RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPB41 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028906

Ensembl transcript IDs: ENSMUST00000030739.11, ENSMUST00000054917.12, ENSMUST00000084253.10, ENSMUST00000105970.8, ENSMUST00000105972.8, ENSMUST00000105974.8, ENSMUST00000105975.8, ENSMUST00000105981.9, ENSMUST00000135579.8, ENSMUST00000137846.8, ENSMUST00000141291.3, ENSMUST00000146021.8, ENSMUST00000146443.8, ENSMUST00000155990.8, ENSMUST00000212761.2

Found 1251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCGTCCTCAGGCCTGAGGCAGAGGTCGGAGAATGCACCTCTTCCCTaGGCGTCCCTTACCCCCTTACCATGCCAGGTGGGAGGGGCCCAG +
Preference number: 1 (lower is better)
Translates to: ASSGLRQRSENAPLP*ASLTPLPCQVGGAQ
Trigger: CTGGGCCCCTCCCACCTGGCATGGTAAGGGGGTAAGGGACGCTCAGGGAAGAGGTGCATTCTCCGACCTCTGCCTCAGGCCTGAGGACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 90 bp GTGTGGGAGTGGCACATGCACCTGAGTGCCGCGCTGGCAGAGGCTTaGGGCGCGGCATCCCTCCTGGAGCTGGAGTTACAGGCAGGTATG +
Preference number: 1 (lower is better)
Translates to: VWEWHMHLSAALAEA*GAASLLELELQAGM
Trigger: CATACCTGCCTGTAACTCCAGCTCCAGGAGGGATGCCGCGCCTCAAGCCTCTGCCAGCGCGGCACTCAGGTGCATGTGCCACTCCCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR GCA 90 bp CAGCTCCCAGTGGGCGTCCTCAGGCCTGAGGCAGAGGTCGGAGAATaGACCTCTTCCCTGAGCGTCCCTTACCCCCTTACCATGCCAGGT +
Preference number: 1 (lower is better)
Translates to: QLPVGVLRPEAEVGE*TSSLSVPYPLTMPG
Trigger: ACCTGGCATGGTAAGGGGGTAAGGGACGCTCAGGGAAGAGGTGCATTCTCCGACCTCTGCCTCAGGCCTGAGGACGCCCACTGGGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 90 bp GAGTTCAGGTACCCCAGGTCTGAGGTCCTGATGGGGATGGCACGATaGCCAGTGGGCAGGCTCCTCCTGCTCCTCCTCTTCAGAGCTGGT +
Preference number: 1 (lower is better)
Translates to: EFRYPRSEVLMGMAR*PVGRLLLLLLFRAG
Trigger: ACCAGCTCTGAAGAGGAGGAGCAGGAGGAGCCTGCCCACTGGGCATCGTGCCATCCCCATCAGGACCTCAGACCTGGGGTACCTGAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 90 bp GTGGGCAGGCTCCTCCTGCTCCTCCTCTTCAGAGCTGGTGTAGCTTaGGCCCATGCTAATCCAACCCCTACAGCCCAGCCTTCTCTGGCT +
Preference number: 1 (lower is better)
Translates to: VGRLLLLLLFRAGVA*AHANPTPTAQPSLA
Trigger: AGCCAGAGAAGGCTGGGCTGTAGGGGTTGGATTAGCATGGGCTCAAGCTACACCAGCTCTGAAGAGGAGGAGCAGGAGGAGCCTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 90 bp TTTTCAATTATGCACATGTGTGTGGGAGTGGCACATGCACCTGAGTaGCGCGCTGGCAGAGGCTTGAGGCGCGGCATCCCTCCTGGAGCT +
Preference number: 1 (lower is better)
Translates to: FSIMHMCVGVAHAPE*RAGRGLRRGIPPGA
Trigger: AGCTCCAGGAGGGATGCCGCGCCTCAAGCCTCTGCCAGCGCGGCACTCAGGTGCATGTGCCACTCCCACACACATGTGCATAATTGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 90 bp GGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTaGGGAGGCGAAGGCCACAGATGCATTCGAATGTTCACAGTATCA +
Preference number: 1 (lower is better)
Translates to: GALGKAAVSKEGQGS*GGEGHRCIRMFTVS
Trigger: TGATACTGTGAACATTCGAATGCATCTGTGGCCTTCGCCTCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 90 bp ACAGCCCAGCCTTCTCTGGCTCAGTTCCAGTCTGCAATTCACTTCTaGGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCC +
Preference number: 1 (lower is better)
Translates to: TAQPSLAQFQSAIHF*EWNPSPFLSHLGSP
Trigger: GGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAATTGCAGACTGGAACTGAGCCAGAGAAGGCTGGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTaGCCTGCCCGACAGTCACTGGTGTATGAAGTTTTTGTGTCATCC +
Preference number: 1 (lower is better)
Translates to: PAVGGHVSGVCDQGA*PARQSLVYEVFVSS
Trigger: GGATGACACAAAAACTTCATACACCAGTGACTGTCGGGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 90 bp GCCACATCTGTCACTACGAAAGGCGCAGACAGCAGGCCCAGTTACTaGCTATCTCACCTAGGGGGTTTTCGGTTGGACTCTGCCGGCATA +
Preference number: 1 (lower is better)
Translates to: ATSVTTKGADSRPSY*LSHLGGFRLDSAGI
Trigger: TATGCCGGCAGAGTCCAACCGAAAACCCCCTAGGTGAGATAGGCAGTAACTGGGCCTGCTGTCTGCGCCTTTCGTAGTGACAGATGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 90 bp GCTGTGGCAGAGCTGAGCAGTTGTGAGAAGCCTGACATCTTACTGTaGCACTCCTCAGAGAAGCTGTGCCAACCACACATCTACCTGACG +
Preference number: 1 (lower is better)
Translates to: AVAELSSCEKPDILL*HSSEKLCQPHIYLT
Trigger: CGTCAGGTAGATGTGTGGTTGGCACAGCTTCTCTGAGGAGTGGCACAGTAAGATGTCAGGCTTCTCACAACTGCTCAGCTCTGCCACAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 90 bp GTGCCCAGTTACTGGAATGCCCATGATACCGAGAATGGAGTGAAGTaGGGGAGAGAAAGAGATGCCGTCTGCAGCTTCTTGTATTGGCAG +
Preference number: 1 (lower is better)
Translates to: VPSYWNAHDTENGVK*GRERDAVCSFLYWQ
Trigger: CTGCCAATACAAGAAGCTGCAGACGGCATCTCTTTCTCTCCCCCACTTCACTCCATTCTCGGTATCATGGGCATTCCAGTAACTGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR TCA 90 bp TTCAGCCCCCAGCCACGGCTGACAGTGAGCCTCTGTCAAGCCTCATaGAGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAG +
Preference number: 1 (lower is better)
Translates to: FSPQPRLTVSLCQAS*SSFQPRIRILLIFQ
Trigger: CTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCTTCATGAGGCTTGACAGAGGCTCACTGTCAGCCGTGGCTGGGGGCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 90 bp GTTTCCAAGGAGGGACAGGGCAGCTGGGGAGGCGAAGGCCACAGATaGATTCGAATGTTCACAGTATCAGCTCTATGGAAAGCAATTGAT +
Preference number: 1 (lower is better)
Translates to: VSKEGQGSWGGEGHR*IRMFTVSALWKAID
Trigger: ATCAATTGCTTTCCATAGAGCTGATACTGTGAACATTCGAATGCATCTGTGGCCTTCGCCTCCCCAGCTGCCCTGTCCCTCCTTGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR CCA 90 bp GGACCTGCCATCAAGGAAAAACTGGGTAAAGTGGTGCCCAGTTACTaGAATGCCCATGATACCGAGAATGGAGTGAAGTGGGGGAGAGAA +
Preference number: 1 (lower is better)
Translates to: GPAIKEKLGKVVPSY*NAHDTENGVKWGRE
Trigger: TTCTCTCCCCCACTTCACTCCATTCTCGGTATCATGGGCATTCCAGTAACTGGGCACCACTTTACCCAGTTTTTCCTTGATGGCAGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR TCA 90 bp GAGAAAGAGATGCCGTCTGCAGCTTCTTGTATTGGCAGCATTAACTaGAGCCCACCCAGGGCTGGAACAGCTGATGTTTGTCCTCTGATA +
Preference number: 1 (lower is better)
Translates to: EKEMPSAASCIGSIN*SPPRAGTADVCPLI
Trigger: TATCAGAGGACAAACATCAGCTGTTCCAGCCCTGGGTGGGCTTCAGTTAATGCTGCCAATACAAGAAGCTGCAGACGGCATCTCTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR TCA 90 bp AAGTGGTGCCCAGTTACTGGAATGCCCATGATACCGAGAATGGAGTaGAGTGGGGGAGAGAAAGAGATGCCGTCTGCAGCTTCTTGTATT +
Preference number: 1 (lower is better)
Translates to: KWCPVTGMPMIPRME*SGGEKEMPSAASCI
Trigger: AATACAAGAAGCTGCAGACGGCATCTCTTTCTCTCCCCCACTTCACTCCATTCTCGGTATCATGGGCATTCCAGTAACTGGGCACCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 90 bp TCTGTGGTGTGGAACAGTCTTCAAAGTGTGAAGTCTGCTGCAGGCTaGCTTCTTTATCACATGCTGGCTTCTCTTGGATTGGGACAGGTG +
Preference number: 1 (lower is better)
Translates to: SVVWNSLQSVKSAAG*LLYHMLASLGLGQV
Trigger: CACCTGTCCCAATCCAAGAGAAGCCAGCATGTGATAAAGAAGCCAGCCTGCAGCAGACTTCACACTTTGAAGACTGTTCCACACCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 90 bp AGTGTAATCTGGTCTGGCTTCAACTGGCTCTCCTGCCTCAGTTCCTaGCCAGTTCTGCACAACCACATCCAACTCAAAGAAACTACAATC +
Preference number: 1 (lower is better)
Translates to: SVIWSGFNWLSCLSS*PVLHNHIQLKETTI
Trigger: GATTGTAGTTTCTTTGAGTTGGATGTGGTTGTGCAGAACTGGTCAGGAACTGAGGCAGGAGAGCCAGTTGAAGCCAGACCAGATTACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR GCA 90 bp TTGGTTTTCTGTGGTGTGGAACAGTCTTCAAAGTGTGAAGTCTGCTaGAGGCTGGCTTCTTTATCACATGCTGGCTTCTCTTGGATTGGG +
Preference number: 1 (lower is better)
Translates to: LVFCGVEQSSKCEVC*RLASLSHAGFSWIG
Trigger: CCCAATCCAAGAGAAGCCAGCATGTGATAAAGAAGCCAGCCTGCAGCAGACTTCACACTTTGAAGACTGTTCCACACCACAGAAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 90 bp GCTCAATGGAAAATCACTTCCTTTAGAAAGGGTTCTTTTCAATTATaGACATGTGTGTGGGAGTGGCACATGCACCTGAGTGCCGCGCTG +
Preference number: 1 (lower is better)
Translates to: AQWKITSFRKGSFQL*TCVWEWHMHLSAAL
Trigger: CAGCGCGGCACTCAGGTGCATGTGCCACTCCCACACACATGTGCATAATTGAAAAGAACCCTTTCTAAAGGAAGTGATTTTCCATTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 90 bp TTCTCTTTCTCTTTTGAAACATGGTCTTCAGAGTGTAATCTGGTCTaGCTTCAACTGGCTCTCCTGCCTCAGTTCCTGACCAGTTCTGCA +
Preference number: 1 (lower is better)
Translates to: FSFSFETWSSECNLV*LQLALLPQFLTSSA
Trigger: TGCAGAACTGGTCAGGAACTGAGGCAGGAGAGCCAGTTGAAGCCAGACCAGATTACACTCTGAAGACCATGTTTCAAAAGAGAAAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR TCA 90 bp ACAGAGAAGAACAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTaGTTACACAGCCTGGAATCCCTGACTGAAATGGTTATGATTACC +
Preference number: 1 (lower is better)
Translates to: TEKNKKGKHSPTRPQ*LHSLESLTEMVMIT
Trigger: GGTAATCATAACCATTTCAGTCAGGGATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTGTTCTTCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
3UTR TCA 90 bp GATCTCAAGTTAATCTGTACTCCAGGACTTTTAAAGGTAGGTGTCTaGAATTTTCTACCCTGGATAGAGGCCACGGGACACCAGCACCAT +
Preference number: 1 (lower is better)
Translates to: DLKLICTPGLLKVGV*NFLPWIEATGHQHH
Trigger: ATGGTGCTGGTGTCCCGTGGCCTCTATCCAGGGTAGAAAATTTCAGACACCTACCTTTAAAAGTCCTGGAGTACAGATTAACTTGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 90 bp GGCGAAGGCCACAGATGCATTCGAATGTTCACAGTATCAGCTCTATaGAAAGCAATTGATTTCTTTGACCTAAAGAAGCTCCAAACAGAG +
Preference number: 1 (lower is better)
Translates to: GEGHRCIRMFTVSAL*KAIDFFDLKKLQTE
Trigger: CTCTGTTTGGAGCTTCTTTAGGTCAAAGAAATCAATTGCTTTCCATAGAGCTGATACTGTGAACATTCGAATGCATCTGTGGCCTTCGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR CCA 90 bp TCTATGCAACCAACTAGGCAACACAGGCGTGCTCTAGGTGCTCAATaGAAAATCACTTCCTTTAGAAAGGGTTCTTTTCAATTATGCACA +
Preference number: 1 (lower is better)
Translates to: SMQPTRQHRRALGAQ*KITSFRKGSFQLCT
Trigger: TGTGCATAATTGAAAAGAACCCTTTCTAAAGGAAGTGATTTTCCATTGAGCACCTAGAGCACGCCTGTGTTGCCTAGTTGGTTGCATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR TCA 90 bp ACTGAACATCATTACTTCCTGAAACATGGTGCAGAGTTGTTCTCATaGGGTAGATTTGTCTGTTTGAATGTAGGTGGAAATATGGGCACC +
Preference number: 1 (lower is better)
Translates to: TEHHYFLKHGAELFS*GRFVCLNVGGNMGT
Trigger: GGTGCCCATATTTCCACCTACATTCAAACAGACAAATCTACCTCATGAGAACAACTCTGCACCATGTTTCAGGAAGTAATGATGTTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR GCA 90 bp AAACAAAATGAATTCTCTATGCATGAAAAGACAGCATTTAACCTCTaGGTGATTCTTCTCCACACCAGGCCGAATAAAGTTGCCTATTCC +
Preference number: 1 (lower is better)
Translates to: KQNEFSMHEKTAFNL*VILLHTRPNKVAYS
Trigger: GGAATAGGCAACTTTATTCGGCCTGGTGTGGAGAAGAATCACGCAGAGGTTAAATGCTGTCTTTTCATGCATAGAGAATTCATTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR TCA 90 bp TTGTTAGCAAAGATCTCTGAAGATCCTCGCTACACTTCAGAACATTaGACAGTACCATTGGCTCACACTAAACTTTTAATGGATTTGAAA +
Preference number: 1 (lower is better)
Translates to: LLAKISEDPRYTSEH*TVPLAHTKLLMDLK
Trigger: TTTCAAATCCATTAAAAGTTTAGTGTGAGCCAATGGTACTGTTCAATGTTCTGAAGTGTAGCGAGGATCTTCAGAGATCTTTGCTAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR TCA 90 bp ACACGTACAACCAGTCTTGGTAATACATTCCGGACTGAAAATAGTTaGTCAATAGCTATGGTAAAGGAAAACCAAACCAAATTACAAGGT +
Preference number: 1 (lower is better)
Translates to: TRTTSLGNTFRTENS*SIAMVKENQTKLQG
Trigger: ACCTTGTAATTTGGTTTGGTTTTCCTTTACCATAGCTATTGATCAACTATTTTCAGTCCGGAATGTATTACCAAGACTGGTTGTACGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCTGGGACAGGTGGGGGTaGGGCAGGACAGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSWDRWG*GRTVPE
Trigger: CTCAGGGACTGTCCTGCCCCACCCCCACCTGTCCCA...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGACCTTACCATGCCAGGTaGGAGGGGCCCAGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGPYHAR*EGPRLR
Trigger: CCTCAGCCTGGGCCCCTCCCACCTGGCATGGTAAGG...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCCAGAGGCCCTGTTTGTaGGGTCGGGGGTTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSQRPCL*GRGLGR
Trigger: CCTCCCCAACCCCCGACCCCACAAACAGGGCCTCTG...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCCAGAGGCCCTGTTTGTaGGGTCGGGGGTTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSQRPCL*GRGLGR
Trigger: CCTCCCCAACCCCCGACCCCACAAACAGGGCCTCTG...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR CAA 90 bp TGTGTGGGAGTGGCACATGCACCTGAGTGCCGCGCTGGCAGAGGCTaGAGGCGCGGCATCCCTCCTGGAGCTGGAGTTACAGGCAGGTAT +
Preference number: 2 (lower is better)
Translates to: CVGVAHAPECRAGRG*RRGIPPGAGVTGRY
Trigger: ATACCTGCCTGTAACTCCAGCTCCAGGAGGGATGCCGCGCCTCAAGCCTCTGCCAGCGCGGCACTCAGGTGCATGTGCCACTCCCACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR TCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGAGAGGAGAGGCTAGGCTaGGAGGTTACCAACCACCCC +
Preference number: 2 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGEERLG*EVTNHP
Trigger: GGGGTGGTTGGTAACCTCTCAGCCTAGCCTCTCCTC...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGATGTTTCTGGGGTCTGTaGCCAGGGCGCTTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGCFWGL*PGRLPC
Trigger: GCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACA...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTGTTTCTGGGGTCTGTaGCCAGGGCGCTTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSCFWGL*PGRLPC
Trigger: GCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCAGCTCACTCACACCCTaGCCAGGGATGGCCACCAGG +
Preference number: 2 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSSSLTP*PGMATR
Trigger: CCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCT...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCAGCTCACTCACACCCTaGCCAGGGATGGCCACCAGG +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSSSLTP*PGMATR
Trigger: CCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCT...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCCTTACCCCCTTACCATaGCAGGTGGGAGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSLTPLP*QVGGAQ
Trigger: CTGGGCCCCTCCCACCTGGCATGGTAAGGGGGTAAG...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGATTGGATTGGGACAGGTaGGGGTGGGGCAGGACAGTC +
Preference number: 2 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGLDWDR*GWGRTV
Trigger: GACTGTCCTGCCCCACCCCCACCTGTCCCAATCCAA...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCTTGGATTGGGACAGGTaGGGGTGGGGCAGGACAGTC +
Preference number: 2 (lower is better)
Translates to: PAVGGHVSGVCDQGACPALDWDR*GWGRTV
Trigger: GACTGTCCTGCCCCACCCCCACCTGTCCCAATCCAA...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCTGGCTTCTCTTGGATTaGGACAGGTGGGGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: PAVGGHVSGVCDQGACPAWLLLD*DRWGWG
Trigger: GCCCCACCCCCACCTGTCCCAATCCAAGAGAAGCCA...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGATGGCTTCTCTTGGATTaGGACAGGTGGGGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGWLLLD*DRWGWG
Trigger: GCCCCACCCCCACCTGTCCCAATCCAAGAGAAGCCA...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCGGCCGGAGGCTGCCGTaGCTTCCCACTTTGCTCTTG +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSGRRLP*LPTLLL
Trigger: CAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCC...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCGAGGAGAGGCTAGGCTaGGAGGTTACCAACCACCCC +
Preference number: 2 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSEERLG*EVTNHP
Trigger: GGGGTGGTTGGTAACCTCTCAGCCTAGCCTCTCCTC...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCGAGGAGAGGCTAGGCTaGGAGGTTACCAACCACCCC +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSEERLG*EVTNHP
Trigger: GGGGTGGTTGGTAACCTCTCAGCCTAGCCTCTCCTC...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGAGAGGAGAGGCTAGGCTaGGAGGTTACCAACCACCCC +
Preference number: 2 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGEERLG*EVTNHP
Trigger: GGGGTGGTTGGTAACCTCTCAGCCTAGCCTCTCCTC...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTGGGCAGGCTCCTCCTaGTCCTCCTCTTCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSWAGSS*SSSSEL
Trigger: CAGCTCTGAAGAGGAGGAGCAGGAGGAGCCTGCCCA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGTGGGACAGGTGGGGGTaGGGCAGGACAGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: GGPTELALSSNSWQGLWKWDRWG*GRTVPE
Trigger: CTCAGGGACTGTCCTGCCCCACCCCCACCTGTCCCA...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTTGGATTGGGACAGGTaGGGGTGGGGCAGGACAGTC +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSLDWDR*GWGRTV
Trigger: GACTGTCCTGCCCCACCCCCACCTGTCCCAATCCAA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGATTGGATTGGGACAGGTaGGGGTGGGGCAGGACAGTC +
Preference number: 2 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGLDWDR*GWGRTV
Trigger: GACTGTCCTGCCCCACCCCCACCTGTCCCAATCCAA...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGATGGCTTCTCTTGGATTaGGACAGGTGGGGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGWLLLD*DRWGWG
Trigger: GCCCCACCCCCACCTGTCCCAATCCAAGAGAAGCCA...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTCTGGTCTCCTGAGATaGAAGCTGGGGAGCCCTCGG +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSSGLLR*KLGSPR
Trigger: CCGAGGGCTCCCCAGCTTCCATCTCAGGAGACCAGA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGATCTGGTCTCCTGAGATaGAAGCTGGGGAGCCCTCGG +
Preference number: 2 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGSGLLR*KLGSPR
Trigger: CCGAGGGCTCCCCAGCTTCCATCTCAGGAGACCAGA...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGCCTTACCATGCCAGGTaGGAGGGGCCCAGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEPYHAR*EGPRLR
Trigger: CCTCAGCCTGGGCCCCTCCCACCTGGCATGGTAAGG...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGAGCTCACTCACACCCTaGCCAGGGATGGCCACCAGG +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAESSLTP*PGMATR
Trigger: CCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCT...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGCCAGGTCTGAGGTCCTaGTGGGGATGGCACGATGCC +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEPGLRS*WGWHDA
Trigger: GGCATCGTGCCATCCCCATCAGGACCTCAGACCTGG...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGCAGGTACCCCAGGTCTaGGGTCCTGATGGGGATGGC +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEQVPQV*GPDGDG
Trigger: GCCATCCCCATCAGGACCTCAGACCTGGGGTACCTG...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCGCAGAGGTCGGAGAATaGACCTCTTCCCTGAGCGTC +
Preference number: 2 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSAEVGE*TSSLSV
Trigger: GACGCTCAGGGAAGAGGTGCATTCTCCGACCTCTGC...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTGGGACAGGTGGGGGTaGGGCAGGACAGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQWDRWG*GRTVPE
Trigger: CTCAGGGACTGTCCTGCCCCACCCCCACCTGTCCCA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGTGGCTTCTCTTGGATTaGGACAGGTGGGGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAWLLLD*DRWGWG
Trigger: GCCCCACCCCCACCTGTCCCAATCCAAGAGAAGCCA...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGACATGCTGGCTTCTCTTaGATTGGGACAGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGHAGFS*IGTGGG
Trigger: ACCCCCACCTGTCCCAATCCAAGAGAAGCCAGCATG...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCCATGCTGGCTTCTCTTaGATTGGGACAGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: PAVGGHVSGVCDQGACPAHAGFS*IGTGGG
Trigger: ACCCCCACCTGTCCCAATCCAAGAGAAGCCAGCATG...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCATCCTGGAGAAGTCTGTaGATCCTGTCAGGGTCAGCG +
Preference number: 2 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSSWRSL*ILSGSA
Trigger: CGCTGACCCTGACAGGATCCACAGACTTCTCCAGGA...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGAAGCTGGCAGGGTCTCTaGAAGGTCCTGGAGAAGTCT +
Preference number: 2 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGSWQGL*KVLEKS
Trigger: AGACTTCTCCAGGACCTTCCAGAGACCCTGCCAGCT...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCAGCTGGCAGGGTCTCTaGAAGGTCCTGGAGAAGTCT +
Preference number: 2 (lower is better)
Translates to: PAVGGHVSGVCDQGACPASWQGL*KVLEKS
Trigger: AGACTTCTCCAGGACCTTCCAGAGACCCTGCCAGCT...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCACTGTCCTCTAACAGCTaGCAGGGTCTCTGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSLSSNS*QGLWKV
Trigger: GACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAG...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGACTGTCCTCTAACAGCTaGCAGGGTCTCTGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGLSSNS*QGLWKV
Trigger: GACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAG...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTCCTTACCATGCCAGGTaGGAGGGGCCCAGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATPYHAR*EGPRLR
Trigger: CCTCAGCCTGGGCCCCTCCCACCTGGCATGGTAAGG...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGCCTTACCATGCCAGGTaGGAGGGGCCCAGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQPYHAR*EGPRLR
Trigger: CCTCAGCCTGGGCCCCTCCCACCTGGCATGGTAAGG...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTCCTCAGGCACTGGGTaGGGAGTAGCAGAGCTCACT +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSSSGTG*GVAELT
Trigger: AGTGAGCTCTGCTACTCCCCACCCAGTGCCTGAGGA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGGGCCGGAGGCTGCCGTaGCTTCCCACTTTGCTCTTG +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEGRRLP*LPTLLL
Trigger: CAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCC...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGGAGGAGAGGCTAGGCTaGGAGGTTACCAACCACCCC +
Preference number: 2 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWEERLG*EVTNHP
Trigger: GGGGTGGTTGGTAACCTCTCAGCCTAGCCTCTCCTC...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGAGGAGAGGCTAGGCTaGGAGGTTACCAACCACCCC +
Preference number: 2 (lower is better)
Translates to: GGPTELALSSNSWQGLWKEERLG*EVTNHP
Trigger: GGGGTGGTTGGTAACCTCTCAGCCTAGCCTCTCCTC...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTGTTTCTGGGGTCTGTaGCCAGGGCGCTTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATCFWGL*PGRLPC
Trigger: GCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCCTTAACAGGATCCACTaGGGTAAAGGGGCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSLNRIH*GKGASP
Trigger: GGGAGAGGCCCCTTTACCTCAGTGGATCCTGTTAAG...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGACTTAACAGGATCCACTaGGGTAAAGGGGCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGLNRIH*GKGASP
Trigger: GGGAGAGGCCCCTTTACCTCAGTGGATCCTGTTAAG...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGAAATGCACCTCTTCCCTaGGCGTCCCTTACCCCCTTA +
Preference number: 2 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGNAPLP*ASLTPL
Trigger: TAAGGGGGTAAGGGACGCTCAGGGAAGAGGTGCATT...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGCCAGGTCTGAGGTCCTaGTGGGGATGGCACGATGCC +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQPGLRS*WGWHDA
Trigger: GGCATCGTGCCATCCCCATCAGGACCTCAGACCTGG...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCAGCCCTCGGCAAAGCTaGTGTTTCCAAGGAGGGACA +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSSPRQS*CFQGGT
Trigger: TGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCT...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTGGGCAGGCTCCTCCTaGTCCTCCTCTTCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEWAGSS*SSSSEL
Trigger: CAGCTCTGAAGAGGAGGAGCAGGAGGAGCCTGCCCA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATGGGACAGGTGGGGGTaGGGCAGGACAGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTWDRWG*GRTVPE
Trigger: CTCAGGGACTGTCCTGCCCCACCCCCACCTGTCCCA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTTGGATTGGGACAGGTaGGGGTGGGGCAGGACAGTC +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAELDWDR*GWGRTV
Trigger: GACTGTCCTGCCCCACCCCCACCTGTCCCAATCCAA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGTTGGATTGGGACAGGTaGGGGTGGGGCAGGACAGTC +
Preference number: 2 (lower is better)
Translates to: GGPTELALSSNSWQGLWKLDWDR*GWGRTV
Trigger: GACTGTCCTGCCCCACCCCCACCTGTCCCAATCCAA...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTGGCTTCTCTTGGATTaGGACAGGTGGGGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEWLLLD*DRWGWG
Trigger: GCCCCACCCCCACCTGTCCCAATCCAAGAGAAGCCA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGACATGCTGGCTTCTCTTaGATTGGGACAGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGHAGFS*IGTGGG
Trigger: ACCCCCACCTGTCCCAATCCAAGAGAAGCCAGCATG...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCCATGCTGGCTTCTCTTaGATTGGGACAGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSHAGFS*IGTGGG
Trigger: ACCCCCACCTGTCCCAATCCAAGAGAAGCCAGCATG...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCTCCTGGAGAAGTCTGTaGATCCTGTCAGGGTCAGCG +
Preference number: 2 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSSWRSL*ILSGSA
Trigger: CGCTGACCCTGACAGGATCCACAGACTTCTCCAGGA...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGAAGCTGGCAGGGTCTCTaGAAGGTCCTGGAGAAGTCT +
Preference number: 2 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGSWQGL*KVLEKS
Trigger: AGACTTCTCCAGGACCTTCCAGAGACCCTGCCAGCT...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCAGCTGGCAGGGTCTCTaGAAGGTCCTGGAGAAGTCT +
Preference number: 2 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSSWQGL*KVLEKS
Trigger: AGACTTCTCCAGGACCTTCCAGAGACCCTGCCAGCT...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGACTGTCCTCTAACAGCTaGCAGGGTCTCTGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGLSSNS*QGLWKV
Trigger: GACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAG...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCCTGTCCTCTAACAGCTaGCAGGGTCTCTGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSLSSNS*QGLWKV
Trigger: GACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAG...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTCTGGTCTCCTGAGATaGAAGCTGGGGAGCCCTCGG +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAESGLLR*KLGSPR
Trigger: CCGAGGGCTCCCCAGCTTCCATCTCAGGAGACCAGA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCCACCCTGACCAGGGATaGCCACCAGGAGATGGAAAT +
Preference number: 2 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSHPDQG*PPGDGN
Trigger: ATTTCCATCTCCTGGTGGCCATCCCTGGTCAGGGTG...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGAGGCTCCTCAGGCACTaGGTGGGGAGTAGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAERLLRH*VGSSRA
Trigger: AGCTCTGCTACTCCCCACCCAGTGCCTGAGGAGCCT...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACACAGAGGCCCTGTTTGTaGGGTCGGGGGTTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTQRPCL*GRGLGR
Trigger: CCTCCCCAACCCCCGACCCCACAAACAGGGCCTCTG...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCAGAGGCCCTGTTTGTaGGGTCGGGGGTTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPQRPCL*GRGLGR
Trigger: CCTCCCCAACCCCCGACCCCACAAACAGGGCCTCTG...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGGCCGGAGGCTGCCGTaGCTTCCCACTTTGCTCTTG +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQGRRLP*LPTLLL
Trigger: CAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCCAGCCCAGCCTTCTCTaGCTCAGTTCCAGTCTGCAA +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSQPSLL*LSSSLQ
Trigger: TTGCAGACTGGAACTGAGCCAGAGAAGGCTGGGCTG...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGAGGAGAGGCTAGGCTaGGAGGTTACCAACCACCCC +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQEERLG*EVTNHP
Trigger: GGGGTGGTTGGTAACCTCTCAGCCTAGCCTCTCCTC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCAGCGTTGAAAATGAGTaGGGAGAGGCTAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: PAVGGHVSGVCDQGACPASVENE*GEARLR
Trigger: TCTCAGCCTAGCCTCTCCTCACTCATTTTCAACGCT...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTTGTTTCTGGGGTCTGTaGCCAGGGCGCTTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPCFWGL*PGRLPC
Trigger: GCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACA...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACACCAGGTCTGAGGTCCTaGTGGGGATGGCACGATGCC +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTPGLRS*WGWHDA
Trigger: GGCATCGTGCCATCCCCATCAGGACCTCAGACCTGG...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGGCAGAGGTCGGAGAATaGACCTCTTCCCTGAGCGTC +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEAEVGE*TSSLSV
Trigger: GACGCTCAGGGAAGAGGTGCATTCTCCGACCTCTGC...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGACCAGGAGATGGAAATaGCCCAGCTCCCAGTGGGCG +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQTRRWK*PSSQWA
Trigger: CGCCCACTGGGAGCTGGGGCATTTCCATCTCCTGGT...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTACCAGGAGATGGAAATaGCCCAGCTCCCAGTGGGCG +
Preference number: 2 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATTRRWK*PSSQWA
Trigger: CGCCCACTGGGAGCTGGGGCATTTCCATCTCCTGGT...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTTCCCACTTTGCTCTTaGTTACTCCCCTTCAGCCCC +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSFPLCS*LLPFSP
Trigger: GGGGCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTGGGCAGGCTCCTCCTaGTCCTCCTCTTCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQWAGSS*SSSSEL
Trigger: CAGCTCTGAAGAGGAGGAGCAGGAGGAGCCTGCCCA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTTGGATTGGGACAGGTaGGGGTGGGGCAGGACAGTC +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQLDWDR*GWGRTV
Trigger: GACTGTCCTGCCCCACCCCCACCTGTCCCAATCCAA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTGGCTTCTCTTGGATTaGGACAGGTGGGGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQWLLLD*DRWGWG
Trigger: GCCCCACCCCCACCTGTCCCAATCCAAGAGAAGCCA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCATGCTGGCTTCTCTTaGATTGGGACAGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAHAGFS*IGTGGG
Trigger: ACCCCCACCTGTCCCAATCCAAGAGAAGCCAGCATG...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGAGCTGGCAGGGTCTCTaGAAGGTCCTGGAGAAGTCT +
Preference number: 2 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRASWQGL*KVLEKS
Trigger: AGACTTCTCCAGGACCTTCCAGAGACCCTGCCAGCT...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTGTCCTCTAACAGCTaGCAGGGTCTCTGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRALSSNS*QGLWKV
Trigger: GACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAG...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCGAGGTCCTACTGAGCTaGCTCTGTCCTCTAACAGCT +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSEVLLS*LCPLTA
Trigger: AGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTC...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGAGAGGTCCTACTGAGCTaGCTCTGTCCTCTAACAGCT +
Preference number: 2 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGEVLLS*LCPLTA
Trigger: AGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTC...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCAGCGTTGAAAATGAGTaGGGAGAGGCTAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSSVENE*GEARLR
Trigger: TCTCAGCCTAGCCTCTCCTCACTCATTTTCAACGCT...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATGTTTCTGGGGTCTGTaGCCAGGGCGCTTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISCFWGL*PGRLPC
Trigger: GCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATGTTTCTGGGGTCTGTaGCCAGGGCGCTTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRICFWGL*PGRLPC
Trigger: GCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGCTTAACAGGATCCACTaGGGTAAAGGGGCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAELNRIH*GKGASP
Trigger: GGGAGAGGCCCCTTTACCTCAGTGGATCCTGTTAAG...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGAATGCACCTCTTCCCTaGGCGTCCCTTACCCCCTTA +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAENAPLP*ASLTPL
Trigger: TAAGGGGGTAAGGGACGCTCAGGGAAGAGGTGCATT...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAAGCTCACTCACACCCTaGCCAGGGATGGCCACCAGG +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRISSLTP*PGMATR
Trigger: CCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCT...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGCAAGCTCTCAAAACCTaGCAGGCTCCTCAGGCACTG +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEQALKT*QAPQAL
Trigger: CAGTGCCTGAGGAGCCTGTCAGGTTTTGAGAGCTTG...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCCTCTGTCAAGCCTCATaGAGCTCATTCCAGCCTAGA +
Preference number: 2 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSLCQAS*SSFQPR
Trigger: TCTAGGCTGGAATGAGCTTCATGAGGCTTGACAGAG...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCCTCTGTCAAGCCTCATaGAGCTCATTCCAGCCTAGA +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSLCQAS*SSFQPR
Trigger: TCTAGGCTGGAATGAGCTTCATGAGGCTTGACAGAG...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATACAGGTACCCCAGGTCTaGGGTCCTGATGGGGATGGC +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIQVPQV*GPDGDG
Trigger: GCCATCCCCATCAGGACCTCAGACCTGGGGTACCTG...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATACTTACCCCCTTACCATaGCAGGTGGGAGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRILTPLP*QVGGAQ
Trigger: CTGGGCCCCTCCCACCTGGCATGGTAAGGGGGTAAG...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTACCAGGAGATGGAAATaGCCCAGCTCCCAGTGGGCG +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPTRRWK*PSSQWA
Trigger: CGCCCACTGGGAGCTGGGGCATTTCCATCTCCTGGT...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAACCAGGAGATGGAAATaGCCCAGCTCCCAGTGGGCG +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTTRRWK*PSSQWA
Trigger: CGCCCACTGGGAGCTGGGGCATTTCCATCTCCTGGT...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATGGGCAGGCTCCTCCTaGTCCTCCTCTTCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTWAGSS*SSSSEL
Trigger: CAGCTCTGAAGAGGAGGAGCAGGAGGAGCCTGCCCA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATGGCTTCTCTTGGATTaGGACAGGTGGGGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTWLLLD*DRWGWG
Trigger: GCCCCACCCCCACCTGTCCCAATCCAAGAGAAGCCA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTTGGCTTCTCTTGGATTaGGACAGGTGGGGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPWLLLD*DRWGWG
Trigger: GCCCCACCCCCACCTGTCCCAATCCAAGAGAAGCCA...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGCATGCTGGCTTCTCTTaGATTGGGACAGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: GGPTELALSSNSWQGLWKHAGFS*IGTGGG
Trigger: ACCCCCACCTGTCCCAATCCAAGAGAAGCCAGCATG...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGTCCTGGAGAAGTCTGTaGATCCTGTCAGGGTCAGCG +
Preference number: 2 (lower is better)
Translates to: GGPTELALSSNSWQGLWKSWRSL*ILSGSA
