTTTGGGCATAATTGTAATTGACACGTGTCAGGAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp ATGATCTTACCAGTTTGCACTGAATTTAGAATGTGTATAGACCTGGACTTCAAAGGTCAACACCGTACATaGAAAGCCTCTTTGCGTTCT +
Preference number: 4 (lower is better)
Translates to: MILPVCTEFRMCIDLDFKGQHRT*KASLRS
Trigger: AGAACGCAAAGAGGCTTTCCATGTACGGTGTTGACC...TTTGAAGTCCAGGTCTATACACATTCTAAATTCAGTGCAAACTGGTAAGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp ATGCACATGGCTAGACTCTATATTATAAGGGGGAACATAACAAAAACAGGAGGGTGCTTCTTCTTCCTCTaGTTTGTCACTCAAATCACA +
Preference number: 4 (lower is better)
Translates to: MHMARLYIIRGNITKTGGCFFFL*FVTQIT
Trigger: TGTGATTTGAGTGACAAACCAGAGGAAGAAGAAGCA...CCCTCCTGTTTTTGTTATGTTCCCCCTTATAATATAGAGTCTAGCCATGTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp GGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAGTGTATATTCAGAGTCTCATGTaGACTCGCTTGTGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: GSRVSRSGYITNNILEVYIQSLM*TRLWLE
Trigger: TTCCAACCACAAGCGAGTTCACATGAGACTCTGAAT...ATACACTTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
CDS-3UTR GCA 90 bp TGTTCTCCTGACACGTGTCAATTACAATTATGCCCAAAACATTCTAAGTTTTGTAGGCATGATGGTCACTaGTTCTTCTTCCTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: CSPDTCQLQLCPKHSKFCRHDGH*FFFLWF
Trigger: AAACCAGAGGAAGAAGAAGCAGTGACCATCATGCCT...ACAAAACTTAGAATGTTTTGGGCATAATTGTAATTGACACGTGTCAGGAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp AGTGTAATTTACATACAGACTTGGGCTCATAAGTGCAAGTGCAATATTGAGTTTCTCTGGCTCAGATACTaGAGTCTGCTCATTTTCTAC +
Preference number: 4 (lower is better)
Translates to: SVIYIQTWAHKCKCNIEFLWLRY*SLLIFY
Trigger: GTAGAAAATGAGCAGACTCCAGTATCTGAGCCAGAG...AAACTCAATATTGCACTTGCACTTATGAGCCCAAGTCTGTATGTAAATTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp ATTTTAATTCTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTTATCTCCTCCATCTTTaGCTACTACTAAATTGTAAG +
Preference number: 4 (lower is better)
Translates to: ILILQASGHCYQSEHSFAYLLHL*LLLNCK
Trigger: CTTACAATTTAGTAGTAGCCAAAGATGGAGGAGATA...AGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAGAATTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGATTCATGAAGTTAAACTGTTCCAGCTCTGCTaGTCTAACTTTAATGTAGAA +
Preference number: 4 (lower is better)
Translates to: GTALRLGMVKVLQIHEVKLFQLC*SNFNVE
Trigger: TTCTACATTAAAGTTAGACCAGCAGAGCTGGAACAG...TTTAACTTCATGAATCTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR TCA 90 bp ATGATCTTACCAGTTTGCACTGAATTTAGAATGTGTATAGACCTGGACTTCAAAAGTTTTATGCAGTTCTaGCACCTTTTCCTCCAACTC +
Preference number: 4 (lower is better)
Translates to: MILPVCTEFRMCIDLDFKSFMQF*HLFLQL
Trigger: GAGTTGGAGGAAAAGGTGTCAGAACTGCATAAAACT...TTTGAAGTCCAGGTCTATACACATTCTAAATTCAGTGCAAACTGGTAAGATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR TCA 90 bp AGTGTAATTTACATACAGACTTGGGCTCATAAGTGCAAGTGCAATATTGAGTTTGCCAAGCAAAACGATTaGTCCTTAGTCTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: SVIYIQTWAHKCKCNIEFAKQND*SLVCLC
Trigger: ACAAAGACAGACTAAGGATCAATCGTTTTGCTTGGC...AAACTCAATATTGCACTTGCACTTATGAGCCCAAGTCTGTATGTAAATTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR GCA 90 bp AGAAAGAAATCTCTAAGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAATCAGATACTGGAGTCTaGTCATTTTCTACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: RKKSLRLEAAWFSLSKRESDTGV*SFSTSL
Trigger: TAAAGAAGTAGAAAATGAGCAGACTCCAGTATCTGA...TTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCTTAGAGATTTCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp AGAAAGAAATCTCTAAGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAATATCTCCTCCATCTTTaGCTACTACTAAATTGTAAG +
Preference number: 4 (lower is better)
Translates to: RKKSLRLEAAWFSLSKREYLLHL*LLLNCK
Trigger: CTTACAATTTAGTAGTAGCCAAAGATGGAGGAGATA...TTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCTTAGAGATTTCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CCA 90 bp GATGGGAAGGGCAACCTCATGTTTAGTCTAATATCTCAAAGCCATGGTTCATTTTATCTCCTCCATCTTTaGCTACTACTAAATTGTAAG +
Preference number: 4 (lower is better)
Translates to: DGKGNLMFSLISQSHGSFYLLHL*LLLNCK
Trigger: CTTACAATTTAGTAGTAGCCAAAGATGGAGGAGATA...AAATGAACCATGGCTTTGAGATATTAGACTAAACATGAGGTTGCCCTTCCCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CCA 90 bp AGTGTAATTTACATACAGACTTGGGCTCATAAGTGCAAGTGCAATATTGAGTTTCTGTTCCAGCTCTGCTaGTCTAACTTTAATGTAGAA +
Preference number: 4 (lower is better)
Translates to: SVIYIQTWAHKCKCNIEFLFQLC*SNFNVE
Trigger: TTCTACATTAAAGTTAGACCAGCAGAGCTGGAACAG...AAACTCAATATTGCACTTGCACTTATGAGCCCAAGTCTGTATGTAAATTACACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR GCA 90 bp AGTGTAATTTACATACAGACTTGGGCTCATAAGTGCAAGTGCAATATTGAGTTTTCAGATACTGGAGTCTaGTCATTTTCTACTTCTTTA +
Preference number: 4 (lower is better)
Translates to: SVIYIQTWAHKCKCNIEFSDTGV*SFSTSL
Trigger: TAAAGAAGTAGAAAATGAGCAGACTCCAGTATCTGA...AAACTCAATATTGCACTTGCACTTATGAGCCCAAGTCTGTATGTAAATTACACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS TCA 90 bp CCGACGTGGGAGGACGAGTCGCTTGTGGTTGGAAAGGCAGAGGTGTaGCCCGCCGCTTCTCCCATTCACTGGGGCGAGGCTCAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: PTWEDESLVVGKAEV*PAASPIHWGEAQVW
Trigger: CCACACCTGAGCCTCGCCCCAGTGAATGGGAGAAGCGGCGGGTCACACCTCTGCCTTTCCAACCACAAGCGACTCGTCCTCCCACGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS CCA 90 bp CCAGTGCAAGGCCCTTCCGACGTGGGAGGACGAGTCGCTTGTGGTTaGAAAGGCAGAGGTGTGACCCGCCGCTTCTCCCATTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: PVQGPSDVGGRVACG*KGRGVTRRFSHSLG
Trigger: CCCCAGTGAATGGGAGAAGCGGCGGGTCACACCTCTGCCTTTCCAACCACAAGCGACTCGTCCTCCCACGTCGGAAGGGCCTTGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS GCA 90 bp TACATGTTCCTGGGCCTCTGTTTCTACTGGGAGCACACTGGCCCCTaGTTGTCTGTCTGGGACGGCGTCGGGCACTGCTGCCTCCCTCTC +
Preference number: 5 (lower is better)
Translates to: YMFLGLCFYWEHTGP*LSVWDGVGHCCLPL
Trigger: GAGAGGGAGGCAGCAGTGCCCGACGCCGTCCCAGACAGACAAGCAGGGGCCAGTGTGCTCCCAGTAGAAACAGAGGCCCAGGAACATGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS CCA 90 bp TCCTGCTCTTCCCTTATGGTGCCCTCGGTCACTCGGTGGTGGGGCTaGTACTCTCCCACGTCCTCCTCACTCTCACTGCTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SCSSLMVPSVTRWWG*YSPTSSSLSLLLLL
Trigger: CAGCAGCAGCAGCAGTGAGAGTGAGGAGGACGTGGGAGAGTACCAGCCCCACCACCGAGTGACCGAGGGCACCATAAGGGAAGAGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000217943.2
ENSMUST00000218903.2
CDS CCA 90 bp CACTCCTCCTGCTCTTCCCTTATGGTGCCCTCGGTCACTCGGTGGTaGGGCTGGTACTCTCCCACGTCCTCCTCACTCTCACTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HSSCSSLMVPSVTRW*GWYSPTSSSLSLLL
Trigger: CAGCAGCAGTGAGAGTGAGGAGGACGTGGGAGAGTACCAGCCCCACCACCGAGTGACCGAGGGCACCATAAGGGAAGAGCAGGAGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000217943.2
ENSMUST00000218903.2
CDS CCA 90 bp GGGCAACTACATGTTCCTGGGCCTCTGTTTCTACTGGGAGCACACTaGCCCCTGCTTGTCTGTCTGGGACGGCGTCGGGCACTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: GQLHVPGPLFLLGAH*PLLVCLGRRRALLP
Trigger: AGGCAGCAGTGCCCGACGCCGTCCCAGACAGACAAGCAGGGGCCAGTGTGCTCCCAGTAGAAACAGAGGCCCAGGAACATGTAGTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS CCA 90 bp GGGTCCAGTGCAAGGCCCTTCCGACGTGGGAGGACGAGTCGCTTGTaGTTGGAAAGGCAGAGGTGTGACCCGCCGCTTCTCCCATTCACT +
Preference number: 5 (lower is better)
Translates to: GSSARPFRRGRTSRL*LERQRCDPPLLPFT
Trigger: AGTGAATGGGAGAAGCGGCGGGTCACACCTCTGCCTTTCCAACCACAAGCGACTCGTCCTCCCACGTCGGAAGGGCCTTGCACTGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS CCA 90 bp CTGATAACTCCAGGGCCAGGCACTGAGCCCTCTCCAGGAGGGCTTTaGTCCACAACACCAATCGGGGCTCCGTCTAGGCTCCTCGAGACA +
Preference number: 5 (lower is better)
Translates to: LITPGPGTEPSPGGL*STTPIGAPSRLLET
Trigger: TGTCTCGAGGAGCCTAGACGGAGCCCCGATTGGTGTTGTGGACCAAAGCCCTCCTGGAGAGGGCTCAGTGCCTGGCCCTGGAGTTATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220121.2
CDS CCA 90 bp TCACACTCCTCCTGCTCTTCCCTTATGGTGCCCTCGGTCACTCGGTaGTGGGGCTGGTACTCTCCCACGTCCTCCTCACTCTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: SHSSCSSLMVPSVTR*WGWYSPTSSSLSLL
Trigger: CAGCAGTGAGAGTGAGGAGGACGTGGGAGAGTACCAGCCCCACCACCGAGTGACCGAGGGCACCATAAGGGAAGAGCAGGAGGAGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000217943.2
ENSMUST00000218903.2
CDS GCA 90 bp CCCTGTTCTCAGACGGATCCTTCCCTCGTTTCCGCAGGCGGGGAGTaGTTTGCCTCTCAACCGGAGGACCTGGCTGGGAACCCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: PCSQTDPSLVSAGGE*FASQPEDLAGNPFL