Trigger: CGCTGACCCTGACAGGATCCACAGACTTCTCCAGGA...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTAGGCTCCTCAGGCACTaGGTGGGGAGTAGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPRLLRH*VGSSRA
Trigger: AGCTCTGCTACTCCCCACCCAGTGCCTGAGGAGCCT...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAAGGCTCCTCAGGCACTaGGTGGGGAGTAGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTRLLRH*VGSSRA
Trigger: AGCTCTGCTACTCCCCACCCAGTGCCTGAGGAGCCT...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGCAGCCCAGCCTTCTCTaGCTCAGTTCCAGTCTGCAA +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEQPSLL*LSSSLQ
Trigger: TTGCAGACTGGAACTGAGCCAGAGAAGGCTGGGCTG...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGGAGGGGGAGGAGGCTaGAGGGACATCAGAATTCTG +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQGGGGG*RDIRIL
Trigger: CAGAATTCTGATGTCCCTCCAGCCTCCTCCCCCTCC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAGAGGAGAGGCTAGGCTaGGAGGTTACCAACCACCCC +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIEERLG*EVTNHP
Trigger: GGGGTGGTTGGTAACCTCTCAGCCTAGCCTCTCCTC...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGAGCGTTGAAAATGAGTaGGGAGAGGCTAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRASVENE*GEARLR
Trigger: TCTCAGCCTAGCCTCTCCTCACTCATTTTCAACGCT...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGAATGCACCTCTTCCCTaGGCGTCCCTTACCCCCTTA +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQNAPLP*ASLTPL
Trigger: TAAGGGGGTAAGGGACGCTCAGGGAAGAGGTGCATT...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTCTGCAATTCACTTCTaGGAATGGAACCCAAGCCCA +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSSAIHF*EWNPSP
Trigger: TGGGCTTGGGTTCCATTCTCAGAAGTGAATTGCAGA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTAGCCCTCGGCAAAGCTaGTGTTTCCAAGGAGGGACA +
Preference number: 2 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATSPRQS*CFQGGT
Trigger: TGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCT...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGAGCCCTCGGCAAAGCTaGTGTTTCCAAGGAGGGACA +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQSPRQS*CFQGGT
Trigger: TGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCT...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTGCAGAGGTCGGAGAATaGACCTCTTCCCTGAGCGTC +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPAEVGE*TSSLSV
Trigger: GACGCTCAGGGAAGAGGTGCATTCTCCGACCTCTGC...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTTCCCACTTTGCTCTTaGTTACTCCCCTTCAGCCCC +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEFPLCS*LLPFSP
Trigger: GGGGCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATGGGCAGGCTCCTCCTaGTCCTCCTCTTCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISWAGSS*SSSSEL
Trigger: CAGCTCTGAAGAGGAGGAGCAGGAGGAGCCTGCCCA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTATCCCAGGATCTGTTaGCAGAGCCAGCAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQYPRIC*QSQQRR
Trigger: CCTCCTCTGCTGGCTCTGGCAACAGATCCTGGGATA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATGGCTTCTCTTGGATTaGGACAGGTGGGGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIWLLLD*DRWGWG
Trigger: GCCCCACCCCCACCTGTCCCAATCCAAGAGAAGCCA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGCATGCTGGCTTCTCTTaGATTGGGACAGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQHAGFS*IGTGGG
Trigger: ACCCCCACCTGTCCCAATCCAAGAGAAGCCAGCATG...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCAAGTCTGCTGCAGGCTaGCTTCTTTATCACATGCTG +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSKSAAG*LLYHML
Trigger: CAGCATGTGATAAAGAAGCCAGCCTGCAGCAGACTT...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTCCTGGAGAAGTCTGTaGATCCTGTCAGGGTCAGCG +
Preference number: 2 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATSWRSL*ILSGSA
Trigger: CGCTGACCCTGACAGGATCCACAGACTTCTCCAGGA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTCCTGGAGAAGTCTGTaGATCCTGTCAGGGTCAGCG +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQSWRSL*ILSGSA
Trigger: CGCTGACCCTGACAGGATCCACAGACTTCTCCAGGA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGCTGTCCTCTAACAGCTaGCAGGGTCTCTGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQLSSNS*QGLWKV
Trigger: GACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAG...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGGAGGTCCTACTGAGCTaGCTCTGTCCTCTAACAGCT +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEEVLLS*LCPLTA
Trigger: AGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTC...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATCTGGTCTCCTGAGATaGAAGCTGGGGAGCCCTCGG +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRISGLLR*KLGSPR
Trigger: CCGAGGGCTCCCCAGCTTCCATCTCAGGAGACCAGA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGCACCCTGACCAGGGATaGCCACCAGGAGATGGAAAT +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQHPDQG*PPGDGN
Trigger: ATTTCCATCTCCTGGTGGCCATCCCTGGTCAGGGTG...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATCCTCAGGCACTGGGTaGGGAGTAGCAGAGCTCACT +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTSSGTG*GVAELT
Trigger: AGTGAGCTCTGCTACTCCCCACCCAGTGCCTGAGGA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTTCCTCAGGCACTGGGTaGGGAGTAGCAGAGCTCACT +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPSSGTG*GVAELT
Trigger: AGTGAGCTCTGCTACTCCCCACCCAGTGCCTGAGGA...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAAGGCTCCTCAGGCACTaGGTGGGGAGTAGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISRLLRH*VGSSRA
Trigger: AGCTCTGCTACTCCCCACCCAGTGCCTGAGGAGCCT...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAAGGCTCCTCAGGCACTaGGTGGGGAGTAGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIRLLRH*VGSSRA
Trigger: AGCTCTGCTACTCCCCACCCAGTGCCTGAGGAGCCT...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGCAGCCCAGCCTTCTCTaGCTCAGTTCCAGTCTGCAA +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQQPSLL*LSSSLQ
Trigger: TTGCAGACTGGAACTGAGCCAGAGAAGGCTGGGCTG...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAGGAGGGGGAGGAGGCTaGAGGGACATCAGAATTCTG +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTGGGGG*RDIRIL
Trigger: CAGAATTCTGATGTCCCTCCAGCCTCCTCCCCCTCC...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGAGCGTTGAAAATGAGTaGGGAGAGGCTAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWSVENE*GEARLR
Trigger: TCTCAGCCTAGCCTCTCCTCACTCATTTTCAACGCT...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGAGCGTTGAAAATGAGTaGGGAGAGGCTAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: GGPTELALSSNSWQGLWKSVENE*GEARLR
Trigger: TCTCAGCCTAGCCTCTCCTCACTCATTTTCAACGCT...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGAGCGTTGAAAATGAGTaGGGAGAGGCTAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAESVENE*GEARLR
Trigger: TCTCAGCCTAGCCTCTCCTCACTCATTTTCAACGCT...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTTAACAGGATCCACTaGGGTAAAGGGGCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPLNRIH*GKGASP
Trigger: GGGAGAGGCCCCTTTACCTCAGTGGATCCTGTTAAG...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAAATGCACCTCTTCCCTaGGCGTCCCTTACCCCCTTA +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTNAPLP*ASLTPL
Trigger: TAAGGGGGTAAGGGACGCTCAGGGAAGAGGTGCATT...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTAATGCACCTCTTCCCTaGGCGTCCCTTACCCCCTTA +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPNAPLP*ASLTPL
Trigger: TAAGGGGGTAAGGGACGCTCAGGGAAGAGGTGCATT...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCAAGCTCTCAAAACCTaGCAGGCTCCTCAGGCACTG +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPQALKT*QAPQAL
Trigger: CAGTGCCTGAGGAGCCTGTCAGGTTTTGAGAGCTTG...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACACAAGCTCTCAAAACCTaGCAGGCTCCTCAGGCACTG +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTQALKT*QAPQAL
Trigger: CAGTGCCTGAGGAGCCTGTCAGGTTTTGAGAGCTTG...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGCTCTGTCAAGCCTCATaGAGCTCATTCCAGCCTAGA +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAELCQAS*SSFQPR
Trigger: TCTAGGCTGGAATGAGCTTCATGAGGCTTGACAGAG...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTTCCCACTTTGCTCTTaGTTACTCCCCTTCAGCCCC +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQFPLCS*LLPFSP
Trigger: GGGGCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATATCCCAGGATCTGTTaGCAGAGCCAGCAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTYPRIC*QSQQRR
Trigger: CCTCCTCTGCTGGCTCTGGCAACAGATCCTGGGATA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGAAGTCTGCTGCAGGCTaGCTTCTTTATCACATGCTG +
Preference number: 2 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAKSAAG*LLYHML
Trigger: CAGCATGTGATAAAGAAGCCAGCCTGCAGCAGACTT...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTTCCTGGAGAAGTCTGTaGATCCTGTCAGGGTCAGCG +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPSWRSL*ILSGSA
Trigger: CGCTGACCCTGACAGGATCCACAGACTTCTCCAGGA...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAAGCTGGCAGGGTCTCTaGAAGGTCCTGGAGAAGTCT +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTSWQGL*KVLEKS
Trigger: AGACTTCTCCAGGACCTTCCAGAGACCCTGCCAGCT...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTAGCTGGCAGGGTCTCTaGAAGGTCCTGGAGAAGTCT +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPSWQGL*KVLEKS
Trigger: AGACTTCTCCAGGACCTTCCAGAGACCCTGCCAGCT...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACACACCCTGACCAGGGATaGCCACCAGGAGATGGAAAT +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTHPDQG*PPGDGN
Trigger: ATTTCCATCTCCTGGTGGCCATCCCTGGTCAGGGTG...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCACCCTGACCAGGGATaGCCACCAGGAGATGGAAAT +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPHPDQG*PPGDGN
Trigger: ATTTCCATCTCCTGGTGGCCATCCCTGGTCAGGGTG...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATCCTCAGGCACTGGGTaGGGAGTAGCAGAGCTCACT +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRISSGTG*GVAELT
Trigger: AGTGAGCTCTGCTACTCCCCACCCAGTGCCTGAGGA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGGGCTTGATTGTGGGTaGGTGGCAGAGATCTCATGT +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQGLDCG*VAEISC
Trigger: ACATGAGATCTCTGCCACCCACCCACAATCAAGCCC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAAATGCACCTCTTCCCTaGGCGTCCCTTACCCCCTTA +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRINAPLP*ASLTPL
Trigger: TAAGGGGGTAAGGGACGCTCAGGGAAGAGGTGCATT...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCACAAGCTCTCAAAACCTaGCAGGCTCCTCAGGCACTG +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISQALKT*QAPQAL
Trigger: CAGTGCCTGAGGAGCCTGTCAGGTTTTGAGAGCTTG...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATACAAGCTCTCAAAACCTaGCAGGCTCCTCAGGCACTG +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIQALKT*QAPQAL
Trigger: CAGTGCCTGAGGAGCCTGTCAGGTTTTGAGAGCTTG...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTCTCTGTCAAGCCTCATaGAGCTCATTCCAGCCTAGA +
Preference number: 2 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATLCQAS*SSFQPR
Trigger: TCTAGGCTGGAATGAGCTTCATGAGGCTTGACAGAG...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTCTGCAATTCACTTCTaGGAATGGAACCCAAGCCCA +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAESAIHF*EWNPSP
Trigger: TGGGCTTGGGTTCCATTCTCAGAAGTGAATTGCAGA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGGGCGAAGGCCACAGATaGATTCGAATGTTCACAGTA +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEGEGHR*IRMFTV
Trigger: TACTGTGAACATTCGAATGCATCTGTGGCCTTCGCC...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATTCCCACTTTGCTCTTaGTTACTCCCCTTCAGCCCC +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTFPLCS*LLPFSP
Trigger: GGGGCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATATCCCAGGATCTGTTaGCAGAGCCAGCAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIYPRIC*QSQQRR
Trigger: CCTCCTCTGCTGGCTCTGGCAACAGATCCTGGGATA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCACATGCTGGCTTCTCTTaGATTGGGACAGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISHAGFS*IGTGGG
Trigger: ACCCCCACCTGTCCCAATCCAAGAGAAGCCAGCATG...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGAAGTCTGCTGCAGGCTaGCTTCTTTATCACATGCTG +
Preference number: 2 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWKSAAG*LLYHML
Trigger: CAGCATGTGATAAAGAAGCCAGCCTGCAGCAGACTT...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCGAAGTTGGTTTTCTGTaGTGTGGAACAGTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: PAVGGHVSGVCDQGACPAEVGFL*CGTVFK
Trigger: TTTGAAGACTGTTCCACACCACAGAAAACCAACTTC...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAAGCTGGCAGGGTCTCTaGAAGGTCCTGGAGAAGTCT +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRISWQGL*KVLEKS
Trigger: AGACTTCTCCAGGACCTTCCAGAGACCCTGCCAGCT...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCACTGTCCTCTAACAGCTaGCAGGGTCTCTGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISLSSNS*QGLWKV
Trigger: GACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAG...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTGAGGTCCTACTGAGCTaGCTCTGTCCTCTAACAGCT +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPEVLLS*LCPLTA
Trigger: AGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTC...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAGAGGTCCTACTGAGCTaGCTCTGTCCTCTAACAGCT +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTEVLLS*LCPLTA
Trigger: AGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTC...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCTTTTTCCATGAGTTCTaGTCTCCTGAGATGGAAGCT +
Preference number: 2 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSFFHEF*SPEMEA
Trigger: AGCTTCCATCTCAGGAGACCAGAACTCATGGAAAAA...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATACACCCTGACCAGGGATaGCCACCAGGAGATGGAAAT +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIHPDQG*PPGDGN
Trigger: ATTTCCATCTCCTGGTGGCCATCCCTGGTCAGGGTG...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCACACCCTGACCAGGGATaGCCACCAGGAGATGGAAAT +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISHPDQG*PPGDGN
Trigger: ATTTCCATCTCCTGGTGGCCATCCCTGGTCAGGGTG...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR CAA 90 bp AGTGAAGTGGGGGAGAGAAAGAGATGCCGTCTGCAGCTTCTTGTATaGGCAGCATTAACTGAAGCCCACCCAGGGCTGGAACAGCTGATG +
Preference number: 2 (lower is better)
Translates to: SEVGERKRCRLQLLV*AALTEAHPGLEQLM
Trigger: CATCAGCTGTTCCAGCCCTGGGTGGGCTTCAGTTAATGCTGCCAATACAAGAAGCTGCAGACGGCATCTCTTTCTCTCCCCCACTTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR TCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTAGCGTTGAAAATGAGTaGGGAGAGGCTAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPSVENE*GEARLR
Trigger: TCTCAGCCTAGCCTCTCCTCACTCATTTTCAACGCT...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTCTGCAATTCACTTCTaGGAATGGAACCCAAGCCCA +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQSAIHF*EWNPSP
Trigger: TGGGCTTGGGTTCCATTCTCAGAAGTGAATTGCAGA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGGCGAAGGCCACAGATaGATTCGAATGTTCACAGTA +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQGEGHR*IRMFTV
Trigger: TACTGTGAACATTCGAATGCATCTGTGGCCTTCGCC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATTCCCACTTTGCTCTTaGTTACTCCCCTTCAGCCCC +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISFPLCS*LLPFSP
Trigger: GGGGCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGGGCTCAGTTCCAGTCTaGAATTCACTTCTGAGAATG +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEGSVPV*NSLLRM
Trigger: CATTCTCAGAAGTGAATTGCAGACTGGAACTGAGCC...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTAAGTCTGCTGCAGGCTaGCTTCTTTATCACATGCTG +
Preference number: 2 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATKSAAG*LLYHML
Trigger: CAGCATGTGATAAAGAAGCCAGCCTGCAGCAGACTT...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCGAAGTTGGTTTTCTGTaGTGTGGAACAGTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSEVGFL*CGTVFK
Trigger: TTTGAAGACTGTTCCACACCACAGAAAACCAACTTC...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAGAGGTCCTACTGAGCTaGCTCTGTCCTCTAACAGCT +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISEVLLS*LCPLTA
Trigger: AGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTC...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAGAGGTCCTACTGAGCTaGCTCTGTCCTCTAACAGCT +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIEVLLS*LCPLTA
Trigger: AGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTC...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGCAGAGGCCCTGTTTGTaGGGTCGGGGGTTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERQRPCL*GRGLGR
Trigger: CCTCCCCAACCCCCGACCCCACAAACAGGGCCTCTG...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGGGGACATCAGAATTCTaGTCCAATTTCCAGACAGAG +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEGTSEF*SNFQTE
Trigger: CTCTGTCTGGAAATTGGACCAGAATTCTGATGTCCC...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTATATACAAGGCAAGCTGGTTCCTGGGATCCACAGGTGGCAGGCGGCAAACAATGGTCTGGCTTCAACTaGCTCTCCTGCCTCAGTTCC +
Preference number: 2 (lower is better)
Translates to: LYTRQAGSWDPQVAGGKQWSGFN*LSCLSS
Trigger: GGAACTGAGGCAGGAGAGCCAGTTGAAGCCAGACCA...TTGTTTGCCGCCTGCCACCTGTGGATCCCAGGAACCAGCTTGCCTTGTATATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR TCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAAGCGTTGAAAATGAGTaGGGAGAGGCTAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISSVENE*GEARLR
Trigger: TCTCAGCCTAGCCTCTCCTCACTCATTTTCAACGCT...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAAGCGTTGAAAATGAGTaGGGAGAGGCTAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRISVENE*GEARLR
Trigger: TCTCAGCCTAGCCTCTCCTCACTCATTTTCAACGCT...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTGTTTCTGGGGTCTGTaGCCAGGGCGCTTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERCFWGL*PGRLPC
Trigger: GCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCACTCTGTCAAGCCTCATaGAGCTCATTCCAGCCTAGA +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISLCQAS*SSFQPR
Trigger: TCTAGGCTGGAATGAGCTTCATGAGGCTTGACAGAG...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATACTCTGTCAAGCCTCATaGAGCTCATTCCAGCCTAGA +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRILCQAS*SSFQPR
Trigger: TCTAGGCTGGAATGAGCTTCATGAGGCTTGACAGAG...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGCAGGTACCCCAGGTCTaGGGTCCTGATGGGGATGGC +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERQVPQV*GPDGDG
Trigger: GCCATCCCCATCAGGACCTCAGACCTGGGGTACCTG...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATTACTGTGGTGTGCCTaGGTCACTTTGGGGAAAGTC +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRILLWCA*VTLGKV
Trigger: GACTTTCCCCAAAGTGACTCAGGCACACCACAGTAA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGGCTCAGTTCCAGTCTaGAATTCACTTCTGAGAATG +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQGSVPV*NSLLRM
Trigger: CATTCTCAGAAGTGAATTGCAGACTGGAACTGAGCC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTAAGTCTGCTGCAGGCTaGCTTCTTTATCACATGCTG +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPKSAAG*LLYHML
Trigger: CAGCATGTGATAAAGAAGCCAGCCTGCAGCAGACTT...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGGAAGTTGGTTTTCTGTaGTGTGGAACAGTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAEVGFL*CGTVFK
Trigger: TTTGAAGACTGTTCCACACCACAGAAAACCAACTTC...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAACAGAGGCCCTGTTTGTaGGGTCGGGGGTTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKQRPCL*GRGLGR
Trigger: CCTCCCCAACCCCCGACCCCACAAACAGGGCCTCTG...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGGGACATCAGAATTCTaGTCCAATTTCCAGACAGAG +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQGTSEF*SNFQTE
Trigger: CTCTGTCTGGAAATTGGACCAGAATTCTGATGTCCC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR CAA 90 bp AGACCTTTCAGACCCAAGCATCAGACGTGCTGTCTTTCTGCATCCTaGCAGAGAGCAGGAAGTAACCATGTTTTCCCGTTCACCCCTCTC +
Preference number: 2 (lower is better)
Translates to: RPFRPKHQTCCLSAS*QRAGSNHVFPFTPL
Trigger: GAGAGGGGTGAACGGGAAAACATGGTTACTTCCTGCTCTCTGCAAGGATGCAGAAAGACAGCACGTCTGATGCTTGGGTCTGAAAGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR TCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGATTCTGAGTAGAAAATaGAGTTGGTTTTCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAILSRK*SWFSVV
Trigger: CACCACAGAAAACCAACTTCATTTTCTACTCAGAAT...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATCTGCAATTCACTTCTaGGAATGGAACCCAAGCCCA +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRISAIHF*EWNPSP
Trigger: TGGGCTTGGGTTCCATTCTCAGAAGTGAATTGCAGA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAGGCGAAGGCCACAGATaGATTCGAATGTTCACAGTA +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIGEGHR*IRMFTV
Trigger: TACTGTGAACATTCGAATGCATCTGTGGCCTTCGCC...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGACCAGGAGATGGAAATaGCCCAGCTCCCAGTGGGCG +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERTRRWK*PSSQWA
Trigger: CGCCCACTGGGAGCTGGGGCATTTCCATCTCCTGGT...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAGGCTCAGTTCCAGTCTaGAATTCACTTCTGAGAATG +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTGSVPV*NSLLRM
Trigger: CATTCTCAGAAGTGAATTGCAGACTGGAACTGAGCC...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTGGGCAGGCTCCTCCTaGTCCTCCTCTTCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERWAGSS*SSSSEL
Trigger: CAGCTCTGAAGAGGAGGAGCAGGAGGAGCCTGCCCA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTGGGACAGGTGGGGGTaGGGCAGGACAGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYWDRWG*GRTVPE
Trigger: CTCAGGGACTGTCCTGCCCCACCCCCACCTGTCCCA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTTGGATTGGGACAGGTaGGGGTGGGGCAGGACAGTC +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERLDWDR*GWGRTV
Trigger: GACTGTCCTGCCCCACCCCCACCTGTCCCAATCCAA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAAAGTCTGCTGCAGGCTaGCTTCTTTATCACATGCTG +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISKSAAG*LLYHML
Trigger: CAGCATGTGATAAAGAAGCCAGCCTGCAGCAGACTT...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGGAAGTTGGTTTTCTGTaGTGTGGAACAGTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEEVGFL*CGTVFK
Trigger: TTTGAAGACTGTTCCACACCACAGAAAACCAACTTC...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTTTTTCCATGAGTTCTaGTCTCCTGAGATGGAAGCT +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQFFHEF*SPEMEA
Trigger: AGCTTCCATCTCAGGAGACCAGAACTCATGGAAAAA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCCTTACCATGCCAGGTaGGAGGGGCCCAGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYPYHAR*EGPRLR
Trigger: CCTCAGCCTGGGCCCCTCCCACCTGGCATGGTAAGG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGAGGCTCCTCAGGCACTaGGTGGGGAGTAGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERRLLRH*VGSSRA
Trigger: AGCTCTGCTACTCCCCACCCAGTGCCTGAGGAGCCT...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGATTCTGAGTAGAAAATaGAGTTGGTTTTCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: GGPTELALSSNSWQGLWKILSRK*SWFSVV
Trigger: CACCACAGAAAACCAACTTCATTTTCTACTCAGAAT...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATTCTGAGTAGAAAATaGAGTTGGTTTTCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEILSRK*SWFSVV
Trigger: CACCACAGAAAACCAACTTCATTTTCTACTCAGAAT...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACAGCTCACTCACACCCTaGCCAGGGATGGCCACCAGG +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYSSLTP*PGMATR
Trigger: CCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCT...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTACCAGTCAAAGGTGCTaGATTTGTATAGAGCATTCA +
Preference number: 2 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATTSQRC*ICIEHS
Trigger: TGAATGCTCTATACAAATTCAGCACCTTTGACTGGT...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCCAGGTCTGAGGTCCTaGTGGGGATGGCACGATGCC +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYPGLRS*WGWHDA
Trigger: GGCATCGTGCCATCCCCATCAGGACCTCAGACCTGG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCAGGTACCCCAGGTCTaGGGTCCTGATGGGGATGGC +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYQVPQV*GPDGDG
Trigger: GCCATCCCCATCAGGACCTCAGACCTGGGGTACCTG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTCTTACCCCCTTACCATaGCAGGTGGGAGGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: SSFQPRIRILLIFQADVCLTPLP*QVGGAQ
Trigger: CTGGGCCCCTCCCACCTGGCATGGTAAGGGGGTAAG...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGGCAGAGGTCGGAGAATaGACCTCTTCCCTGAGCGTC +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERAEVGE*TSSLSV
Trigger: GACGCTCAGGGAAGAGGTGCATTCTCCGACCTCTGC...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAACCAGGAGATGGAAATaGCCCAGCTCCCAGTGGGCG +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKTRRWK*PSSQWA
Trigger: CGCCCACTGGGAGCTGGGGCATTTCCATCTCCTGGT...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAGGCTCAGTTCCAGTCTaGAATTCACTTCTGAGAATG +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISGSVPV*NSLLRM
Trigger: CATTCTCAGAAGTGAATTGCAGACTGGAACTGAGCC...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAAGCGAGCACTGGGGGTaGTGGCTAGGCCATAGCTAC +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKSEHWG*WLGHSY
Trigger: GTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCT...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATTGGATTGGGACAGGTaGGGGTGGGGCAGGACAGTC +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKLDWDR*GWGRTV
Trigger: GACTGTCCTGCCCCACCCCCACCTGTCCCAATCCAA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTGAAGTTGGTTTTCTGTaGTGTGGAACAGTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATEVGFL*CGTVFK
Trigger: TTTGAAGACTGTTCCACACCACAGAAAACCAACTTC...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGAAGTTGGTTTTCTGTaGTGTGGAACAGTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQEVGFL*CGTVFK
Trigger: TTTGAAGACTGTTCCACACCACAGAAAACCAACTTC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAAGGCTCCTCAGGCACTaGGTGGGGAGTAGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKRLLRH*VGSSRA
Trigger: AGCTCTGCTACTCCCCACCCAGTGCCTGAGGAGCCT...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGGCCGGAGGCTGCCGTaGCTTCCCACTTTGCTCTTG +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYGRRLP*LPTLLL
Trigger: CAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAGGGACATCAGAATTCTaGTCCAATTTCCAGACAGAG +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIGTSEF*SNFQTE
Trigger: CTCTGTCTGGAAATTGGACCAGAATTCTGATGTCCC...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGGGAGGGGGAGGAGGCTaGAGGGACATCAGAATTCTG +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERGGGGG*RDIRIL
Trigger: CAGAATTCTGATGTCCCTCCAGCCTCCTCCCCCTCC...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCACTCAATCTTTCTACCTaGACAGAGCCTGTTCTTCAC +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISLNLST*TEPVLH
Trigger: GTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAG...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATACTCAATCTTTCTACCTaGACAGAGCCTGTTCTTCAC +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRILNLST*TEPVLH
Trigger: GTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAG...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGGCAGAGATCTCATGTaGTTTGAAGGAAATCTACTT +
Preference number: 2 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQGRDLM*FEGNLL
Trigger: AAGTAGATTTCCTTCAAACCACATGAGATCTCTGCC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGCTCCATTTCTCAGAATaGGCCAGGGCCCTCAGACCC +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERLHFSE*ARALRP
Trigger: GGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAG...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGAGGAGAGGCTAGGCTaGGAGGTTACCAACCACCCC +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYEERLG*EVTNHP
Trigger: GGGGTGGTTGGTAACCTCTCAGCCTAGCCTCTCCTC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGCTTAACAGGATCCACTaGGGTAAAGGGGCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERLNRIH*GKGASP
Trigger: GGGAGAGGCCCCTTTACCTCAGTGGATCCTGTTAAG...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGAATGCACCTCTTCCCTaGGCGTCCCTTACCCCCTTA +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERNAPLP*ASLTPL
Trigger: TAAGGGGGTAAGGGACGCTCAGGGAAGAGGTGCATT...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTACCAGTCAAAGGTGCTaGATTTGTATAGAGCATTCA +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPTSQRC*ICIEHS
Trigger: TGAATGCTCTATACAAATTCAGCACCTTTGACTGGT...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp AGCAACAGTGAGACAGAAGTTCATCTTGTTCCTCAGTGCTCAGTAGTATTGAGTGTGTCCCAGTCTGCGTaGGACACTGAGAAGGGGACA +
Preference number: 2 (lower is better)
Translates to: SNSETEVHLVPQCSVVLSVSQSA*DTEKGT
Trigger: TGTCCCCTTCTCAGTGTCTCACGCAGACTGGGACAC...ACTCAATACTACTGAGCACTGAGGAACAAGATGAACTTCTGTCTCACTGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR GCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTGGGCAGGCTCCTCCTaGTCCTCCTCTTCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYWAGSS*SSSSEL
Trigger: CAGCTCTGAAGAGGAGGAGCAGGAGGAGCCTGCCCA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACAGCGAGCACTGGGGGTaGTGGCTAGGCCATAGCTAC +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYSEHWG*WLGHSY
Trigger: GTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCT...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGAGCAGGCCCAGTTACTaGCTATCTCACCTAGGGGGT +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERSRPSY*LSHLGG
Trigger: ACCCCCTAGGTGAGATAGGCAGTAACTGGGCCTGCT...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTTGGATTGGGACAGGTaGGGGTGGGGCAGGACAGTC +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYLDWDR*GWGRTV
Trigger: GACTGTCCTGCCCCACCCCCACCTGTCCCAATCCAA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTTGGCTTCTCTTGGATTaGGACAGGTGGGGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: SSFQPRIRILLIFQADVCWLLLD*DRWGWG
Trigger: GCCCCACCCCCACCTGTCCCAATCCAAGAGAAGCCA...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTGGCTTCTCTTGGATTaGGACAGGTGGGGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYWLLLD*DRWGWG
Trigger: GCCCCACCCCCACCTGTCCCAATCCAAGAGAAGCCA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTGAAGTTGGTTTTCTGTaGTGTGGAACAGTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPEVGFL*CGTVFK
Trigger: TTTGAAGACTGTTCCACACCACAGAAAACCAACTTC...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAGAAGTTGGTTTTCTGTaGTGTGGAACAGTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTEVGFL*CGTVFK
Trigger: TTTGAAGACTGTTCCACACCACAGAAAACCAACTTC...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTTCTGGTCTCCTGAGATaGAAGCTGGGGAGCCCTCGG +
Preference number: 2 (lower is better)
Translates to: SSFQPRIRILLIFQADVCSGLLR*KLGSPR
Trigger: CCGAGGGCTCCCCAGCTTCCATCTCAGGAGACCAGA...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATTTTTCCATGAGTTCTaGTCTCCTGAGATGGAAGCT +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISFFHEF*SPEMEA
Trigger: AGCTTCCATCTCAGGAGACCAGAACTCATGGAAAAA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATTTTTCCATGAGTTCTaGTCTCCTGAGATGGAAGCT +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIFFHEF*SPEMEA
Trigger: AGCTTCCATCTCAGGAGACCAGAACTCATGGAAAAA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACAGGCTCCTCAGGCACTaGGTGGGGAGTAGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYRLLRH*VGSSRA
Trigger: AGCTCTGCTACTCCCCACCCAGTGCCTGAGGAGCCT...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GGCTGTCTGCACTCAGGGATTAGGCATATAGTGATCAAATGTGTCTCAGTACAACCTGGGATCCACAGGTaGCAGGCGGCAAACAAAGAA +
Preference number: 2 (lower is better)
Translates to: GCLHSGIRHIVIKCVSVQPGIHR*QAANKE
Trigger: TTCTTTGTTTGCCGCCTGCCACCTGTGGATCCCAGG...TTGTACTGAGACACATTTGATCACTATATGCCTAATCCCTGAGTGCAGACAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR TCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTATTCTGAGTAGAAAATaGAGTTGGTTTTCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPILSRK*SWFSVV
Trigger: CACCACAGAAAACCAACTTCATTTTCTACTCAGAAT...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAACCAGTCAAAGGTGCTaGATTTGTATAGAGCATTCA +
Preference number: 2 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISTSQRC*ICIEHS
Trigger: TGAATGCTCTATACAAATTCAGCACCTTTGACTGGT...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAACCAGTCAAAGGTGCTaGATTTGTATAGAGCATTCA +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRITSQRC*ICIEHS
Trigger: TGAATGCTCTATACAAATTCAGCACCTTTGACTGGT...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTGGGAATATAGGGCTTaGTTGTGGGTGGGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERWEYRA*LWVGGR
Trigger: TCTGCCACCCACCCACAATCAAGCCCTATATTCCCA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTATATACAAGGCAAGCTGGTTCCTGGGATCCACAGGTGGCAGGCGGCAAACAACTTCTCTATCTGCTCTaGTATAAAGGGATCCTAAGG +
Preference number: 2 (lower is better)
Translates to: LYTRQAGSWDPQVAGGKQLLYLL*YKGILR
Trigger: CCTTAGGATCCCTTTATATCAGAGCAGATAGAGAAG...TTGTTTGCCGCCTGCCACCTGTGGATCCCAGGAACCAGCTTGCCTTGTATATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR TCA 90 bp TTATATACAAGGCAAGCTGGTTCCTGGGATCCACAGGTGGCAGGCGGCAAACAACAAATCAGGGCCTCATaGATATCAAACACACTCAGT +
Preference number: 2 (lower is better)
Translates to: LYTRQAGSWDPQVAGGKQQIRAS*ISNTLS
Trigger: ACTGAGTGTGTTTGATATTCATGAGGCCCTGATTTG...TTGTTTGCCGCCTGCCACCTGTGGATCCCAGGAACCAGCTTGCCTTGTATATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR GCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAAGCCCTCGGCAAAGCTaGTGTTTCCAAGGAGGGACA +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKSPRQS*CFQGGT
Trigger: TGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCT...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGCAGAGGTCGGAGAATaGACCTCTTCCCTGAGCGTC +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYAEVGE*TSSLSV
Trigger: GACGCTCAGGGAAGAGGTGCATTCTCCGACCTCTGC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATATCCCAGGATCTGTTaGCAGAGCCAGCAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKYPRIC*QSQQRR
Trigger: CCTCCTCTGCTGGCTCTGGCAACAGATCCTGGGATA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGCTTTGGGGAAAGTCCTaGCAAGTCTCTGACCCTGGA +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERLWGKS*QVSDPG
Trigger: TCCAGGGTCAGAGACTTGGCAGGACTTTCCCCAAAG...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp GGCTGTCTGCACTCAGGGATTAGGCATATAGTGATCAAATGTGTCTCAGTACAAGACGTGCTGTCTTTCTaGATCCTTGCAGAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: GCLHSGIRHIVIKCVSVQDVLSF*ILAESR
Trigger: CCTGCTCTCTGCAAGGATGCAGAAAGACAGCACGTC...TTGTACTGAGACACATTTGATCACTATATGCCTAATCCCTGAGTGCAGACAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAGAAGTTGGTTTTCTGTaGTGTGGAACAGTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIEVGFL*CGTVFK
Trigger: TTTGAAGACTGTTCCACACCACAGAAAACCAACTTC...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATCCTGGAGAAGTCTGTaGATCCTGTCAGGGTCAGCG +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKSWRSL*ILSGSA
Trigger: CGCTGACCCTGACAGGATCCACAGACTTCTCCAGGA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAACACCCTGACCAGGGATaGCCACCAGGAGATGGAAAT +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKHPDQG*PPGDGN
Trigger: ATTTCCATCTCCTGGTGGCCATCCCTGGTCAGGGTG...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTCCTCAGGCACTGGGTaGGGAGTAGCAGAGCTCACT +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYSSGTG*GVAELT
Trigger: AGTGAGCTCTGCTACTCCCCACCCAGTGCCTGAGGA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GTGCTGGGGATCAAATCAGGGCCTCATGAATATCAAACACACTCAGTAGCTGAAATCCGAGGCGTGACGTaGGCAATTACACATTCCAAG +
Preference number: 2 (lower is better)
Translates to: VLGIKSGPHEYQTHSVAEIRGVT*AITHSK
Trigger: CTTGGAATGTGTAATTGCCCACGTCACGCCTCGGAT...TTCAGCTACTGAGTGTGTTTGATATTCATGAGGCCCTGATTTGATCCCCAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR TCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTCTTAACAGGATCCACTaGGGTAAAGGGGCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: SSFQPRIRILLIFQADVCLNRIH*GKGASP
Trigger: GGGAGAGGCCCCTTTACCTCAGTGGATCCTGTTAAG...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCTTAACAGGATCCACTaGGGTAAAGGGGCCTCTCCC +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYLNRIH*GKGASP
Trigger: GGGAGAGGCCCCTTTACCTCAGTGGATCCTGTTAAG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATGGGAATATAGGGCTTaGTTGTGGGTGGGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKWEYRA*LWVGGR
Trigger: TCTGCCACCCACCCACAATCAAGCCCTATATTCCCA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GGCTGTCTGCACTCAGGGATTAGGCATATAGTGATCAAATGTGTCTCAGTACAACAGGGCTGGAACAGCTaGTGTTTGTCCTCTGATAAC +
Preference number: 2 (lower is better)
Translates to: GCLHSGIRHIVIKCVSVQQGWNS*CLSSDN
Trigger: GTTATCAGAGGACAAACATCAGCTGTTCCAGCCCTG...TTGTACTGAGACACATTTGATCACTATATGCCTAATCCCTGAGTGCAGACAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR GCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACAGCCCTCGGCAAAGCTaGTGTTTCCAAGGAGGGACA +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYSPRQS*CFQGGT
Trigger: TGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCT...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTATCCCAGGATCTGTTaGCAGAGCCAGCAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYYPRIC*QSQQRR
Trigger: CCTCCTCTGCTGGCTCTGGCAACAGATCCTGGGATA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAACTTTGGGGAAAGTCCTaGCAAGTCTCTGACCCTGGA +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKLWGKS*QVSDPG
Trigger: TCCAGGGTCAGAGACTTGGCAGGACTTTCCCCAAAG...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp TTATATACAAGGCAAGCTGGTTCCTGGGATCCACAGGTGGCAGGCGGCAAACAATATCTTTTGAGCCCATaGTCATCAGCTCTGTTCAAT +
Preference number: 2 (lower is better)
Translates to: LYTRQAGSWDPQVAGGKQYLLSP*SSALFN
Trigger: ATTGAACAGAGCTGATGAGCATGGGCTCAAAAGATA...TTGTTTGCCGCCTGCCACCTGTGGATCCCAGGAACCAGCTTGCCTTGTATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCATGCTGGCTTCTCTTaGATTGGGACAGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYHAGFS*IGTGGG
Trigger: ACCCCCACCTGTCCCAATCCAAGAGAAGCCAGCATG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTCCTGGAGAAGTCTGTaGATCCTGTCAGGGTCAGCG +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYSWRSL*ILSGSA
Trigger: CGCTGACCCTGACAGGATCCACAGACTTCTCCAGGA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTTCCTGGAGAAGTCTGTaGATCCTGTCAGGGTCAGCG +
Preference number: 2 (lower is better)
Translates to: SSFQPRIRILLIFQADVCSWRSL*ILSGSA
Trigger: CGCTGACCCTGACAGGATCCACAGACTTCTCCAGGA...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACAGCTGGCAGGGTCTCTaGAAGGTCCTGGAGAAGTCT +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYSWQGL*KVLEKS
Trigger: AGACTTCTCCAGGACCTTCCAGAGACCCTGCCAGCT...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCAGCCCAGCCTTCTCTaGCTCAGTTCCAGTCTGCAA +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYQPSLL*LSSSLQ
Trigger: TTGCAGACTGGAACTGAGCCAGAGAAGGCTGGGCTG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTCTGCAATTCACTTCTaGGAATGGAACCCAAGCCCA +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERSAIHF*EWNPSP
Trigger: TGGGCTTGGGTTCCATTCTCAGAAGTGAATTGCAGA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATTACTGTGGTGTGCCTaGGTCACTTTGGGGAAAGTC +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKLLWCA*VTLGKV
Trigger: GACTTTCCCCAAAGTGACTCAGGCACACCACAGTAA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTGGGAATATAGGGCTTaGTTGTGGGTGGGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYWEYRA*LWVGGR
Trigger: TCTGCCACCCACCCACAATCAAGCCCTATATTCCCA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp CTAAGACCTTTCAGACCCAAGCATCAGACGTGCTGTCTTTCTGCATCCTTGCAGTTTAGCCTGTATTTCTaGCCTGTGGAAATAATGAGC +
Preference number: 2 (lower is better)
Translates to: LRPFRPKHQTCCLSASLQFSLYF*PVEIMS
Trigger: GCTCATTATTTCCACAGGTCAGAAATACAGGCTAAA...CTGCAAGGATGCAGAAAGACAGCACGTCTGATGCTTGGGTCTGAAAGGTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR GCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCTTTGGGGAAAGTCCTaGCAAGTCTCTGACCCTGGA +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYLWGKS*QVSDPG
Trigger: TCCAGGGTCAGAGACTTGGCAGGACTTTCCCCAAAG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp ATCAGCTCTGTTCAATATCAGGACTTGGTATCCATTTATCAGCAGCTTTACCAAGCTCTGAGGAGGGTGTaGTCACCTCTACATCAGGGA +
Preference number: 2 (lower is better)
Translates to: ISSVQYQDLVSIYQQLYQALRRV*SPLHQG
Trigger: TCCCTGATGTAGAGGTGAGCACACCCTCCTCAGAGC...TTGGTAAAGCTGCTGATAAATGGATACCAAGTCCTGATATTGAACAGAGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR GCA 90 bp GGCTGTCTGCACTCAGGGATTAGGCATATAGTGATCAAATGTGTCTCAGTACAAGGGGGCTTCTCTATCTaGTCTGATATAAAGGGATCC +
Preference number: 2 (lower is better)
Translates to: GCLHSGIRHIVIKCVSVQGGFSI*SDIKGS
Trigger: GGATCCCTTTATATCAGAGCAGATAGAGAAGCCCCC...TTGTACTGAGACACATTTGATCACTATATGCCTAATCCCTGAGTGCAGACAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGAGGTCCTACTGAGCTaGCTCTGTCCTCTAACAGCT +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYEVLLS*LCPLTA
Trigger: AGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGGGCTTGATTGTGGGTaGGTGGCAGAGATCTCATGT +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYGLDCG*VAEISC
Trigger: ACATGAGATCTCTGCCACCCACCCACAATCAAGCCC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR CAA 90 bp GATCTCATTACGGATGGTGGTGAGCCATCATGTAGTTACTGGGATTaGAACTCAGGACTTTTGGAAGAACAGTCTGTGCTCTTAACCACT +
Preference number: 2 (lower is better)
Translates to: DLITDGGEPSCSYWD*NSGLLEEQSVLLTT
Trigger: AGTGGTTAAGAGCACAGACTGTTCTTCCAAAAGTCCTGAGTTCAAATCCCAGTAACTACATGATGGCTCACCACCATCCGTAATGAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR TCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTAGCGTTGAAAATGAGTaGGGAGAGGCTAGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: SSFQPRIRILLIFQADVCSVENE*GEARLR
Trigger: TCTCAGCCTAGCCTCTCCTCACTCATTTTCAACGCT...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCTCTGTCAAGCCTCATaGAGCTCATTCCAGCCTAGA +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYLCQAS*SSFQPR
Trigger: TCTAGGCTGGAATGAGCTTCATGAGGCTTGACAGAG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATCTGCAATTCACTTCTaGGAATGGAACCCAAGCCCA +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKSAIHF*EWNPSP
Trigger: TGGGCTTGGGTTCCATTCTCAGAAGTGAATTGCAGA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GGCTGTCTGCACTCAGGGATTAGGCATATAGTGATCAAATGTGTCTCAGTACAAAGTCTACTCTTGAGGTaGTTCCAGTCTACTCTTGAC +
Preference number: 2 (lower is better)
Translates to: GCLHSGIRHIVIKCVSVQSLLLR*FQSTLD
Trigger: GTCAAGAGTAGACTGGAATCACCTCAAGAGTAGACT...TTGTACTGAGACACATTTGATCACTATATGCCTAATCCCTGAGTGCAGACAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR GCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGCGAAGGCCACAGATaGATTCGAATGTTCACAGTA +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKGEGHR*IRMFTV
Trigger: TACTGTGAACATTCGAATGCATCTGTGGCCTTCGCC...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTCTGCAATTCACTTCTaGGAATGGAACCCAAGCCCA +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYSAIHF*EWNPSP
Trigger: TGGGCTTGGGTTCCATTCTCAGAAGTGAATTGCAGA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGGCGAAGGCCACAGATaGATTCGAATGTTCACAGTA +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYGEGHR*IRMFTV
Trigger: TACTGTGAACATTCGAATGCATCTGTGGCCTTCGCC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp GGCTGTCTGCACTCAGGGATTAGGCATATAGTGATCAAATGTGTCTCAGTACAAATTGATGCGTTCAAATaGCATAGAAAGCAAGCGACG +
Preference number: 2 (lower is better)
Translates to: GCLHSGIRHIVIKCVSVQIDAFK*HRKQAT
Trigger: CGTCGCTTGCTTTCTATGGCATTTGAACGCATCAAT...TTGTACTGAGACACATTTGATCACTATATGCCTAATCCCTGAGTGCAGACAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCACATGCTGGCTTCTCTTaGATTGGGACAGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSHAGFS*IGTGGG
Trigger: ACCCCCACCTGTCCCAATCCAAGAGAAGCCAGCATG...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACAAGTCTGCTGCAGGCTaGCTTCTTTATCACATGCTG +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYKSAAG*LLYHML
Trigger: CAGCATGTGATAAAGAAGCCAGCCTGCAGCAGACTT...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTAAGTCTGCTGCAGGCTaGCTTCTTTATCACATGCTG +
Preference number: 2 (lower is better)
Translates to: SSFQPRIRILLIFQADVCKSAAG*LLYHML
Trigger: CAGCATGTGATAAAGAAGCCAGCCTGCAGCAGACTT...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTTTTTCCATGAGTTCTaGTCTCCTGAGATGGAAGCT +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERFFHEF*SPEMEA
Trigger: AGCTTCCATCTCAGGAGACCAGAACTCATGGAAAAA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGGACATCAGAATTCTaGTCCAATTTCCAGACAGAG +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKGTSEF*SNFQTE
Trigger: CTCTGTCTGGAAATTGGACCAGAATTCTGATGTCCC...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAACTCAATCTTTCTACCTaGACAGAGCCTGTTCTTCAC +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKLNLST*TEPVLH
Trigger: GTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAG...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp GTGCTGGGGATCAAATCAGGGCCTCATGAATATCAAACACACTCAGTAGCTGAATTACTTCCTGAAACATaGTGCAGAGTTGTTCTCATG +
Preference number: 2 (lower is better)
Translates to: VLGIKSGPHEYQTHSVAELLPET*CRVVLM
Trigger: CATGAGAACAACTCTGCACCATGTTTCAGGAAGTAA...TTCAGCTACTGAGTGTGTTTGATATTCATGAGGCCCTGATTTGATCCCCAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR TCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGACCAGTCAAAGGTGCTaGATTTGTATAGAGCATTCA +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERTSQRC*ICIEHS
Trigger: TGAATGCTCTATACAAATTCAGCACCTTTGACTGGT...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR GCA 90 bp AGCAACAGTGAGACAGAAGTTCATCTTGTTCCTCAGTGCTCAGTAGTATTGAGTAAGCAAGCGACGTCATaGAAGGTTAATAGAGTAAGG +
Preference number: 2 (lower is better)
Translates to: SNSETEVHLVPQCSVVLSKQATS*KVNRVR
Trigger: CCTTACTCTATTAACCTTGCATGACGTCGCTTGCTT...ACTCAATACTACTGAGCACTGAGGAACAAGATGAACTTCTGTCTCACTGTTGCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATTTTTCCATGAGTTCTaGTCTCCTGAGATGGAAGCT +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKFFHEF*SPEMEA
Trigger: AGCTTCCATCTCAGGAGACCAGAACTCATGGAAAAA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGGGACATCAGAATTCTaGTCCAATTTCCAGACAGAG +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYGTSEF*SNFQTE
Trigger: CTCTGTCTGGAAATTGGACCAGAATTCTGATGTCCC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp AGCAACAGTGAGACAGAAGTTCATCTTGTTCCTCAGTGCTCAGTAGTATTGAGTAACCAACATGCAGACTaGACACATGTCACAGTGAAA +
Preference number: 2 (lower is better)
Translates to: SNSETEVHLVPQCSVVLSNQHAD*THVTVK
Trigger: TTTCACTGTGACATGTGTCCAGTCTGCATGTTGGTT...ACTCAATACTACTGAGCACTGAGGAACAAGATGAACTTCTGTCTCACTGTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CCA 90 bp AGCAACAGTGAGACAGAAGTTCATCTTGTTCCTCAGTGCTCAGTAGTATTGAGTCTGTTTGAATGTAGGTaGAAATATGGGCACCAGGTA +
Preference number: 2 (lower is better)
Translates to: SNSETEVHLVPQCSVVLSLFECR*KYGHQV
Trigger: TACCTGGTGCCCATATTTCCACCTACATTCAAACAG...ACTCAATACTACTGAGCACTGAGGAACAAGATGAACTTCTGTCTCACTGTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR TCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGAGATCTCATGTGGTTTaGAGGAAATCTACTTCTGAA +
Preference number: 2 (lower is better)
Translates to: KKQDQTPKHYSHICHYERRSHVV*RKSTSE
Trigger: TTCAGAAGTAGATTTCCTTCAAACCACATGAGATCT...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp GCTGGAACAGCTGATGTTTGTCCTCTGATAACTATGACTATATCTTTTGAGCCCGTTAATAGAGTAAGGTaGGAAACCACCAATGTAGCA +
Preference number: 2 (lower is better)
Translates to: AGTADVCPLITMTISFEPVNRVR*ETTNVA
Trigger: TGCTACATTGGTGGTTTCTCACCTTACTCTATTAAC...GGGCTCAAAAGATATAGTCATAGTTATCAGAGGACAAACATCAGCTGTTCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR GCA 90 bp GCTGGAACAGCTGATGTTTGTCCTCTGATAACTATGACTATATCTTTTGAGCCCTACCTCCATCTGATTTaGCTAAAGTTAACTTTGGGG +
Preference number: 2 (lower is better)
Translates to: AGTADVCPLITMTISFEPYLHLI*LKLTLG
Trigger: CCCCAAAGTTAACTTTAGGCAAATCAGATGGAGGTA...GGGCTCAAAAGATATAGTCATAGTTATCAGAGGACAAACATCAGCTGTTCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR GCA 90 bp AGCAACAGTGAGACAGAAGTTCATCTTGTTCCTCAGTGCTCAGTAGTATTGAGTAAACTACAGAGCCCATaGCACAAAAATGGCTATAGA +
Preference number: 2 (lower is better)
Translates to: SNSETEVHLVPQCSVVLSKLQSP*HKNGYR
Trigger: TCTATAGCCATTTTTGTGGCATGGGCTCTGTAGTTT...ACTCAATACTACTGAGCACTGAGGAACAAGATGAACTTCTGTCTCACTGTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR GCA 90 bp GGCTGTCTGCACTCAGGGATTAGGCATATAGTGATCAAATGTGTCTCAGTACAATTCTTTAGAGAGCTTTaGAATCCCTTTTCTTACGAG +
Preference number: 2 (lower is better)
Translates to: GCLHSGIRHIVIKCVSVQFFREL*NPFSYE
Trigger: CTCGTAAGAAAAGGGATTGCAAAGCTCTCTAAAGAA...TTGTACTGAGACACATTTGATCACTATATGCCTAATCCCTGAGTGCAGACAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CAA 90 bp TCAAATATCAGCCAGGATCAGCCAGCAATAAATAAACATGGTTGTTaGCTTACTACAAGAAGAATCTCAAGAGGTCCACATGTGTCTGCT +
Preference number: 2 (lower is better)
Translates to: SNISQDQPAINKHGC*LTTRRISRGPHVSA
Trigger: AGCAGACACATGTGGACCTCTTGAGATTCTTCTTGTAGTAAGCAAACAACCATGTTTATTTATTGCTGGCTGATCCTGGCTGATATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR TCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAATTCTGAGTAGAAAATaGAGTTGGTTTTCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKILSRK*SWFSVV
Trigger: CACCACAGAAAACCAACTTCATTTTCTACTCAGAAT...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACACCAGTCAAAGGTGCTaGATTTGTATAGAGCATTCA +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYTSQRC*ICIEHS
Trigger: TGAATGCTCTATACAAATTCAGCACCTTTGACTGGT...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAAGATCTCATGTGGTTTaGAGGAAATCTACTTCTGAA +
Preference number: 2 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKRSHVV*RKSTSE
Trigger: TTCAGAAGTAGATTTCCTTCAAACCACATGAGATCT...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCAAAGTCTGCTGCAGGCTaGCTTCTTTATCACATGCTG +
Preference number: 2 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSKSAAG*LLYHML
Trigger: CAGCATGTGATAAAGAAGCCAGCCTGCAGCAGACTT...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGAAGTTGGTTTTCTGTaGTGTGGAACAGTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYEVGFL*CGTVFK
Trigger: TTTGAAGACTGTTCCACACCACAGAAAACCAACTTC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACAGATCTCATGTGGTTTaGAGGAAATCTACTTCTGAA +
Preference number: 2 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYRSHVV*RKSTSE
Trigger: TTCAGAAGTAGATTTCCTTCAAACCACATGAGATCT...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR CAA 90 bp AGAGGTTACCCATTACCATCTGTTATTAGTAATTTAGTTCACACATaGATTACTTGTTATATACAAGGCAAGCTGGTTCCTGGGATCCAC +
Preference number: 2 (lower is better)
Translates to: RGYPLPSVISNLVHT*ITCYIQGKLVPGIH
Trigger: GTGGATCCCAGGAACCAGCTTGCCTTGTATATAACAAGTAATCAATGTGTGAACTAAATTACTAATAACAGATGGTAATGGGTAACCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR TCA 90 bp ATCAGCTCTGTTCAATATCAGGACTTGGTATCCATTTATCAGCAGCTTTACCAATTAAAGGTAGGTGTCTaGAATTTTCTACCCTGGATA +
Preference number: 2 (lower is better)
Translates to: ISSVQYQDLVSIYQQLYQLKVGV*NFLPWI
Trigger: TATCCAGGGTAGAAAATTTCAGACACCTACCTTTAA...TTGGTAAAGCTGCTGATAAATGGATACCAAGTCCTGATATTGAACAGAGCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 72 bp CAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTaGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCG +
Preference number: 3 (lower is better)
Translates to: QRREGSAFNTLQ*EVMFLGSVTRA
Trigger: CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 72 bp GGAAATGCCCCAGCTCCCAGTGGGCGTCCTCAGGCCTaGGGCAGAGGTCGGAGAATGCACCTCTTCCCTGAG +
Preference number: 3 (lower is better)
Translates to: GNAPAPSGRPQA*GRGRRMHLFPE
Trigger: CTCAGGGAAGAGGTGCATTCTCCGACCTCTGCCTCAGGCCTGAGGACGCCCACTGGGAGCTGGGGCATTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 72 bp GAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTaGTGGGGATGGCACGATGCCCAGTGGGCAGGCTCC +
Preference number: 3 (lower is better)
Translates to: EGQSSGTPGLRS*WGWHDAQWAGS
Trigger: GGAGCCTGCCCACTGGGCATCGTGCCATCCCCATCAGGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 72 bp CTCCTGAGATGGAAGCTGGGGAGCCCTCGGCAAAGCTaGTGTTTCCAAGGAGGGACAGGGCAGCTGGGGAGG +
Preference number: 3 (lower is better)
Translates to: LLRWKLGSPRQS*CFQGGTGQLGR
Trigger: CCTCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCAGCTTCCATCTCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 72 bp ATGCACATGTGTGTGGGAGTGGCACATGCACCTGAGTaGCGCGCTGGCAGAGGCTTGAGGCGCGGCATCCCT +
Preference number: 3 (lower is better)
Translates to: MHMCVGVAHAPE*RAGRGLRRGIP
Trigger: AGGGATGCCGCGCCTCAAGCCTCTGCCAGCGCGGCACTCAGGTGCATGTGCCACTCCCACACACATGTGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CAA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCTTACAGAGGCCCTGTTaGTGGGGTCGGGGGTTGGGG +
Preference number: 3 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSLQRPC*WGRGLG
Trigger: CCCCAACCCCCGACCCCACAAACAGGGCCTCTGTAA...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 72 bp ACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTaGCCAGGGCGCTTGCCCTGCCCGACAGTCACTGGT +
Preference number: 3 (lower is better)
Translates to: TPCSGRSCFWGL*PGRLPCPTVTG
Trigger: ACCAGTGACTGTCGGGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 72 bp GGCCTGAGGCAGAGGTCGGAGAATGCACCTCTTCCCTaGGCGTCCCTTACCCCCTTACCATGCCAGGTGGGA +
Preference number: 3 (lower is better)
Translates to: GLRQRSENAPLP*ASLTPLPCQVG
Trigger: TCCCACCTGGCATGGTAAGGGGGTAAGGGACGCTCAGGGAAGAGGTGCATTCTCCGACCTCTGCCTCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR CCA 72 bp GGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATaGCCACCAGGAGATGGAAATGCCCCAGCTCCCAGT +
Preference number: 3 (lower is better)
Translates to: GSSRAHSHPDQG*PPGDGNAPAPS
Trigger: ACTGGGAGCTGGGGCATTTCCATCTCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCCTGTCAGGGTCAGCGTaGAAAATGAGTGAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: PAVGGHVSGVCDQGACPALSGSA*KMSEER
Trigger: CCTCTCCTCACTCATTTTCAACGCTGACCCTGACAG...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGACTGTCAGGGTCAGCGTaGAAAATGAGTGAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGLSGSA*KMSEER
Trigger: CCTCTCCTCACTCATTTTCAACGCTGACCCTGACAG...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTTACAGAGGCCCTGTTaGTGGGGTCGGGGGTTGGGG +
Preference number: 3 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQLQRPC*WGRGLG
Trigger: CCCCAACCCCCGACCCCACAAACAGGGCCTCTGTAA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 72 bp AATTATGCACATGTGTGTGGGAGTGGCACATGCACCTaGGTGCCGCGCTGGCAGAGGCTTGAGGCGCGGCAT +
Preference number: 3 (lower is better)
Translates to: NYAHVCGSGTCT*VPRWQRLEARH
Trigger: ATGCCGCGCCTCAAGCCTCTGCCAGCGCGGCACTCAGGTGCATGTGCCACTCCCACACACATGTGCATAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 72 bp GAGGAGGGGGAGGAGGCTGGAGGGACATCAGAATTCTaGTCCAATTTCCAGACAGAGGCGGCAGCAGAGGGA +
Preference number: 3 (lower is better)
Translates to: EEGEEAGGTSEF*SNFQTEAAAEG
Trigger: TCCCTCTGCTGCCGCCTCTGTCTGGAAATTGGACCAGAATTCTGATGTCCCTCCAGCCTCCTCCCCCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTGTCAGGGTCAGCGTaGAAAATGAGTGAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRALSGSA*KMSEER
Trigger: CCTCTCCTCACTCATTTTCAACGCTGACCCTGACAG...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 72 bp CTCCTCCTGCTCCTCCTCTTCAGAGCTGGTGTAGCTTaGGCCCATGCTAATCCAACCCCTACAGCCCAGCCT +
Preference number: 3 (lower is better)
Translates to: LLLLLLFRAGVA*AHANPTPTAQP
Trigger: AGGCTGGGCTGTAGGGGTTGGATTAGCATGGGCTCAAGCTACACCAGCTCTGAAGAGGAGGAGCAGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 72 bp CCTAAAGAAGCTCCAAACAGAGGGGGTGACATCACATaGTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCT +
Preference number: 3 (lower is better)
Translates to: PKEAPNRGGDIT*SAEGGLGLQHP
Trigger: AGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTGATGTCACCCCCTCTGTTTGGAGCTTCTTTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR CCA 72 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTaGCAGGGTCTCTGGAAGGTCCTGGAGAAGTCTGTG +
Preference number: 3 (lower is better)
Translates to: GGPTELALSSNS*QGLWKVLEKSV
Trigger: CACAGACTTCTCCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR CCA 72 bp GGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTaGGGAGGCGAAGGCCACAGATGCATTCGAATGTTC +
Preference number: 3 (lower is better)
Translates to: GKAAVSKEGQGS*GGEGHRCIRMF
Trigger: GAACATTCGAATGCATCTGTGGCCTTCGCCTCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR CCA 72 bp TATAGAGCATTCAGCAGGGGAGGCCGGAGGCTGCCGTaGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAG +
Preference number: 3 (lower is better)
Translates to: YRAFSRGGRRLP*LPTLLLLTPLQ
Trigger: CTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTCCCCTGCTGAATGCTCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGCTGTCAGGGTCAGCGTaGAAAATGAGTGAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAELSGSA*KMSEER
Trigger: CCTCTCCTCACTCATTTTCAACGCTGACCCTGACAG...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGCTGTCAGGGTCAGCGTaGAAAATGAGTGAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWLSGSA*KMSEER
Trigger: CCTCTCCTCACTCATTTTCAACGCTGACCCTGACAG...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCTGGTGTATGAAGTTTTaGTGTCATCCAAAGGGCACG +
Preference number: 3 (lower is better)
Translates to: PAVGGHVSGVCDQGACPAWCMKF*CHPKGT
Trigger: CGTGCCCTTTGGATGACACAAAAACTTCATACACCA...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 72 bp GGCCCCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTaGTTGTGGGTGGGTGGCAGAGATCTCATGTGGTTT +
Preference number: 3 (lower is better)
Translates to: GPRSQPPWEYRA*LWVGGRDLMWF
Trigger: AAACCACATGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 72 bp ATTTGTATAGAGCATTCAGCAGGGGAGGCCGGAGGCTaGCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCC +
Preference number: 3 (lower is better)
Translates to: ICIEHSAGEAGG*RGFPLCSCLLP
Trigger: GGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTCCCCTGCTGAATGCTCTATACAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGCTGTCAGGGTCAGCGTaGAAAATGAGTGAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQLSGSA*KMSEER
Trigger: CCTCTCCTCACTCATTTTCAACGCTGACCCTGACAG...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTGGTGTATGAAGTTTTaGTGTCATCCAAAGGGCACG +
Preference number: 3 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSWCMKF*CHPKGT
Trigger: CGTGCCCTTTGGATGACACAAAAACTTCATACACCA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 72 bp GGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTaGCCTGCCCGACAGTCACTGGTGTATGAAGTTTTT +
Preference number: 3 (lower is better)
Translates to: GGHVSGVCDQGA*PARQSLVYEVF
Trigger: AAAAACTTCATACACCAGTGACTGTCGGGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 72 bp CTAGGGCTGATATTTCCCATGAGCGAGCACTGGGGGTaGTGGCTAGGCCATAGCTACAGCTCCATTTCTCAG +
Preference number: 3 (lower is better)
Translates to: LGLIFPMSEHWG*WLGHSYSSISQ
Trigger: CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCATGGGAAATATCAGCCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 72 bp GTCACTACGAAAGGCGCAGACAGCAGGCCCAGTTACTaGCTATCTCACCTAGGGGGTTTTCGGTTGGACTCT +
Preference number: 3 (lower is better)
Translates to: VTTKGADSRPSY*LSHLGGFRLDS
Trigger: AGAGTCCAACCGAAAACCCCCTAGGTGAGATAGGCAGTAACTGGGCCTGCTGTCTGCGCCTTTCGTAGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR CCA 72 bp GCTGGCAGGGTCTCTGGAAGGTCCTGGAGAAGTCTGTaGATCCTGTCAGGGTCAGCGTTGAAAATGAGTGAG +
Preference number: 3 (lower is better)
Translates to: AGRVSGRSWRSL*ILSGSALKMSE
Trigger: CTCACTCATTTTCAACGCTGACCCTGACAGGATCCACAGACTTCTCCAGGACCTTCCAGAGACCCTGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCTCACAGAGCGAAAAGTaGACAGTTTCTGTATCACAA +
Preference number: 3 (lower is better)
Translates to: PAVGGHVSGVCDQGACPASQSEK*TVSVSQ
Trigger: TTGTGATACAGAAACTGTCAACTTTTCGCTCTGTGA...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGTGGTGTATGAAGTTTTaGTGTCATCCAAAGGGCACG +
Preference number: 3 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAWCMKF*CHPKGT
Trigger: CGTGCCCTTTGGATGACACAAAAACTTCATACACCA...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR CCA 72 bp GGGCTGATATTTCCCATGAGCGAGCACTGGGGGTGCTaGCTAGGCCATAGCTACAGCTCCATTTCTCAGAAT +
Preference number: 3 (lower is better)
Translates to: GLIFPMSEHWGC*LGHSYSSISQN
Trigger: ATTCTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCATGGGAAATATCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR CCA 72 bp AAGGGTTCTTTTCAATTATGCACATGTGTGTGGGAGTaGCACATGCACCTGAGTGCCGCGCTGGCAGAGGCT +
Preference number: 3 (lower is better)
Translates to: KGSFQLCTCVWE*HMHLSAALAEA
Trigger: AGCCTCTGCCAGCGCGGCACTCAGGTGCATGTGCCACTCCCACACACATGTGCATAATTGAAAAGAACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CAA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCTCACAGAGCGAAAAGTaGACAGTTTCTGTATCACAA +
Preference number: 3 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSSQSEK*TVSVSQ
Trigger: TTGTGATACAGAAACTGTCAACTTTTCGCTCTGTGA...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATACTGTCAGGGTCAGCGTaGAAAATGAGTGAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: HSYSSISQNGPGPSDPRILSGSA*KMSEER
Trigger: CCTCTCCTCACTCATTTTCAACGCTGACCCTGACAG...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 72 bp CCAGTTACTGGAATGCCCATGATACCGAGAATGGAGTaGAGTGGGGGAGAGAAAGAGATGCCGTCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: PVTGMPMIPRME*SGGEKEMPSAA
Trigger: AGCTGCAGACGGCATCTCTTTCTCTCCCCCACTTCACTCCATTCTCGGTATCATGGGCATTCCAGTAACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR GCA 72 bp AGCTCCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTaGATCCCTGTATCCTGCTATCCAAGGTCAAGGCAG +
Preference number: 3 (lower is better)
Translates to: SSPVGQLGPFLP*IPVSCYPRSRQ
Trigger: CTGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
3UTR GCA 72 bp GAGCTGAGCAGTTGTGAGAAGCCTGACATCTTACTGTaGCACTCCTCAGAGAAGCTGTGCCAACCACACATC +
Preference number: 3 (lower is better)
Translates to: ELSSCEKPDILL*HSSEKLCQPHI
Trigger: GATGTGTGGTTGGCACAGCTTCTCTGAGGAGTGGCACAGTAAGATGTCAGGCTTCTCACAACTGCTCAGCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 72 bp GTGCCTAATTTTTCCATGAGTTCTGGTCTCCTGAGATaGAAGCTGGGGAGCCCTCGGCAAAGCTGCTGTTTC +
Preference number: 3 (lower is better)
Translates to: VPNFSMSSGLLR*KLGSPRQSCCF
Trigger: GAAACAGCAGCTTTGCCGAGGGCTCCCCAGCTTCCATCTCAGGAGACCAGAACTCATGGAAAAATTAGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGTCACAGAGCGAAAAGTaGACAGTTTCTGTATCACAA +
Preference number: 3 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRASQSEK*TVSVSQ
Trigger: TTGTGATACAGAAACTGTCAACTTTTCGCTCTGTGA...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGTCACAGAGCGAAAAGTaGACAGTTTCTGTATCACAA +
Preference number: 3 (lower is better)
Translates to: GGPTELALSSNSWQGLWKSQSEK*TVSVSQ
Trigger: TTGTGATACAGAAACTGTCAACTTTTCGCTCTGTGA...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATTACAGAGGCCCTGTTaGTGGGGTCGGGGGTTGGGG +
Preference number: 3 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKLQRPC*WGRGLG
Trigger: CCCCAACCCCCGACCCCACAAACAGGGCCTCTGTAA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 72 bp CCTTCTCTGGCTCAGTTCCAGTCTGCAATTCACTTCTaGGAATGGAACCCAAGCCCATTTCTCTCCCACCTG +
Preference number: 3 (lower is better)
Translates to: PSLAQFQSAIHF*EWNPSPFLSHL
Trigger: CAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAATTGCAGACTGGAACTGAGCCAGAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 72 bp ATGCCGTCTGCAGCTTCTTGTATTGGCAGCATTAACTaGAGCCCACCCAGGGCTGGAACAGCTGATGTTTGT +
Preference number: 3 (lower is better)
Translates to: MPSAASCIGSIN*SPPRAGTADVC
Trigger: ACAAACATCAGCTGTTCCAGCCCTGGGTGGGCTTCAGTTAATGCTGCCAATACAAGAAGCTGCAGACGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR TCA 72 bp AGCAGGGCAGCTCTAGAGGTGATTCCAGTCTACTCTTaGGGTGATTCCAGTCTACTCTTGACCAACAGGCAG +
Preference number: 3 (lower is better)
Translates to: SRAALEVIPVYS*GDSSLLLTNRQ
Trigger: CTGCCTGTTGGTCAAGAGTAGACTGGAATCACCTCAAGAGTAGACTGGAATCACCTCTAGAGCTGCCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR TCA 72 bp TGGTCTGGCTTCAACTGGCTCTCCTGCCTCAGTTCCTaGCCAGTTCTGCACAACCACATCCAACTCAAAGAA +
Preference number: 3 (lower is better)
Translates to: WSGFNWLSCLSS*PVLHNHIQLKE
Trigger: TTCTTTGAGTTGGATGTGGTTGTGCAGAACTGGTCAGGAACTGAGGCAGGAGAGCCAGTTGAAGCCAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CAA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATGGTGTATGAAGTTTTaGTGTCATCCAAAGGGCACG +
Preference number: 3 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISWCMKF*CHPKGT
Trigger: CGTGCCCTTTGGATGACACAAAAACTTCATACACCA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATGGTGTATGAAGTTTTaGTGTCATCCAAAGGGCACG +
Preference number: 3 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIWCMKF*CHPKGT
Trigger: CGTGCCCTTTGGATGACACAAAAACTTCATACACCA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTTCAAAGGTGCTGAATTaGTATAGAGCATTCAGCAGG +
Preference number: 3 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPSKVLN*YRAFSR
Trigger: CCTGCTGAATGCTCTATACAAATTCAGCACCTTTGA...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 72 bp CTGGACCTGCCATCAAGGAAAAACTGGGTAAAGTGGTaGCCAGTTACTGGAATGCCCATGATACCGAGAATG +
Preference number: 3 (lower is better)
Translates to: LDLPSRKNWVKW*PVTGMPMIPRM
Trigger: CATTCTCGGTATCATGGGCATTCCAGTAACTGGGCACCACTTTACCCAGTTTTTCCTTGATGGCAGGTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR GCA 72 bp GACCCAAGCATCAGACGTGCTGTCTTTCTGCATCCTTaGAGAGAGCAGGAAGTAACCATGTTTTCCCGTTCA +
Preference number: 3 (lower is better)
Translates to: DPSIRRAVFLHP*REQEVTMFSRS
Trigger: TGAACGGGAAAACATGGTTACTTCCTGCTCTCTGCAAGGATGCAGAAAGACAGCACGTCTGATGCTTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 72 bp CTTCTGGACCTGCCATCAAGGAAAAACTGGGTAAAGTaGTGCCCAGTTACTGGAATGCCCATGATACCGAGA +
Preference number: 3 (lower is better)
Translates to: LLDLPSRKNWVK*CPVTGMPMIPR
Trigger: TCTCGGTATCATGGGCATTCCAGTAACTGGGCACCACTTTACCCAGTTTTTCCTTGATGGCAGGTCCAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 72 bp TATATACAAGGCAAGCTGGTTCCTGGGATCCACAGGTaGCAGGCGGCAAACAAAGAACAAACCGCTGATACA +
Preference number: 3 (lower is better)
Translates to: YIQGKLVPGIHR*QAANKEQTADT
Trigger: TGTATCAGCGGTTTGTTCTTTGTTTGCCGCCTGCCACCTGTGGATCCCAGGAACCAGCTTGCCTTGTATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 72 bp TTTAGAAAGGGTTCTTTTCAATTATGCACATGTGTGTaGGAGTGGCACATGCACCTGAGTGCCGCGCTGGCA +
Preference number: 3 (lower is better)
Translates to: FRKGSFQLCTCV*EWHMHLSAALA
Trigger: TGCCAGCGCGGCACTCAGGTGCATGTGCCACTCCCACACACATGTGCATAATTGAAAAGAACCCTTTCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CAA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATCACAGAGCGAAAAGTaGACAGTTTCTGTATCACAA +
Preference number: 3 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTSQSEK*TVSVSQ
Trigger: TTGTGATACAGAAACTGTCAACTTTTCGCTCTGTGA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATCAAAGGTGCTGAATTaGTATAGAGCATTCAGCAGG +
Preference number: 3 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISSKVLN*YRAFSR
Trigger: CCTGCTGAATGCTCTATACAAATTCAGCACCTTTGA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGCTAGGGGGTTTTCGGTaGGACTCTGCCGGCATAGTT +
Preference number: 3 (lower is better)