Trigger: AAGAAAAGGGTTCCCAGCCAGGTCCTCCGGTTGAGAGGCAAAGCACTCCCCGCCTGCGGAAACGAGGGAAGGATCCGTCTGAGAACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219166.2
ENSMUST00000219224.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000219967.2
ENSMUST00000220121.2
CDS GCA 90 bp TTGTGGTGCCGGCCTGTCTATGAGGGTACTTGCTTCTCTGGTCTGTaGCTGCGTGCGGCCGCTGTAGCGGAATTTGGACCCCAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: LWCRPVYEGTCFSGL*LRAAAVAEFGPQGQ
Trigger: TTGACCCTGGGGTCCAAATTCCGCTACAGCGGCCGCACGCAGGCACAGACCAGAGAAGCAAGTACCCTCATAGACAGGCCGGCACCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220121.2
CDS GCA 90 bp GGTGGTGGGGCTGGTACTCTCCCACGTCCTCCTCACTCTCACTGCTaGTGCTGCTGCTCTCAGAAGACAGGGAGGTGGAGTCTTTGTGTG +
Preference number: 5 (lower is better)
Translates to: GGGAGTLPRPPHSHC*CCCSQKTGRWSLCV
Trigger: CACACAAAGACTCCACCTCCCTGTCTTCTGAGAGCAGCAGCAGCAGCAGTGAGAGTGAGGAGGACGTGGGAGAGTACCAGCCCCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000217943.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCTACTACCTTGGCTCCTaGGCCGGGCTCTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLYYLGS*AGLFLQ
Trigger: CTGGAGGAAGAGCCCGGCCAAGGAGCCAAGGTAGTA...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS TCA 90 bp GCCATCCTGGATGGTAGTATAGCTGATAACTCCAGGGCCAGGCACTaGGCCCTCTCCAGGAGGGCTTTGGTCCACAACACCAATCGGGGC +
Preference number: 5 (lower is better)
Translates to: AILDGSIADNSRARH*ALSRRALVHNTNRG
Trigger: GCCCCGATTGGTGTTGTGGACCAAAGCCCTCCTGGAGAGGGCTCAGTGCCTGGCCCTGGAGTTATCAGCTATACTACCATCCAGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220121.2
CDS TCA 90 bp TCAGAGTCTCATGTGAACTCGCTTGTGGTTGGAAAGGCAGAGGTGTaGCCCGCCGCTTCTCCCATTCACTGGGGCGAGGCTCAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: SESHVNSLVVGKAEV*PAASPIHWGEAQVW
Trigger: CCACACCTGAGCCTCGCCCCAGTGAATGGGAGAAGCGGCGGGTCACACCTCTGCCTTTCCAACCACAAGCGAGTTCACATGAGACTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
CDS TCA 90 bp TTATCTCCTCTTCTAGGCTCGCTTGTGGTTGGAAAGGCAGAGGTGTaGCCCGCCGCTTCTCCCATTCACTGGGGCGAGGCTCAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: LSPLLGSLVVGKAEV*PAASPIHWGEAQVW
Trigger: CCACACCTGAGCCTCGCCCCAGTGAATGGGAGAAGCGGCGGGTCACACCTCTGCCTTTCCAACCACAAGCGAGCCTAGAAGAGGAGATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217943.2
CDS GCA 90 bp TTCTCAGACGGATCCTTCCCTCGTTTCCGCAGGCGGGGAGTGCTTTaGCTCTCAACCGGAGGACCTGGCTGGGAACCCTTTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: FSDGSFPRFRRRGVL*LSTGGPGWEPFSSS
Trigger: AGAGGAAGAAAAGGGTTCCCAGCCAGGTCCTCCGGTTGAGAGGCAAAGCACTCCCCGCCTGCGGAAACGAGGGAAGGATCCGTCTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219166.2
ENSMUST00000219224.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000219967.2
ENSMUST00000220121.2
CDS CCA 90 bp TTGCTTCTCTGGTCTGTGCCTGCGTGCGGCCGCTGTAGCGGAATTTaGACCCCAGGGTCAAGAACTTGGTCTTTGGTGGCTGCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: LLLWSVPACGRCSGI*TPGSRTWSLVAALE
Trigger: CTCCAGAGCAGCCACCAAAGACCAAGTTCTTGACCCTGGGGTCCAAATTCCGCTACAGCGGCCGCACGCAGGCACAGACCAGAGAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220121.2
CDS CCA 90 bp GCTGGACATCAGCAGGGAGGAAAGAAACCCAGAGCTTGGGGAGGCTaGGGAACGCCAGGTAGCCATCTTCATCAAGGAGGGATGGGAAGC +
Preference number: 5 (lower is better)
Translates to: AGHQQGGKKPRAWGG*GTPGSHLHQGGMGS
Trigger: GCTTCCCATCCCTCCTTGATGAAGATGGCTACCTGGCGTTCCCCAGCCTCCCCAAGCTCTGGGTTTCTTTCCTCCCTGCTGATGTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS CCA 90 bp GGACGCAATGCTGGACATCAGCAGGGAGGAAAGAAACCCAGAGCTTaGGGAGGCTGGGGAACGCCAGGTAGCCATCTTCATCAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: GRNAGHQQGGKKPRA*GGWGTPGSHLHQGG
Trigger: CCCTCCTTGATGAAGATGGCTACCTGGCGTTCCCCAGCCTCCCCAAGCTCTGGGTTTCTTTCCTCCCTGCTGATGTCCAGCATTGCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CAA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCCCCAGGGTCAAGAACTaGGTCTTTGGTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLPRVKN*VFGGCS
Trigger: AGAGCAGCCACCAAAGACCAAGTTCTTGACCCTGGG...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCACGAGTCGCTTGTGGTaGGAAAGGCAGAGGTGTGAC +
Preference number: 5 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLTSRLW*ERQRCD
Trigger: GTCACACCTCTGCCTTTCCAACCACAAGCGACTCGT...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS GCA 90 bp GACCTCCACCTGAACCTCCAGGTGCTTCCTCTGAGCCATTTCTTCTaGGTCACCCTTGGCCCGACTCTCTTCTTCAGGAAGGGATTCCTC +
Preference number: 5 (lower is better)
Translates to: DLHLNLQVLPLSHFF*VTLGPTLFFRKGFL
Trigger: GAGGAATCCCTTCCTGAAGAAGAGAGTCGGGCCAAGGGTGACGCAGAAGAAATGGCTCAGAGGAAGCACCTGGAGGTTCAGGTGGAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000219967.2
ENSMUST00000220121.2
CDS GCA 90 bp AGGAGGAGTGAAGGGATGAAGGAAGGCGATGTGATGGGGACGCAATaGTGGACATCAGCAGGGAGGAAAGAAACCCAGAGCTTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: RRSEGMKEGDVMGTQ*WTSAGRKETQSLGR
Trigger: CCTCCCCAAGCTCTGGGTTTCTTTCCTCCCTGCTGATGTCCAGCATTGCGTCCCCATCACATCGCCTTCCTTCATCCCTTCACTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS CCA 90 bp CCTCACTTCTTCAGCAGGCTGGGTCTCCACGCTGCTTTTCAAGGCTaGTTTTGCTTCCCTGACCTCCACCTGAACCTCCAGGTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: PHFFSRLGLHAAFQG*FCFPDLHLNLQVLP
Trigger: AGGAAGCACCTGGAGGTTCAGGTGGAGGTCAGGGAAGCAAAACCAGCCTTGAAAAGCAGCGTGGAGACCCAGCCTGCTGAAGAAGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000220121.2
CDS CCA 90 bp CCAATGTGGCCACTTCAGAGTCACCCTGCTCTGATGTCCCACCCATaGAAAGCAGCTCGAAGCTATCGAGTGTGGTCTGATCAGCCTCCC +
Preference number: 5 (lower is better)
Translates to: PMWPLQSHPALMSHP*KAARSYRVWSDQPP
Trigger: GGGAGGCTGATCAGACCACACTCGATAGCTTCGAGCTGCTTTCCATGGGTGGGACATCAGAGCAGGGTGACTCTGAAGTGGCCACATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS CCA 90 bp AGGAGTGAAGGGATGAAGGAAGGCGATGTGATGGGGACGCAATGCTaGACATCAGCAGGGAGGAAAGAAACCCAGAGCTTGGGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: RSEGMKEGDVMGTQC*TSAGRKETQSLGRL
Trigger: CAGCCTCCCCAAGCTCTGGGTTTCTTTCCTCCCTGCTGATGTCCAGCATTGCGTCCCCATCACATCGCCTTCCTTCATCCCTTCACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS GCA 90 bp GGCAAACCATCAAGGTCAAGATGGGGCACCTCTCCATTAACTCTGTaGGGGTCTTCCTCTGCTTCTTCTCTCGGGTCCTGCTCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: GKPSRSRWGTSPLTL*GSSSASSLGSCSAV
Trigger: CACTGCTGAGCAGGACCCGAGAGAAGAAGCAGAGGAAGACCCGCACAGAGTTAATGGAGAGGTGCCCCATCTTGACCTTGATGGTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTTTTCCTCCAACTCCTaGGTGTGGGCCGGGGCAAAC +
Preference number: 5 (lower is better)
Translates to: GWKLPGFLLVKGKGTRCGFSSNS*VWAGAN
Trigger: GTTTGCCCCGGCCCACACCAAGGAGTTGGAGGAAAA...ACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGCCCAGGGTCAAGAACTaGGTCTTTGGTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: QSACLRSTALWAEGLSTQPRVKN*VFGGCS
Trigger: AGAGCAGCCACCAAAGACCAAGTTCTTGACCCTGGG...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp TGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGGGAGGTGGAGTCTTaGTGTGCCACAGGCTCCACC +
Preference number: 5 (lower is better)
Translates to: WSLLPVGAQFCWSSGTALREVES*CATGST
Trigger: GGTGGAGCCTGTGGCACACAAAGACTCCACCTCCCT...TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp CTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGAGGGAGGTGGAGTCTTaGTGTGCCACAGGCTCCACC +
Preference number: 5 (lower is better)
Translates to: LQASGHCYQSEHSFAGVVREVES*CATGST
Trigger: GGTGGAGCCTGTGGCACACAAAGACTCCACCTCCCT...CACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp CAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTATACTACCTTGGCTCCTaGGCCGGGCTCTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: QASGHCYQSEHSFAGVVVYYLGS*AGLFLQ
Trigger: CTGGAGGAAGAGCCCGGCCAAGGAGCCAAGGTAGTA...TACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp CCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGTACTACCTTGGCTCCTaGGCCGGGCTCTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: PVGAQFCWSSGTALRLGMYYLGS*AGLFLQ
Trigger: CTGGAGGAAGAGCCCGGCCAAGGAGCCAAGGTAGTA...CATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GCACCTGTTCAGGTGAACAGCGCCTTACCAGCCCGGCTGGCTTTGTTCACTGTCGCCAACTCTGTTTCTTaGTGCACTACCACCCTTGTG +
Preference number: 5 (lower is better)
Translates to: APVQVNSALPARLALFTVANSVS*CTTTLV
Trigger: CACAAGGGTGGTAGTGCACAAAGAAACAGAGTTGGC...GACAGTGAACAAAGCCAGCCGGGCTGGTAAGGCGCTGTTCACCTGAACAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS TCA 90 bp TGCATTAGCGTTCACAACAGGGCCCTCTGCTGTCCAAGTGGTGGCTaGAGGGAAGGAGGCTTTCACACTAAGAGAAAAGCCCTGCCCACT +