Translates to: KKQDQTPKHYSHICHYERLGGFR*DSAGIV
Trigger: AACTATGCCGGCAGAGTCCAACCGAAAACCCCCTAG...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR GCA 72 bp TCAACTGGCTCTCCTGCCTCAGTTCCTGACCAGTTCTaGACAACCACATCCAACTCAAAGAAACTACAATCC +
Preference number: 3 (lower is better)
Translates to: STGSPASVPDQF*TTTSNSKKLQS
Trigger: GGATTGTAGTTTCTTTGAGTTGGATGTGGTTGTGCAGAACTGGTCAGGAACTGAGGCAGGAGAGCCAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 72 bp TCTTTTGAAACATGGTCTTCAGAGTGTAATCTGGTCTaGCTTCAACTGGCTCTCCTGCCTCAGTTCCTGACC +
Preference number: 3 (lower is better)
Translates to: SFETWSSECNLV*LQLALLPQFLT
Trigger: GGTCAGGAACTGAGGCAGGAGAGCCAGTTGAAGCCAGACCAGATTACACTCTGAAGACCATGTTTCAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CAA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGCTGTCAGGGTCAGCGTaGAAAATGAGTGAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: KKQDQTPKHYSHICHYERLSGSA*KMSEER
Trigger: CCTCTCCTCACTCATTTTCAACGCTGACCCTGACAG...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAACTGTCAGGGTCAGCGTaGAAAATGAGTGAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKLSGSA*KMSEER
Trigger: CCTCTCCTCACTCATTTTCAACGCTGACCCTGACAG...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 72 bp AACAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTaGTTACACAGCCTGGAATCCCTGACTGAAATGGTT +
Preference number: 3 (lower is better)
Translates to: NKKGKHSPTRPQ*LHSLESLTEMV
Trigger: AACCATTTCAGTCAGGGATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
3UTR TCA 72 bp GTAATGAAGAAAGGGAGGCTTTCACGCGGAGAACTGTaGCCTTCACGACTTCAGCATCTGTCTGAAGTACAA +
Preference number: 3 (lower is better)
Translates to: VMKKGRLSRGEL*PSRLQHLSEVQ
Trigger: TTGTACTTCAGACAGATGCTGAAGTCGTGAAGGTCACAGTTCTCCGCGTGAAAGCCTCCCTTTCTTCATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 72 bp TGGAACAGTCTTCAAAGTGTGAAGTCTGCTGCAGGCTaGCTTCTTTATCACATGCTGGCTTCTCTTGGATTG +
Preference number: 3 (lower is better)
Translates to: WNSLQSVKSAAG*LLYHMLASLGL
Trigger: CAATCCAAGAGAAGCCAGCATGTGATAAAGAAGCCAGCCTGCAGCAGACTTCACACTTTGAAGACTGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR CCA 72 bp CTTTCTCTTTTGAAACATGGTCTTCAGAGTGTAATCTaGTCTGGCTTCAACTGGCTCTCCTGCCTCAGTTCC +
Preference number: 3 (lower is better)
Translates to: LSLLKHGLQSVI*SGFNWLSCLSS
Trigger: GGAACTGAGGCAGGAGAGCCAGTTGAAGCCAGACCAGATTACACTCTGAAGACCATGTTTCAAAAGAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CAA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCTGTCAGGGTCAGCGTaGAAAATGAGTGAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYLSGSA*KMSEER
Trigger: CCTCTCCTCACTCATTTTCAACGCTGACCCTGACAG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTCTGTCAGGGTCAGCGTaGAAAATGAGTGAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: SSFQPRIRILLIFQADVCLSGSA*KMSEER
Trigger: CCTCTCCTCACTCATTTTCAACGCTGACCCTGACAG...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp CTAAGACCTTTCAGACCCAAGCATCAGACGTGCTGTCTTTCTGCATCCTTGCAGCTAGTTTTGAGTGCTTaGTCAAATATCAGCCAGGAT +
Preference number: 3 (lower is better)
Translates to: LRPFRPKHQTCCLSASLQLVLSA*SNISQD
Trigger: ATCCTGGCTGATATTTGACAAAGCACTCAAAACTAG...CTGCAAGGATGCAGAAAGACAGCACGTCTGATGCTTGGGTCTGAAAGGTCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 72 bp ATTGATTACTTGTTATATACAAGGCAAGCTGGTTCCTaGGATCCACAGGTGGCAGGCGGCAAACAAAGAACA +
Preference number: 3 (lower is better)
Translates to: IDYLLYTRQAGS*DPQVAGGKQRT
Trigger: TGTTCTTTGTTTGCCGCCTGCCACCTGTGGATCCCAGGAACCAGCTTGCCTTGTATATAACAAGTAATCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 72 bp CAAAGAGATGCCTCTGTATCAGGACTAAGCAATTACTaGGTGCAGACAGTATTCTCTAGGCAGGCATCTCAA +
Preference number: 3 (lower is better)
Translates to: QRDASVSGLSNY*VQTVFSRQASQ
Trigger: TTGAGATGCCTGCCTAGAGAATACTGTCTGCACCCAGTAATTGCTTAGTCCTGATACAGAGGCATCTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CAA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTGGTGTATGAAGTTTTaGTGTCATCCAAAGGGCACG +
Preference number: 3 (lower is better)
Translates to: KKQDQTPKHYSHICHYERWCMKF*CHPKGT
Trigger: CGTGCCCTTTGGATGACACAAAAACTTCATACACCA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp GGCTGTCTGCACTCAGGGATTAGGCATATAGTGATCAAATGTGTCTCAGTACAATCCCTGCATTCAGGATaGATAAGCAAAGCTATGGAG +
Preference number: 3 (lower is better)
Translates to: GCLHSGIRHIVIKCVSVQSLHSG*ISKAME
Trigger: CTCCATAGCTTTGCTTATCAATCCTGAATGCAGGGA...TTGTACTGAGACACATTTGATCACTATATGCCTAATCCCTGAGTGCAGACAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR TCA 72 bp TTAATCTGTACTCCAGGACTTTTAAAGGTAGGTGTCTaGAATTTTCTACCCTGGATAGAGGCCACGGGACAC +
Preference number: 3 (lower is better)
Translates to: LICTPGLLKVGV*NFLPWIEATGH
Trigger: GTGTCCCGTGGCCTCTATCCAGGGTAGAAAATTTCAGACACCTACCTTTAAAAGTCCTGGAGTACAGATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR TCA 72 bp AAGCAAGCGACGTCATGCAAGGTTAATAGAGTAAGGTaGGAAACCACCAATGTAGCATCTAAGTGGTGCTCT +
Preference number: 3 (lower is better)
Translates to: KQATSCKVNRVR*ETTNVASKWCS
Trigger: AGAGCACCACTTAGATGCTACATTGGTGGTTTCTCACCTTACTCTATTAACCTTGCATGACGTCGCTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR TCA 72 bp TCAGATTCTGGTGTCAAGGTCACAAAGAGCAGGGAGTaGATAGTTAGTAATGAAGAAAGGGAGGCTTTCACG +
Preference number: 3 (lower is better)
Translates to: SDSGVKVTKSRE*IVSNEEREAFT
Trigger: CGTGAAAGCCTCCCTTTCTTCATTACTAACTATTCACTCCCTGCTCTTTGTGACCTTGACACCAGAATCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 72 bp CTCATTACGGATGGTGGTGAGCCATCATGTAGTTACTaGGATTTGAACTCAGGACTTTTGGAAGAACAGTCT +
Preference number: 3 (lower is better)
Translates to: LITDGGEPSCSY*DLNSGLLEEQS
Trigger: AGACTGTTCTTCCAAAAGTCCTGAGTTCAAATCCCAGTAACTACATGATGGCTCACCACCATCCGTAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CAA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATGGTGTATGAAGTTTTaGTGTCATCCAAAGGGCACG +
Preference number: 3 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKWCMKF*CHPKGT
Trigger: CGTGCCCTTTGGATGACACAAAAACTTCATACACCA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR-3UTR CAA 90 bp ATCAGCTCTGTTCAATATCAGGACTTGGTATCCATTTATCAGCAGCTTTACCAATCGGTGGTTTTAGTCTaGACATGTCAGATGAGCACC +
Preference number: 3 (lower is better)
Translates to: ISSVQYQDLVSIYQQLYQSVVLV*TCQMST
Trigger: GGTGCTCATCTGACATGTCAAGACTAAAACCACCGA...TTGGTAAAGCTGCTGATAAATGGATACCAAGTCCTGATATTGAACAGAGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR GCA 72 bp GAATTCTCTATGCATGAAAAGACAGCATTTAACCTCTaGGTGATTCTTCTCCACACCAGGCCGAATAAAGTT +
Preference number: 3 (lower is better)
Translates to: EFSMHEKTAFNL*VILLHTRPNKV
Trigger: AACTTTATTCGGCCTGGTGTGGAGAAGAATCACGCAGAGGTTAAATGCTGTCTTTTCATGCATAGAGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CCA 72 bp AGCCCATGCTCATCAGCTCTGTTCAATATCAGGACTTaGTATCCATTTATCAGCAGCTTTACCAATAAGAAG +
Preference number: 3 (lower is better)
Translates to: SPCSSALFNIRT*YPFISSFTNKK
Trigger: CTTCTTATTGGTAAAGCTGCTGATAAATGGATACCAAGTCCTGATATTGAACAGAGCTGATGAGCATGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR-3UTR CAA 90 bp GCTGGAACAGCTGATGTTTGTCCTCTGATAACTATGACTATATCTTTTGAGCCCAATCTAGCCTGGTCCTaGCTTCTTTTTCCAGTTTTT +
Preference number: 3 (lower is better)
Translates to: AGTADVCPLITMTISFEPNLAWS*LLFPVF
Trigger: AAAAACTGGAAAAAGAAGCAAGGACCAGGCTAGATT...GGGCTCAAAAGATATAGTCATAGTTATCAGAGGACAAACATCAGCTGTTCCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR TCA 72 bp CAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTaGCAGTTTCTGTATCACAATATAGAGGACATCCGC +
Preference number: 3 (lower is better)
Translates to: QSVLKTVHRAKS*QFLYHNIEDIR
Trigger: GCGGATGTCCTCTATATTGTGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
3UTR TCA 72 bp AAGACCTCAGTGATTACACAGCCTGGAATCCCTGACTaGAATGGTTATGATTACCATGAAGGTTTATATACT +
Preference number: 3 (lower is better)
Translates to: KTSVITQPGIPD*NGYDYHEGLYT
Trigger: AGTATATAAACCTTCATGGTAATCATAACCATTTCAGTCAGGGATTCCAGGCTGTGTAATCACTGAGGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
3UTR TCA 72 bp AAGATCTCTGAAGATCCTCGCTACACTTCAGAACATTaGACAGTACCATTGGCTCACACTAAACTTTTAATG +
Preference number: 3 (lower is better)
Translates to: KISEDPRYTSEH*TVPLAHTKLLM
Trigger: CATTAAAAGTTTAGTGTGAGCCAATGGTACTGTTCAATGTTCTGAAGTGTAGCGAGGATCTTCAGAGATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR TCA 72 bp CATTACTTCCTGAAACATGGTGCAGAGTTGTTCTCATaGGGTAGATTTGTCTGTTTGAATGTAGGTGGAAAT +
Preference number: 3 (lower is better)
Translates to: HYFLKHGAELFS*GRFVCLNVGGN
Trigger: ATTTCCACCTACATTCAAACAGACAAATCTACCTCATGAGAACAACTCTGCACCATGTTTCAGGAAGTAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR GCA 72 bp GATGTACAATATAGAAACTGGGCTTATTCCCAAGTGTaGGCTGCTCAGAGAACACCATATGAATTTATTAAG +
Preference number: 3 (lower is better)
Translates to: DVQYRNWAYSQV*AAQRTPYEFIK
Trigger: CTTAATAAATTCATATGGTGTTCTCTGAGCAGCGCACACTTGGGAATAAGCCCAGTTTCTATATTGTACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR TCA 72 bp ACCAGTCTTGGTAATACATTCCGGACTGAAAATAGTTaGTCAATAGCTATGGTAAAGGAAAACCAAACCAAA +
Preference number: 3 (lower is better)
Translates to: TSLGNTFRTENS*SIAMVKENQTK
Trigger: TTTGGTTTGGTTTTCCTTTACCATAGCTATTGATCAACTATTTTCAGTCCGGAATGTATTACCAAGACTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CAA 72 bp GGAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTaGCTTACTCCCCTTCAGCCCCCAGCCACGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GGRRLPWLPTLL*LTPLQPPATAD
Trigger: GTCAGCCGTGGCTGGGGGCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCGCTTGTCCCACTCGCTaGGCCGTGGTTCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPAACPTR*AVVRVP
Trigger: CGGTACCCGAACCACGGCCCAGCGAGTGGGACAAGC...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCAGCTTGTCCCACTCGCTaGGCCGTGGTTCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSACPTR*AVVRVP
Trigger: CGGTACCCGAACCACGGCCCAGCGAGTGGGACAAGC...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
3UTR CAA 72 bp GTGGCACATGCACCTGAGTGCCGCGCTGGCAGAGGCTaGAGGCGCGGCATCCCTCCTGGAGCTGGAGTTACA +
Preference number: 4 (lower is better)
Translates to: VAHAPECRAGRG*RRGIPPGAGVT
Trigger: TGTAACTCCAGCTCCAGGAGGGATGCCGCGCCTCAAGCCTCTGCCAGCGCGGCACTCAGGTGCATGTGCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCACTCCATCGAGGCTCCTaGACGCCCGCTTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSLHRGS*TPACLL
Trigger: CAGCAAGCAAGCGGGCGTCCAGGAGCCTCGATGGAG...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCACTCTGAGCAATGGCTaGGGCAGAGGTGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPATLSNG*GRGGPR
Trigger: CCTCGGCCCACCTCTGCCCCAGCCATTGCTCAGAGT...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCGCTTGTCCCACTCGCTaGGCCGTGGTTCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSACPTR*AVVRVP
Trigger: CGGTACCCGAACCACGGCCCAGCGAGTGGGACAAGC...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCGCTTGTCCCACTCGCTaGGCCGTGGTTCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSACPTR*AVVRVP
Trigger: CGGTACCCGAACCACGGCCCAGCGAGTGGGACAAGC...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCGGGCACTGGCTTGCCTaGTCTGAGCTTGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSGHWLA*SELESG
Trigger: GCCGGACTCAAGCTCAGACCAGGCAAGCCAGTGCCC...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGACTCCATCGAGGCTCCTaGACGCCCGCTTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGLHRGS*TPACLL
Trigger: CAGCAAGCAAGCGGGCGTCCAGGAGCCTCGATGGAG...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCCCTTCCATGCTTCTGTaGGCTCCGGCTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSPSMLL*APAQRA
Trigger: AGCCCGCTGAGCCGGAGCCCACAGAAGCATGGAAGG...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCTCTTCCATGCTTCTGTaGGCTCCGGCTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPASSMLL*APAQRA
Trigger: AGCCCGCTGAGCCGGAGCCCACAGAAGCATGGAAGA...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105970.8
ENSMUST00000137846.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGACCCCTGGCCCTTCTGTaGCCTGACTCTGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGPLALL*PDSEQW
Trigger: CCATTGCTCAGAGTCAGGTCACAGAAGGGCCAGGGG...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGAGAGGACTTCGGTCTGTaGACTCAGCAGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGEDFGL*TQQLLL
Trigger: GAGCAGCAGCTGCTGAGTCCACAGACCGAAGTCCTC...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCCTTCCATGCTTCTGTaGGCTCCGGCTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAPSMLL*APAQRA
Trigger: AGCCCGCTGAGCCGGAGCCCACAGAAGCATGGAAGG...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGGCTTGTCCCACTCGCTaGGCCGTGGTTCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEACPTR*AVVRVP
Trigger: CGGTACCCGAACCACGGCCCAGCGAGTGGGACAAGC...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTCTTCCATGCTTCTGTaGGCTCCGGCTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSSSMLL*APAQRA
Trigger: AGCCCGCTGAGCCGGAGCCCACAGAAGCATGGAAGA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105970.8
ENSMUST00000137846.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGAGAGGCCTCCTCCAGCTaGGTTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGEASSS*VSCWPE
Trigger: CTCAGGCCAACAAGAAACTCAGCTGGAGGAGGCCTC...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCCCCTGGCCCTTCTGTaGCCTGACTCTGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAPLALL*PDSEQW
Trigger: CCATTGCTCAGAGTCAGGTCACAGAAGGGCCAGGGG...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR GCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCTGCAAGCTTCTTCCATaGTTCTGTGGGCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPACKLLP*FCGLRL
Trigger: GAGCCGGAGCCCACAGAAGCATGGAAGAAGCTTGCA...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146443.8
CDS-3UTR CCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCCATGCCGTGCAGTTCTaGGTCATAGTCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPAHAVQF*VIVSQL
Trigger: GAGCTGGGAGACTATGACCCAGAACTGCACGGCATG...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGGGGCACTGGCTTGCCTaGTCTGAGCTTGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWGHWLA*SELESG
Trigger: GCCGGACTCAAGCTCAGACCAGGCAAGCCAGTGCCC...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGGGGCACTGGCTTGCCTaGTCTGAGCTTGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEGHWLA*SELESG
Trigger: GCCGGACTCAAGCTCAGACCAGGCAAGCCAGTGCCC...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCGAGGACTTCGGTCTGTaGACTCAGCAGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSEDFGL*TQQLLL
Trigger: GAGCAGCAGCTGCTGAGTCCACAGACCGAAGTCCTC...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGACTCTGAGCAATGGCTaGGGCAGAGGTGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWTLSNG*GRGGPR
Trigger: CCTCGGCCCACCTCTGCCCCAGCCATTGCTCAGAGT...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGACTCTGAGCAATGGCTaGGGCAGAGGTGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAETLSNG*GRGGPR
Trigger: CCTCGGCCCACCTCTGCCCCAGCCATTGCTCAGAGT...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGCCTTCCATGCTTCTGTaGGCTCCGGCTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKPSMLL*APAQRA
Trigger: AGCCCGCTGAGCCGGAGCCCACAGAAGCATGGAAGG...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGCCTTCCATGCTTCTGTaGGCTCCGGCTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEPSMLL*APAQRA
Trigger: AGCCCGCTGAGCCGGAGCCCACAGAAGCATGGAAGG...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCTGTTTCTGTGTCTTCTaGCGGGCTTCTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPACFCVF*RASGRL
Trigger: AAGCCTCCCAGAAGCCCGTCAGAAGACACAGAAACA...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
CDS-3UTR TCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGCCCCTGGCCCTTCTGTaGCCTGACTCTGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWPLALL*PDSEQW
Trigger: CCATTGCTCAGAGTCAGGTCACAGAAGGGCCAGGGG...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCGACCACCTTGGTCACTaGCATGTCTGGATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSDHLGH*HVWMLL
Trigger: GAGCAGCATCCAGACATGTCAGTGACCAAGGTGGTC...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCATTTTTCCACCTTCCATaGTTCTGTGGGCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSFFHLP*FCGLRL
Trigger: GAGCCGGAGCCCACAGAAGCATGGAAGGTGGAAAAA...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030739.11
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCAGTTGGCCTGAGTTTGTaGCTCCCTCTCCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSVGLSL*LPLLLP
Trigger: AGGAAGAAGGAGAGGGAGCCACAAACTCAGGCCAAC...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCGTTGGCCTGAGTTTGTaGCTCCCTCTCCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPAVGLSL*LPLLLP
Trigger: AGGAAGAAGGAGAGGGAGCCACAAACTCAGGCCAAC...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGACATGCCGTGCAGTTCTaGGTCATAGTCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGHAVQF*VIVSQL
Trigger: GAGCTGGGAGACTATGACCCAGAACTGCACGGCATG...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCCATGCCGTGCAGTTCTaGGTCATAGTCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSHAVQF*VIVSQL
Trigger: GAGCTGGGAGACTATGACCCAGAACTGCACGGCATG...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTGGGCACTGGCTTGCCTaGTCTGAGCTTGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATGHWLA*SELESG
Trigger: GCCGGACTCAAGCTCAGACCAGGCAAGCCAGTGCCC...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCTGTCAATCAGGGCACTaGCTTGCCTGGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPACQSGH*LAWSEL
Trigger: AAGCTCAGACCAGGCAAGCCAGTGCCCTGATTGACA...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCATGTCAATCAGGGCACTaGCTTGCCTGGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSCQSGH*LAWSEL
Trigger: AAGCTCAGACCAGGCAAGCCAGTGCCCTGATTGACA...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGGAGGACTTCGGTCTGTaGACTCAGCAGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAEDFGL*TQQLLL
Trigger: GAGCAGCAGCTGCTGAGTCCACAGACCGAAGTCCTC...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGATTTGATAGGTGCCCCTaGCCCTTCTGTGACCTGACT +
Preference number: 4 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGFDRCP*PFCDLT
Trigger: AGTCAGGTCACAGAAGGGCCAGGGGCACCTATCAAA...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCATTTGATAGGTGCCCCTaGCCCTTCTGTGACCTGACT +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSFDRCP*PFCDLT
Trigger: AGTCAGGTCACAGAAGGGCCAGGGGCACCTATCAAA...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTCCTTCCATGCTTCTGTaGGCTCCGGCTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATPSMLL*APAQRA
Trigger: AGCCCGCTGAGCCGGAGCCCACAGAAGCATGGAAGG...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAGCTTGTCCCACTCGCTaGGCCGTGGTTCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTACPTR*AVVRVP
Trigger: CGGTACCCGAACCACGGCCCAGCGAGTGGGACAAGC...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCAATGAGGGTGGGGAACTaGTTACCCACAGGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSMRVGN*LPTGES
Trigger: TGACTCACCTGTGGGTAACCAGTTCCCCACCCTCAT...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCAGTTTCTTGTTGGCCTaGGTTTGTGGCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSSFLLA*VCGSLS
Trigger: GGAGAGGGAGCCACAAACTCAGGCCAACAAGAAACT...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGAGGCCTCCTCCAGCTaGGTTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKEASSS*VSCWPE
Trigger: CTCAGGCCAACAAGAAACTCAGCTGGAGGAGGCCTC...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGGAGGCCTCCTCCAGCTaGGTTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWEASSS*VSCWPE
Trigger: CTCAGGCCAACAAGAAACTCAGCTGGAGGAGGCCTC...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGACAGGCCTCTGCTTTCTaGTGTCCGTTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGQASAF*CPFLVL
Trigger: AAGAACAAGGAACGGACATCAGAAAGCAGAGGCCTG...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGAAATTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAATT...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTCCCCTGGCCCTTCTGTaGCCTGACTCTGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATPLALL*PDSEQW
Trigger: CCATTGCTCAGAGTCAGGTCACAGAAGGGCCAGGGG...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCGCTTGTACAAGGACCTaGTCATGGTCGATATCGGCA +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPAACTRT*SWSISA
Trigger: TGCCGATATCGACCATGATCAGGTCCTTGTACAAGC...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCGCTCCTTGGCTTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSAPWLP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGC...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCGCTCCTTGGCTTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSAPWLP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGC...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGAGCTCCTTGGCTTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGAPWLP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGC...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGGACCACCTTGGTCACTaGCATGTCTGGATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRADHLGH*HVWMLL
Trigger: GAGCAGCATCCAGACATGTCAGTGACCAAGGTGGTC...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCATCTGGAAACTTCGAATaGGGGTGGGGAACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSSGNFE*GWGTGY
Trigger: GTAACCAGTTCCCCACCCTCATTCGAAGTTTCCAGA...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCTCTTCTTCAGAGACCTaGGACTTGGGCCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPASSSET*DLGLLR
Trigger: CCTCAAAAGGCCCAAGTCGCAGGTCTCTGAAGAAGA...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCACCAGGGCAAGAAACTTaGTTTTGGGGATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSPGQET*FWGWCL
Trigger: CAGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGG...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR GCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCAACTGACATGTCTGGATaGTGCTCCTTGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSTDMSG*CSLASL
Trigger: CAAGGAAGCCAAGGAGCAGCATCCAGACATGTCAGT...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGGGTCTCAAGGGTCTCTaGTGCTGCACCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEGLKGL*CCTQLF
Trigger: GAAGAGCTGGGTGCAGCAGCAGAGACCCTTGAGACC...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGATGTCCGCTCAAAGTGTaGAGCAGGCCTGTCAATCAG +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGCPLKV*SRPVNQ
Trigger: CTGATTGACAGGCCTGCTCCACACTTTGAGCGGACA...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTGTCCGCTCAAAGTGTaGAGCAGGCCTGTCAATCAG +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSCPLKV*SRPVNQ
Trigger: CTGATTGACAGGCCTGCTCCACACTTTGAGCGGACA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACACTCCATCGAGGCTCCTaGACGCCCGCTTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTLHRGS*TPACLL
Trigger: CAGCAAGCAAGCGGGCGTCCAGGAGCCTCGATGGAG...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGGAGGACTTCGGTCTGTaGACTCAGCAGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEEDFGL*TQQLLL
Trigger: GAGCAGCAGCTGCTGAGTCCACAGACCGAAGTCCTC...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAGCTTGTCCCACTCGCTaGGCCGTGGTTCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIACPTR*AVVRVP
Trigger: CGGTACCCGAACCACGGCCCAGCGAGTGGGACAAGC...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCATCTCTGTCTCCTGGTaGACGACCACCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSISVSW*TTTLVT
Trigger: AGTGACCAAGGTGGTCGTCCACCAGGAGACAGAGAT...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTCTTCCATGCTTCTGTaGGCTCCGGCTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATSSMLL*APAQRA
Trigger: AGCCCGCTGAGCCGGAGCCCACAGAAGCATGGAAGA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000105970.8
ENSMUST00000137846.8
ENSMUST00000146443.8
CDS-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGGGCAGGGTAGGTGGATaGCCCTTTTGTCACGGTAGC +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEGRVGG*PFCHGS
Trigger: GCTACCGTGACAAAAGGGCCATCCACCTACCCTGCC...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS-3UTR CCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCCACCGAGTTGCAGCTaGCAGGAAGCTGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAPPSCS*QEAGVT
Trigger: AGTAACTCCAGCTTCCTGCCAGCTGCAACTCGGTGG...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGATTCTGTTGCTGGTGCTaGGAATTCTCAGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGFCCWC*EFSASA
Trigger: GGCTGAAGCTGAGAATTCTCAGCACCAGCAACAGAA...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTTCTGTTGCTGGTGCTaGGAATTCTCAGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSFCCWC*EFSASA
Trigger: GGCTGAAGCTGAGAATTCTCAGCACCAGCAACAGAA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGAGTTTCTTGTTGGCCTaGGTTTGTGGCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRASFLLA*VCGSLS
Trigger: GGAGAGGGAGCCACAAACTCAGGCCAACAAGAAACT...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGACAGGCCTCTGCTTTCTaGTGTCCGTTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGQASAF*CPFLVL
Trigger: AAGAACAAGGAACGGACATCAGAAAGCAGAGGCCTG...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGTGTTTCTGTGTCTTCTaGCGGGCTTCTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRACFCVF*RASGRL
Trigger: AAGCCTCCCAGAAGCCCGTCAGAAGACACAGAAACA...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
CDS-3UTR TCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGAATTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRANSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAATT...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCAGATAACTGGGGAGCTTaGAGCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSDNWGA*SRWYFH
Trigger: ATGAAAGTACCATCGGCTTCAAGCTCCCCAGTTATC...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGAGATAACTGGGGAGCTTaGAGCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGDNWGA*SRWYFH
Trigger: ATGAAAGTACCATCGGCTTCAAGCTCCCCAGTTATC...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCCCCTGGCCCTTCTGTaGCCTGACTCTGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPPLALL*PDSEQW
Trigger: CCATTGCTCAGAGTCAGGTCACAGAAGGGCCAGGGG...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCGCTTGTACAAGGACCTaGTCATGGTCGATATCGGCA +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSACTRT*SWSISA
Trigger: TGCCGATATCGACCATGATCAGGTCCTTGTACAAGC...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGAGCTTGTACAAGGACCTaGTCATGGTCGATATCGGCA +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGACTRT*SWSISA
Trigger: TGCCGATATCGACCATGATCAGGTCCTTGTACAAGC...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCGCTTGTACAAGGACCTaGTCATGGTCGATATCGGCA +
Preference number: 4 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSACTRT*SWSISA
Trigger: TGCCGATATCGACCATGATCAGGTCCTTGTACAAGC...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGACCACCTTGGTCACTaGCATGTCTGGATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKDHLGH*HVWMLL
Trigger: GAGCAGCATCCAGACATGTCAGTGACCAAGGTGGTC...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGGACCACCTTGGTCACTaGCATGTCTGGATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEDHLGH*HVWMLL
Trigger: GAGCAGCATCCAGACATGTCAGTGACCAAGGTGGTC...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGTTTTTCCACCTTCCATaGTTCTGTGGGCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAFFHLP*FCGLRL
Trigger: GAGCCGGAGCCCACAGAAGCATGGAAGGTGGAAAAA...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030739.11
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGATCTCCAGTAGGGACTTaGCCGTTGATGTTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGSPVGT*PLMLRV
Trigger: GACTCTTAACATCAACGGGCAAGTCCCTACTGGAGA...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR GCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCACTGACATGTCTGGATaGTGCTCCTTGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSTDMSG*CSLASL
Trigger: CAAGGAAGCCAAGGAGCAGCATCCAGACATGTCAGT...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTTTTCCCCACCGAGTTaGAGCTGGCAGGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEFSPPS*SWQEAG
Trigger: TCCAGCTTCCTGCCAGCTGCAACTCGGTGGGGAAAA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGACAAGTCTTCATGTGTTaGAGTGTCCCCATTGGATGC +
Preference number: 4 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGQVFMC*SVPIGC
Trigger: GCATCCAATGGGGACACTCCAACACATGAAGACTTG...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCAGTGTTCTTCCTGAGCTaGCTGTGTCTCTATACTGCT +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSVFFLS*LCLYTA
Trigger: AGCAGTATAGAGACACAGCCAGCTCAGGAAGAACAC...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAGGGCACTGGCTTGCCTaGTCTGAGCTTGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIGHWLA*SELESG
Trigger: GCCGGACTCAAGCTCAGACCAGGCAAGCCAGTGCCC...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAACTCTGAGCAATGGCTaGGGCAGAGGTGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRITLSNG*GRGGPR
Trigger: CCTCGGCCCACCTCTGCCCCAGCCATTGCTCAGAGT...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAACTCTGAGCAATGGCTaGGGCAGAGGTGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISTLSNG*GRGGPR
Trigger: CCTCGGCCCACCTCTGCCCCAGCCATTGCTCAGAGT...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAGATGGCAGCTTGTCCCACTCGCTaGGCCGTGGTTCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: PFLPCIPVSCYPRSRQMAACPTR*AVVRVP
Trigger: CGGTACCCGAACCACGGCCCAGCGAGTGGGACAAGC...TGCCATCTGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGATCTCTGTCTCCTGGTaGACGACCACCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAISVSW*TTTLVT
Trigger: AGTGACCAAGGTGGTCGTCCACCAGGAGACAGAGAT...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCATTTACCAGAGGAGGCTaGAAACTTCGAATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSFTRGG*KLRMRV
Trigger: CACCCTCATTCGAAGTTTCCAGCCTCCTCTGGTAAA...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS-3UTR TCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGAGTTTCTTGTTGGCCTaGGTTTGTGGCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKSFLLA*VCGSLS
Trigger: GGAGAGGGAGCCACAAACTCAGGCCAACAAGAAACT...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCAGGCCTCTGCTTTCTaGTGTCCGTTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAQASAF*CPFLVL
Trigger: AAGAACAAGGAACGGACATCAGAAAGCAGAGGCCTG...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCATGGGGGCCTTTAAAATaGTGTCTTCATCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSWGPLK*CLHQGC
Trigger: ACAGCCTTGATGAAGACATCATTTTAAAGGCCCCCA...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGTGTTTCTGTGTCTTCTaGCGGGCTTCTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWCFCVF*RASGRL
Trigger: AAGCCTCCCAGAAGCCCGTCAGAAGACACAGAAACA...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
CDS-3UTR TCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGAATTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAATT...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCGATAACTGGGGAGCTTaGAGCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSDNWGA*SRWYFH
Trigger: ATGAAAGTACCATCGGCTTCAAGCTCCCCAGTTATC...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCACCCCTGGCCCTTCTGTaGCCTGACTCTGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISPLALL*PDSEQW
Trigger: CCATTGCTCAGAGTCAGGTCACAGAAGGGCCAGGGG...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCAGCATTGGCAGTATCTaGGATGGTGACAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPASIGSI*DGDSLS
Trigger: ACTCAAACTGTCACCATCTCAGATACTGCCAATGCT...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCATATCGGCATCTCCTGTaGTCACAATTCTCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSYRHLL*SQFSSR
Trigger: TCGAGAAGAGAATTGTGATCACAGGAGATGCCGATA...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGCTCCTTGGCTTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKAPWLP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGC...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGGCTCCTTGGCTTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWAPWLP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGC...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGACCACCTTGGTCACTaGCATGTCTGGATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQDHLGH*HVWMLL
Trigger: GAGCAGCATCCAGACATGTCAGTGACCAAGGTGGTC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTGACCACCTTGGTCACTaGCATGTCTGGATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATDHLGH*HVWMLL
Trigger: GAGCAGCATCCAGACATGTCAGTGACCAAGGTGGTC...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGGTCGTGACAGGCCTCTaGTTTCTGATGTCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWVVTGL*FLMSVP
Trigger: AGGAACGGACATCAGAAAGCAGAGGCCTGTCACGAC...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCCAGGGCAAGAAACTTaGTTTTGGGGATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAPGQET*FWGWCL
Trigger: CAGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGG...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR GCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGAATCTTCACCTTTTCCTaGAAGCTTCTGCGTTTGGTC +
Preference number: 4 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGIFTFS*KLLRLV
Trigger: GACCAAACGCAGAAGCTTGCAGGAAAAGGTGAAGAT...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000030739.11
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGACTGACATGTCTGGATaGTGCTCCTTGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRATDMSG*CSLASL
Trigger: CAAGGAAGCCAAGGAGCAGCATCCAGACATGTCAGT...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAGGTCTCAAGGGTCTCTaGTGCTGCACCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTGLKGL*CCTQLF
Trigger: GAAGAGCTGGGTGCAGCAGCAGAGACCCTTGAGACC...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGACAAGTCTTCATGTGTTaGAGTGTCCCCATTGGATGC +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGQVFMC*SVPIGC
Trigger: GCATCCAATGGGGACACTCCAACACATGAAGACTTG...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCACCTGAGCTGGAGTCATaGACCTGTATGATTTATGCA +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSPELES*TCMIYA
Trigger: TGCATAAATCATACAGGTCCATGACTCCAGCTCAGG...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGTGTCAATCAGGGCACTaGCTTGCCTGGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWCQSGH*LAWSEL
Trigger: AAGCTCAGACCAGGCAAGCCAGTGCCCTGATTGACA...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTGTCAATCAGGGCACTaGCTTGCCTGGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAECQSGH*LAWSEL
Trigger: AAGCTCAGACCAGGCAAGCCAGTGCCCTGATTGACA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGTGTCCGCTCAAAGTGTaGAGCAGGCCTGTCAATCAG +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKCPLKV*SRPVNQ
Trigger: CTGATTGACAGGCCTGCTCCACACTTTGAGCGGACA...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAGATGGCACTCCATCGAGGCTCCTaGACGCCCGCTTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PFLPCIPVSCYPRSRQMALHRGS*TPACLL
Trigger: CAGCAAGCAAGCGGGCGTCCAGGAGCCTCGATGGAG...TGCCATCTGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp CCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAGATGGCAACTCTGAGCAATGGCTaGGGCAGAGGTGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PFLPCIPVSCYPRSRQMATLSNG*GRGGPR
Trigger: CCTCGGCCCACCTCTGCCCCAGCCATTGCTCAGAGT...TGCCATCTGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTTTGATAGGTGCCCCTaGCCCTTCTGTGACCTGACT +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEFDRCP*PFCDLT
Trigger: AGTCAGGTCACAGAAGGGCCAGGGGCACCTATCAAA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCCTTCCATGCTTCTGTaGGCTCCGGCTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PQLVNLDLFFPASLYPAIPSMLL*APAQRA
Trigger: AGCCCGCTGAGCCGGAGCCCACAGAAGCATGGAAGG...GATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTCGGATGTGATGGTCTaGGCTGTCAGCAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAESDVMV*AVSKTP
Trigger: TGGAGTCTTGCTGACAGCCCAGACCATCACATCCGA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGTCGGATGTGATGGTCTaGGCTGTCAGCAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWSDVMV*AVSKTP
Trigger: TGGAGTCTTGCTGACAGCCCAGACCATCACATCCGA...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGATCTCTGTCTCCTGGTaGACGACCACCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWISVSW*TTTLVT
Trigger: AGTGACCAAGGTGGTCGTCCACCAGGAGACAGAGAT...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGTTCTGTTGCTGGTGCTaGGAATTCTCAGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWFCCWC*EFSASA
Trigger: GGCTGAAGCTGAGAATTCTCAGCACCAGCAACAGAA...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAGAGGCCTCCTCCAGCTaGGTTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISEASSS*VSCWPE
Trigger: CTCAGGCCAACAAGAAACTCAGCTGGAGGAGGCCTC...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTGGGGGCCTTTAAAATaGTGTCTTCATCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSWGPLK*CLHQGC
Trigger: ACAGCCTTGATGAAGACATCATTTTAAAGGCCCCCA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTGTTTCTGTGTCTTCTaGCGGGCTTCTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATCFCVF*RASGRL
Trigger: AAGCCTCCCAGAAGCCCGTCAGAAGACACAGAAACA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
CDS-3UTR TCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTAATTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAATT...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCCCCTGGCCCTTCTGTaGCCTGACTCTGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: PQLVNLDLFFPASLYPAIPLALL*PDSEQW
Trigger: CCATTGCTCAGAGTCAGGTCACAGAAGGGCCAGGGG...GATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR TCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCCAGTATCTGAGATGGTaGCAGTTTGAGTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPAQYLRW*QFESLP
Trigger: TGGTAAAGACTCAAACTGTCACCATCTCAGATACTG...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGACAGTATCTGAGATGGTaGCAGTTTGAGTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGQYLRW*QFESLP
Trigger: TGGTAAAGACTCAAACTGTCACCATCTCAGATACTG...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCACAGTATCTGAGATGGTaGCAGTTTGAGTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSQYLRW*QFESLP
Trigger: TGGTAAAGACTCAAACTGTCACCATCTCAGATACTG...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCAGCATTGGCAGTATCTaGGATGGTGACAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSSIGSI*DGDSLS
Trigger: ACTCAAACTGTCACCATCTCAGATACTGCCAATGCT...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCAGCATTGGCAGTATCTaGGATGGTGACAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSSIGSI*DGDSLS
Trigger: ACTCAAACTGTCACCATCTCAGATACTGCCAATGCT...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTATCGGCATCTCCTGTaGTCACAATTCTCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSYRHLL*SQFSSR
Trigger: TCGAGAAGAGAATTGTGATCACAGGAGATGCCGATA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGATATCGGCATCTCCTGTaGTCACAATTCTCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGYRHLL*SQFSSR
Trigger: TCGAGAAGAGAATTGTGATCACAGGAGATGCCGATA...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGCTTGTACAAGGACCTaGTCATGGTCGATATCGGCA +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKACTRT*SWSISA
Trigger: TGCCGATATCGACCATGATCAGGTCCTTGTACAAGC...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGCTCCTTGGCTTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQAPWLP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAGACCACCTTGGTCACTaGCATGTCTGGATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTDHLGH*HVWMLL
Trigger: GAGCAGCATCCAGACATGTCAGTGACCAAGGTGGTC...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTCTGGTTACCCACAGGTaGGTCAAGAAAGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATLVTHR*VKKGSA
Trigger: AGCGGATCCTTTCTTGACTCACCTGTGGGTAACCAG...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGCTGGAAACTTCGAATaGGGGTGGGGAACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQAGNFE*GWGTGY
Trigger: GTAACCAGTTCCCCACCCTCATTCGAAGTTTCCAGC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS-3UTR GCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTGTCGTGACAGGCCTCTaGTTTCTGATGTCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATVVTGL*FLMSVP
Trigger: AGGAACGGACATCAGAAAGCAGAGGCCTGTCACGAC...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGCCAGGGCAAGAAACTTaGTTTTGGGGATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKPGQET*FWGWCL
Trigger: CAGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGG...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR GCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGTCTCTTTTTCTTCCATaGTTCTGTGGGCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKSLFLP*FCGLRL
Trigger: GAGCCGGAGCCCACAGAAGCATGGAAGAAAAAGAGA...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000105970.8
ENSMUST00000137846.8
CDS-3UTR GCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGTACTGGGAAACTGAATaGACTGGCCTGTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWYWETE*TGLFLH
Trigger: GTGGAGGAACAGGCCAGTGCATTCAGTTTCCCAGTA...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGTTGGCCTGAGTTTGTaGCTCCCTCTCCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQVGLSL*LPLLLP
Trigger: AGGAAGAAGGAGAGGGAGCCACAAACTCAGGCCAAC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGTTGGAGTGTCCCCATTaGATGCTTTCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRALECPH*MLSASA
Trigger: AGCAGAAGCTGAAAGCATCCAATGGGGACACTCCAA...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCTCCGTTCCTTGTTCTTaGTCAAGTCTTCATGTGTTG +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPASVPCS*SSLHVL
Trigger: CAACACATGAAGACTTGACCAAGAACAAGGAACGGA...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCAATGAAGATCCAAAGATaGGTCTGTTTTGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSMKIQR*VCFELR
Trigger: CCTGAGCTCAAAACAGACCCATCTTTGGATCTTCAT...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCATGAAGATCCAAAGATaGGTCTGTTTTGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPAMKIQR*VCFELR
Trigger: CCTGAGCTCAAAACAGACCCATCTTTGGATCTTCAT...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACACATGCCGTGCAGTTCTaGGTCATAGTCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTHAVQF*VIVSQL
Trigger: GAGCTGGGAGACTATGACCCAGAACTGCACGGCATG...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCGGGCACTGGCTTGCCTaGTCTGAGCTTGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: QERQTQPHKTSVITQPGIGHWLA*SELESG
Trigger: GCCGGACTCAAGCTCAGACCAGGCAAGCCAGTGCCC...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTGTCAATCAGGGCACTaGCTTGCCTGGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQCQSGH*LAWSEL
Trigger: AAGCTCAGACCAGGCAAGCCAGTGCCCTGATTGACA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTGTCCGCTCAAAGTGTaGAGCAGGCCTGTCAATCAG +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQCPLKV*SRPVNQ
Trigger: CTGATTGACAGGCCTGCTCCACACTTTGAGCGGACA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTGTCCGCTCAAAGTGTaGAGCAGGCCTGTCAATCAG +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATCPLKV*SRPVNQ
Trigger: CTGATTGACAGGCCTGCTCCACACTTTGAGCGGACA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CTAAGACCTTTCAGACCCAAGCATCAGACGTGCTGTCTTTCTGCATCCTTGCAGCTCCATCGAGGCTCCTaGACGCCCGCTTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LRPFRPKHQTCCLSASLQLHRGS*TPACLL
Trigger: CAGCAAGCAAGCGGGCGTCCAGGAGCCTCGATGGAG...CTGCAAGGATGCAGAAAGACAGCACGTCTGATGCTTGGGTCTGAAAGGTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CCA 90 bp CTAAGACCTTTCAGACCCAAGCATCAGACGTGCTGTCTTTCTGCATCCTTGCAGACTCTGAGCAATGGCTaGGGCAGAGGTGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LRPFRPKHQTCCLSASLQTLSNG*GRGGPR
Trigger: CCTCGGCCCACCTCTGCCCCAGCCATTGCTCAGAGT...CTGCAAGGATGCAGAAAGACAGCACGTCTGATGCTTGGGTCTGAAAGGTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTTTGATAGGTGCCCCTaGCCCTTCTGTGACCTGACT +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATFDRCP*PFCDLT
Trigger: AGTCAGGTCACAGAAGGGCCAGGGGCACCTATCAAA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTTTGATAGGTGCCCCTaGCCCTTCTGTGACCTGACT +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQFDRCP*PFCDLT
Trigger: AGTCAGGTCACAGAAGGGCCAGGGGCACCTATCAAA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGATCACTGATGCTGGCATaGTGCTTTTTGATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGSLMLA*CFLISS
Trigger: AGAAGAGATCAAAAAGCACCATGCCAGCATCAGTGA...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCTCACTGATGCTGGCATaGTGCTTTTTGATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPASLMLA*CFLISS
Trigger: AGAAGAGATCAAAAAGCACCATGCCAGCATCAGTGA...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCATCACTGATGCTGGCATaGTGCTTTTTGATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSSLMLA*CFLISS
Trigger: AGAAGAGATCAAAAAGCACCATGCCAGCATCAGTGA...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCAAGGGACATCTTTGGTTaGGATTTCACTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSRDIFG*DFTFHS
Trigger: GCTGTGAAAAGTGAAATCCCAACCAAAGATGTCCCT...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGAAGGGACATCTTTGGTTaGGATTTCACTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGRDIFG*DFTFHS
Trigger: GCTGTGAAAAGTGAAATCCCAACCAAAGATGTCCCT...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCACTCTTTTTCTGCGTTTaGTCACCATTTGAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSLFFCV*SPFEVG
Trigger: ACCTACCTCAAATGGTGACCAAACGCAGAAAAAGAG...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105975.8
CDS-3UTR TCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATGTTTCTGTGTCTTCTaGCGGGCTTCTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTCFCVF*RASGRL
Trigger: AAGCCTCCCAGAAGCCCGTCAGAAGACACAGAAACA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
CDS-3UTR TCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCTCAAGTTCCTTGGTCTaGTTTGGAGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPASSSLV*FGASLK
Trigger: TTTTAAACTGGCTCCAAATCAGACCAAGGAACTTGA...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCATCAAGTTCCTTGGTCTaGTTTGGAGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSSSSLV*FGASLK
Trigger: TTTTAAACTGGCTCCAAATCAGACCAAGGAACTTGA...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGATCAAGTTCCTTGGTCTaGTTTGGAGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGSSSLV*FGASLK
Trigger: TTTTAAACTGGCTCCAAATCAGACCAAGGAACTTGA...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTAATTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAATT...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCAAGTCCTTTGCTTTGTaGAGATCAACTCCATACATG +
Preference number: 4 (lower is better)
Translates to: PAVGGHVSGVCDQGACPAKSFAL*RSTPYM
Trigger: CATGTATGGAGTTGATCTTCACAAAGCAAAGGACTT...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGAAAGTCCTTTGCTTTGTaGAGATCAACTCCATACATG +
Preference number: 4 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGKSFAL*RSTPYM
Trigger: CATGTATGGAGTTGATCTTCACAAAGCAAAGGACTT...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGATAACTGGGGAGCTTaGAGCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKDNWGA*SRWYFH
Trigger: ATGAAAGTACCATCGGCTTCAAGCTCCCCAGTTATC...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGCTTGTACAAGGACCTaGTCATGGTCGATATCGGCA +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQACTRT*SWSISA
Trigger: TGCCGATATCGACCATGATCAGGTCCTTGTACAAGC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAGACCACCTTGGTCACTaGCATGTCTGGATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIDHLGH*HVWMLL
Trigger: GAGCAGCATCCAGACATGTCAGTGACCAAGGTGGTC...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTCTTCTTCAGAGACCTaGGACTTGGGCCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQSSSET*DLGLLR
Trigger: CCTCAAAAGGCCCAAGTCGCAGGTCTCTGAAGAAGA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGAAAGGAGACCTTACAGTaGATGTTTCTGTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGKETLQ*MFLCLL
Trigger: CAGAAGACACAGAAACATGCACTGTAAGGTCTCCTT...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
CDS-3UTR GCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCAAGGAGACCTTACAGTaGATGTTTCTGTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSKETLQ*MFLCLL
Trigger: CAGAAGACACAGAAACATGCACTGTAAGGTCTCCTT...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
CDS-3UTR GCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCAAGGAGACCTTACAGTaGATGTTTCTGTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSKETLQ*MFLCLL
Trigger: CAGAAGACACAGAAACATGCACTGTAAGGTCTCCTT...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
CDS-3UTR GCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTCCAGGGCAAGAAACTTaGTTTTGGGGATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATPGQET*FWGWCL
Trigger: CAGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGG...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR GCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTCTCCAGTAGGGACTTaGCCGTTGATGTTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAESPVGT*PLMLRV
Trigger: GACTCTTAACATCAACGGGCAAGTCCCTACTGGAGA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR GCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGTCTCCAGTAGGGACTTaGCCGTTGATGTTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKSPVGT*PLMLRV
Trigger: GACTCTTAACATCAACGGGCAAGTCCCTACTGGAGA...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR GCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGTCTCCAGTAGGGACTTaGCCGTTGATGTTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWSPVGT*PLMLRV
Trigger: GACTCTTAACATCAACGGGCAAGTCCCTACTGGAGA...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR GCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTACTGACATGTCTGGATaGTGCTCCTTGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATTDMSG*CSLASL
Trigger: CAAGGAAGCCAAGGAGCAGCATCCAGACATGTCAGT...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATTTTCCCCACCGAGTTaGAGCTGGCAGGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISFSPPS*SWQEAG
Trigger: TCCAGCTTCCTGCCAGCTGCAACTCGGTGGGGAAAA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTTGGAGTGTCCCCATTaGATGCTTTCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAELECPH*MLSASA
Trigger: AGCAGAAGCTGAAAGCATCCAATGGGGACACTCCAA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGCAAGTCTTCATGTGTTaGAGTGTCCCCATTGGATGC +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWQVFMC*SVPIGC
Trigger: GCATCCAATGGGGACACTCCAACACATGAAGACTTG...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCTCCGTTCCTTGTTCTTaGTCAAGTCTTCATGTGTTG +
Preference number: 4 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSSVPCS*SSLHVL
Trigger: CAACACATGAAGACTTGACCAAGAACAAGGAACGGA...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCATGAAGATCCAAAGATaGGTCTGTTTTGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSMKIQR*VCFELR
Trigger: CCTGAGCTCAAAACAGACCCATCTTTGGATCTTCAT...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CCAGCTCCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTCATGCCGTGCAGTTCTaGGTCATAGTCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PAPQLVNLDLFFPASLYPHAVQF*VIVSQL
Trigger: GAGCTGGGAGACTATGACCCAGAACTGCACGGCATG...AGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGGAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCACATGCCGTGCAGTTCTaGGTCATAGTCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISHAVQF*VIVSQL
Trigger: GAGCTGGGAGACTATGACCCAGAACTGCACGGCATG...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATGTCAATCAGGGCACTaGCTTGCCTGGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTCQSGH*LAWSEL
Trigger: AAGCTCAGACCAGGCAAGCCAGTGCCCTGATTGACA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATTTGATAGGTGCCCCTaGCCCTTCTGTGACCTGACT +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTFDRCP*PFCDLT
Trigger: AGTCAGGTCACAGAAGGGCCAGGGGCACCTATCAAA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGATCACTGATGCTGGCATaGTGCTTTTTGATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGSLMLA*CFLISS
Trigger: AGAAGAGATCAAAAAGCACCATGCCAGCATCAGTGA...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGAAGGGACATCTTTGGTTaGGATTTCACTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGRDIFG*DFTFHS
Trigger: GCTGTGAAAAGTGAAATCCCAACCAAAGATGTCCCT...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTTCGGATGTGATGGTCTaGGCTGTCAGCAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPSDVMV*AVSKTP
Trigger: TGGAGTCTTGCTGACAGCCCAGACCATCACATCCGA...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAATCTCTGTCTCCTGGTaGACGACCACCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTISVSW*TTTLVT
Trigger: AGTGACCAAGGTGGTCGTCCACCAGGAGACAGAGAT...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGAACTACTGACTGTTTaGGGCACTCCCATTCAGAGG +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQELLTV*GTPIQR
Trigger: CCTCTGAATGGGAGTGCCCCAAACAGTCAGTAGTTC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
3UTR CAA 72 bp GGGGAGAGAAAGAGATGCCGTCTGCAGCTTCTTGTATaGGCAGCATTAACTGAAGCCCACCCAGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GERKRCRLQLLV*AALTEAHPGLE
Trigger: TTCCAGCCCTGGGTGGGCTTCAGTTAATGCTGCCAATACAAGAAGCTGCAGACGGCATCTCTTTCTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR TCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATTCTGTTGCTGGTGCTaGGAATTCTCAGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTFCCWC*EFSASA
Trigger: GGCTGAAGCTGAGAATTCTCAGCACCAGCAACAGAA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp CCAGCTCCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTAGTTTCTTGTTGGCCTaGGTTTGTGGCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PAPQLVNLDLFFPASLYPSFLLA*VCGSLS
Trigger: GGAGAGGGAGCCACAAACTCAGGCCAACAAGAAACT...AGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR TCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGTGGGGGCCTTTAAAATaGTGTCTTCATCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWWGPLK*CLHQGC
Trigger: ACAGCCTTGATGAAGACATCATTTTAAAGGCCCCCA...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTGGGGGCCTTTAAAATaGTGTCTTCATCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEWGPLK*CLHQGC
Trigger: ACAGCCTTGATGAAGACATCATTTTAAAGGCCCCCA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCAATACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSILLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTAT...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATGTTTCTGTGTCTTCTaGCGGGCTTCTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRICFCVF*RASGRL
Trigger: AAGCCTCCCAGAAGCCCGTCAGAAGACACAGAAACA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
CDS-3UTR TCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCTCAAGTTCCTTGGTCTaGTTTGGAGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSSSSLV*FGASLK
Trigger: TTTTAAACTGGCTCCAAATCAGACCAAGGAACTTGA...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTCAAGTTCCTTGGTCTaGTTTGGAGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSSSSLV*FGASLK
Trigger: TTTTAAACTGGCTCCAAATCAGACCAAGGAACTTGA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAAATTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAATT...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCAAGTCCTTTGCTTTGTaGAGATCAACTCCATACATG +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSKSFAL*RSTPYM
Trigger: CATGTATGGAGTTGATCTTCACAAAGCAAAGGACTT...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGATAACTGGGGAGCTTaGAGCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQDNWGA*SRWYFH
Trigger: ATGAAAGTACCATCGGCTTCAAGCTCCCCAGTTATC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCATTTTTGATCTCTTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAAGAGATCAAAAA...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGATTTTTGATCTCTTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAAGAGATCAAAAA...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGAGCATTGGCAGTATCTaGGATGGTGACAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAESIGSI*DGDSLS
Trigger: ACTCAAACTGTCACCATCTCAGATACTGCCAATGCT...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTATCGGCATCTCCTGTaGTCACAATTCTCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEYRHLL*SQFSSR
Trigger: TCGAGAAGAGAATTGTGATCACAGGAGATGCCGATA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTGCTTGTACAAGGACCTaGTCATGGTCGATATCGGCA +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPACTRT*SWSISA
Trigger: TGCCGATATCGACCATGATCAGGTCCTTGTACAAGC...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAGCTCCTTGGCTTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIAPWLP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGC...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAGCTCCTTGGCTTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISAPWLP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGC...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTGTGGTCATCAGGCTCTaGCTAGGAACTACTGACTGT +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPVVIRL*LGTTDC
Trigger: ACAGTCAGTAGTTCCTAGTCAGAGCCTGATGACCAC...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS-3UTR TCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGGAGATGGTGACAGTTTaGGTCTGGAAACTTCGAATG +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWEMVTV*VWKLRM
Trigger: CATTCGAAGTTTCCAGACTCAAACTGTCACCATCTC...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGAGCTGTGTCTCTATACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGAVSLY*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTATAGAGACACAGC...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCAGCTGTGTCTCTATACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSAVSLY*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTATAGAGACACAGC...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTCCCTCCAAGTCCTTTaGTTTGTGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAESLQVL*FVKINS
Trigger: GGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR GCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGTCCCTCCAAGTCCTTTaGTTTGTGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWSLQVL*FVKINS
Trigger: GGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGA...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR GCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTCTCCAGTAGGGACTTaGCCGTTGATGTTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQSPVGT*PLMLRV
Trigger: GACTCTTAACATCAACGGGCAAGTCCCTACTGGAGA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR GCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTACTGACATGTCTGGATaGTGCTCCTTGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPTDMSG*CSLASL
Trigger: CAAGGAAGCCAAGGAGCAGCATCCAGACATGTCAGT...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTTCTCTTTTTCTTCCATaGTTCTGTGGGCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPSLFLP*FCGLRL
Trigger: GAGCCGGAGCCCACAGAAGCATGGAAGAAAAAGAGA...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000105970.8
ENSMUST00000137846.8
CDS-3UTR GCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATCTCTTCCGCCTCCTTaGTGTTTATGGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRISLPPP*CLWRGS
Trigger: GCTCCCTCTCCATAAACAGCAAGGAGGCGGAAGAGA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS-3UTR GCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAATCAAGATAGCCAGCTaGCCCCTGCTCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIIKIAS*PLLLLF
Trigger: GAAGAGAAGGAGCAGGGGGCAGCTGGCTATCTTGAT...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS-3UTR GCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATACTGGGAAACTGAATaGACTGGCCTGTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTYWETE*TGLFLH
Trigger: GTGGAGGAACAGGCCAGTGCATTCAGTTTCCCAGTA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTTGGAGTGTCCCCATTaGATGCTTTCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATLECPH*MLSASA
Trigger: AGCAGAAGCTGAAAGCATCCAATGGGGACACTCCAA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGATGAAGATCCAAAGATaGGTCTGTTTTGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAMKIQR*VCFELR
Trigger: CCTGAGCTCAAAACAGACCCATCTTTGGATCTTCAT...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGTGTTCTTCCTGAGCTaGCTGTGTCTCTATACTGCT +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQVFFLS*LCLYTA
Trigger: AGCAGTATAGAGACACAGCCAGCTCAGGAAGAACAC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCATTCCTTGGTCTGATTTaGAGCCAGTTTAAAATCACT +
Preference number: 4 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSFLGLI*SQFKIT
Trigger: AGTGATTTTAAACTGGCTCCAAATCAGACCAAGGAA...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGCCTGAGCTGGAGTCATaGACCTGTATGATTTATGCA +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEPELES*TCMIYA
Trigger: TGCATAAATCATACAGGTCCATGACTCCAGCTCAGG...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATGTCAATCAGGGCACTaGCTTGCCTGGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRICQSGH*LAWSEL
Trigger: AAGCTCAGACCAGGCAAGCCAGTGCCCTGATTGACA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATGTCCGCTCAAAGTGTaGAGCAGGCCTGTCAATCAG +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISCPLKV*SRPVNQ
Trigger: CTGATTGACAGGCCTGCTCCACACTTTGAGCGGACA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp ACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAGAGGACTTCGGTCTGTaGACTCAGCAGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TWTFSSLHPCILLSKVKAEDFGL*TQQLLL
Trigger: GAGCAGCAGCTGCTGAGTCCACAGACCGAAGTCCTC...TGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATTTGATAGGTGCCCCTaGCCCTTCTGTGACCTGACT +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIFDRCP*PFCDLT
Trigger: AGTCAGGTCACAGAAGGGCCAGGGGCACCTATCAAA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGGCTTGTCCCACTCGCTaGGCCGTGGTTCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERACPTR*AVVRVP
Trigger: CGGTACCCGAACCACGGCCCAGCGAGTGGGACAAGC...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CCA 90 bp CAGAATAGAAGGATTTGTCTCAGATTCTGGTGTCAAGGTCACAAAGAGCAGGGAGCTTGTCCCACTCGCTaGGCCGTGGTTCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: QNRRICLRFWCQGHKEQGACPTR*AVVRVP
Trigger: CGGTACCCGAACCACGGCCCAGCGAGTGGGACAAGC...TCCCTGCTCTTTGTGACCTTGACACCAGAATCTGAGACAAATCCTTCTATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGAGGGACATCTTTGGTTaGGATTTCACTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRARDIFG*DFTFHS
Trigger: GCTGTGAAAAGTGAAATCCCAACCAAAGATGTCCCT...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAATCTCTGTCTCCTGGTaGACGACCACCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIISVSW*TTTLVT
Trigger: AGTGACCAAGGTGGTCGTCCACCAGGAGACAGAGAT...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAATCTCTGTCTCCTGGTaGACGACCACCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISISVSW*TTTLVT
Trigger: AGTGACCAAGGTGGTCGTCCACCAGGAGACAGAGAT...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAATGAGGGTGGGGAACTaGTTACCCACAGGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIMRVGN*LPTGES
Trigger: TGACTCACCTGTGGGTAACCAGTTCCCCACCCTCAT...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp CCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCGTAGCTAGGGCACTCTaGCCCACCAACCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PQLVNLDLFFPASLYPAIVARAL*PTNLSS
Trigger: GGAAGAAAGGTTGGTGGGCCAGAGTGCCCTAGCTAC...GATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp TTATATACAAGGCAAGCTGGTTCCTGGGATCCACAGGTGGCAGGCGGCAAACAAGAGGACTTCGGTCTGTaGACTCAGCAGCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LYTRQAGSWDPQVAGGKQEDFGL*TQQLLH
Trigger: ATGGAGCAGCTGCTGAGTCCACAGACCGAAGTCCTC...TTGTTTGCCGCCTGCCACCTGTGGATCCCAGGAACCAGCTTGCCTTGTATATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR TCA 90 bp ACAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATGAGGCCTCCTCCAGCTaGGTTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TRKANTAPQDLSDYTAWNEASSS*VSCWPE
Trigger: CTCAGGCCAACAAGAAACTCAGCTGGAGGAGGCCTC...ATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCATACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSILLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTAT...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGAATACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGILLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTAT...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp CCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCAATTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: PQLVNLDLFFPASLYPAINSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAATT...GATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR TCA 90 bp TTATATACAAGGCAAGCTGGTTCCTGGGATCCACAGGTGGCAGGCGGCAAACAAAATTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: LYTRQAGSWDPQVAGGKQNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAATT...TTGTTTGCCGCCTGCCACCTGTGGATCCCAGGAACCAGCTTGCCTTGTATATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR TCA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGAAGTCCTTTGCTTTGTaGAGATCAACTCCATACATG +
Preference number: 4 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAKSFAL*RSTPYM
Trigger: CATGTATGGAGTTGATCTTCACAAAGCAAAGGACTT...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAGATAACTGGGGAGCTTaGAGCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTDNWGA*SRWYFH
Trigger: ATGAAAGTACCATCGGCTTCAAGCTCCCCAGTTATC...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTTTTTGATCTCTTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAAGAGATCAAAAA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGCAGTATCTGAGATGGTaGCAGTTTGAGTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKQYLRW*QFESLP
Trigger: TGGTAAAGACTCAAACTGTCACCATCTCAGATACTG...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGCAGTATCTGAGATGGTaGCAGTTTGAGTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWQYLRW*QFESLP
Trigger: TGGTAAAGACTCAAACTGTCACCATCTCAGATACTG...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGAGCATTGGCAGTATCTaGGATGGTGACAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQSIGSI*DGDSLS
Trigger: ACTCAAACTGTCACCATCTCAGATACTGCCAATGCT...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTATCGGCATCTCCTGTaGTCACAATTCTCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATYRHLL*SQFSSR
Trigger: TCGAGAAGAGAATTGTGATCACAGGAGATGCCGATA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTATCGGCATCTCCTGTaGTCACAATTCTCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQYRHLL*SQFSSR
Trigger: TCGAGAAGAGAATTGTGATCACAGGAGATGCCGATA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAGCTTGTACAAGGACCTaGTCATGGTCGATATCGGCA +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISACTRT*SWSISA
Trigger: TGCCGATATCGACCATGATCAGGTCCTTGTACAAGC...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAGAGTTACTGGGAAACTaGATGCACTGGCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIELLGN*MHWPVP
Trigger: AGGAACAGGCCAGTGCATTCAGTTTCCCAGTAACTC...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATCTTCTTCAGAGACCTaGGACTTGGGCCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRISSSET*DLGLLR
Trigger: CCTCAAAAGGCCCAAGTCGCAGGTCTCTGAAGAAGA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGCTGATTCTACTTCTCTaGCTTCTTCTTCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAELILLL*LLLQRP
Trigger: AGGTCTCTGAAGAAGAAGGCAGAGAAGTAGAATCAG...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGCTGATTCTACTTCTCTaGCTTCTTCTTCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWLILLL*LLLQRP