Preference number: 5 (lower is better)
Translates to: CISVHNRALCCPSGG*REGGFHTKRKALPT
Trigger: AGTGGGCAGGGCTTTTCTCTTAGTGTGAAAGCCTCCTTCCCTTCAGCCACCACTTGGACAGCAGAGGGCCCTGTTGTGAACGCTAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217943.2
CDS CCA 90 bp TTCTCCTCCACTACATTCAGAGTCTCATGTGAACTCGCTTGTGGTTaGAAAGGCAGAGGTGTGACCCGCCGCTTCTCCCATTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: FSSTTFRVSCELACG*KGRGVTRRFSHSLG
Trigger: CCCCAGTGAATGGGAGAAGCGGCGGGTCACACCTCTGCCTTTCCAACCACAAGCGAGTTCACATGAGACTCTGAATGTAGTGGAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
CDS-3UTR CAA 90 bp TCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTTTTCCTCCAACTCCTaGGTGTGGGCCGGGGCAAAC +
Preference number: 5 (lower is better)
Translates to: SSCSGMLWQSACLRSTALFSSNS*VWAGAN
Trigger: GTTTGCCCCGGCCCACACCAAGGAGTTGGAGGAAAA...CAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp AGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCTCAAGAACTTGGTCTTaGGTGGCTGCTCTGGAGACA +
Preference number: 5 (lower is better)
Translates to: REGHTVWFSSCSGMLWQSSRTWS*VAALET
Trigger: TGTCTCCAGAGCAGCCACCAAAGACCAAGTTCTTGA...GCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACCGTGTGCCCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCGCCATGAAATTGCGCTaGAGTTCACTAATGCTAGCC +
Preference number: 5 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLAMKLR*SSLMLA
Trigger: GGCTAGCATTAGTGAACTCAAGCGCAATTTCATGGC...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp AGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCCCACCTTTCACAGTCTaGGTGATGTGTGTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: REGHTVWFSSCSGMLWQSPPFTV*VMCVVV
Trigger: GACAACCACACACATCACCAAGACTGTGAAAGGTGG...GCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACCGTGTGCCCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS TCA 90 bp AACCTCTGCCCGCTTCTTCTCCTCCACTACATTCAGAGTCTCATGTaGACTCTTTCCCTCAGCGGGCAGGGGTGTAGCTTTTGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: NLCPLLLLHYIQSLM*TLSLSGQGCSFCWA
Trigger: AGCCCAACAAAAGCTACACCCCTGCCCGCTGAGGGAAAGAGTTCACATGAGACTCTGAATGTAGTGGAGGAGAAGAAGCGGGCAGAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS TCA 90 bp CAAGGACTGGCAGGAGGTAAGGAGGAAAAGATGAAGTACAGCAAATaGGAGGTGACAGGGGGCACATGCAAGTGGTCTTTCCCTCAGCGG +
Preference number: 5 (lower is better)
Translates to: QGLAGGKEEKMKYSK*EVTGGTCKWSFPQR
Trigger: CCGCTGAGGGAAAGACCACTTGCATGTGCCCCCTGTCACCTCTCATTTGCTGTACTTCATCTTTTCCTCCTTACCTCCTGCCAGTCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS TCA 90 bp GATGTCCCACCCATGGAAAGCAGCTCGAAGCTATCGAGTGTGGTCTaGTCAGCCTCCCCAAAAGGGTCTTCCTCTGAAATGTCTGACAGC +
Preference number: 5 (lower is better)
Translates to: DVPPMESSSKLSSVV*SASPKGSSSEMSDS
Trigger: GCTGTCAGACATTTCAGAGGAAGACCCTTTTGGGGAGGCTGATCAGACCACACTCGATAGCTTCGAGCTGCTTTCCATGGGTGGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS TCA 90 bp ACAGCCGACCTGACAGTCTTCTCAGGCATGGAAGGACAGTCAGGTTaGCGAGGGGCTACAATAGGATCTAAGACCGAATCCAATGTGGCC +
Preference number: 5 (lower is better)
Translates to: TADLTVFSGMEGQSG*RGATIGSKTESNVA
Trigger: GGCCACATTGGATTCGGTCTTAGATCCTATTGTAGCCCCTCGTCAACCTGACTGTCCTTCCATGCCTGAGAAGACTGTCAGGTCGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS CCA 90 bp GCTCTGATGTCCCACCCATGGAAAGCAGCTCGAAGCTATCGAGTGTaGTCTGATCAGCCTCCCCAAAAGGGTCTTCCTCTGAAATGTCTG +
Preference number: 5 (lower is better)
Translates to: ALMSHPWKAARSYRV*SDQPPQKGLPLKCL
Trigger: CAGACATTTCAGAGGAAGACCCTTTTGGGGAGGCTGATCAGACCACACTCGATAGCTTCGAGCTGCTTTCCATGGGTGGGACATCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS CCA 90 bp GGGGAGGCTGGGGAACGCCAGGTAGCCATCTTCATCAAGGAGGGATaGGAAGCCAGAGGCAAAGCATTTGTGAAAGGTAAAGGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: GEAGERQVAIFIKEG*EARGKAFVKGKGEV
Trigger: TACTTCTCCTTTACCTTTCACAAATGCTTTGCCTCTGGCTTCCCATCCCTCCTTGATGAAGATGGCTACCTGGCGTTCCCCAGCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS CCA 90 bp CTAAACAGAATGGATGTTATCTCCTCTTCTAGGCTCGCTTGTGGTTaGAAAGGCAGAGGTGTGACCCGCCGCTTCTCCCATTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: LNRMDVISSSRLACG*KGRGVTRRFSHSLG
Trigger: CCCCAGTGAATGGGAGAAGCGGCGGGTCACACCTCTGCCTTTCCAACCACAAGCGAGCCTAGAAGAGGAGATAACATCCATTCTGTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217943.2
CDS-3UTR CAA 90 bp AACCAACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCATCGGTCAAACAACACTaGTCCCTTGGCACGTTTCTC +
Preference number: 5 (lower is better)
Translates to: NQPNPRPTVPNLFFPVSSSVKQH*SLGTFL
Trigger: GAGAAACGTGCCAAGGGACAAGTGTTGTTTGACCGA...TGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp CCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTTTTTCCTCCAACTCCTaGGTGTGGGCCGGGGCAAAC +
Preference number: 5 (lower is better)
Translates to: PGFLLVKGKGTRCGSPPVFSSNS*VWAGAN
Trigger: GTTTGCCCCGGCCCACACCAAGGAGTTGGAGGAAAA...AACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCCCCAGGGTCAAGAACTaGGTCTTTGGTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVPRVKN*VFGGCS
Trigger: AGAGCAGCCACCAAAGACCAAGTTCTTGACCCTGGG...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACGTGGACGCCATGAAATaGCGCTTGAGTTCACTAATG +
Preference number: 5 (lower is better)
Translates to: VAKRMSEKYCTVGRGSLNVDAMK*RLSSLM
Trigger: CATTAGTGAACTCAAGCGCAATTTCATGGCGTCCAC...GTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGGCCAACTCTGTTTCTTaGTGCACTACCACCCTTGTG +
Preference number: 5 (lower is better)
Translates to: QSACLRSTALWAEGLSTQANSVS*CTTTLV
Trigger: CACAAGGGTGGTAGTGCACAAAGAAACAGAGTTGGC...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS TCA 90 bp GGTGTGGACGCCATGAAATTGCGCTTGAGTTCACTAATGCTAGCCTaGTGTTTCAGAATGGCCTCCTGGGCCTTATCCAGGTCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: GVDAMKLRLSSLMLA*CFRMASWALSRSSN
Trigger: GTTGGAGGACCTGGATAAGGCCCAGGAGGCCATTCTGAAACATCAGGCTAGCATTAGTGAACTCAAGCGCAATTTCATGGCGTCCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS CCA 90 bp GCTGTAGCGGAATTTGGACCCCAGGGTCAAGAACTTGGTCTTTGGTaGCTGCTCTGGAGACACAAGCCTGTAGAAAGTGTGATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: AVAEFGPQGQELGLW*LLWRHKPVESVMFH
Trigger: GTGGAACATCACACTTTCTACAGGCTTGTGTCTCCAGAGCAGCCACCAAAGACCAAGTTCTTGACCCTGGGGTCCAAATTCCGCTACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000220121.2
CDS-3UTR CAA 90 bp TGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGTACCTGGTCAACAACACTTGTCCCTaGGCACGTTTCTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: CLRSTALWAEGLSTQYLVNNTCP*ARFSRS
Trigger: TGACCTTGAGAAACGTGCCAAGGGACAAGTGTTGTT...GACCAGGTACTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGAACAACACTTGTCCCTaGGCACGTTTCTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: QSACLRSTALWAEGLSTQNNTCP*ARFSRS
Trigger: TGACCTTGAGAAACGTGCCAAGGGACAAGTGTTGTT...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTCAAGAACTTGGTCTTaGGTGGCTGCTCTGGAGACA +
Preference number: 5 (lower is better)
Translates to: GVVLLLFWNAVAKRMSEKSRTWS*VAALET
Trigger: TGTCTCCAGAGCAGCCACCAAAGACCAAGTTCTTGA...CTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp TTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGACCCAGGGTCAAGAACTaGGTCTTTGGTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LPVGAQFCWSSGTALRLGPRVKN*VFGGCS
Trigger: AGAGCAGCCACCAAAGACCAAGTTCTTGACCCTGGG...TCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp AACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAAAGCGCCATGAAATTGCGCTaGAGTTCACTAATGCTAGCC +
Preference number: 5 (lower is better)
Translates to: NQTPDRLSPTSSSQCLQSAMKLR*SSLMLA
Trigger: GGCTAGCATTAGTGAACTCAAGCGCAATTTCATGGC...GCTTTGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCTGTGTGTGGTTGTCGTaGTTGACGCGGACTCAGATG +
Preference number: 5 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVCVWLS*LTRTQM
Trigger: CATCTGAGTCCGCGTCAACAACGACAACCACACACA...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR CAA 90 bp GGTGTGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGGCCAACTCTGTTTCTTaGTGCACTACCACCCTTGTG +
Preference number: 5 (lower is better)
Translates to: GVVLLLFWNAVAKRMSEKANSVS*CTTTLV
Trigger: CACAAGGGTGGTAGTGCACAAAGAAACAGAGTTGGC...CTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS GCA 90 bp CAGGACAGTCTTGGTCTTCTTGGTAGCTTTCTGAGAGGCCACCTCTaGCTTCAGCTCACTTGTCTGTACTTCCTTTGTCTCCCTTTTGGC +
Preference number: 5 (lower is better)
Translates to: QDSLGLLGSFLRGHL*LQLTCLYFLCLPFG
Trigger: GCCAAAAGGGAGACAAAGGAAGTACAGACAAGTGAGCTGAAGGCAGAGGTGGCCTCTCAGAAAGCTACCAAGAAGACCAAGACTGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000220121.2
CDS GCA 90 bp TCTTTGTGTGCCACAGGCTCCACCTTACGAGTCTCCCCAGGACCATaGCCCGGTGACATCTCTTTACCATTCATTTCTTCTGTGATTACG +
Preference number: 5 (lower is better)
Translates to: SLCATGSTLRVSPGP*PGDISLPFISSVIT
Trigger: CGTAATCACAGAAGAAATGAATGGTAAAGAGATGTCACCGGGGCATGGTCCTGGGGAGACTCGTAAGGTGGAGCCTGTGGCACACAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000217943.2
ENSMUST00000218903.2
CDS CCA 90 bp CGGAGGACCTGGCTGGGAACCCTTTTCTTCCTCTGGCTCAGATACTaGAGTCTGCTCATTTTCTACTTCTTTAGCTTTCTCCTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: RRTWLGTLFFLWLRY*SLLIFYFFSFLLGG
Trigger: GCCTCCAAGGAGAAAGCTAAAGAAGTAGAAAATGAGCAGACTCCAGTATCTGAGCCAGAGGAAGAAAAGGGTTCCCAGCCAGGTCCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219166.2
ENSMUST00000219224.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000219967.2
ENSMUST00000220121.2
CDS CCA 90 bp CGGGGCAAACTGGAAGTCACCAAGATCAATACTGTCATATTCTTCTaGGTCATAGTCCCCATGCTCGGCCTGCAAGGTGTAGGATCCCAA +
Preference number: 5 (lower is better)
Translates to: RGKLEVTKINTVIFF*VIVPMLGLQGVGSQ
Trigger: TTGGGATCCTACACCTTGCAGGCCGAGCATGGGGACTATGACCCAGAAGAATATGACAGTATTGATCTTGGTGACTTCCAGTTTGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000220121.2
CDS-3UTR CAA 90 bp CAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTATCAAGAACTTGGTCTTaGGTGGCTGCTCTGGAGACA +
Preference number: 5 (lower is better)
Translates to: QASGHCYQSEHSFAGVVVSRTWS*VAALET
Trigger: TGTCTCCAGAGCAGCCACCAAAGACCAAGTTCTTGA...TACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTGCCATGAAATTGCGCTaGAGTTCACTAATGCTAGCC +
Preference number: 5 (lower is better)
Translates to: GWKLPGFLLVKGKGTRCGAMKLR*SSLMLA
Trigger: GGCTAGCATTAGTGAACTCAAGCGCAATTTCATGGC...ACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGAGGGAGGTGGAGTCTTaGTGTGCCACAGGCTCCACC +
Preference number: 5 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGREVES*CATGST
Trigger: GGTGGAGCCTGTGGCACACAAAGACTCCACCTCCCT...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp AGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGACAATGGGGACTTCCTaGGTGGAGATTTCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: RLEAAWFSLSKREGHTVWTMGTS*VEISVL
Trigger: AAGGACAGAAATCTCCACCAAGGAAGTCCCCATTGT...CCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp CAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCAACACAGGGTTTTGGTCTCAGTTaGAACAATGGGGACTTCCTT +
Preference number: 5 (lower is better)
Translates to: QSACLRSTALWAEGLSTQGFGLS*NNGDFL
Trigger: AAGGAAGTCCCCATTGTTCAAACTGAGACCAAAACC...CTGTGTTGAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp AACCAACCAAACCCCCGACCGACTGTCCCCAACCTCTTCTTCCCAGTGTCTTCAGGTTTTGGTCTCAGTTaGAACAATGGGGACTTCCTT +
Preference number: 5 (lower is better)
Translates to: NQPNPRPTVPNLFFPVSSGFGLS*NNGDFL
Trigger: AAGGAAGTCCCCATTGTTCAAACTGAGACCAAAACC...TGAAGACACTGGGAAGAAGAGGTTGGGGACAGTCGGTCGGGGGTTTGGTTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp TGGTTCTCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTTGTGTGTGGTTGTCGTaGTTGACGCGGACTCAGATG +
Preference number: 5 (lower is better)
Translates to: WFSSCSGMLWQSACLRSTCVWLS*LTRTQM
Trigger: CATCTGAGTCCGCGTCAACAACGACAACCACACACA...AGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGAGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp TGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTACCACCTTTCACAGTCTaGGTGATGTGTGTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: WSLLPVGAQFCWSSGTALPPFTV*VMCVVV
Trigger: GACAACCACACACATCACCAAGACTGTGAAAGGTGG...TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR CAA 90 bp CCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGCCACCTTTCACAGTCTaGGTGATGTGTGTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: PVGAQFCWSSGTALRLGMPPFTV*VMCVVV
Trigger: GACAACCACACACATCACCAAGACTGTGAAAGGTGG...CATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR CAA 90 bp TCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTGCCAACTCTGTTTCTTaGTGCACTACCACCCTTGTG +
Preference number: 5 (lower is better)
Translates to: SGFWSLLPVGAQFCWSSGANSVS*CTTTLV
Trigger: CACAAGGGTGGTAGTGCACAAAGAAACAGAGTTGGC...ACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp CAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTATTGTCTGTACTTCCTTaGTCTCCCTTTTGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: QASGHCYQSEHSFAGVVVLSVLP*SPFWLH
Trigger: GTGCAGCCAAAAGGGAGACAAAGGAAGTACAGACAA...TACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp TTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGTTTTCCTCCAACTCCTaGGTGTGGGCCGGGGCAAAC +
Preference number: 5 (lower is better)
Translates to: FCWSSGTALRLGMVKVLQFSSNS*VWAGAN
Trigger: GTTTGCCCCGGCCCACACCAAGGAGTTGGAGGAAAA...CTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp AGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGCGGTGGTTTGGCAATTaGAATCCAATGGTACTCTCA +
Preference number: 5 (lower is better)
Translates to: RLEAAWFSLSKREGHTVWRWFGN*NPMVLS
Trigger: TGAGAGTACCATTGGATTCAAATTGCCAAACCACCG...CCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp CTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTTCAAGAACTTGGTCTTaGGTGGCTGCTCTGGAGACA +
Preference number: 5 (lower is better)
Translates to: LLPVGAQFCWSSGTALRLSRTWS*VAALET
Trigger: TGTCTCCAGAGCAGCCACCAAAGACCAAGTTCTTGA...AAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGTGGGCCGAGGGTCTCTCGTGAGGCATCAGAAATaGTTACCATCTCTGTTTTTA +
Preference number: 5 (lower is better)
Translates to: AVAKRMSEKYCTVGRGSLVRHQK*LPSLFL
Trigger: TAAAAACAGAGATGGTAACAATTTCTGATGCCTCAC...GAGAGACCCTCGGCCCACAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp TCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGACAATGGGGACTTCCTaGGTGGAGATTTCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: SSCSGMLWQSACLRSTALTMGTS*VEISVL
Trigger: AAGGACAGAAATCTCCACCAAGGAAGTCCCCATTGT...CAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp TTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGACCACCTTTCACAGTCTaGGTGATGTGTGTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: LPVGAQFCWSSGTALRLGPPFTV*VMCVVV
Trigger: GACAACCACACACATCACCAAGACTGTGAAAGGTGG...TCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR CAA 90 bp TCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACCACCTTTCACAGTCTaGGTGATGTGTGTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: SLLPVGAQFCWSSGTALRPPFTV*VMCVVV
Trigger: GACAACCACACACATCACCAAGACTGTGAAAGGTGG...TCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS-3UTR CAA 90 bp CCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTGCCAACTCTGTTTCTTaGTGCACTACCACCCTTGTG +
Preference number: 5 (lower is better)
Translates to: PGFLLVKGKGTRCGSPPVANSVS*CTTTLV
Trigger: CACAAGGGTGGTAGTGCACAAAGAAACAGAGTTGGC...AACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp TTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAGCCAACTCTGTTTCTTaGTGCACTACCACCCTTGTG +
Preference number: 5 (lower is better)
Translates to: LPVGAQFCWSSGTALRLGANSVS*CTTTLV
Trigger: CACAAGGGTGGTAGTGCACAAAGAAACAGAGTTGGC...TCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
ENSMUST00000220290.2
CDS CCA 90 bp TTGCCTCTCAACCGGAGGACCTGGCTGGGAACCCTTTTCTTCCTCTaGCTCAGATACTGGAGTCTGCTCATTTTCTACTTCTTTAGCTTT +
Preference number: 5 (lower is better)
Translates to: LPLNRRTWLGTLFFL*LRYWSLLIFYFFSF
Trigger: AAAGCTAAAGAAGTAGAAAATGAGCAGACTCCAGTATCTGAGCCAGAGGAAGAAAAGGGTTCCCAGCCAGGTCCTCCGGTTGAGAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219166.2
ENSMUST00000219224.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000219967.2
ENSMUST00000220121.2
CDS CCA 90 bp GGCTCTGAACAACAAATAATCTCTGGCAAACCATCAAGGTCAAGATaGGGCACCTCTCCATTAACTCTGTGCGGGTCTTCCTCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: GSEQQIISGKPSRSR*GTSPLTLCGSSSAS
Trigger: AGAAGCAGAGGAAGACCCGCACAGAGTTAATGGAGAGGTGCCCCATCTTGACCTTGATGGTTTGCCAGAGATTATTTGTTGTTCAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp TTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGATTGTCTGTACTTCCTTaGTCTCCCTTTTGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LPVGAQFCWSSGTALRLGLSVLP*SPFWLH