Trigger: AGGTCTCTGAAGAAGAAGGCAGAGAAGTAGAATCAG...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGAAGGAGACCTTACAGTaGATGTTTCTGTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWKETLQ*MFLCLL
Trigger: CAGAAGACACAGAAACATGCACTGTAAGGTCTCCTT...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
CDS-3UTR GCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATACCAGGGCAAGAAACTTaGTTTTGGGGATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIPGQET*FWGWCL
Trigger: CAGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGG...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR GCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATCTCCAGTAGGGACTTaGCCGTTGATGTTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTSPVGT*PLMLRV
Trigger: GACTCTTAACATCAACGGGCAAGTCCCTACTGGAGA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR GCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGATCTTCACCTTTTCCTaGAAGCTTCTTCCATGCTTC +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKIFTFS*KLLPCF
Trigger: GAAGCATGGAAGAAGCTTGCAGGAAAAGGTGAAGAT...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146443.8
CDS-3UTR CCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTTTGGAGTGTCCCCATTaGATGCTTTCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPLECPH*MLSASA
Trigger: AGCAGAAGCTGAAAGCATCCAATGGGGACACTCCAA...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACACAAGTCTTCATGTGTTaGAGTGTCCCCATTGGATGC +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTQVFMC*SVPIGC
Trigger: GCATCCAATGGGGACACTCCAACACATGAAGACTTG...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCTTCCTTGGTCTGATTTaGAGCCAGTTTAAAATCACT +
Preference number: 4 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSFLGLI*SQFKIT
Trigger: AGTGATTTTAAACTGGCTCCAAATCAGACCAAGGAA...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGATTCCTTGGTCTGATTTaGAGCCAGTTTAAAATCACT +
Preference number: 4 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGFLGLI*SQFKIT
Trigger: AGTGATTTTAAACTGGCTCCAAATCAGACCAAGGAA...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTTCCTTGGTCTGATTTaGAGCCAGTTTAAAATCACT +
Preference number: 4 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSFLGLI*SQFKIT
Trigger: AGTGATTTTAAACTGGCTCCAAATCAGACCAAGGAA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGCCTGAGCTGGAGTCATaGACCTGTATGATTTATGCA +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQPELES*TCMIYA
Trigger: TGCATAAATCATACAGGTCCATGACTCCAGCTCAGG...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGACTCTGAGCAATGGCTaGGGCAGAGGTGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERTLSNG*GRGGPR
Trigger: CCTCGGCCCACCTCTGCCCCAGCCATTGCTCAGAGT...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAGATGGCATTTGATAGGTGCCCCTaGCCCTTCTGTGACCTGACT +
Preference number: 4 (lower is better)
Translates to: PFLPCIPVSCYPRSRQMAFDRCP*PFCDLT
Trigger: AGTCAGGTCACAGAAGGGCCAGGGGCACCTATCAAA...TGCCATCTGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp GGCTGTCTGCACTCAGGGATTAGGCATATAGTGATCAAATGTGTCTCAGTACAACCTTCCATGCTTCTGTaGGCTCCGGCTCAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: GCLHSGIRHIVIKCVSVQPSMLL*APAQRA
Trigger: AGCCCGCTGAGCCGGAGCCCACAGAAGCATGGAAGG...TTGTACTGAGACACATTTGATCACTATATGCCTAATCCCTGAGTGCAGACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAGCAAGCTTCTGCGTTTaGTCACCATTTGAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTASFCV*SPFEVG
Trigger: ACCTACCTCAAATGGTGACCAAACGCAGAAGCTTGC...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030739.11
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTGCAAGCTTCTGCGTTTaGTCACCATTTGAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPASFCV*SPFEVG
Trigger: ACCTACCTCAAATGGTGACCAAACGCAGAAGCTTGC...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030739.11
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTCACTGATGCTGGCATaGTGCTTTTTGATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAESLMLA*CFLISS
Trigger: AGAAGAGATCAAAAAGCACCATGCCAGCATCAGTGA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp CCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAGGCCTCTGCTTTCTaGTGTCCGTTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PQLVNLDLFFPASLYPAIQASAF*CPFLVL
Trigger: AAGAACAAGGAACGGACATCAGAAAGCAGAGGCCTG...GATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR TCA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCTGTTTCTGTGTCTTCTaGCGGGCTTCTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: QERQTQPHKTSVITQPGICFCVF*RASGRL
Trigger: AAGCCTCCCAGAAGCCCGTCAGAAGACACAGAAACA...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTCAAGTTCCTTGGTCTaGTTTGGAGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAESSSLV*FGASLK
Trigger: TTTTAAACTGGCTCCAAATCAGACCAAGGAACTTGA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTCAGTATCTGAGATGGTaGCAGTTTGAGTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATQYLRW*QFESLP
Trigger: TGGTAAAGACTCAAACTGTCACCATCTCAGATACTG...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTAGCATTGGCAGTATCTaGGATGGTGACAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPSIGSI*DGDSLS
Trigger: ACTCAAACTGTCACCATCTCAGATACTGCCAATGCT...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATATCGGCATCTCCTGTaGTCACAATTCTCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTYRHLL*SQFSSR
Trigger: TCGAGAAGAGAATTGTGATCACAGGAGATGCCGATA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCCTGAGTTCCTTTAGCTaGGCTAGCCTTCTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: QERQTQPHKTSVITQPGILSSFS*ASLLWS
Trigger: CGACCAGAGAAGGCTAGCTCAGCTAAAGGAACTCAG...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR GCA 90 bp CCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAGATGGCATCTTCTTCAGAGACCTaGGACTTGGGCCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: PFLPCIPVSCYPRSRQMASSSET*DLGLLR
Trigger: CCTCAAAAGGCCCAAGTCGCAGGTCTCTGAAGAAGA...TGCCATCTGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR GCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGAAGGAGACCTTACAGTaGATGTTTCTGTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQKETLQ*MFLCLL
Trigger: CAGAAGACACAGAAACATGCACTGTAAGGTCTCCTT...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
CDS-3UTR GCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTTCCCTCCAAGTCCTTTaGTTTGTGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPSLQVL*FVKINS
Trigger: GGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGA...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR GCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATCCCTCCAAGTCCTTTaGTTTGTGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTSLQVL*FVKINS
Trigger: GGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR GCA 90 bp CCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCCAGGGCAAGAAACTTaGTTTTGGGGATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PQLVNLDLFFPASLYPAIPGQET*FWGWCL
Trigger: CAGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGG...GATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR GCA 90 bp TTATATACAAGGCAAGCTGGTTCCTGGGATCCACAGGTGGCAGGCGGCAAACAACCAGGGCAAGAAACTTaGTTTTGGGGATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LYTRQAGSWDPQVAGGKQPGQET*FWGWCL
Trigger: CAGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGG...TTGTTTGCCGCCTGCCACCTGTGGATCCCAGGAACCAGCTTGCCTTGTATATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR GCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATCTCCAGTAGGGACTTaGCCGTTGATGTTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRISPVGT*PLMLRV
Trigger: GACTCTTAACATCAACGGGCAAGTCCCTACTGGAGA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR GCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATCTCCAGTAGGGACTTaGCCGTTGATGTTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISSPVGT*PLMLRV
Trigger: GACTCTTAACATCAACGGGCAAGTCCCTACTGGAGA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR GCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCCTCCTCTGTTCGAATaGCATTTACACTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPPPLFE*HLHFHL
Trigger: GAGATGGAAGTGTAAATGGCATTCGAACAGAGGAGG...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTCCGTTCCTTGTTCTTaGTCAAGTCTTCATGTGTTG +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQSVPCS*SSLHVL
Trigger: CAACACATGAAGACTTGACCAAGAACAAGGAACGGA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAGTGTTCTTCCTGAGCTaGCTGTGTCTCTATACTGCT +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIVFFLS*LCLYTA
Trigger: AGCAGTATAGAGACACAGCCAGCTCAGGAAGAACAC...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAGTGTTCTTCCTGAGCTaGCTGTGTCTCTATACTGCT +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISVFFLS*LCLYTA
Trigger: AGCAGTATAGAGACACAGCCAGCTCAGGAAGAACAC...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCCTGAGCTGGAGTCATaGACCTGTATGATTTATGCA +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPPELES*TCMIYA
Trigger: TGCATAAATCATACAGGTCCATGACTCCAGCTCAGG...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGGCACTGGCTTGCCTaGTCTGAGCTTGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKGHWLA*SELESG
Trigger: GCCGGACTCAAGCTCAGACCAGGCAAGCCAGTGCCC...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp GCTGGAACAGCTGATGTTTGTCCTCTGATAACTATGACTATATCTTTTGAGCCCGGGCACTGGCTTGCCTaGTCTGAGCTTGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: AGTADVCPLITMTISFEPGHWLA*SELESG
Trigger: GCCGGACTCAAGCTCAGACCAGGCAAGCCAGTGCCC...GGGCTCAAAAGATATAGTCATAGTTATCAGAGGACAAACATCAGCTGTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CCA 90 bp ACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCATGTCAATCAGGGCACTaGCTTGCCTGGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: TWTFSSLHPCILLSKVKACQSGH*LAWSEL
Trigger: AAGCTCAGACCAGGCAAGCCAGTGCCCTGATTGACA...TGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp CTAAGACCTTTCAGACCCAAGCATCAGACGTGCTGTCTTTCTGCATCCTTGCAGTGTCAATCAGGGCACTaGCTTGCCTGGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LRPFRPKHQTCCLSASLQCQSGH*LAWSEL
Trigger: AAGCTCAGACCAGGCAAGCCAGTGCCCTGATTGACA...CTGCAAGGATGCAGAAAGACAGCACGTCTGATGCTTGGGTCTGAAAGGTCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CCA 90 bp ACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCATGTCCGCTCAAAGTGTaGAGCAGGCCTGTCAATCAG +
Preference number: 4 (lower is better)
Translates to: TWTFSSLHPCILLSKVKACPLKV*SRPVNQ
Trigger: CTGATTGACAGGCCTGCTCCACACTTTGAGCGGACA...TGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAACTCCATCGAGGCTCCTaGACGCCCGCTTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKLHRGS*TPACLL
Trigger: CAGCAAGCAAGCGGGCGTCCAGGAGCCTCGATGGAG...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAACTCTGAGCAATGGCTaGGGCAGAGGTGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKTLSNG*GRGGPR
Trigger: CCTCGGCCCACCTCTGCCCCAGCCATTGCTCAGAGT...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTCACTGATGCTGGCATaGTGCTTTTTGATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQSLMLA*CFLISS
Trigger: AGAAGAGATCAAAAAGCACCATGCCAGCATCAGTGA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGAGGGACATCTTTGGTTaGGATTTCACTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQRDIFG*DFTFHS
Trigger: GCTGTGAAAAGTGAAATCCCAACCAAAGATGTCCCT...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATGGGGGCCTTTAAAATaGTGTCTTCATCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISWGPLK*CLHQGC
Trigger: ACAGCCTTGATGAAGACATCATTTTAAAGGCCCCCA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGATACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKILLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTAT...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEILLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTAT...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTCAAGTTCCTTGGTCTaGTTTGGAGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATSSSLV*FGASLK
Trigger: TTTTAAACTGGCTCCAAATCAGACCAAGGAACTTGA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGAAGTCCTTTGCTTTGTaGAGATCAACTCCATACATG +
Preference number: 4 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQKSFAL*RSTPYM
Trigger: CATGTATGGAGTTGATCTTCACAAAGCAAAGGACTT...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAACCCCTGGCCCTTCTGTaGCCTGACTCTGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKPLALL*PDSEQW
Trigger: CCATTGCTCAGAGTCAGGTCACAGAAGGGCCAGGGG...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCAGTATCTGAGATGGTaGCAGTTTGAGTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPQYLRW*QFESLP
Trigger: TGGTAAAGACTCAAACTGTCACCATCTCAGATACTG...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACACAGTATCTGAGATGGTaGCAGTTTGAGTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTQYLRW*QFESLP
Trigger: TGGTAAAGACTCAAACTGTCACCATCTCAGATACTG...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAAGCATTGGCAGTATCTaGGATGGTGACAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRISIGSI*DGDSLS
Trigger: ACTCAAACTGTCACCATCTCAGATACTGCCAATGCT...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATATCGGCATCTCCTGTaGTCACAATTCTCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISYRHLL*SQFSSR
Trigger: TCGAGAAGAGAATTGTGATCACAGGAGATGCCGATA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATCTCTGTGTTCTTCCTaGGCTGGTTTAATAATCCAG +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTSLCSS*AGLIIQ
Trigger: CTGGATTATTAAACCAGCTCAGGAAGAACACAGAGA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000105970.8
ENSMUST00000105975.8
CDS-3UTR GCA 90 bp ACAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATTTTTTCCACCTTCCATaGTTCTGTGGGCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: TRKANTAPQDLSDYTAWNFFHLP*FCGLRL
Trigger: GAGCCGGAGCCCACAGAAGCATGGAAGGTGGAAAAA...ATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR GCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAATCTTCACCTTTTCCTaGAAGCTTCTGCGTTTGGTC +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIIFTFS*KLLRLV
Trigger: GACCAAACGCAGAAGCTTGCAGGAAAAGGTGAAGAT...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030739.11
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGTTCCTTGGTCTGATTTaGAGCCAGTTTAAAATCACT +
Preference number: 4 (lower is better)
Translates to: GGPTELALSSNSWQGLWKFLGLI*SQFKIT
Trigger: AGTGATTTTAAACTGGCTCCAAATCAGACCAAGGAA...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCTCCATCGAGGCTCCTaGACGCCCGCTTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYLHRGS*TPACLL
Trigger: CAGCAAGCAAGCGGGCGTCCAGGAGCCTCGATGGAG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTCTCCATCGAGGCTCCTaGACGCCCGCTTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCLHRGS*TPACLL
Trigger: CAGCAAGCAAGCGGGCGTCCAGGAGCCTCGATGGAG...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGGAGGACTTCGGTCTGTaGACTCAGCAGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYEREDFGL*TQQLLL
Trigger: GAGCAGCAGCTGCTGAGTCCACAGACCGAAGTCCTC...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
3UTR CAA 72 bp AGACCCAAGCATCAGACGTGCTGTCTTTCTGCATCCTaGCAGAGAGCAGGAAGTAACCATGTTTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: RPKHQTCCLSAS*QRAGSNHVFPF
Trigger: GAACGGGAAAACATGGTTACTTCCTGCTCTCTGCAAGGATGCAGAAAGACAGCACGTCTGATGCTTGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR TCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTAAGTCCTTTGCTTTGTaGAGATCAACTCCATACATG +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPKSFAL*RSTPYM
Trigger: CATGTATGGAGTTGATCTTCACAAAGCAAAGGACTT...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp ACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAGATAACTGGGGAGCTTaGAGCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: TWTFSSLHPCILLSKVKADNWGA*SRWYFH
Trigger: ATGAAAGTACCATCGGCTTCAAGCTCCCCAGTTATC...TGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR TCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTTTTTGATCTCTTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAAGAGATCAAAAA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATCTCTGTGTTCTTCCTaGGCTGGTTTAATAATCCAG +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISSLCSS*AGLIIQ
Trigger: CTGGATTATTAAACCAGCTCAGGAAGAACACAGAGA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105970.8
ENSMUST00000105975.8
CDS-3UTR TCA 90 bp CTAAGACCTTTCAGACCCAAGCATCAGACGTGCTGTCTTTCTGCATCCTTGCAGGGAGAAAAGACATCATaGAAGGAATACGAGGCGACG +
Preference number: 4 (lower is better)
Translates to: LRPFRPKHQTCCLSASLQGEKTS*KEYEAT
Trigger: CGTCGCCTCGTATTCCTTTCATGATGTCTTTTCTCC...CTGCAAGGATGCAGAAAGACAGCACGTCTGATGCTTGGGTCTGAAAGGTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR GCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCACTGATTCTACTTCTCTaGCTTCTTCTTCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISLILLL*LLLQRP
Trigger: AGGTCTCTGAAGAAGAAGGCAGAGAAGTAGAATCAG...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp ACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCATCTCCAGTAGGGACTTaGCCGTTGATGTTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: TWTFSSLHPCILLSKVKASPVGT*PLMLRV
Trigger: GACTCTTAACATCAACGGGCAAGTCCCTACTGGAGA...TGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCTTGGAGTGTCCCCATTaGATGCTTTCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QERQTQPHKTSVITQPGILECPH*MLSASA
Trigger: AGCAGAAGCTGAAAGCATCCAATGGGGACACTCCAA...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCCAAGTCTTCATGTGTTaGAGTGTCCCCATTGGATGC +
Preference number: 4 (lower is better)
Translates to: QERQTQPHKTSVITQPGIQVFMC*SVPIGC
Trigger: GCATCCAATGGGGACACTCCAACACATGAAGACTTG...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCGTGTTCTTCCTGAGCTaGCTGTGTCTCTATACTGCT +
Preference number: 4 (lower is better)
Translates to: QERQTQPHKTSVITQPGIVFFLS*LCLYTA
Trigger: AGCAGTATAGAGACACAGCCAGCTCAGGAAGAACAC...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTTCCTTGGTCTGATTTaGAGCCAGTTTAAAATCACT +
Preference number: 4 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATFLGLI*SQFKIT
Trigger: AGTGATTTTAAACTGGCTCCAAATCAGACCAAGGAA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGAGGACTTCGGTCTGTaGACTCAGCAGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKEDFGL*TQQLLL
Trigger: GAGCAGCAGCTGCTGAGTCCACAGACCGAAGTCCTC...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp GTGCTGGGGATCAAATCAGGGCCTCATGAATATCAAACACACTCAGTAGCTGAATTTGATAGGTGCCCCTaGCCCTTCTGTGACCTGACT +
Preference number: 4 (lower is better)
Translates to: VLGIKSGPHEYQTHSVAEFDRCP*PFCDLT
Trigger: AGTCAGGTCACAGAAGGGCCAGGGGCACCTATCAAA...TTCAGCTACTGAGTGTGTTTGATATTCATGAGGCCCTGATTTGATCCCCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAAGGGACATCTTTGGTTaGGATTTCACTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISRDIFG*DFTFHS
Trigger: GCTGTGAAAAGTGAAATCCCAACCAAAGATGTCCCT...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp CTAAGACCTTTCAGACCCAAGCATCAGACGTGCTGTCTTTCTGCATCCTTGCAGGCAAGGTTCTCTCAGTaGATCTCTCTGGCCTTTTAC +
Preference number: 4 (lower is better)
Translates to: LRPFRPKHQTCCLSASLQARFSQ*ISLAFY
Trigger: GTAAAAGGCCAGAGAGATCCACTGAGAGAACCTTGC...CTGCAAGGATGCAGAAAGACAGCACGTCTGATGCTTGGGTCTGAAAGGTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR TCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTGAGGCCTCCTCCAGCTaGGTTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCEASSS*VSCWPE
Trigger: CTCAGGCCAACAAGAAACTCAGCTGGAGGAGGCCTC...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAATACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTILLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTAT...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGAATTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAATT...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAAAGTCCTTTGCTTTGTaGAGATCAACTCCATACATG +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIKSFAL*RSTPYM
Trigger: CATGTATGGAGTTGATCTTCACAAAGCAAAGGACTT...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAAAGTCCTTTGCTTTGTaGAGATCAACTCCATACATG +
Preference number: 4 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISKSFAL*RSTPYM
Trigger: CATGTATGGAGTTGATCTTCACAAAGCAAAGGACTT...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp ATCAGCTCTGTTCAATATCAGGACTTGGTATCCATTTATCAGCAGCTTTACCAACCCCTGGCCCTTCTGTaGCCTGACTCTGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: ISSVQYQDLVSIYQQLYQPLALL*PDSEQW
Trigger: CCATTGCTCAGAGTCAGGTCACAGAAGGGCCAGGGG...TTGGTAAAGCTGCTGATAAATGGATACCAAGTCCTGATATTGAACAGAGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR TCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGACCACCTTGGTCACTaGCATGTCTGGATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKDHLGH*HVWMLL
Trigger: GAGCAGCATCCAGACATGTCAGTGACCAAGGTGGTC...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp CCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCTTGCACACCCCTAAGTaGTATGTATCAGGGATAAAG +
Preference number: 4 (lower is better)
Translates to: PQLVNLDLFFPASLYPAILHTPK*YVSGIK
Trigger: CTTTATCCCTGATACATATCACTTAGGGGTGTGCAA...GATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR GCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGGTCGTGACAGGCCTCTaGTTTCTGATGTCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERVVTGL*FLMSVP
Trigger: AGGAACGGACATCAGAAAGCAGAGGCCTGTCACGAC...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTGCTGTGTCTCTATACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPAVSLY*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTATAGAGACACAGC...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp CCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAGATGGCAAAGGAGACCTTACAGTaGATGTTTCTGTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PFLPCIPVSCYPRSRQMAKETLQ*MFLCLL
Trigger: CAGAAGACACAGAAACATGCACTGTAAGGTCTCCTT...TGCCATCTGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR GCA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCTCCCTCCAAGTCCTTTaGTTTGTGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: QERQTQPHKTSVITQPGISLQVL*FVKINS
Trigger: GGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGA...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR GCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTTTTTCCACCTTCCATaGTTCTGTGGGCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERFFHLP*FCGLRL
Trigger: GAGCCGGAGCCCACAGAAGCATGGAAGGTGGAAAAA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030739.11
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp CCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAGATGGCAATGAAGATCCAAAGATaGGTCTGTTTTGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PFLPCIPVSCYPRSRQMAMKIQR*VCFELR
Trigger: CCTGAGCTCAAAACAGACCCATCTTTGGATCTTCAT...TGCCATCTGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTTTCCTTGGTCTGATTTaGAGCCAGTTTAAAATCACT +
Preference number: 4 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPFLGLI*SQFKIT
Trigger: AGTGATTTTAAACTGGCTCCAAATCAGACCAAGGAA...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCCCTGAGCTGGAGTCATaGACCTGTATGATTTATGCA +
Preference number: 4 (lower is better)
Translates to: QERQTQPHKTSVITQPGIPELES*TCMIYA
Trigger: TGCATAAATCATACAGGTCCATGACTCCAGCTCAGG...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTGTCAATCAGGGCACTaGCTTGCCTGGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERCQSGH*LAWSEL
Trigger: AAGCTCAGACCAGGCAAGCCAGTGCCCTGATTGACA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTCGGATGTGATGGTCTaGGCTGTCAGCAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERSDVMV*AVSKTP
Trigger: TGGAGTCTTGCTGACAGCCCAGACCATCACATCCGA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp CCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCTCTTTTTCTGCGTTTaGTCACCATTTGAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: PQLVNLDLFFPASLYPAILFFCV*SPFEVG
Trigger: ACCTACCTCAAATGGTGACCAAACGCAGAAAAAGAG...GATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTCAGAGGCAGGGTAGGTaGATGGCCCTTTTGTCACGG +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCQRQGR*MALLSR
Trigger: CCGTGACAAAAGGGCCATCCACCTACCCTGCCTCTG...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS-3UTR TCA 90 bp ACAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATTGGGGGCCTTTAAAATaGTGTCTTCATCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TRKANTAPQDLSDYTAWNWGPLK*CLHQGC
Trigger: ACAGCCTTGATGAAGACATCATTTTAAAGGCCCCCA...ATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR TCA 90 bp CCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCAAGTCCTTTGCTTTGTaGAGATCAACTCCATACATG +
Preference number: 4 (lower is better)
Translates to: PQLVNLDLFFPASLYPAIKSFAL*RSTPYM
Trigger: CATGTATGGAGTTGATCTTCACAAAGCAAAGGACTT...GATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR TCA 90 bp GTGCTGGGGATCAAATCAGGGCCTCATGAATATCAAACACACTCAGTAGCTGAAGATAACTGGGGAGCTTaGAGCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: VLGIKSGPHEYQTHSVAEDNWGA*SRWYFH
Trigger: ATGAAAGTACCATCGGCTTCAAGCTCCCCAGTTATC...TTCAGCTACTGAGTGTGTTTGATATTCATGAGGCCCTGATTTGATCCCCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR TCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATTTTTGATCTCTTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAAGAGATCAAAAA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp CCAGCTCCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTTTTTTGATCTCTTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: PAPQLVNLDLFFPASLYPFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAAGAGATCAAAAA...AGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGGAGCTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGACCACCTTGGTCACTaGCATGTCTGGATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYDHLGH*HVWMLL
Trigger: GAGCAGCATCCAGACATGTCAGTGACCAAGGTGGTC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTGACCACCTTGGTCACTaGCATGTCTGGATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCDHLGH*HVWMLL
Trigger: GAGCAGCATCCAGACATGTCAGTGACCAAGGTGGTC...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp ACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCACTGATTCTACTTCTCTaGCTTCTTCTTCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: TWTFSSLHPCILLSKVKALILLL*LLLQRP
Trigger: AGGTCTCTGAAGAAGAAGGCAGAGAAGTAGAATCAG...TGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR GCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGACTGACATGTCTGGATaGTGCTCCTTGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERTDMSG*CSLASL
Trigger: CAAGGAAGCCAAGGAGCAGCATCCAGACATGTCAGT...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp ACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCATCCGTTCCTTGTTCTTaGTCAAGTCTTCATGTGTTG +
Preference number: 4 (lower is better)
Translates to: TWTFSSLHPCILLSKVKASVPCS*SSLHVL
Trigger: CAACACATGAAGACTTGACCAAGAACAAGGAACGGA...TGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTCATGCCGTGCAGTTCTaGGTCATAGTCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCHAVQF*VIVSQL
Trigger: GAGCTGGGAGACTATGACCCAGAACTGCACGGCATG...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCATGCCGTGCAGTTCTaGGTCATAGTCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYHAVQF*VIVSQL
Trigger: GAGCTGGGAGACTATGACCCAGAACTGCACGGCATG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATTCCTTGGTCTGATTTaGAGCCAGTTTAAAATCACT +
Preference number: 4 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIFLGLI*SQFKIT
Trigger: AGTGATTTTAAACTGGCTCCAAATCAGACCAAGGAA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATGTCAATCAGGGCACTaGCTTGCCTGGTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKCQSGH*LAWSEL
Trigger: AAGCTCAGACCAGGCAAGCCAGTGCCCTGATTGACA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCACTCCATCGAGGCTCCTaGACGCCCGCTTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSLHRGS*TPACLL
Trigger: CAGCAAGCAAGCGGGCGTCCAGGAGCCTCGATGGAG...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATTTGATAGGTGCCCCTaGCCCTTCTGTGACCTGACT +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKFDRCP*PFCDLT
Trigger: AGTCAGGTCACAGAAGGGCCAGGGGCACCTATCAAA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATCGGATGTGATGGTCTaGGCTGTCAGCAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKSDVMV*AVSKTP
Trigger: TGGAGTCTTGCTGACAGCCCAGACCATCACATCCGA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTCCACCGAGTTGCAGCTaGCAGGAAGCTGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCPPSCS*QEAGVT
Trigger: AGTAACTCCAGCTTCCTGCCAGCTGCAACTCGGTGG...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp GGCTGTCTGCACTCAGGGATTAGGCATATAGTGATCAAATGTGTCTCAGTACAAGTGTTCCTCGGGGATTaGAATAGAAACCTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GCLHSGIRHIVIKCVSVQVFLGD*NRNLGS
Trigger: GCTCCCAAGGTTTCTATTCCAATCCCCGAGGAACAC...TTGTACTGAGACACATTTGATCACTATATGCCTAATCCCTGAGTGCAGACAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CAA 72 bp ACGGATGGTGGTGAGCCATCATGTAGTTACTGGGATTaGAACTCAGGACTTTTGGAAGAACAGTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: TDGGEPSCSYWD*NSGLLEEQSVL
Trigger: GAGCACAGACTGTTCTTCCAAAAGTCCTGAGTTCAAATCCCAGTAACTACATGATGGCTCACCACCATCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACAGTTTCTTGTTGGCCTaGGTTTGTGGCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYSFLLA*VCGSLS
Trigger: GGAGAGGGAGCCACAAACTCAGGCCAACAAGAAACT...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTGTTTCTGTGTCTTCTaGCGGGCTTCTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYCFCVF*RASGRL
Trigger: AAGCCTCCCAGAAGCCCGTCAGAAGACACAGAAACA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
CDS-3UTR TCA 90 bp ACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCATCAAGTTCCTTGGTCTaGTTTGGAGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: TWTFSSLHPCILLSKVKASSSLV*FGASLK
Trigger: TTTTAAACTGGCTCCAAATCAGACCAAGGAACTTGA...TGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR TCA 90 bp CTAAGACCTTTCAGACCCAAGCATCAGACGTGCTGTCTTTCTGCATCCTTGCAGTCAAGTTCCTTGGTCTaGTTTGGAGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: LRPFRPKHQTCCLSASLQSSSLV*FGASLK
Trigger: TTTTAAACTGGCTCCAAATCAGACCAAGGAACTTGA...CTGCAAGGATGCAGAAAGACAGCACGTCTGATGCTTGGGTCTGAAAGGTCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACAATTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAATT...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTAATTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAATT...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGGATAACTGGGGAGCTTaGAGCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERDNWGA*SRWYFH
Trigger: ATGAAAGTACCATCGGCTTCAAGCTCCCCAGTTATC...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGCTTGTACAAGGACCTaGTCATGGTCGATATCGGCA +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKACTRT*SWSISA
Trigger: TGCCGATATCGACCATGATCAGGTCCTTGTACAAGC...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTGCTCCTTGGCTTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCAPWLP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGC...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCTGGTTACCCACAGGTaGGTCAAGAAAGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYLVTHR*VKKGSA
Trigger: AGCGGATCCTTTCTTGACTCACCTGTGGGTAACCAG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGTCGTGACAGGCCTCTaGTTTCTGATGTCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYVVTGL*FLMSVP
Trigger: AGGAACGGACATCAGAAAGCAGAGGCCTGTCACGAC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATCTTCTTCAGAGACCTaGGACTTGGGCCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKSSSET*DLGLLR
Trigger: CCTCAAAAGGCCCAAGTCGCAGGTCTCTGAAGAAGA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGTTGGCCTGAGTTTGTaGCTCCCTCTCCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYVGLSL*LPLLLP
Trigger: AGGAAGAAGGAGAGGGAGCCACAAACTCAGGCCAAC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTTGGAGTGTCCCCATTaGATGCTTTCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERLECPH*MLSASA
Trigger: AGCAGAAGCTGAAAGCATCCAATGGGGACACTCCAA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGCAAGTCTTCATGTGTTaGAGTGTCCCCATTGGATGC +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERQVFMC*SVPIGC
Trigger: GCATCCAATGGGGACACTCCAACACATGAAGACTTG...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGGTGTTCTTCCTGAGCTaGCTGTGTCTCTATACTGCT +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERVFFLS*LCLYTA
Trigger: AGCAGTATAGAGACACAGCCAGCTCAGGAAGAACAC...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp ATCAGCTCTGTTCAATATCAGGACTTGGTATCCATTTATCAGCAGCTTTACCAACATGCCGTGCAGTTCTaGGTCATAGTCTCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ISSVQYQDLVSIYQQLYQHAVQF*VIVSQL
Trigger: GAGCTGGGAGACTATGACCCAGAACTGCACGGCATG...TTGGTAAAGCTGCTGATAAATGGATACCAAGTCCTGATATTGAACAGAGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CCA 90 bp GTGCTGGGGATCAAATCAGGGCCTCATGAATATCAAACACACTCAGTAGCTGAACCTGAGCTGGAGTCATaGACCTGTATGATTTATGCA +
Preference number: 4 (lower is better)
Translates to: VLGIKSGPHEYQTHSVAEPELES*TCMIYA
Trigger: TGCATAAATCATACAGGTCCATGACTCCAGCTCAGG...TTCAGCTACTGAGTGTGTTTGATATTCATGAGGCCCTGATTTGATCCCCAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTTGTCCGCTCAAAGTGTaGAGCAGGCCTGTCAATCAG +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCCPLKV*SRPVNQ
Trigger: CTGATTGACAGGCCTGCTCCACACTTTGAGCGGACA...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp ACAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATTCACTGATGCTGGCATaGTGCTTTTTGATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TRKANTAPQDLSDYTAWNSLMLA*CFLISS
Trigger: AGAAGAGATCAAAAAGCACCATGCCAGCATCAGTGA...ATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTTCGGATGTGATGGTCTaGGCTGTCAGCAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCSDVMV*AVSKTP