Trigger: GTGCAGCCAAAAGGGAGACAAAGGAAGTACAGACAA...TCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp TTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAAACAACACTTGTCCCTaGGCACGTTTCTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: LPVGAQFCWSSGTALRLGNNTCP*ARFSRS
Trigger: TGACCTTGAGAAACGTGCCAAGGGACAAGTGTTGTT...TCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp TCCTCCTGTTCTGGAATGCTGTGGCAAAGCGCATGTCTGAGAAGTACTGCACTGGGCCAAGCAAAACGATaGATCCTTAGTCTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: SSCSGMLWQSACLRSTALGQAKR*ILSLSL
Trigger: CAAAGACAGACTAAGGATCAATCGTTTTGCTTGGCC...CAGTGCAGTACTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAACAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp TGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTACGGTGGTTTGGCAATTaGAATCCAATGGTACTCTCA +
Preference number: 5 (lower is better)
Translates to: WSLLPVGAQFCWSSGTALRWFGN*NPMVLS
Trigger: TGAGAGTACCATTGGATTCAAATTGCCAAACCACCG...TAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAGTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp CCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGCGGTGGTTTGGCAATTaGAATCCAATGGTACTCTCA +
Preference number: 5 (lower is better)
Translates to: PVGAQFCWSSGTALRLGMRWFGN*NPMVLS
Trigger: TGAGAGTACCATTGGATTCAAATTGCCAAACCACCG...CATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCCGGTGGTTTGGCAATTaGAATCCAATGGTACTCTCA +
Preference number: 5 (lower is better)
Translates to: VGAQFCWSSGTALRLGMVRWFGN*NPMVLS
Trigger: TGAGAGTACCATTGGATTCAAATTGCCAAACCACCG...GACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp CTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGTGGACGCCATGAAATaGCGCTTGAGTTCACTAATG +
Preference number: 5 (lower is better)
Translates to: LLPVGAQFCWSSGTALRLVDAMK*RLSSLM
Trigger: CATTAGTGAACTCAAGCGCAATTTCATGGCGTCCAC...AAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp CCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTTGTATCGTTTCCTCCTaGTCCTTCCTCACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: PGFLLVKGKGTRCGSPPVCIVSS*SFLTSS
Trigger: TGAAGAAGTGAGGAAGGACAAGGAGGAAACGATACA...AACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp TGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTGGCCAAGCAAAACGATaGATCCTTAGTCTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: WKLPGFLLVKGKGTRCGSGQAKR*ILSLSL
Trigger: CAAAGACAGACTAAGGATCAATCGTTTTGCTTGGCC...AGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp CCTGGTTTTCTCTTAGTAAAAGGGAAGGGCACACGGTGTGGTTCTCCTCCTGTTGGCCAAGCAAAACGATaGATCCTTAGTCTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: PGFLLVKGKGTRCGSPPVGQAKR*ILSLSL
Trigger: CAAAGACAGACTAAGGATCAATCGTTTTGCTTGGCC...AACAGGAGGAGAACCACACCGTGTGCCCTTCCCTTTTACTAAGAGAAAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp ACACAGTACCTGGTCAGTGAGCTTCTTAATTCTCCAGTCCAGAGAGTCTCTGTCGTGGACGCCATGAAATaGCGCTTGAGTTCACTAATG +
Preference number: 5 (lower is better)
Translates to: TQYLVSELLNSPVQRVSVVDAMK*RLSSLM
Trigger: CATTAGTGAACTCAAGCGCAATTTCATGGCGTCCAC...GACAGAGACTCTCTGGACTGGAGAATTAAGAAGCTCACTGACCAGGTACTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp TTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGTGTGTGTGGTTGTCGTaGTTGACGCGGACTCAGATG +
Preference number: 5 (lower is better)
Translates to: FCWSSGTALRLGMVKVLQCVWLS*LTRTQM
Trigger: CATCTGAGTCCGCGTCAACAACGACAACCACACACA...CTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS CCA 90 bp ATCTCTGAACAACAAATAATCTCTGGCAAACCATCAAGGTCAAGATaGGGCACCTCTCCATTAACTCTGTGCGGGTCTTCCTCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: ISEQQIISGKPSRSR*GTSPLTLCGSSSAS
Trigger: AGAAGCAGAGGAAGACCCGCACAGAGTTAATGGAGAGGTGCCCCATCTTGACCTTGATGGTTTGCCAGAGATTATTTGTTGTTCAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000219372.2
CDS-3UTR CAA 90 bp GAACAGGGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAAGGGAGGTGGAGTCTTaGTGTGCCACAGGCTCCACC +
Preference number: 5 (lower is better)
Translates to: EQGSRVSRSGYITNNILEREVES*CATGST
Trigger: GGTGGAGCCTGTGGCACACAAAGACTCCACCTCCCT...TTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCCCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp TGGAGTAGTGGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGATTCATTCGGTCAAACAACACTaGTCCCTTGGCACGTTTCTC +
Preference number: 5 (lower is better)
Translates to: WSSGTALRLGMVKVLQIHSVKQH*SLGTFL
Trigger: GAGAAACGTGCCAAGGGACAAGTGTTGTTTGACCGA...ATGAATCTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACCACTACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGACAATGGGGACTTCCTaGGTGGAGATTTCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGTMGTS*VEISVL
Trigger: AAGGACAGAAATCTCCACCAAGGAAGTCCCCATTGT...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGTGTATCGTTTCCTCCTaGTCCTTCCTCACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGCIVSS*SFLTSS
Trigger: TGAAGAAGTGAGGAAGGACAAGGAGGAAACGATACA...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GATGGGAAGGGCAACCTCATGTTTAGTCTAATATCTCAAAGCCATGGTTCATTTTCGGTCAAACAACACTaGTCCCTTGGCACGTTTCTC +
Preference number: 5 (lower is better)
Translates to: DGKGNLMFSLISQSHGSFSVKQH*SLGTFL
Trigger: GAGAAACGTGCCAAGGGACAAGTGTTGTTTGACCGA...AAATGAACCATGGCTTTGAGATATTAGACTAAACATGAGGTTGCCCTTCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CAA 90 bp TGTTCTCCTGACACGTGTCAATTACAATTATGCCCAAAACATTCTAAGTTTTGTTTTTCCTCCAACTCCTaGGTGTGGGCCGGGGCAAAC +
Preference number: 5 (lower is better)
Translates to: CSPDTCQLQLCPKHSKFCFSSNS*VWAGAN
Trigger: GTTTGCCCCGGCCCACACCAAGGAGTTGGAGGAAAA...ACAAAACTTAGAATGTTTTGGGCATAATTGTAATTGACACGTGTCAGGAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CAA 90 bp ATGCACATGGCTAGACTCTATATTATAAGGGGGAACATAACAAAAACAGGAGGGTCAAGAACTTGGTCTTaGGTGGCTGCTCTGGAGACA +
Preference number: 5 (lower is better)
Translates to: MHMARLYIIRGNITKTGGSRTWS*VAALET
Trigger: TGTCTCCAGAGCAGCCACCAAAGACCAAGTTCTTGA...CCCTCCTGTTTTTGTTATGTTCCCCCTTATAATATAGAGTCTAGCCATGTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CAA 90 bp CTGTTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGTGAGGCATCAGAAATaGTTACCATCTCTGTTTTTA +
Preference number: 5 (lower is better)
Translates to: LLPVGAQFCWSSGTALRLVRHQK*LPSLFL
Trigger: TAAAAACAGAGATGGTAACAATTTCTGATGCCTCAC...AAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp TTACCAGTCGGAGCACAGTTTTGCTGGAGTAGTGGTACGGCGTTAAGACTTGGAGTGAGGCATCAGAAATaGTTACCATCTCTGTTTTTA +
Preference number: 5 (lower is better)
Translates to: LPVGAQFCWSSGTALRLGVRHQK*LPSLFL
Trigger: TAAAAACAGAGATGGTAACAATTTCTGATGCCTCAC...TCCAAGTCTTAACGCCGTACCACTACTCCAGCAAAACTGTGCTCCGACTGGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS TCA 90 bp AGTTTGAACAATGGGGACTTCCTTGGTGGAGATTTCTGTCCTTTGTaGGGCATCAGAAATTGTTACCATCTCTGTTTTTACCACTGGTGG +
Preference number: 5 (lower is better)
Translates to: SLNNGDFLGGDFCPL*GIRNCYHLCFYHWW
Trigger: CCACCAGTGGTAAAAACAGAGATGGTAACAATTTCTGATGCCTCACAAAGGACAGAAATCTCCACCAAGGAAGTCCCCATTGTTCAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp TGTATGGGAATAGTAGAGACCAGAGCTGTTAAGGTATGGTTTGCTGTTGGCATTTGTATCGTTTCCTCCTaGTCCTTCCTCACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: CMGIVETRAVKVWFAVGICIVSS*SFLTSS
Trigger: TGAAGAAGTGAGGAAGGACAAGGAGGAAACGATACA...AATGCCAACAGCAAACCATACCTTAACAGCTCTGGTCTCTACTATTCCCATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp AGAAAGAAATCTCTAAGGCTGGAAGCTGCCTGGTTTTCTCTTAGTAAAAGGGAATTGTCTGTACTTCCTTaGTCTCCCTTTTGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: RKKSLRLEAAWFSLSKRELSVLP*SPFWLH
Trigger: GTGCAGCCAAAAGGGAGACAAAGGAAGTACAGACAA...TTCCCTTTTACTAAGAGAAAACCAGGCAGCTTCCAGCCTTAGAGATTTCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GATGGGAAGGGCAACCTCATGTTTAGTCTAATATCTCAAAGCCATGGTTCATTTTTGTCTGTACTTCCTTaGTCTCCCTTTTGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: DGKGNLMFSLISQSHGSFLSVLP*SPFWLH
Trigger: GTGCAGCCAAAAGGGAGACAAAGGAAGTACAGACAA...AAATGAACCATGGCTTTGAGATATTAGACTAAACATGAGGTTGCCCTTCCCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CAA 90 bp TGTTCTCCTGACACGTGTCAATTACAATTATGCCCAAAACATTCTAAGTTTTGTCCCAGGGTCAAGAACTaGGTCTTTGGTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: CSPDTCQLQLCPKHSKFCPRVKN*VFGGCS
Trigger: AGAGCAGCCACCAAAGACCAAGTTCTTGACCCTGGG...ACAAAACTTAGAATGTTTTGGGCATAATTGTAATTGACACGTGTCAGGAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CAA 90 bp ATTTTAATTCTTCAGGCTTCTGGTCACTGTTACCAGTCGGAGCACAGTTTTGCTGGTTTTGGTCTCAGTTaGAACAATGGGGACTTCCTT +
Preference number: 5 (lower is better)
Translates to: ILILQASGHCYQSEHSFAGFGLS*NNGDFL
Trigger: AAGGAAGTCCCCATTGTTCAAACTGAGACCAAAACC...AGCAAAACTGTGCTCCGACTGGTAACAGTGACCAGAAGCCTGAAGAATTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp GAACAGGGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAATCGGTCAAACAACACTaGTCCCTTGGCACGTTTCTC +
Preference number: 5 (lower is better)
Translates to: EQGSRVSRSGYITNNILESVKQH*SLGTFL
Trigger: GAGAAACGTGCCAAGGGACAAGTGTTGTTTGACCGA...TTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp ATGCACATGGCTAGACTCTATATTATAAGGGGGAACATAACAAAAACAGGAGGGGGCCAAGCAAAACGATaGATCCTTAGTCTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: MHMARLYIIRGNITKTGGGQAKR*ILSLSL
Trigger: CAAAGACAGACTAAGGATCAATCGTTTTGCTTGGCC...CCCTCCTGTTTTTGTTATGTTCCCCCTTATAATATAGAGTCTAGCCATGTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CAA 90 bp GGTACGGCGTTAAGACTTGGAATGGTCAAAGTTCTTCAGATTCATGAAGTTAAATGTATCGTTTCCTCCTaGTCCTTCCTCACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: GTALRLGMVKVLQIHEVKCIVSS*SFLTSS
Trigger: TGAAGAAGTGAGGAAGGACAAGGAGGAAACGATACA...TTTAACTTCATGAATCTGAAGAACTTTGACCATTCCAAGTCTTAACGCCGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GAACAGGGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAAACAACACTTGTCCCTaGGCACGTTTCTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: EQGSRVSRSGYITNNILENNTCP*ARFSRS
Trigger: TGACCTTGAGAAACGTGCCAAGGGACAAGTGTTGTT...TTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAGTGTATTCGGTCAAACAACACTaGTCCCTTGGCACGTTTCTC +
Preference number: 5 (lower is better)
Translates to: GSRVSRSGYITNNILEVYSVKQH*SLGTFL
Trigger: GAGAAACGTGCCAAGGGACAAGTGTTGTTTGACCGA...ATACACTTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp AGACAAGTTTCATACAAAGCAAGTGTTCAGACAGTGGGAAGAACTGGAACTGGGGTGAGGCATCAGAAATaGTTACCATCTCTGTTTTTA +
Preference number: 5 (lower is better)
Translates to: RQVSYKASVQTVGRTGTGVRHQK*LPSLFL
Trigger: TAAAAACAGAGATGGTAACAATTTCTGATGCCTCAC...CCCAGTTCCAGTTCTTCCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp AGTGTAATTTACATACAGACTTGGGCTCATAAGTGCAAGTGCAATATTGAGTTTAACAACACTTGTCCCTaGGCACGTTTCTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: SVIYIQTWAHKCKCNIEFNNTCP*ARFSRS
Trigger: TGACCTTGAGAAACGTGCCAAGGGACAAGTGTTGTT...AAACTCAATATTGCACTTGCACTTATGAGCCCAAGTCTGTATGTAAATTACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CAA 90 bp GAACAGGGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAGGCCAAGCAAAACGATaGATCCTTAGTCTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: EQGSRVSRSGYITNNILEGQAKR*ILSLSL
Trigger: CAAAGACAGACTAAGGATCAATCGTTTTGCTTGGCC...TTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCCCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS-3UTR CAA 90 bp GGGAGCAGGGTGTCTAGAAGTGGTTATATAACAAACAATATATTAGAAGTGTATACAATGGGGACTTCCTaGGTGGAGATTTCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: GSRVSRSGYITNNILEVYTMGTS*VEISVL
Trigger: AAGGACAGAAATCTCCACCAAGGAAGTCCCCATTGT...ATACACTTCTAATATATTGTTTGTTATATAACCACTTCTAGACACCCTGCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000220290.2
CDS-3UTR CAA 90 bp GATGGGAAGGGCAACCTCATGTTTAGTCTAATATCTCAAAGCCATGGTTCATTTTCTTCTTCCTCTGGTTaGTCACTCAAATCACAATCA +
Preference number: 5 (lower is better)
Translates to: DGKGNLMFSLISQSHGSFSSSSG*SLKSQS
Trigger: TGATTGTGATTTGAGTGACAAACCAGAGGAAGAAGA...AAATGAACCATGGCTTTGAGATATTAGACTAAACATGAGGTTGCCCTTCCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CAA 90 bp AGTGTAATTTACATACAGACTTGGGCTCATAAGTGCAAGTGCAATATTGAGTTTTGTATCGTTTCCTCCTaGTCCTTCCTCACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SVIYIQTWAHKCKCNIEFCIVSS*SFLTSS
Trigger: TGAAGAAGTGAGGAAGGACAAGGAGGAAACGATACA...AAACTCAATATTGCACTTGCACTTATGAGCCCAAGTCTGTATGTAAATTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS-3UTR CAA 90 bp ATGATCTTACCAGTTTGCACTGAATTTAGAATGTGTATAGACCTGGACTTCAAACGGTGGTTTGGCAATTaGAATCCAATGGTACTCTCA +
Preference number: 5 (lower is better)
Translates to: MILPVCTEFRMCIDLDFKRWFGN*NPMVLS
Trigger: TGAGAGTACCATTGGATTCAAATTGCCAAACCACCG...TTTGAAGTCCAGGTCTATACACATTCTAAATTCAGTGCAAACTGGTAAGATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS GCA 72 bp GGCCCCTGCTTGTCTGTCTGGGACGGCGTCGGGCACTaGTGCCTCCCTCTCTACTACCTTGGCTCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: GPCLSVWDGVGH*CLPLYYLGSLA
Trigger: GGCCAAGGAGCCAAGGTAGTAGAGAGGGAGGCAGCAGTGCCCGACGCCGTCCCAGACAGACAAGCAGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS GCA 72 bp CTGGGCCTCTGTTTCTACTGGGAGCACACTGGCCCCTaGTTGTCTGTCTGGGACGGCGTCGGGCACTGCTGC +
Preference number: 6 (lower is better)
Translates to: LGLCFYWEHTGP*LSVWDGVGHCC
Trigger: GCAGCAGTGCCCGACGCCGTCCCAGACAGACAAGCAGGGGCCAGTGTGCTCCCAGTAGAAACAGAGGCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS CCA 72 bp CCAGGGCCAGGCACTGAGCCCTCTCCAGGAGGGCTTTaGTCCACAACACCAATCGGGGCTCCGTCTAGGCTC +
Preference number: 6 (lower is better)
Translates to: PGPGTEPSPGGL*STTPIGAPSRL
Trigger: GAGCCTAGACGGAGCCCCGATTGGTGTTGTGGACCAAAGCCCTCCTGGAGAGGGCTCAGTGCCTGGCCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220121.2
CDS CCA 72 bp CAGCGTCCCTGGGTCCAGTGCAAGGCCCTTCCGACGTaGGAGGACGAGTCTCAGGCGAGTGTGAAAAGGGCG +
Preference number: 6 (lower is better)
Translates to: QRPWVQCKALPT*EDESQASVKRA
Trigger: CGCCCTTTTCACACTCGCCTGAGACTCGTCCTCCCACGTCGGAAGGGCCTTGCACTGGACCCAGGGACGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217943.2
CDS GCA 72 bp CAGACGGATCCTTCCCTCGTTTCCGCAGGCGGGGAGTaGTTTGCCTCTCAACCGGAGGACCTGGCTGGGAAC +
Preference number: 6 (lower is better)
Translates to: QTDPSLVSAGGE*FASQPEDLAGN
Trigger: GTTCCCAGCCAGGTCCTCCGGTTGAGAGGCAAAGCACTCCCCGCCTGCGGAAACGAGGGAAGGATCCGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219166.2
ENSMUST00000219224.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000219967.2
ENSMUST00000220121.2
CDS CCA 72 bp TTCTACTGGGAGCACACTGGCCCCTGCTTGTCTGTCTaGGACGGCGTCGGGCACTGCTGCCTCCCTCTCTAC +
Preference number: 6 (lower is better)
Translates to: FYWEHTGPCLSV*DGVGHCCLPLY
Trigger: GTAGAGAGGGAGGCAGCAGTGCCCGACGCCGTCCCAGACAGACAAGCAGGGGCCAGTGTGCTCCCAGTAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS CCA 72 bp GCAAGGCCCTTCCGACGTGGGAGGACGAGTCGCTTGTaGTTGGAAAGGCAGAGGTGTGACCCGCCGCTTCTC +
Preference number: 6 (lower is better)
Translates to: ARPFRRGRTSRL*LERQRCDPPLL
Trigger: GAGAAGCGGCGGGTCACACCTCTGCCTTTCCAACCACAAGCGACTCGTCCTCCCACGTCGGAAGGGCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS CCA 72 bp CAGCGTCCCTGGGTCCAGTGCAAGGCCCTTCCGACGTaGGAGGACGAGTCGCTTGTGGTTGGAAAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: QRPWVQCKALPT*EDESLVVGKAE
Trigger: CTCTGCCTTTCCAACCACAAGCGACTCGTCCTCCCACGTCGGAAGGGCCTTGCACTGGACCCAGGGACGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS CAA 72 bp CGGATCCTTCCCTCGTTTCCGCAGGCGGGGAGTGCTTaGCCTCTCAACCGGAGGACCTGGCTGGGAACCCTT +
Preference number: 6 (lower is better)
Translates to: RILPSFPQAGSA*PLNRRTWLGTL
Trigger: AAGGGTTCCCAGCCAGGTCCTCCGGTTGAGAGGCAAAGCACTCCCCGCCTGCGGAAACGAGGGAAGGATCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219166.2
ENSMUST00000219224.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000219967.2
ENSMUST00000220121.2
CDS CAA 72 bp AGGCCCTTCCGACGTGGGAGGACGAGTCGCTTGTGGTaGGAAAGGCAGAGGTGTGACCCGCCGCTTCTCCCA +
Preference number: 6 (lower is better)
Translates to: RPFRRGRTSRLW*ERQRCDPPLLP
Trigger: TGGGAGAAGCGGCGGGTCACACCTCTGCCTTTCCAACCACAAGCGACTCGTCCTCCCACGTCGGAAGGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS CAA 90 bp CCTGGGTCCAGTGCAAGGCCCTTCCGACGTGGGAGGACGAGTCGCTaGTGGTTGGAAAGGCAGAGGTGTGACCCGCCGCTTCTCCCATTC +
Preference number: 6 (lower is better)
Translates to: PGSSARPFRRGRTSR*WLERQRCDPPLLPF
Trigger: GAATGGGAGAAGCGGCGGGTCACACCTCTGCCTTTCCAACCACAAGCGACTCGTCCTCCCACGTCGGAAGGGCCTTGCACTGGACCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS CAA 90 bp GCGGTCAGTAACACGCCCGAATCACCACCAGCCCCGCCGTCAATCTaGGCTCCTTGGCCGGGCTCTTCCTCCAGCTCTTCATCACACTCC +
Preference number: 6 (lower is better)
Translates to: AVSNTPESPPAPPSI*APWPGSSSSSSSHS
Trigger: GGAGTGTGATGAAGAGCTGGAGGAAGAGCCCGGCCAAGGAGCCAAGATTGACGGCGGGGCTGGTGGTGATTCGGGCGTGTTACTGACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217929.2
CDS CAA 90 bp TCCAGTGCAAGGCCCTTCCGACGTGGGAGGACGAGTCGCTTGTGGTaGGAAAGGCAGAGGTGTGACCCGCCGCTTCTCCCATTCACTGGG +
Preference number: 6 (lower is better)