Trigger: TGGAGTCTTGCTGACAGCCCAGACCATCACATCCGA...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp AGCAACAGTGAGACAGAAGTTCATCTTGTTCCTCAGTGCTCAGTAGTATTGAGTTCTTCATTTTCGCGCTaGGGCAAGGTTCTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SNSETEVHLVPQCSVVLSSSFSR*GKVLSV
Trigger: CACTGAGAGAACCTTGCCCCAGCGCGAAAATGAAGA...ACTCAATACTACTGAGCACTGAGGAACAAGATGAACTTCTGTCTCACTGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTTCTGTTGCTGGTGCTaGGAATTCTCAGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYFCCWC*EFSASA
Trigger: GGCTGAAGCTGAGAATTCTCAGCACCAGCAACAGAA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCAGGCCTCTGCTTTCTaGTGTCCGTTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYQASAF*CPFLVL
Trigger: AAGAACAAGGAACGGACATCAGAAAGCAGAGGCCTG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp ACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAATACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: TWTFSSLHPCILLSKVKAILLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTAT...TGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR TCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGATAACTGGGGAGCTTaGAGCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKDNWGA*SRWYFH
Trigger: ATGAAAGTACCATCGGCTTCAAGCTCCCCAGTTATC...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGAGCATTGGCAGTATCTaGGATGGTGACAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERSIGSI*DGDSLS
Trigger: ACTCAAACTGTCACCATCTCAGATACTGCCAATGCT...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTGAGTTACTGGGAAACTaGATGCACTGGCCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCELLGN*MHWPVP
Trigger: AGGAACAGGCCAGTGCATTCAGTTTCCCAGTAACTC...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp ATCAGCTCTGTTCAATATCAGGACTTGGTATCCATTTATCAGCAGCTTTACCAAAGAGGTGGCACTTTTTaGGAGCCTTGTGTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: ISSVQYQDLVSIYQQLYQRGGTF*EPCVPR
Trigger: CCGAGGAACACAAGGCTCTCAAAAAGTGCCACCTCT...TTGGTAAAGCTGCTGATAAATGGATACCAAGTCCTGATATTGAACAGAGCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR GCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTTCTTCTTCAGAGACCTaGGACTTGGGCCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCSSSET*DLGLLR
Trigger: CCTCAAAAGGCCCAAGTCGCAGGTCTCTGAAGAAGA...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCGCTGTGTCTCTATACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: QERQTQPHKTSVITQPGIAVSLY*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTATAGAGACACAGC...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR GCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTCCCTCCAAGTCCTTTaGTTTGTGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERSLQVL*FVKINS
Trigger: GGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR GCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCCAGGGCAAGAAACTTaGTTTTGGGGATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYPGQET*FWGWCL
Trigger: CAGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR GCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTACTGACATGTCTGGATaGTGCTCCTTGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCTDMSG*CSLASL
Trigger: CAAGGAAGCCAAGGAGCAGCATCCAGACATGTCAGT...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCTTCCTTGGTCTGATTTaGAGCCAGTTTAAAATCACT +
Preference number: 4 (lower is better)
Translates to: QERQTQPHKTSVITQPGIFLGLI*SQFKIT
Trigger: AGTGATTTTAAACTGGCTCCAAATCAGACCAAGGAA...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGCCTGAGCTGGAGTCATaGACCTGTATGATTTATGCA +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERPELES*TCMIYA
Trigger: TGCATAAATCATACAGGTCCATGACTCCAGCTCAGG...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp TATGCACTGATTAGACACGCTAAGAAAAGGAGCGGTTATGGATCTTTTGGATTATGTCCGCTCAAAGTGTaGAGCAGGCCTGTCAATCAG +
Preference number: 4 (lower is better)
Translates to: YALIRHAKKRSGYGSFGLCPLKV*SRPVNQ
Trigger: CTGATTGACAGGCCTGCTCCACACTTTGAGCGGACA...TAATCCAAAAGATCCATAACCGCTCCTTTTCTTAGCGTGTCTAATCAGTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTCCTCCTTGCTGTTTATaGAGAGGGAGCCAGAACCAA +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCPPCCL*RGSQNQ
Trigger: TTGGTTCTGGCTCCCTCTCCATAAACAGCAAGGAGG...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS-3UTR TCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATGGGGGCCTTTAAAATaGTGTCTTCATCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKWGPLK*CLHQGC
Trigger: ACAGCCTTGATGAAGACATCATTTTAAAGGCCCCCA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAAGCATTGGCAGTATCTaGGATGGTGACAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKSIGSI*DGDSLS
Trigger: ACTCAAACTGTCACCATCTCAGATACTGCCAATGCT...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATCCCTCCAAGTCCTTTaGTTTGTGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKSLQVL*FVKINS
Trigger: GGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR GCA 90 bp AGCAACAGTGAGACAGAAGTTCATCTTGTTCCTCAGTGCTCAGTAGTATTGAGTTCCCTCCAAGTCCTTTaGTTTGTGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: SNSETEVHLVPQCSVVLSSLQVL*FVKINS
Trigger: GGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGA...ACTCAATACTACTGAGCACTGAGGAACAAGATGAACTTCTGTCTCACTGTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTTGGAGTGTCCCCATTaGATGCTTTCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYLECPH*MLSASA
Trigger: AGCAGAAGCTGAAAGCATCCAATGGGGACACTCCAA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTCAAGTCTTCATGTGTTaGAGTGTCCCCATTGGATGC +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCQVFMC*SVPIGC
Trigger: GCATCCAATGGGGACACTCCAACACATGAAGACTTG...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAACCTGAGCTGGAGTCATaGACCTGTATGATTTATGCA +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKPELES*TCMIYA
Trigger: TGCATAAATCATACAGGTCCATGACTCCAGCTCAGG...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp CAGAATAGAAGGATTTGTCTCAGATTCTGGTGTCAAGGTCACAAAGAGCAGGGATCACTGATGCTGGCATaGTGCTTTTTGATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QNRRICLRFWCQGHKEQGSLMLA*CFLISS
Trigger: AGAAGAGATCAAAAAGCACCATGCCAGCATCAGTGA...TCCCTGCTCTTTGTGACCTTGACACCAGAATCTGAGACAAATCCTTCTATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR TCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCATGTTTCTGTGTCTTCTaGCGGGCTTCTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSCFCVF*RASGRL
Trigger: AAGCCTCCCAGAAGCCCGTCAGAAGACACAGAAACA...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
CDS-3UTR TCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTTATCGGCATCTCCTGTaGTCACAATTCTCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCYRHLL*SQFSSR
Trigger: TCGAGAAGAGAATTGTGATCACAGGAGATGCCGATA...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCAGTCGTGACAGGCCTCTaGTTTCTGATGTCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSVVTGL*FLMSVP
Trigger: AGGAACGGACATCAGAAAGCAGAGGCCTGTCACGAC...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTTCCCTCCAAGTCCTTTaGTTTGTGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCSLQVL*FVKINS
Trigger: GGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGA...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR GCA 90 bp ATCAGCTCTGTTCAATATCAGGACTTGGTATCCATTTATCAGCAGCTTTACCAATCTCCAGTAGGGACTTaGCCGTTGATGTTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: ISSVQYQDLVSIYQQLYQSPVGT*PLMLRV
Trigger: GACTCTTAACATCAACGGGCAAGTCCCTACTGGAGA...TTGGTAAAGCTGCTGATAAATGGATACCAAGTCCTGATATTGAACAGAGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCAGTTGGCCTGAGTTTGTaGCTCCCTCTCCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSVGLSL*LPLLLP
Trigger: AGGAAGAAGGAGAGGGAGCCACAAACTCAGGCCAAC...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp TGGTGGGCCAATCCATCACTACTCCTTTTTCCTCACAATGTATACTCTGCAGAGTTCCTTGGTCTGATTTaGAGCCAGTTTAAAATCACT +
Preference number: 4 (lower is better)
Translates to: WWANPSLLLFPHNVYSAEFLGLI*SQFKIT
Trigger: AGTGATTTTAAACTGGCTCCAAATCAGACCAAGGAA...CTCTGCAGAGTATACATTGTGAGGAAAAAGGAGTAGTGATGGATTGGCCCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCATGTCCGCTCAAAGTGTaGAGCAGGCCTGTCAATCAG +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSCPLKV*SRPVNQ
Trigger: CTGATTGACAGGCCTGCTCCACACTTTGAGCGGACA...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCATCGGATGTGATGGTCTaGGCTGTCAGCAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSSDVMV*AVSKTP
Trigger: TGGAGTCTTGCTGACAGCCCAGACCATCACATCCGA...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCACCCACTTGGGCCTGTTaGCATCTCTTCAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSPTWAC*HLFSIK
Trigger: CTTGATGCTGAAGAGATGCCAACAGGCCCAAGTGGG...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
3UTR CAA 72 bp TCCAACTCAAAGAAACTACAATCCCTGCATTCAGGATaGATAAGCAAAGCTATGGAGAAGCTCCCCAACTTA +
Preference number: 4 (lower is better)
Translates to: SNSKKLQSLHSG*ISKAMEKLPNL
Trigger: TAAGTTGGGGAGCTTCTCCATAGCTTTGCTTATCAATCCTGAATGCAGGGATTGTAGTTTCTTTGAGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
3UTR CAA 72 bp AACGCAGAGAATGTGGGTAAAGACAAGGGCGCTGTGTaGGTCATGGAATTTTATGTTCCAGAGAAGAAATAT +
Preference number: 4 (lower is better)
Translates to: NAENVGKDKGAV*VMEFYVPEKKY
Trigger: ATATTTCTTCTCTGGAACATAAAATTCCATGACCAACACAGCGCCCTTGTCTTTACCCACATTCTCTGCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR TCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCACAGGCCTCTGCTTTCTaGTGTCCGTTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSQASAF*CPFLVL
Trigger: AAGAACAAGGAACGGACATCAGAAAGCAGAGGCCTG...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR TCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATCAAGTTCCTTGGTCTaGTTTGGAGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKSSSLV*FGASLK
Trigger: TTTTAAACTGGCTCCAAATCAGACCAAGGAACTTGA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR TCA 90 bp GCTGGAACAGCTGATGTTTGTCCTCTGATAACTATGACTATATCTTTTGAGCCCAAGTCCTTTGCTTTGTaGAGATCAACTCCATACATG +
Preference number: 4 (lower is better)
Translates to: AGTADVCPLITMTISFEPKSFAL*RSTPYM
Trigger: CATGTATGGAGTTGATCTTCACAAAGCAAAGGACTT...GGGCTCAAAAGATATAGTCATAGTTATCAGAGGACAAACATCAGCTGTTCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR TCA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTTTTTGATCTCTTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: KKQDQTPKHYSHICHYERFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAAGAGATCAAAAA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCAGCTTGTACAAGGACCTaGTCATGGTCGATATCGGCA +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSACTRT*SWSISA
Trigger: TGCCGATATCGACCATGATCAGGTCCTTGTACAAGC...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCTGATTCTACTTCTCTaGCTTCTTCTTCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYLILLL*LLLQRP
Trigger: AGGTCTCTGAAGAAGAAGGCAGAGAAGTAGAATCAG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCAACTGACATGTCTGGATaGTGCTCCTTGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSTDMSG*CSLASL
Trigger: CAAGGAAGCCAAGGAGCAGCATCCAGACATGTCAGT...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CCA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTCCGTTCCTTGTTCTTaGTCAAGTCTTCATGTGTTG +
Preference number: 4 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYSVPCS*SSLHVL
Trigger: CAACACATGAAGACTTGACCAAGAACAAGGAACGGA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTTCCGTTCCTTGTTCTTaGTCAAGTCTTCATGTGTTG +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCSVPCS*SSLHVL
Trigger: CAACACATGAAGACTTGACCAAGAACAAGGAACGGA...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTTCACTGATGCTGGCATaGTGCTTTTTGATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCSLMLA*CFLISS
Trigger: AGAAGAGATCAAAAAGCACCATGCCAGCATCAGTGA...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR TCA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTAAGTCCTTTGCTTTGTaGAGATCAACTCCATACATG +
Preference number: 4 (lower is better)
Translates to: SSFQPRIRILLIFQADVCKSFAL*RSTPYM
Trigger: CATGTATGGAGTTGATCTTCACAAAGCAAAGGACTT...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR GCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAAACTCTTATTTTGTATaGACTCAGGCTGTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKNSYFV*TQAVSL
Trigger: TAGAGACACAGCCTGAGTGCATACAAAATAAGAGTT...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105975.8
CDS-3UTR CCA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGTGTTCTTCCTGAGCTaGTTTAATAATCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKVFFLS*FNNPDH
Trigger: ATGATCTGGATTATTAAACCAGCTCAGGAAGAACAC...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105970.8
ENSMUST00000105975.8
3UTR CAA 72 bp AGCCAGGATCAGCCAGCAATAAATAAACATGGTTGTTaGCTTACTACAAGAAGAATCTCAAGAGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: SQDQPAINKHGC*LTTRRISRGPH
Trigger: ATGTGGACCTCTTGAGATTCTTCTTGTAGTAAGCAAACAACCATGTTTATTTATTGCTGGCTGATCCTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR TCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCAAGCATTGGCAGTATCTaGGATGGTGACAGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSSIGSI*DGDSLS
Trigger: ACTCAAACTGTCACCATCTCAGATACTGCCAATGCT...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCATCCCTCCAAGTCCTTTaGTTTGTGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSSLQVL*FVKINS
Trigger: GGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGA...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
3UTR CAA 72 bp GGTTTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTaGTCAAATGTAAACAACTACTTGATACGATTCATA +
Preference number: 4 (lower is better)
Translates to: GFRLDSAGIVPI*SNVNNYLIRFI
Trigger: TATGAATCGTATCAAGTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR TCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCACAGTATCTGAGATGGTaGCAGTTTGAGTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSQYLRW*QFESLP
Trigger: TGGTAAAGACTCAAACTGTCACCATCTCAGATACTG...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR GCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCACTGATTCTACTTCTCTaGCTTCTTCTTCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSLILLL*LLLQRP
Trigger: AGGTCTCTGAAGAAGAAGGCAGAGAAGTAGAATCAG...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR GCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCAAAGGAGACCTTACAGTaGATGTTTCTGTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSKETLQ*MFLCLL
Trigger: CAGAAGACACAGAAACATGCACTGTAAGGTCTCCTT...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
CDS-3UTR CCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCATCCGTTCCTTGTTCTTaGTCAAGTCTTCATGTGTTG +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSSVPCS*SSLHVL
Trigger: CAACACATGAAGACTTGACCAAGAACAAGGAACGGA...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCATCACTGATGCTGGCATaGTGCTTTTTGATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSSLMLA*CFLISS
Trigger: AGAAGAGATCAAAAAGCACCATGCCAGCATCAGTGA...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
3UTR CAA 72 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTaGACAGTTTCTGTATCACAATATAGAGGACATCCG +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEK*TVSVSQYRGHP
Trigger: CGGATGTCCTCTATATTGTGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR GCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCAGCTGTGTCTCTATACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSAVSLY*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTATAGAGACACAGC...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CCA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCAGTGTTCTTCCTGAGCTaGTTTAATAATCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSVFFLS*FNNPDH
Trigger: ATGATCTGGATTATTAAACCAGCTCAGGAAGAACAC...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000105970.8
ENSMUST00000105975.8
CDS CCA 90 bp TCTGAGCAATGGCTGGGGCAGAGGTGGGCCGAGGACTTCGGTCTGTaGACTCAGCAGCTGCTGCTCCATCGAGGCTCCTGGACGCCCGCT +
Preference number: 5 (lower is better)
Translates to: SEQWLGQRWAEDFGL*TQQLLLHRGSWTPA
Trigger: AGCGGGCGTCCAGGAGCCTCGATGGAGCAGCAGCTGCTGAGTCCACAGACCGAAGTCCTCGGCCCACCTCTGCCCCAGCCATTGCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
CDS CCA 90 bp GATAGGTGCCCCTGGCCCTTCTGTGACCTGACTCTGAGCAATGGCTaGGGCAGAGGTGGGCCGAGGACTTCGGTCTGTGGACTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: DRCPWPFCDLTLSNG*GRGGPRTSVCGLSS
Trigger: GCTGCTGAGTCCACAGACCGAAGTCCTCGGCCCACCTCTGCCCCAGCCATTGCTCAGAGTCAGGTCACAGAAGGGCCAGGGGCACCTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCAGGGTCTAAGTCCCCATaGCTGTCCTCAGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSGSKSP*LSSVWA
Trigger: TGCCCAGACTGAGGACAGCAATGGGGACTTAGACCC...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS GCA 90 bp GAGTGTCCCCATTGGATGCTTTCAGCTTCTGCTCACCCTGATCGCTaGCCTCAGCTGCGGCCGCTTGGGAGGCCTCCTCCAGCTGAGTTT +
Preference number: 5 (lower is better)
Translates to: ECPHWMLSASAHPDR*PQLRPLGRPPPAEF
Trigger: AAACTCAGCTGGAGGAGGCCTCCCAAGCGGCCGCAGCTGAGGGCAGCGATCAGGGTGAGCAGAAGCTGAAAGCATCCAATGGGGACACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCATCTCCAGGCCGGATCTaGATGAAGAAGCTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSSPGRI*MKKLLR
Trigger: ACGCAGCAGCTTCTTCATCAAGATCCGGCCTGGAGA...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGAAATCAGGGCACTGGCTaGCCTGGTCTGAGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGNQGTG*PGLSLS
Trigger: ACTCAAGCTCAGACCAGGCAAGCCAGTGCCCTGATT...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCTGTGTAGATAAGCGCTaGTCCCACTCGCTGGGCCGT +
Preference number: 5 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSCVDKR*SHSLGR
Trigger: ACGGCCCAGCGAGTGGGACAAGCGCTTATCTACACA...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGATGTGTAGATAAGCGCTaGTCCCACTCGCTGGGCCGT +
Preference number: 5 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGCVDKR*SHSLGR
Trigger: ACGGCCCAGCGAGTGGGACAAGCGCTTATCTACACA...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGAGGGTCTAAGTCCCCATaGCTGTCCTCAGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGGSKSP*LSSVWA
Trigger: TGCCCAGACTGAGGACAGCAATGGGGACTTAGACCC...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCGGGTCTAAGTCCCCATaGCTGTCCTCAGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSGSKSP*LSSVWA
Trigger: TGCCCAGACTGAGGACAGCAATGGGGACTTAGACCC...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS GCA 90 bp ATTGGATGCTTTCAGCTTCTGCTCACCCTGATCGCTGCCCTCAGCTaGGGCCGCTTGGGAGGCCTCCTCCAGCTGAGTTTCTTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: IGCFQLLLTLIAALS*GRLGGLLQLSFLLA
Trigger: GGCCAACAAGAAACTCAGCTGGAGGAGGCCTCCCAAGCGGCCGCAGCTGAGGGCAGCGATCAGGGTGAGCAGAAGCTGAAAGCATCCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGACTTGTTGGCCTGAGTTaGTGGCTCCCTCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGLVGLS*WLPLLL
Trigger: AAGAAGGAGAGGGAGCCACAAACTCAGGCCAACAAG...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGAGTTGGAGTGTCCCCATaGGATGCTTTCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGVGVSP*DAFSFC
Trigger: GCAGAAGCTGAAAGCATCCAATGGGGACACTCCAAC...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCCGAGTAGGGCTAAAGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: PAVGGHVSGVCDQGACPARVGLK*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACTTTAGCCCTACTCG...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCACGAGTAGGGCTAAAGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSRVGLK*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACTTTAGCCCTACTCG...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCAATCAGGGCACTGGCTaGCCTGGTCTGAGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSNQGTG*PGLSLS
Trigger: ACTCAAGCTCAGACCAGGCAAGCCAGTGCCCTGATT...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCAGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSVGTCP*MLRVRK
Trigger: CTTCCGGACTCTTAACATCAACGGGCAAGTCCCTAC...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGGGGTCTAAGTCCCCATaGCTGTCCTCAGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAGSKSP*LSSVWA
Trigger: TGCCCAGACTGAGGACAGCAATGGGGACTTAGACCC...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCTGCTCCTTGGCTTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: PAVGGHVSGVCDQGACPACSLAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGCA...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCATGCTCCTTGGCTTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSCSLAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGCA...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGATCTGGATGCTGCTCCTaGGCTTCCTTGATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGSGCCS*ASLMAC
Trigger: ACAAGCCATCAAGGAAGCCAAGGAGCAGCATCCAGA...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCCCCCACTTGGGCCTGTaGGCATCTCTTCAGCATCAA +
Preference number: 5 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSPHLGL*ASLQHQ
Trigger: TTGATGCTGAAGAGATGCCAACAGGCCCAAGTGGGG...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS TCA 90 bp TGCGGCCGCTTGGGAGGCCTCCTCCAGCTGAGTTTCTTGTTGGCCTaGGTTTGTGGCTCCCTCTCCTTCTTCCTTCTGTTGCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: CGRLGGLLQLSFLLA*VCGSLSFFLLLLVL
Trigger: CAGCACCAGCAACAGAAGGAAGAAGGAGAGGGAGCCACAAACTCAGGCCAACAAGAAACTCAGCTGGAGGAGGCCTCCCAAGCGGCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTCTTCTTCCAAAAGGTaGAGGTGCTCGCACACTCGC +
Preference number: 5 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSSSSKR*RCSHTR
Trigger: GCGAGTGTGCGAGCACCTCAACCTTTTGGAAGAAGA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCCGAGTAGGGCTAAAGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSRVGLK*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACTTTAGCCCTACTCG...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGTCTCCAGGCCGGATCTaGATGAAGAAGCTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRASPGRI*MKKLLR
Trigger: ACGCAGCAGCTTCTTCATCAAGATCCGGCCTGGAGA...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCCCCAGGGCAAGAAACTaGCTTTTGGGGATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSPRARN*LLGMVS
Trigger: AGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGGG...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCCCCAGGGCAAGAAACTaGCTTTTGGGGATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSPRARN*LLGMVS
Trigger: AGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGGG...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCCCACTGTATCGGAATTaGGATCCCAGGGCAAGAAAC +
Preference number: 5 (lower is better)
Translates to: PAVGGHVSGVCDQGACPAPLYRN*DPRARN
Trigger: GTTTCTTGCCCTGGGATCCAAATTCCGATACAGTGG...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCACCACTGTATCGGAATTaGGATCCCAGGGCAAGAAAC +
Preference number: 5 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSPLYRN*DPRARN
Trigger: GTTTCTTGCCCTGGGATCCAAATTCCGATACAGTGG...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGGGGTCTAAGTCCCCATaGCTGTCCTCAGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEGSKSP*LSSVWA
Trigger: TGCCCAGACTGAGGACAGCAATGGGGACTTAGACCC...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCTGCTCCTTGGCTTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSCSLAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGCA...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGATCTGGATGCTGCTCCTaGGCTTCCTTGATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGSGCCS*ASLMAC
Trigger: ACAAGCCATCAAGGAAGCCAAGGAGCAGCATCCAGA...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCTCTGGATGCTGCTCCTaGGCTTCCTTGATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSSGCCS*ASLMAC
Trigger: ACAAGCCATCAAGGAAGCCAAGGAGCAGCATCCAGA...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS CCA 90 bp CGCCTCCTTGCTGTTTATGGAGAGGGAGCCAGAACCAAAGCTCTGTaGAGACGCCGGCGGAGTGGTCATCAGGCTCTGACTAGGAACTAC +
Preference number: 5 (lower is better)
Translates to: RLLAVYGEGARTKAL*RRRRSGHQALTRNY
Trigger: GTAGTTCCTAGTCAGAGCCTGATGACCACTCCGCCGGCGTCTCCACAGAGCTTTGGTTCTGGCTCCCTCTCCATAAACAGCAAGGAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGTTGGCCTGAGTTaGTGGCTCCCTCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRALVGLS*WLPLLL
Trigger: AAGAAGGAGAGGGAGCCACAAACTCAGGCCAACAAG...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGATCAAGTCTTCATGTGTaGGAGTGTCCCCATTGGATG +
Preference number: 5 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGSSLHV*ECPHWM
Trigger: CATCCAATGGGGACACTCCAACACATGAAGACTTGA...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCATCAAGTCTTCATGTGTaGGAGTGTCCCCATTGGATG +
Preference number: 5 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSSSLHV*ECPHWM
Trigger: CATCCAATGGGGACACTCCAACACATGAAGACTTGA...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGTGCGACTTGGGCCTTTaGAGGAATGAGGAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRACDLGL*RNEESS
Trigger: ACTGCTCTCCTCATTCCTCAAAAGGCCCAAGTCGCA...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCTCGCTTCAGCAAGTCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: PAVGGHVSGVCDQGACPASLQQV*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGACTTGCTGAAGCGA...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGTCTCCAGGCCGGATCTaGATGAAGAAGCTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWSPGRI*MKKLLR
Trigger: ACGCAGCAGCTTCTTCATCAAGATCCGGCCTGGAGA...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGAGCAAGAAACTTGCTTTaGGGGATGGTGTCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGARNLL*GMVSVE
Trigger: CTCTACAGACACCATCCCCAAAAGCAAGTTTCTTGC...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGAATCAGGGCACTGGCTaGCCTGGTCTGAGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWNQGTG*PGLSLS
Trigger: ACTCAAGCTCAGACCAGGCAAGCCAGTGCCCTGATT...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTGTGTAGATAAGCGCTaGTCCCACTCGCTGGGCCGT +
Preference number: 5 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATCVDKR*SHSLGR
Trigger: ACGGCCCAGCGAGTGGGACAAGCGCTTATCTACACA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAVGTCP*MLRVRK
Trigger: CTTCCGGACTCTTAACATCAACGGGCAAGTCCCTAC...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCAATCTCCAGTAGGGACTaGCCCGTTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSISSRD*PVDVKS
Trigger: ACTCTTAACATCAACGGGCAAGTCCCTACTGGAGAT...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTGGGTCTAAGTCCCCATaGCTGTCCTCAGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATGSKSP*LSSVWA
Trigger: TGCCCAGACTGAGGACAGCAATGGGGACTTAGACCC...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGTGCTCCTTGGCTTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRACSLAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGCA...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGGGAACTACTGACTGTTaGGGGCACTCCCATTCAGAG +
Preference number: 5 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAGTTDC*GHSHSE
Trigger: CTCTGAATGGGAGTGCCCCAAACAGTCAGTAGTTCC...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS-3UTR CAA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTTTTCCCCACCGAGTaGCAGCTGGCAGGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPLFPTE*QLAGSW
Trigger: CCAGCTTCCTGCCAGCTGCAACTCGGTGGGGAAAAG...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS TCA 90 bp GAACCAAAGCTCTGTGGAGACGCCGGCGGAGTGGTCATCAGGCTCTaGCTAGGAACTACTGACTGTTTGGGGCACTCCCATTCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: EPKLCGDAGGVVIRL*LGTTDCLGHSHSEA
Trigger: TGCCTCTGAATGGGAGTGCCCCAAACAGTCAGTAGTTCCTAGTCAGAGCCTGATGACCACTCCGCCGGCGTCTCCACAGAGCTTTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS TCA 90 bp CCCCACCGAGTTGCAGCTGGCAGGAAGCTGGAGTTACTGGGAAACTaGATGCACTGGCCTGTTCCTCCACTCCTAAGCATTCCCCACTTG +
Preference number: 5 (lower is better)
Translates to: PHRVAAGRKLELLGN*MHWPVPPLLSIPHL
Trigger: CAAGTGGGGAATGCTTAGGAGTGGAGGAACAGGCCAGTGCATTCAGTTTCCCAGTAACTCCAGCTTCCTGCCAGCTGCAACTCGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS GCA 90 bp CATCAAGATAGCCAGCTGCCCCCTGCTCCTTCTCTTCCGCCTCCTTaGTGTTTATGGAGAGGGAGCCAGAACCAAAGCTCTGTGGAGACG +
Preference number: 5 (lower is better)
Translates to: HQDSQLPPAPSLPPP*CLWRGSQNQSSVET
Trigger: CGTCTCCACAGAGCTTTGGTTCTGGCTCCCTCTCCATAAACAGCAAGGAGGCGGAAGAGAAGGAGCAGGGGGCAGCTGGCTATCTTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS CCA 90 bp GCTACTGTCTGCCTTTTCCCCACCGAGTTGCAGCTGGCAGGAAGCTaGAGTTACTGGGAAACTGAATGCACTGGCCTGTTCCTCCACTCC +
Preference number: 5 (lower is better)
Translates to: ATVCLFPTELQLAGS*SYWETECTGLFLHS
Trigger: GGAGTGGAGGAACAGGCCAGTGCATTCAGTTTCCCAGTAACTCCAGCTTCCTGCCAGCTGCAACTCGGTGGGGAAAAGGCAGACAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS CCA 90 bp CCCAGCTCTTCGCTACTGTCTGCCTTTTCCCCACCGAGTTGCAGCTaGCAGGAAGCTGGAGTTACTGGGAAACTGAATGCACTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: PSSSLLSAFSPPSCS*QEAGVTGKLNALAC
Trigger: ACAGGCCAGTGCATTCAGTTTCCCAGTAACTCCAGCTTCCTGCCAGCTGCAACTCGGTGGGGAAAAGGCAGACAGTAGCGAAGAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTTGGAGTGTCCCCATaGGATGCTTTCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GGPTELALSSNSWQGLWKVGVSP*DAFSFC
Trigger: GCAGAAGCTGAAAGCATCCAATGGGGACACTCCAAC...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCAGTCCGTTCCTTGTTCTaGGTCAAGTCTTCATGTGTT +
Preference number: 5 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSVRSLF*VKSSCV
Trigger: AACACATGAAGACTTGACCAAGAACAAGGAACGGAC...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGTGCGACTTGGGCCTTTaGAGGAATGAGGAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWCDLGL*RNEESS
Trigger: ACTGCTCTCCTCATTCCTCAAAAGGCCCAAGTCGCA...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCAAAGATGGGTCTGTTTaGAGCTCAGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSKDGSV*SSGSGA
Trigger: AGCTCCTGAACCTGAGCTCAAAACAGACCCATCTTT...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTCGCTTCAGCAAGTCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSSLQQV*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGACTTGCTGAAGCGA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGTCTTCTTCCAAAAGGTaGAGGTGCTCGCACACTCGC +
Preference number: 5 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWSSSKR*RCSHTR
Trigger: GCGAGTGTGCGAGCACCTCAACCTTTTGGAAGAAGA...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGCGAGTAGGGCTAAAGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAERVGLK*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACTTTAGCCCTACTCG...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGCGAGTAGGGCTAAAGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWRVGLK*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACTTTAGCCCTACTCG...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGACTCCCTCCAAGTCCTTaGCTTTGTGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGLPPSP*LCEDQL
Trigger: GAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGAG...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCCTCCCTCCAAGTCCTTaGCTTTGTGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSLPPSP*LCEDQL
Trigger: GAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGAG...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGAGAAATCTTTAGCACTTaGGGCCAAGGAAAGCGGTTA +
Preference number: 5 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGEIFST*GQGKRL
Trigger: TAACCGCTTTCCTTGGCCCAAAGTGCTAAAGATTTC...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTCTCCAGGCCGGATCTaGATGAAGAAGCTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQSPGRI*MKKLLR
Trigger: ACGCAGCAGCTTCTTCATCAAGATCCGGCCTGGAGA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTCTCCAGGCCGGATCTaGATGAAGAAGCTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATSPGRI*MKKLLR
Trigger: ACGCAGCAGCTTCTTCATCAAGATCCGGCCTGGAGA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCACTTTCATAATGTTCTaGCTCTCCAGGCCGGATCTT +
Preference number: 5 (lower is better)
Translates to: PAVGGHVSGVCDQGACPATFIMF*LSRPDL
Trigger: AAGATCCGGCCTGGAGAGCAAGAACATTATGAAAGT...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGAGCAAGAAACTTGCTTTaGGGGATGGTGTCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGARNLL*GMVSVE
Trigger: CTCTACAGACACCATCCCCAAAAGCAAGTTTCTTGC...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGCCCAGGGCAAGAAACTaGCTTTTGGGGATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: GGPTELALSSNSWQGLWKPRARN*LLGMVS
Trigger: AGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGGG...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGAATCAGGGCACTGGCTaGCCTGGTCTGAGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQNQGTG*PGLSLS
Trigger: ACTCAAGCTCAGACCAGGCAAGCCAGTGCCCTGATT...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATGTGTAGATAAGCGCTaGTCCCACTCGCTGGGCCGT +
Preference number: 5 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTCVDKR*SHSLGR
Trigger: ACGGCCCAGCGAGTGGGACAAGCGCTTATCTACACA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: GGPTELALSSNSWQGLWKVGTCP*MLRVRK
Trigger: CTTCCGGACTCTTAACATCAACGGGCAAGTCCCTAC...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWVGTCP*MLRVRK
Trigger: CTTCCGGACTCTTAACATCAACGGGCAAGTCCCTAC...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGAATCTCCAGTAGGGACTaGCCCGTTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGISSRD*PVDVKS
Trigger: ACTCTTAACATCAACGGGCAAGTCCCTACTGGAGAT...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCATCTCCAGTAGGGACTaGCCCGTTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSISSRD*PVDVKS
Trigger: ACTCTTAACATCAACGGGCAAGTCCCTACTGGAGAT...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGATCACTTTTCACAGCATaGGCAGTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGSLFTA*AVSEMV