Translates to: SSARPFRRGRTSRLW*ERQRCDPPLLPFTG
Trigger: CCCAGTGAATGGGAGAAGCGGCGGGTCACACCTCTGCCTTTCCAACCACAAGCGACTCGTCCTCCCACGTCGGAAGGGCCTTGCACTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS GCA 72 bp GGATCCTTCCCTCGTTTCCGCAGGCGGGGAGTGCTTTaGCTCTCAACCGGAGGACCTGGCTGGGAACCCTTT +
Preference number: 6 (lower is better)
Translates to: GSFPRFRRRGVL*LSTGGPGWEPF
Trigger: AAAGGGTTCCCAGCCAGGTCCTCCGGTTGAGAGGCAAAGCACTCCCCGCCTGCGGAAACGAGGGAAGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219166.2
ENSMUST00000219224.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000219967.2
ENSMUST00000220121.2
CDS CCA 72 bp TCCCTTATGGTGCCCTCGGTCACTCGGTGGTGGGGCTaGTACTCTCCCACGTCCTCCTCACTCTCACTGCTG +
Preference number: 6 (lower is better)
Translates to: SLMVPSVTRWWG*YSPTSSSLSLL
Trigger: CAGCAGTGAGAGTGAGGAGGACGTGGGAGAGTACCAGCCCCACCACCGAGTGACCGAGGGCACCATAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000217943.2
ENSMUST00000218903.2
CDS CCA 72 bp TCCTGCTCTTCCCTTATGGTGCCCTCGGTCACTCGGTaGTGGGGCTGGTACTCTCCCACGTCCTCCTCACTC +
Preference number: 6 (lower is better)
Translates to: SCSSLMVPSVTR*WGWYSPTSSSL
Trigger: GAGTGAGGAGGACGTGGGAGAGTACCAGCCCCACCACCGAGTGACCGAGGGCACCATAAGGGAAGAGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000217943.2
ENSMUST00000218903.2
CDS CCA 72 bp ACACGCCCGAATCACCACCAGCCCCGCCGTCAATCTTaGCTCCTTGGCCGGGCTCTTCCTCCAGCTCTTCAT +
Preference number: 6 (lower is better)
Translates to: TRPNHHQPRRQS*LLGRALPPALH
Trigger: ATGAAGAGCTGGAGGAAGAGCCCGGCCAAGGAGCCAAGATTGACGGCGGGGCTGGTGGTGATTCGGGCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217929.2
CDS CAA 72 bp AACACGCCCGAATCACCACCAGCCCCGCCGTCAATCTaGGCTCCTTGGCCGGGCTCTTCCTCCAGCTCTTCA +
Preference number: 6 (lower is better)
Translates to: NTPESPPAPPSI*APWPGSSSSSS
Trigger: TGAAGAGCTGGAGGAAGAGCCCGGCCAAGGAGCCAAGATTGACGGCGGGGCTGGTGGTGATTCGGGCGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217929.2
CDS CAA 72 bp AGTGCAAGGCCCTTCCGACGTGGGAGGACGAGTCGCTaGTGGTTGGAAAGGCAGAGGTGTGACCCGCCGCTT +
Preference number: 6 (lower is better)
Translates to: SARPFRRGRTSR*WLERQRCDPPL
Trigger: AAGCGGCGGGTCACACCTCTGCCTTTCCAACCACAAGCGACTCGTCCTCCCACGTCGGAAGGGCCTTGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220290.2
CDS GCA 72 bp CGGCCTGTCTATGAGGGTACTTGCTTCTCTGGTCTGTaGCTGCGTGCGGCCGCTGTAGCGGAATTTGGACCC +
Preference number: 6 (lower is better)
Translates to: RPVYEGTCFSGL*LRAAAVAEFGP
Trigger: GGGTCCAAATTCCGCTACAGCGGCCGCACGCAGGCACAGACCAGAGAAGCAAGTACCCTCATAGACAGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220121.2
CDS CAA 72 bp CGAATCACCACCAGCCCCGCCGTCAATCTTGGCTCCTaGGCCGGGCTCTTCCTCCAGCTCTTCATCACACTC +
Preference number: 6 (lower is better)
Translates to: RITTSPAVNLGS*AGLFLQLFITL
Trigger: GAGTGTGATGAAGAGCTGGAGGAAGAGCCCGGCCAAGGAGCCAAGATTGACGGCGGGGCTGGTGGTGATTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217929.2
CDS CAA 90 bp GTTCTCAGACGGATCCTTCCCTCGTTTCCGCAGGCGGGGAGTGCTTaGCCTCTCAACCGGAGGACCTGGCTGGGAACCCTTTTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: VLRRILPSFPQAGSA*PLNRRTWLGTLFFL
Trigger: GAGGAAGAAAAGGGTTCCCAGCCAGGTCCTCCGGTTGAGAGGCAAAGCACTCCCCGCCTGCGGAAACGAGGGAAGGATCCGTCTGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219166.2
ENSMUST00000219224.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000219967.2
ENSMUST00000220121.2
CDS GCA 72 bp GCTGCTCTCAGAAGACAGGGAGGTGGAGTCTTTGTGTaGCACAGGCTCCACCTTACGAGTCTCCCCAGGACC +
Preference number: 6 (lower is better)
Translates to: AALRRQGGGVFV*HRLHLTSLPRT
Trigger: GGTCCTGGGGAGACTCGTAAGGTGGAGCCTGTGGCACACAAAGACTCCACCTCCCTGTCTTCTGAGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000217943.2
ENSMUST00000218903.2
CDS GCA 72 bp GCTCTTCATCACACTCCTCCTGCTCTTCCCTTATGGTaGCCTCGGTCACTCGGTGGTGGGGCTGGTACTCTC +
Preference number: 6 (lower is better)
Translates to: ALHHTPPALPLW*PRSLGGGAGTL
Trigger: GAGAGTACCAGCCCCACCACCGAGTGACCGAGGGCACCATAAGGGAAGAGCAGGAGGAGTGTGATGAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS GCA 72 bp CTGTGCGGGTCTTCCTCTGCTTCTTCTCTCGGGTCCTaGTCAGCAGTGCCTCCGTGTGCACCCTTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: LCGSSSASSLGS*SAVPPCAPFSP
Trigger: TGGAGAAAAGGGTGCACACGGAGGCACTGCTGAGCAGGACCCGAGAGAAGAAGCAGAGGAAGACCCGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS CCA 72 bp CAGGCGGGGAGTGCTTTGCCTCTCAACCGGAGGACCTaGCTGGGAACCCTTTTCTTCCTCTGGCTCAGATAC +
Preference number: 6 (lower is better)
Translates to: QAGSALPLNRRT*LGTLFFLWLRY
Trigger: GTATCTGAGCCAGAGGAAGAAAAGGGTTCCCAGCCAGGTCCTCCGGTTGAGAGGCAAAGCACTCCCCGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219166.2
ENSMUST00000219224.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000219967.2
ENSMUST00000220121.2
CDS CCA 72 bp TGGTCTGTGCCTGCGTGCGGCCGCTGTAGCGGAATTTaGACCCCAGGGTCAAGAACTTGGTCTTTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: WSVPACGRCSGI*TPGSRTWSLVA
Trigger: AGCCACCAAAGACCAAGTTCTTGACCCTGGGGTCCAAATTCCGCTACAGCGGCCGCACGCAGGCACAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220121.2
CDS GCA 72 bp CTCAAATTGTGGTGCCGGCCTGTCTATGAGGGTACTTaGTTCTCTGGTCTGTGCCTGCGTGCGGCCGCTGTA +
Preference number: 6 (lower is better)
Translates to: LKLWCRPVYEGT*FSGLCLRAAAV
Trigger: TACAGCGGCCGCACGCAGGCACAGACCAGAGAAGCAAGTACCCTCATAGACAGGCCGGCACCACAATTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220121.2
CDS CCA 72 bp CGGGGAGTGCTTTGCCTCTCAACCGGAGGACCTGGCTaGGAACCCTTTTCTTCCTCTGGCTCAGATACTGGA +
Preference number: 6 (lower is better)
Translates to: RGVLCLSTGGPG*EPFSSSGSDTG
Trigger: TCCAGTATCTGAGCCAGAGGAAGAAAAGGGTTCCCAGCCAGGTCCTCCGGTTGAGAGGCAAAGCACTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219166.2
ENSMUST00000219224.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000219967.2
ENSMUST00000220121.2
CDS CCA 72 bp GCTGGACATCAGCAGGGAGGAAAGAAACCCAGAGCTTaGGGAGGCTGGGGAACGCCAGGTAGCCATCTTCAT +
Preference number: 6 (lower is better)
Translates to: AGHQQGGKKPRA*GGWGTPGSHLH
Trigger: ATGAAGATGGCTACCTGGCGTTCCCCAGCCTCCCCAAGCTCTGGGTTTCTTTCCTCCCTGCTGATGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS CAA 72 bp CTGCTGCTGCTCTCAGAAGACAGGGAGGTGGAGTCTTaGTGTGCCACAGGCTCCACCTTACGAGTCTCCCCA +
Preference number: 6 (lower is better)
Translates to: LLLLSEDREVES*CATGSTLRVSP
Trigger: TGGGGAGACTCGTAAGGTGGAGCCTGTGGCACACAAAGACTCCACCTCCCTGTCTTCTGAGAGCAGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000217943.2
ENSMUST00000218903.2
CDS TCA 72 bp GATGGTAGTATAGCTGATAACTCCAGGGCCAGGCACTaGGCCCTCTCCAGGAGGGCTTTGGTCCACAACACC +
Preference number: 6 (lower is better)
Translates to: DGSIADNSRARH*ALSRRALVHNT
Trigger: GGTGTTGTGGACCAAAGCCCTCCTGGAGAGGGCTCAGTGCCTGGCCCTGGAGTTATCAGCTATACTACCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220121.2
CDS GCA 72 bp AGGCTGGGTCTCCACGCTGCTTTTCAAGGCTGGTTTTaGTTCCCTGACCTCCACCTGAACCTCCAGGTGCTT +
Preference number: 6 (lower is better)
Translates to: RLGLHAAFQGWF*FPDLHLNLQVL
Trigger: AAGCACCTGGAGGTTCAGGTGGAGGTCAGGGAAGCAAAACCAGCCTTGAAAAGCAGCGTGGAGACCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000220121.2
CDS TCA 72 bp TCTCCACGCTGCTTTTCAAGGCTGGTTTTGCTTCCCTaGCCTCCACCTGAACCTCCAGGTGCTTCCTCTGAG +
Preference number: 6 (lower is better)
Translates to: SPRCFSRLVLLP*PPPEPPGASSE
Trigger: CTCAGAGGAAGCACCTGGAGGTTCAGGTGGAGGTCAGGGAAGCAAAACCAGCCTTGAAAAGCAGCGTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000220121.2
CDS TCA 72 bp CAGGGCAGGCGGCCAGAGGCGATGTCCTGCCTTAGCTaGAGGCACAAGAAGTATCTGGTGATATCTTCAGTC +
Preference number: 6 (lower is better)
Translates to: QGRRPEAMSCLS*RHKKYLVISSV
Trigger: GACTGAAGATATCACCAGATACTTCTTGTGCCTTCAGCTAAGGCAGGACATCGCCTCTGGCCGCCTGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000220121.2
CDS GCA 72 bp GAAGGGATGAAGGAAGGCGATGTGATGGGGACGCAATaGTGGACATCAGCAGGGAGGAAAGAAACCCAGAGC +
Preference number: 6 (lower is better)
Translates to: EGMKEGDVMGTQ*WTSAGRKETQS
Trigger: GCTCTGGGTTTCTTTCCTCCCTGCTGATGTCCAGCATTGCGTCCCCATCACATCGCCTTCCTTCATCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS CCA 72 bp TCCCACCCATGGAAAGCAGCTCGAAGCTATCGAGTGTaGTCTGATCAGCCTCCCCAAAAGGGTCTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: SHPWKAARSYRV*SDQPPQKGLPL
Trigger: CAGAGGAAGACCCTTTTGGGGAGGCTGATCAGACCACACTCGATAGCTTCGAGCTGCTTTCCATGGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS CCA 72 bp GGGATGAAGGAAGGCGATGTGATGGGGACGCAATGCTaGACATCAGCAGGGAGGAAAGAAACCCAGAGCTTG +
Preference number: 6 (lower is better)
Translates to: GMKEGDVMGTQC*TSAGRKETQSL
Trigger: CAAGCTCTGGGTTTCTTTCCTCCCTGCTGATGTCCAGCATTGCGTCCCCATCACATCGCCTTCCTTCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS GCA 72 bp GCCACAGGCTCCACCTTACGAGTCTCCCCAGGACCATaGCCCGGTGACATCTCTTTACCATTCATTTCTTCT +
Preference number: 6 (lower is better)
Translates to: ATGSTLRVSPGP*PGDISLPFISS
Trigger: AGAAGAAATGAATGGTAAAGAGATGTCACCGGGGCATGGTCCTGGGGAGACTCGTAAGGTGGAGCCTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000217943.2
ENSMUST00000218903.2
CDS CCA 72 bp CCACTTCAGAGTCACCCTGCTCTGATGTCCCACCCATaGAAAGCAGCTCGAAGCTATCGAGTGTGGTCTGAT +
Preference number: 6 (lower is better)
Translates to: PLQSHPALMSHP*KAARSYRVWSD
Trigger: ATCAGACCACACTCGATAGCTTCGAGCTGCTTTCCATGGGTGGGACATCAGAGCAGGGTGACTCTGAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS CCA 72 bp ATGGATGTTATCTCCTCTTCTAGGCTCGCTTGTGGTTaGAAAGGCAGAGGTGTGACCCGCCGCTTCTCCCAT +
Preference number: 6 (lower is better)
Translates to: MDVISSSRLACG*KGRGVTRRFSH
Trigger: ATGGGAGAAGCGGCGGGTCACACCTCTGCCTTTCCAACCACAAGCGAGCCTAGAAGAGGAGATAACATCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217943.2
CDS CAA 72 bp GCTCCTCGAGACACGTTTACTAGAGGCACGCTCAAATaGTGGTGCCGGCCTGTCTATGAGGGTACTTGCTTC +
Preference number: 6 (lower is better)
Translates to: APRDTFTRGTLK*WCRPVYEGTCF
Trigger: GAAGCAAGTACCCTCATAGACAGGCCGGCACCACAATTTGAGCGTGCCTCTAGTAAACGTGTCTCGAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220121.2
CDS TCA 72 bp TGTGTGTGGTTGTCGTTGTTGACGCGGACTCAGATGTaGTGGTTTGTGCGGTCAGTAACACGCCCGAATCAC +
Preference number: 6 (lower is better)
Translates to: CVWLSLLTRTQM*WFVRSVTRPNH
Trigger: GTGATTCGGGCGTGTTACTGACCGCACAAACCATCACATCTGAGTCCGCGTCAACAACGACAACCACACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS TCA 72 bp CCGCTTCTTCTCCTCCACTACATTCAGAGTCTCATGTaGACTCTTTCCCTCAGCGGGCAGGGGTGTAGCTTT +
Preference number: 6 (lower is better)
Translates to: PLLLLHYIQSLM*TLSLSGQGCSF
Trigger: AAAGCTACACCCCTGCCCGCTGAGGGAAAGAGTTCACATGAGACTCTGAATGTAGTGGAGGAGAAGAAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217929.2
ENSMUST00000218903.2
CDS TCA 72 bp CCCATGGAAAGCAGCTCGAAGCTATCGAGTGTGGTCTaGTCAGCCTCCCCAAAAGGGTCTTCCTCTGAAATG +
Preference number: 6 (lower is better)
Translates to: PMESSSKLSSVV*SASPKGSSSEM
Trigger: CATTTCAGAGGAAGACCCTTTTGGGGAGGCTGATCAGACCACACTCGATAGCTTCGAGCTGCTTTCCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS CCA 72 bp CCTCGAGACACGTTTACTAGAGGCACGCTCAAATTGTaGTGCCGGCCTGTCTATGAGGGTACTTGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: PRDTFTRGTLKL*CRPVYEGTCFS
Trigger: AGAGAAGCAAGTACCCTCATAGACAGGCCGGCACCACAATTTGAGCGTGCCTCTAGTAAACGTGTCTCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000220121.2
CDS CCA 72 bp ACTACATTCAGAGTCTCATGTGAACTCGCTTGTGGTTaGAAAGGCAGAGGTGTGACCCGCCGCTTCTCCCAT +
Preference number: 6 (lower is better)
Translates to: TTFRVSCELACG*KGRGVTRRFSH
Trigger: ATGGGAGAAGCGGCGGGTCACACCTCTGCCTTTCCAACCACAAGCGAGTTCACATGAGACTCTGAATGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
CDS CAA 72 bp AGGTGCTCGCACACTCGGTCAAACAACACTTGTCCCTaGGCACGTTTCTCAAGGTCACAGCTGTATTCCGTG +
Preference number: 6 (lower is better)
Translates to: RCSHTRSNNTCP*ARFSRSQLYSV
Trigger: CACGGAATACAGCTGTGACCTTGAGAAACGTGCCAAGGGACAAGTGTTGTTTGACCGAGTGTGCGAGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000220121.2
CDS CAA 72 bp GAGGTTCAGGTGCTCGCACACTCGGTCAAACAACACTaGTCCCTTGGCACGTTTCTCAAGGTCACAGCTGTA +
Preference number: 6 (lower is better)
Translates to: EVQVLAHSVKQH*SLGTFLKVTAV
Trigger: TACAGCTGTGACCTTGAGAAACGTGCCAAGGGACAAGTGTTGTTTGACCGAGTGTGCGAGCACCTGAACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000220121.2
CDS TCA 72 bp CTGACAGTCTTCTCAGGCATGGAAGGACAGTCAGGTTaGCGAGGGGCTACAATAGGATCTAAGACCGAATCC +
Preference number: 6 (lower is better)
Translates to: LTVFSGMEGQSG*RGATIGSKTES
Trigger: GGATTCGGTCTTAGATCCTATTGTAGCCCCTCGTCAACCTGACTGTCCTTCCATGCCTGAGAAGACTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220121.2
CDS CCA 72 bp AACCGGAGGACCTGGCTGGGAACCCTTTTCTTCCTCTaGCTCAGATACTGGAGTCTGCTCATTTTCTACTTC +
Preference number: 6 (lower is better)
Translates to: NRRTWLGTLFFL*LRYWSLLIFYF
Trigger: GAAGTAGAAAATGAGCAGACTCCAGTATCTGAGCCAGAGGAAGAAAAGGGTTCCCAGCCAGGTCCTCCGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219166.2
ENSMUST00000219224.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000219967.2
ENSMUST00000220121.2
CDS CCA 72 bp TGCAGTTCTGACACCTTTTCCTCCAACTCCTTGGTGTaGGCCGGGGCAAACTGGAAGTCACCAAGATCAATA +
Preference number: 6 (lower is better)
Translates to: CSSDTFSSNSLV*AGANWKSPRSI
Trigger: TATTGATCTTGGTGACTTCCAGTTTGCCCCGGCCCACACCAAGGAGTTGGAGGAAAAGGTGTCAGAACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000220121.2
CDS CCA 72 bp GAATTTGGACCCCAGGGTCAAGAACTTGGTCTTTGGTaGCTGCTCTGGAGACACAAGCCTGTAGAAAGTGTG +
Preference number: 6 (lower is better)
Translates to: EFGPQGQELGLW*LLWRHKPVESV
Trigger: CACACTTTCTACAGGCTTGTGTCTCCAGAGCAGCCACCAAAGACCAAGTTCTTGACCCTGGGGTCCAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000220121.2
CDS TCA 72 bp GCCATGAAATTGCGCTTGAGTTCACTAATGCTAGCCTaGTGTTTCAGAATGGCCTCCTGGGCCTTATCCAGG +
Preference number: 6 (lower is better)
Translates to: AMKLRLSSLMLA*CFRMASWALSR
Trigger: CCTGGATAAGGCCCAGGAGGCCATTCTGAAACATCAGGCTAGCATTAGTGAACTCAAGCGCAATTTCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000220290.2
CDS GCA 72 bp CTTGGTCTTCTTGGTAGCTTTCTGAGAGGCCACCTCTaGCTTCAGCTCACTTGTCTGTACTTCCTTTGTCTC +
Preference number: 6 (lower is better)
Translates to: LGLLGSFLRGHL*LQLTCLYFLCL
Trigger: GAGACAAAGGAAGTACAGACAAGTGAGCTGAAGGCAGAGGTGGCCTCTCAGAAAGCTACCAAGAAGACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000220121.2
CDS CCA 72 bp TCCACACACACCTTCCATAGCCGTTTAGCTGCCCGGTaGTTTGGCAATTTGAATCCAATGGTACTCTCAAAC +
Preference number: 6 (lower is better)
Translates to: STHTFHSRLAAR*FGNLNPMVLSN
Trigger: GTTTGAGAGTACCATTGGATTCAAATTGCCAAACCACCGGGCAGCTAAACGGCTATGGAAGGTGTGTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000220121.2
CDS CCA 72 bp CAACAAATAATCTCTGGCAAACCATCAAGGTCAAGATaGGGCACCTCTCCATTAACTCTGTGCGGGTCTTCC +
Preference number: 6 (lower is better)
Translates to: QQIISGKPSRSR*GTSPLTLCGSS
Trigger: GGAAGACCCGCACAGAGTTAATGGAGAGGTGCCCCATCTTGACCTTGATGGTTTGCCAGAGATTATTTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
ENSMUST00000219372.2
CDS CAA 90 bp TCAGATACTGGAGTCTGCTCATTTTCTACTTCTTTAGCTTTCTCCTaGGAGGCATCTGCTCCAGCCTGGTCAGAGCCCTTCTTCACTTCA +
Preference number: 6 (lower is better)
Translates to: SDTGVCSFSTSLAFS*EASAPAWSEPFFTS
Trigger: TGAAGTGAAGAAGGGCTCTGACCAGGCTGGAGCAGATGCCTCCAAGGAGAAAGCTAAAGAAGTAGAAAATGAGCAGACTCCAGTATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219166.2
ENSMUST00000219224.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000219967.2
ENSMUST00000220121.2
CDS GCA 72 bp GAAGGGAAGGAGGCTTTCACACTAAGAGAAAAGCCCTaGCCACTAAACAGAATGGATGTTATCTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: EGKEAFTLREKP*PLNRMDVISSS
Trigger: AGAAGAGGAGATAACATCCATTCTGTTTAGTGGGCAGGGCTTTTCTCTTAGTGTGAAAGCCTCCTTCCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217943.2
CDS CCA 72 bp TGGCTGGGAACCCTTTTCTTCCTCTGGCTCAGATACTaGAGTCTGCTCATTTTCTACTTCTTTAGCTTTCTC +
Preference number: 6 (lower is better)
Translates to: WLGTLFFLWLRY*SLLIFYFFSFL
Trigger: GAGAAAGCTAAAGAAGTAGAAAATGAGCAGACTCCAGTATCTGAGCCAGAGGAAGAAAAGGGTTCCCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000217929.2
ENSMUST00000218903.2
ENSMUST00000219166.2
ENSMUST00000219224.2
ENSMUST00000219805.2
ENSMUST00000219900.2
ENSMUST00000219967.2
ENSMUST00000220121.2
CDS CAA 72 bp TGGTGGAGATTTCTGTCCTTTGTGAGGCATCAGAAATaGTTACCATCTCTGTTTTTACCACTGGTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: WWRFLSFVRHQK*LPSLFLPLVAL
Trigger: CAGAGCCACCAGTGGTAAAAACAGAGATGGTAACAATTTCTGATGCCTCACAAAGGACAGAAATCTCCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2
CDS CAA 90 bp GGACTTCCTTGGTGGAGATTTCTGTCCTTTGTGAGGCATCAGAAATaGTTACCATCTCTGTTTTTACCACTGGTGGCTCTGAACAACAAA +
Preference number: 6 (lower is better)
Translates to: GLPWWRFLSFVRHQK*LPSLFLPLVALNNK
Trigger: TTTGTTGTTCAGAGCCACCAGTGGTAAAAACAGAGATGGTAACAATTTCTGATGCCTCACAAAGGACAGAAATCTCCACCAAGGAAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000053748.16
ENSMUST00000092645.7
ENSMUST00000218903.2