Trigger: CACCATCTCAGATACTGCCAATGCTGTGAAAAGTGA...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp TGGGGAGCCCTCGGCAAAGCTGCTGTTTCCAAGGAGGGACAGGGCAGCTGGGGACCACCTTTTACAGTCTaGGTAATCTGTGTCGTGGTT +
Preference number: 5 (lower is better)
Translates to: WGALGKAAVSKEGQGSWGPPFTV*VICVVV
Trigger: AACCACGACACAGATTACCAAGACTGTAAAAGGTGG...TCCCCAGCTGCCCTGTCCCTCCTTGGAAACAGCAGCTTTGCCGAGGGCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp CCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTTGCCCTGCCCCACCTTTTACAGTCTaGGTAATCTGTGTCGTGGTT +
Preference number: 5 (lower is better)
Translates to: PAVGGHVSGVCDQGACPAPPFTV*VICVVV
Trigger: AACCACGACACAGATTACCAAGACTGTAAAAGGTGG...GGCAGGGCAAGCGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCACCACCTTTTACAGTCTaGGTAATCTGTGTCGTGGTT +
Preference number: 5 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSPPFTV*VICVVV
Trigger: AACCACGACACAGATTACCAAGACTGTAAAAGGTGG...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGTCTGGATGCTGCTCCTaGGCTTCCTTGATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWSGCCS*ASLMAC
Trigger: ACAAGCCATCAAGGAAGCCAAGGAGCAGCATCCAGA...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGTCCTTCTTCCTTCTGTaGCTGGTGCTGAGAATTCTC +
Preference number: 5 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRASFFLL*LVLRIL
Trigger: GAGAATTCTCAGCACCAGCAACAGAAGGAAGAAGGA...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGCTTGTTGGCCTGAGTTaGTGGCTCCCTCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQLVGLS*WLPLLL
Trigger: AAGAAGGAGAGGGAGCCACAAACTCAGGCCAACAAG...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGATCTGATGTCCGTTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAACGGACATCAGA...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGTCGCTTCAGCAAGTCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRASLQQV*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGACTTGCTGAAGCGA...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTCTTCTTCCAAAAGGTaGAGGTGCTCGCACACTCGC +
Preference number: 5 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATSSSKR*RCSHTR
Trigger: GCGAGTGTGCGAGCACCTCAACCTTTTGGAAGAAGA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTCTTCTTCCAAAAGGTaGAGGTGCTCGCACACTCGC +
Preference number: 5 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQSSSKR*RCSHTR
Trigger: GCGAGTGTGCGAGCACCTCAACCTTTTGGAAGAAGA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGCGAGTAGGGCTAAAGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQRVGLK*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACTTTAGCCCTACTCG...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCTCCCTCCAAGTCCTTaGCTTTGTGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRALPPSP*LCEDQL
Trigger: GAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGAG...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATCTCCAGGCCGGATCTaGATGAAGAAGCTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTSPGRI*MKKLLR
Trigger: ACGCAGCAGCTTCTTCATCAAGATCCGGCCTGGAGA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCACTTTCATAATGTTCTaGCTCTCCAGGCCGGATCTT +
Preference number: 5 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSTFIMF*LSRPDL
Trigger: AAGATCCGGCCTGGAGAGCAAGAACATTATGAAAGT...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTCCCAGGGCAAGAAACTaGCTTTTGGGGATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATPRARN*LLGMVS
Trigger: AGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGGG...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAAATCAGGGCACTGGCTaGCCTGGTCTGAGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTNQGTG*PGLSLS
Trigger: ACTCAAGCTCAGACCAGGCAAGCCAGTGCCCTGATT...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATGTGTAGATAAGCGCTaGTCCCACTCGCTGGGCCGT +
Preference number: 5 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISCVDKR*SHSLGR
Trigger: ACGGCCCAGCGAGTGGGACAAGCGCTTATCTACACA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATVGTCP*MLRVRK
Trigger: CTTCCGGACTCTTAACATCAACGGGCAAGTCCCTAC...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQVGTCP*MLRVRK
Trigger: CTTCCGGACTCTTAACATCAACGGGCAAGTCCCTAC...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGATCTCCAGTAGGGACTaGCCCGTTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAISSRD*PVDVKS
Trigger: ACTCTTAACATCAACGGGCAAGTCCCTACTGGAGAT...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp CAGACAGAGGCGGCAGCAGAGGGACAGAGTTCAGGTACCCCAGGTCTGAGGTCCTCACTTTTCACAGCATaGGCAGTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: QTEAAAEGQSSGTPGLRSSLFTA*AVSEMV
Trigger: CACCATCTCAGATACTGCCAATGCTGTGAAAAGTGA...GGACCTCAGACCTGGGGTACCTGAACTCTGTCCCTCTGCTGCCGCCTCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAGGGTCTAAGTCCCCATaGCTGTCCTCAGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIGSKSP*LSSVWA
Trigger: TGCCCAGACTGAGGACAGCAATGGGGACTTAGACCC...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCCCACCTTTTACAGTCTaGGTAATCTGTGTCGTGGTT +
Preference number: 5 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSPPFTV*VICVVV
Trigger: AACCACGACACAGATTACCAAGACTGTAAAAGGTGG...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp TGGGTGGGGAGTAGCAGAGCTCACTCACACCCTGACCAGGGATGGCCACCAGGACCACCTTTTACAGTCTaGGTAATCTGTGTCGTGGTT +
Preference number: 5 (lower is better)
Translates to: WVGSSRAHSHPDQGWPPGPPFTV*VICVVV
Trigger: AACCACGACACAGATTACCAAGACTGTAAAAGGTGG...TCCTGGTGGCCATCCCTGGTCAGGGTGTGAGTGAGCTCTGCTACTCCCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTGCTCCTTGGCTTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATCSLAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGCA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTCTGGATGCTGCTCCTaGGCTTCCTTGATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQSGCCS*ASLMAC
Trigger: ACAAGCCATCAAGGAAGCCAAGGAGCAGCATCCAGA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTTCTCTTCCGCCTCCTaGCTGTTTATGGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQFSSAS*LFMERE
Trigger: CTCCCTCTCCATAAACAGCAAGGAGGCGGAAGAGAA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS-3UTR CAA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGTCCTTCTTCCTTCTGTaGCTGGTGCTGAGAATTCTC +
Preference number: 5 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWSFFLL*LVLRIL
Trigger: GAGAATTCTCAGCACCAGCAACAGAAGGAAGAAGGA...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACACTTGTTGGCCTGAGTTaGTGGCTCCCTCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTLVGLS*WLPLLL
Trigger: AAGAAGGAGAGGGAGCCACAAACTCAGGCCAACAAG...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTTGTTGGCCTGAGTTaGTGGCTCCCTCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPLVGLS*WLPLLL
Trigger: AAGAAGGAGAGGGAGCCACAAACTCAGGCCAACAAG...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTGTTGGAGTGTCCCCATaGGATGCTTTCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPVGVSP*DAFSFC
Trigger: GCAGAAGCTGAAAGCATCCAATGGGGACACTCCAAC...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTCAAGTCTTCATGTGTaGGAGTGTCCCCATTGGATG +
Preference number: 5 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAESSLHV*ECPHWM
Trigger: CATCCAATGGGGACACTCCAACACATGAAGACTTGA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGGTCCGTTCCTTGTTCTaGGTCAAGTCTTCATGTGTT +
Preference number: 5 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAVRSLF*VKSSCV
Trigger: AACACATGAAGACTTGACCAAGAACAAGGAACGGAC...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGAAAGATGGGTCTGTTTaGAGCTCAGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWKDGSV*SSGSGA
Trigger: AGCTCCTGAACCTGAGCTCAAAACAGACCCATCTTT...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTTCTTCTTCCAAAAGGTaGAGGTGCTCGCACACTCGC +
Preference number: 5 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPSSSKR*RCSHTR
Trigger: GCGAGTGTGCGAGCACCTCAACCTTTTGGAAGAAGA...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGCTCCCTCCAAGTCCTTaGCTTTGTGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: GGPTELALSSNSWQGLWKLPPSP*LCEDQL
Trigger: GAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGAG...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGGAAATCTTTAGCACTTaGGGCCAAGGAAAGCGGTTA +
Preference number: 5 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAEIFST*GQGKRL
Trigger: TAACCGCTTTCCTTGGCCCAAAGTGCTAAAGATTTC...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACACCCAGGGCAAGAAACTaGCTTTTGGGGATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTPRARN*LLGMVS
Trigger: AGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGGG...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAGATGGCATTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: PFLPCIPVSCYPRSRQMALPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...TGCCATCTGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAAATCAGGGCACTGGCTaGCCTGGTCTGAGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: HSYSSISQNGPGPSDPRINQGTG*PGLSLS
Trigger: ACTCAAGCTCAGACCAGGCAAGCCAGTGCCCTGATT...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAAATCAGGGCACTGGCTaGCCTGGTCTGAGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISNQGTG*PGLSLS
Trigger: ACTCAAGCTCAGACCAGGCAAGCCAGTGCCCTGATT...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCTGTGTAGATAAGCGCTaGTCCCACTCGCTGGGCCGT +
Preference number: 5 (lower is better)
Translates to: PQLVNLDLFFPASLYPAICVDKR*SHSLGR
Trigger: ACGGCCCAGCGAGTGGGACAAGCGCTTATCTACACA...GATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPVGTCP*MLRVRK
Trigger: CTTCCGGACTCTTAACATCAACGGGCAAGTCCCTAC...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGATCTCCAGTAGGGACTaGCCCGTTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWISSRD*PVDVKS
Trigger: ACTCTTAACATCAACGGGCAAGTCCCTACTGGAGAT...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp CACATGCTCAGCGGAGGGAGGGCTCGGCCTTCAACACCCTGCAGTGGGAGGTCAACAATAGGGACATCTTaGGTTGGGATTTCACTTTTC +
Preference number: 5 (lower is better)
Translates to: HMLSGGRARPSTPCSGRSTIGTS*VGISLF
Trigger: GAAAAGTGAAATCCCAACCAAAGATGTCCCTATTGT...TGACCTCCCACTGCAGGGTGTTGAAGGCCGAGCCCTCCCTCCGCTGAGCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp GCCTTCAACACCCTGCAGTGGGAGGTCATGTTTCTGGGGTCTGTGACCAGGGCGCCACCTTTTACAGTCTaGGTAATCTGTGTCGTGGTT +
Preference number: 5 (lower is better)
Translates to: AFNTLQWEVMFLGSVTRAPPFTV*VICVVV
Trigger: AACCACGACACAGATTACCAAGACTGTAAAAGGTGG...CGCCCTGGTCACAGACCCCAGAAACATGACCTCCCACTGCAGGGTGTTGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATGCTCCTTGGCTTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTCSLAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGCA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTTCTGGATGCTGCTCCTaGGCTTCCTTGATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPSGCCS*ASLMAC
Trigger: ACAAGCCATCAAGGAAGCCAAGGAGCAGCATCCAGA...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS CCA 90 bp ATCTGTGTCGTGGTTGTACTACTTGTGGTCTCGGATGTGATGGTCTaGGCTGTCAGCAAGACTCCAGGGTCTAAGTCCCCATTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: ICVVVVLLVVSDVMV*AVSKTPGSKSPLLS
Trigger: GGACAGCAATGGGGACTTAGACCCTGGAGTCTTGCTGACAGCCCAGACCATCACATCCGAGACCACAAGTAGTACAACCACGACACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS CCA 90 bp GTCTTTACCAGAGGAGGCTGGAAACTTCGAATGAGGGTGGGGAACTaGTTACCCACAGGTGAGTCAAGAAAGGATCCGCTCTGGGTCTCA +
Preference number: 5 (lower is better)
Translates to: VFTRGGWKLRMRVGN*LPTGESRKDPLWVS
Trigger: TGAGACCCAGAGCGGATCCTTTCTTGACTCACCTGTGGGTAACCAGTTCCCCACCCTCATTCGAAGTTTCCAGCCTCCTCTGGTAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTCCTTCTTCCTTCTGTaGCTGGTGCTGAGAATTCTC +
Preference number: 5 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQSFFLL*LVLRIL
Trigger: GAGAATTCTCAGCACCAGCAACAGAAGGAAGAAGGA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTCCTTCTTCCTTCTGTaGCTGGTGCTGAGAATTCTC +
Preference number: 5 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATSFFLL*LVLRIL
Trigger: GAGAATTCTCAGCACCAGCAACAGAAGGAAGAAGGA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CCAGCTCCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTCTTGTTGGCCTGAGTTaGTGGCTCCCTCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: PAPQLVNLDLFFPASLYPLVGLS*WLPLLL
Trigger: AAGAAGGAGAGGGAGCCACAAACTCAGGCCAACAAG...AGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATAGTTGGAGTGTCCCCATaGGATGCTTTCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIVGVSP*DAFSFC
Trigger: GCAGAAGCTGAAAGCATCCAATGGGGACACTCCAAC...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTCAAGTCTTCATGTGTaGGAGTGTCCCCATTGGATG +
Preference number: 5 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQSSLHV*ECPHWM
Trigger: CATCCAATGGGGACACTCCAACACATGAAGACTTGA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGGTCCGTTCCTTGTTCTaGGTCAAGTCTTCATGTGTT +
Preference number: 5 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWVRSLF*VKSSCV
Trigger: AACACATGAAGACTTGACCAAGAACAAGGAACGGAC...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGTCTGATGTCCGTTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAESDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAACGGACATCAGA...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGTCTGATGTCCGTTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: GGPTELALSSNSWQGLWKSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAACGGACATCAGA...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATGCGACTTGGGCCTTTaGAGGAATGAGGAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: HSYSSISQNGPGPSDPRICDLGL*RNEESS
Trigger: ACTGCTCTCCTCATTCCTCAAAAGGCCCAAGTCGCA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATGCGACTTGGGCCTTTaGAGGAATGAGGAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISCDLGL*RNEESS
Trigger: ACTGCTCTCCTCATTCCTCAAAAGGCCCAAGTCGCA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTAAAGATGGGTCTGTTTaGAGCTCAGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATKDGSV*SSGSGA
Trigger: AGCTCCTGAACCTGAGCTCAAAACAGACCCATCTTT...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTCGCTTCAGCAAGTCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQSLQQV*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGACTTGCTGAAGCGA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATCTTCTTCCAAAAGGTaGAGGTGCTCGCACACTCGC +
Preference number: 5 (lower is better)
Translates to: HSYSSISQNGPGPSDPRISSSKR*RCSHTR
Trigger: GCGAGTGTGCGAGCACCTCAACCTTTTGGAAGAAGA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCAGCTCCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTTCTTCTTCCAAAAGGTaGAGGTGCTCGCACACTCGC +
Preference number: 5 (lower is better)
Translates to: PAPQLVNLDLFFPASLYPSSSKR*RCSHTR
Trigger: GCGAGTGTGCGAGCACCTCAACCTTTTGGAAGAAGA...AGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGGAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATACGAGTAGGGCTAAAGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIRVGLK*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACTTTAGCCCTACTCG...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGGAAATCTTTAGCACTTaGGGCCAAGGAAAGCGGTTA +
Preference number: 5 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWEIFST*GQGKRL
Trigger: TAACCGCTTTCCTTGGCCCAAAGTGCTAAAGATTTC...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCCGGAGTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGGAAATCTTTAGCACTTaGGGCCAAGGAAAGCGGTTA +
Preference number: 5 (lower is better)
Translates to: PGVSLLGNIGLDCGWVAEEIFST*GQGKRL
Trigger: TAACCGCTTTCCTTGGCCCAAAGTGCTAAAGATTTC...CTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGACTCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGACTTTCATAATGTTCTaGCTCTCCAGGCCGGATCTT +
Preference number: 5 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWTFIMF*LSRPDL
Trigger: AAGATCCGGCCTGGAGAGCAAGAACATTATGAAAGT...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GGAGGTCCTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGACTTTCATAATGTTCTaGCTCTCCAGGCCGGATCTT +
Preference number: 5 (lower is better)
Translates to: GGPTELALSSNSWQGLWKTFIMF*LSRPDL
Trigger: AAGATCCGGCCTGGAGAGCAAGAACATTATGAAAGT...CTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAGGACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCACCCAGGGCAAGAAACTaGCTTTTGGGGATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISPRARN*LLGMVS
Trigger: AGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGGG...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCCACTGTATCGGAATTaGGATCCCAGGGCAAGAAAC +
Preference number: 5 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPPLYRN*DPRARN
Trigger: GTTTCTTGCCCTGGGATCCAAATTCCGATACAGTGG...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GAGGCCGGAGGCTGCCGTGGCTTCCCACTTTGCTCTTGCTTACTCCCCTTCAGCACAATAGGGACATCTTaGGTTGGGATTTCACTTTTC +
Preference number: 5 (lower is better)
Translates to: EAGGCRGFPLCSCLLPFSTIGTS*VGISLF
Trigger: GAAAAGTGAAATCCCAACCAAAGATGTCCCTATTGT...GCTGAAGGGGAGTAAGCAAGAGCAAAGTGGGAAGCCACGGCAGCCTCCGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp CTACTGAGCTGGCTCTGTCCTCTAACAGCTGGCAGGGTCTCTGGAAGGTCCTGGCCACCTTTTACAGTCTaGGTAATCTGTGTCGTGGTT +
Preference number: 5 (lower is better)
Translates to: LLSWLCPLTAGRVSGRSWPPFTV*VICVVV
Trigger: AACCACGACACAGATTACCAAGACTGTAAAAGGTGG...CCAGGACCTTCCAGAGACCCTGCCAGCTGTTAGAGGACAGAGCCAGCTCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS TCA 90 bp CTACTTCTCTGCCTTCTTCTTCAGAGACCTGCGACTTGGGCCTTTTaGGGAATGAGGAGAGCAGTCGTGACAGGCCTCTGCTTTCTGATG +
Preference number: 5 (lower is better)
Translates to: LLLCLLLQRPATWAF*GMRRAVVTGLCFLM
Trigger: CATCAGAAAGCAGAGGCCTGTCACGACTGCTCTCCTCATTCCTCAAAAGGCCCAAGTCGCAGGTCTCTGAAGAAGAAGGCAGAGAAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACATCGCTTCAGCAAGTCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTSLQQV*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGACTTGCTGAAGCGA...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAGATGGCACGAGTAGGGCTAAAGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: PFLPCIPVSCYPRSRQMARVGLK*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACTTTAGCCCTACTCG...TGCCATCTGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACACTCCCTCCAAGTCCTTaGCTTTGTGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTLPPSP*LCEDQL
Trigger: GAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGAG...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCTCTCCAGGCCGGATCTaGATGAAGAAGCTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: QERQTQPHKTSVITQPGISPGRI*MKKLLR
Trigger: ACGCAGCAGCTTCTTCATCAAGATCCGGCCTGGAGA...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGACTTTCATAATGTTCTaGCTCTCCAGGCCGGATCTT +
Preference number: 5 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQTFIMF*LSRPDL
Trigger: AAGATCCGGCCTGGAGAGCAAGAACATTATGAAAGT...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAGATGGCACCCAGGGCAAGAAACTaGCTTTTGGGGATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: PFLPCIPVSCYPRSRQMAPRARN*LLGMVS
Trigger: AGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGGG...TGCCATCTGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCACCACTGTATCGGAATTaGGATCCCAGGGCAAGAAAC +
Preference number: 5 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISPLYRN*DPRARN
Trigger: GTTTCTTGCCCTGGGATCCAAATTCCGATACAGTGG...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATACCACTGTATCGGAATTaGGATCCCAGGGCAAGAAAC +
Preference number: 5 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIPLYRN*DPRARN
Trigger: GTTTCTTGCCCTGGGATCCAAATTCCGATACAGTGG...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCAATCAGGGCACTGGCTaGCCTGGTCTGAGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: QERQTQPHKTSVITQPGINQGTG*PGLSLS
Trigger: ACTCAAGCTCAGACCAGGCAAGCCAGTGCCCTGATT...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGTCACTTTTCACAGCATaGGCAGTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQSLFTA*AVSEMV
Trigger: CACCATCTCAGATACTGCCAATGCTGTGAAAAGTGA...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTTCACTTTTCACAGCATaGGCAGTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATSLFTA*AVSEMV
Trigger: CACCATCTCAGATACTGCCAATGCTGTGAAAAGTGA...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTCCACCTTTTACAGTCTaGGTAATCTGTGTCGTGGTT +
Preference number: 5 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATPPFTV*VICVVV
Trigger: AACCACGACACAGATTACCAAGACTGTAAAAGGTGG...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATCCTTCTTCCTTCTGTaGCTGGTGCTGAGAATTCTC +
Preference number: 5 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISSFFLL*LVLRIL
Trigger: GAGAATTCTCAGCACCAGCAACAGAAGGAAGAAGGA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAGTCCGTTCCTTGTTCTaGGTCAAGTCTTCATGTGTT +
Preference number: 5 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTVRSLF*VKSSCV
Trigger: AACACATGAAGACTTGACCAAGAACAAGGAACGGAC...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCTGCGACTTGGGCCTTTaGAGGAATGAGGAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: QERQTQPHKTSVITQPGICDLGL*RNEESS
Trigger: ACTGCTCTCCTCATTCCTCAAAAGGCCCAAGTCGCA...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAAAAGATGGGTCTGTTTaGAGCTCAGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISKDGSV*SSGSGA
Trigger: AGCTCCTGAACCTGAGCTCAAAACAGACCCATCTTT...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATCGCTTCAGCAAGTCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: HSYSSISQNGPGPSDPRISLQQV*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGACTTGCTGAAGCGA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAGAAATCTTTAGCACTTaGGGCCAAGGAAAGCGGTTA +
Preference number: 5 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTEIFST*GQGKRL
Trigger: TAACCGCTTTCCTTGGCCCAAAGTGCTAAAGATTTC...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTACTTTCATAATGTTCTaGCTCTCCAGGCCGGATCTT +
Preference number: 5 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPTFIMF*LSRPDL
Trigger: AAGATCCGGCCTGGAGAGCAAGAACATTATGAAAGT...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: QERQTQPHKTSVITQPGIVGTCP*MLRVRK
Trigger: CTTCCGGACTCTTAACATCAACGGGCAAGTCCCTAC...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTTCACTTTTCACAGCATaGGCAGTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPSLFTA*AVSEMV
Trigger: CACCATCTCAGATACTGCCAATGCTGTGAAAAGTGA...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS CCA 90 bp GCAGTCGTGACAGGCCTCTGCTTTCTGATGTCCGTTCCTTGTTCTTaGTCAAGTCTTCATGTGTTGGAGTGTCCCCATTGGATGCTTTCA +
Preference number: 5 (lower is better)
Translates to: AVVTGLCFLMSVPCS*SSLHVLECPHWMLS
Trigger: TGAAAGCATCCAATGGGGACACTCCAACACATGAAGACTTGACCAAGAACAAGGAACGGACATCAGAAAGCAGAGGCCTGTCACGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp ACAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATGTTGGAGTGTCCCCATaGGATGCTTTCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: TRKANTAPQDLSDYTAWNVGVSP*DAFSFC
Trigger: GCAGAAGCTGAAAGCATCCAATGGGGACACTCCAAC...ATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATCTGATGTCCGTTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: HSYSSISQNGPGPSDPRISDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAACGGACATCAGA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATCTGATGTCCGTTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAACGGACATCAGA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp CCAGCTCCCCAGTTGGTCAACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTTCTGATGTCCGTTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PAPQLVNLDLFFPASLYPSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAACGGACATCAGA...AGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGTTGACCAACTGGGGAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp CCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAGATGGCATCGCTTCAGCAAGTCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: PFLPCIPVSCYPRSRQMASLQQV*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGACTTGCTGAAGCGA...TGCCATCTGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp CCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAGATGGCACTCCCTCCAAGTCCTTaGCTTTGTGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: PFLPCIPVSCYPRSRQMALPPSP*LCEDQL
Trigger: GAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGAG...TGCCATCTGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAGAAATCTTTAGCACTTaGGGCCAAGGAAAGCGGTTA +
Preference number: 5 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISEIFST*GQGKRL
Trigger: TAACCGCTTTCCTTGGCCCAAAGTGCTAAAGATTTC...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTGTGTAGATAAGCGCTaGTCCCACTCGCTGGGCCGT +
Preference number: 5 (lower is better)
Translates to: KKQDQTPKHYSHICHYERCVDKR*SHSLGR
Trigger: ACGGCCCAGCGAGTGGGACAAGCGCTTATCTACACA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp GGCTGTCTGCACTCAGGGATTAGGCATATAGTGATCAAATGTGTCTCAGTACAATGTGTAGATAAGCGCTaGTCCCACTCGCTGGGCCGT +
Preference number: 5 (lower is better)
Translates to: GCLHSGIRHIVIKCVSVQCVDKR*SHSLGR
Trigger: ACGGCCCAGCGAGTGGGACAAGCGCTTATCTACACA...TTGTACTGAGACACATTTGATCACTATATGCCTAATCCCTGAGTGCAGACAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATATCACTTTTCACAGCATaGGCAGTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: HSYSSISQNGPGPSDPRISLFTA*AVSEMV
Trigger: CACCATCTCAGATACTGCCAATGCTGTGAAAAGTGA...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCATCACTTTTCACAGCATaGGCAGTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISSLFTA*AVSEMV
Trigger: CACCATCTCAGATACTGCCAATGCTGTGAAAAGTGA...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp CCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTCTGTAAAGCAAACTGCCACTACAATAGGGACATCTTaGGTTGGGATTTCACTTTTC +
Preference number: 5 (lower is better)
Translates to: PSPFLSHLGSPSVKQTATTIGTS*VGISLF
Trigger: GAAAAGTGAAATCCCAACCAAAGATGTCCCTATTGT...AGTGGCAGTTTGCTTTACAGAGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp ATGAGCGAGCACTGGGGGTGCTGGCTAGGCCATAGCTACAGCTCCATTTCTCAGACAATAGGGACATCTTaGGTTGGGATTTCACTTTTC +
Preference number: 5 (lower is better)
Translates to: MSEHWGCWLGHSYSSISQTIGTS*VGISLF
Trigger: GAAAAGTGAAATCCCAACCAAAGATGTCCCTATTGT...CTGAGAAATGGAGCTGTAGCTATGGCCTAGCCAGCACCCCCAGTGCTCGCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp CATAGCTACAGCTCCATTTCTCAGAATGGGCCAGGGCCCTCAGACCCCAGAATACCACCTTTTACAGTCTaGGTAATCTGTGTCGTGGTT +
Preference number: 5 (lower is better)
Translates to: HSYSSISQNGPGPSDPRIPPFTV*VICVVV
Trigger: AACCACGACACAGATTACCAAGACTGTAAAAGGTGG...TATTCTGGGGTCTGAGGGCCCTGGCCCATTCTGAGAAATGGAGCTGTAGCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS GCA 90 bp GAGGGGAGGATAGAAGTTTTCTTCACTCCATCTCCAGTAGGGACTTaGCCGTTGATGTTAAGAGTCCGGAAGGGTGAGTGTGTAGATAAG +
Preference number: 5 (lower is better)
Translates to: EGRIEVFFTPSPVGT*PLMLRVRKGECVDK
Trigger: CTTATCTACACACTCACCCTTCCGGACTCTTAACATCAACGGGCAAGTCCCTACTGGAGATGGAGTGAAGAAAACTTCTATCCTCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141291.3
ENSMUST00000212761.2
CDS CCA 90 bp TCCAGAGCACTCTTCAATCCCTTCTCCTTCCTTCGTTTCAGAATCTaGGTCCTCTCTGTGTTCTTCCTGAGCTGGCTGTGTCTCTATACT +
Preference number: 5 (lower is better)
Translates to: SRALFNPFSFLRFRI*VLSVFFLSWLCLYT
Trigger: AGTATAGAGACACAGCCAGCTCAGGAAGAACACAGAGAGGACCCAGATTCTGAAACGAAGGAAGGAGAAGGGATTGAAGAGTGCTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS CCA 90 bp GGGATTGGAATAGAAACCTTGGGAGCAATCTCTTCATTTTCGCGCTaGGGCAAGGTTCTCTCAGTGGATCTCTCTGGCCTTTTACTGTTC +
Preference number: 5 (lower is better)
Translates to: GIGIETLGAISSFSR*GKVLSVDLSGLLLF
Trigger: GAACAGTAAAAGGCCAGAGAGATCCACTGAGAGAACCTTGCCCCAGCGCGAAAATGAAGAGATTGCTCCCAAGGTTTCTATTCCAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp ACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCATCAAGTCTTCATGTGTaGGAGTGTCCCCATTGGATG +
Preference number: 5 (lower is better)
Translates to: TWTFSSLHPCILLSKVKASSLHV*ECPHWM
Trigger: CATCCAATGGGGACACTCCAACACATGAAGACTTGA...TGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp ACTTGGACCTTTTCTTCCCTGCATCCCTGTATCCTGCTATCCAAGGTCAAGGCAAAAGATGGGTCTGTTTaGAGCTCAGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: TWTFSSLHPCILLSKVKAKDGSV*SSGSGA
Trigger: AGCTCCTGAACCTGAGCTCAAAACAGACCCATCTTT...TGCCTTGACCTTGGATAGCAGGATACAGGGATGCAGGGAAGAAAAGGTCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp GGCTGTCTGCACTCAGGGATTAGGCATATAGTGATCAAATGTGTCTCAGTACAATCTCCAGGCCGGATCTaGATGAAGAAGCTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: GCLHSGIRHIVIKCVSVQSPGRI*MKKLLR
Trigger: ACGCAGCAGCTTCTTCATCAAGATCCGGCCTGGAGA...TTGTACTGAGACACATTTGATCACTATATGCCTAATCCCTGAGTGCAGACAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCGCAAGAAACTTGCTTTaGGGGATGGTGTCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: QERQTQPHKTSVITQPGIARNLL*GMVSVE
Trigger: CTCTACAGACACCATCCCCAAAAGCAAGTTTCTTGC...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp ACAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCCACTGTATCGGAATTaGGATCCCAGGGCAAGAAAC +
Preference number: 5 (lower is better)
Translates to: TRKANTAPQDLSDYTAWNPLYRN*DPRARN
Trigger: GTTTCTTGCCCTGGGATCCAAATTCCGATACAGTGG...ATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GGCTGTCTGCACTCAGGGATTAGGCATATAGTGATCAAATGTGTCTCAGTACAAAATCAGGGCACTGGCTaGCCTGGTCTGAGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: GCLHSGIRHIVIKCVSVQNQGTG*PGLSLS
Trigger: ACTCAAGCTCAGACCAGGCAAGCCAGTGCCCTGATT...TTGTACTGAGACACATTTGATCACTATATGCCTAATCCCTGAGTGCAGACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp TGGTGGGCCAATCCATCACTACTCCTTTTTCCTCACAATGTATACTCTGCAGAGGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: WWANPSLLLFPHNVYSAEVGTCP*MLRVRK
Trigger: CTTCCGGACTCTTAACATCAACGGGCAAGTCCCTAC...CTCTGCAGAGTATACATTGTGAGGAAAAAGGAGTAGTGATGGATTGGCCCACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCATCTCCAGTAGGGACTaGCCCGTTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: QERQTQPHKTSVITQPGIISSRD*PVDVKS
Trigger: ACTCTTAACATCAACGGGCAAGTCCCTACTGGAGAT...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp CCTCCCCCTGCCCCTCAATCTTTCTACCTGGACAGAGCCTGTTCTTCACACACAACAATAGGGACATCTTaGGTTGGGATTTCACTTTTC +
Preference number: 5 (lower is better)
Translates to: PPPAPQSFYLDRACSSHTTIGTS*VGISLF
Trigger: GAAAAGTGAAATCCCAACCAAAGATGTCCCTATTGT...TGTGTGTGAAGAACAGGCTCTGTCCAGGTAGAAAGATTGAGGGGCAGGGGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp TTCACTTCTGAGAATGGAACCCAAGCCCATTTCTCTCCCACCTGGGCTCCCCCTACAATAGGGACATCTTaGGTTGGGATTTCACTTTTC +
Preference number: 5 (lower is better)
Translates to: FTSENGTQAHFSPTWAPPTIGTS*VGISLF
Trigger: GAAAAGTGAAATCCCAACCAAAGATGTCCCTATTGT...AGGGGGAGCCCAGGTGGGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCTTTTCCCCACCGAGTaGCAGCTGGCAGGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYLFPTE*QLAGSW
Trigger: CCAGCTTCCTGCCAGCTGCAACTCGGTGGGGAAAAG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS TCA 90 bp ATTTCACTTTTCACAGCATTGGCAGTATCTGAGATGGTGACAGTTTaGGTCTTTACCAGAGGAGGTCCATCTCCAGTAGGGACTTGCCCG +
Preference number: 5 (lower is better)
Translates to: ISLFTALAVSEMVTV*VFTRGGPSPVGTCP
Trigger: CGGGCAAGTCCCTACTGGAGATGGACCTCCTCTGGTAAAGACTCAAACTGTCACCATCTCAGATACTGCCAATGCTGTGAAAAGTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS GCA 90 bp TCCTCTGTTCGAATGCCATTTACACTTCCATCTCCAGTAGGGACTTaGCCGTTGATGTTAAGAGTCCGGAAGGGTGAGTGTGTAGATAAG +
Preference number: 5 (lower is better)
Translates to: SSVRMPFTLPSPVGT*PLMLRVRKGECVDK
Trigger: CTTATCTACACACTCACCCTTCCGGACTCTTAACATCAACGGGCAAGTCCCTACTGGAGATGGAAGTGTAAATGGCATTCGAACAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS-3UTR CAA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTGCGACTTGGGCCTTTaGAGGAATGAGGAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: KKQDQTPKHYSHICHYERCDLGL*RNEESS
Trigger: ACTGCTCTCCTCATTCCTCAAAAGGCCCAAGTCGCA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGCGAGTAGGGCTAAAGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: KKQDQTPKHYSHICHYERRVGLK*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACTTTAGCCCTACTCG...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp CAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATCGAAATCTTTAGCACTTaGGGCCAAGGAAAGCGGTTA +
Preference number: 5 (lower is better)
Translates to: QERQTQPHKTSVITQPGIEIFST*GQGKRL
Trigger: TAACCGCTTTCCTTGGCCCAAAGTGCTAAAGATTTC...GATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp CTAAGACCTTTCAGACCCAAGCATCAGACGTGCTGTCTTTCTGCATCCTTGCAGACTTTCATAATGTTCTaGCTCTCCAGGCCGGATCTT +
Preference number: 5 (lower is better)
Translates to: LRPFRPKHQTCCLSASLQTFIMF*LSRPDL
Trigger: AAGATCCGGCCTGGAGAGCAAGAACATTATGAAAGT...CTGCAAGGATGCAGAAAGACAGCACGTCTGATGCTTGGGTCTGAAAGGTCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGCCCAGGGCAAGAAACTaGCTTTTGGGGATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: KKQDQTPKHYSHICHYERPRARN*LLGMVS
Trigger: AGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGGG...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: SSFQPRIRILLIFQADVCLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GTCAGCCTCCTTGGGAATATAGGGCTTGATTGTGGGTGGGTGGCAGAGATCTCAACAATAGGGACATCTTaGGTTGGGATTTCACTTTTC +
Preference number: 5 (lower is better)
Translates to: VSLLGNIGLDCGWVAEISTIGTS*VGISLF
Trigger: GAAAAGTGAAATCCCAACCAAAGATGTCCCTATTGT...TGAGATCTCTGCCACCCACCCACAATCAAGCCCTATATTCCCAAGGAGGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGGGTCTAAGTCCCCATaGCTGTCCTCAGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYGSKSP*LSSVWA
Trigger: TGCCCAGACTGAGGACAGCAATGGGGACTTAGACCC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGTCTGGATGCTGCTCCTaGGCTTCCTTGATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: KKQDQTPKHYSHICHYERSGCCS*ASLMAC
Trigger: ACAAGCCATCAAGGAAGCCAAGGAGCAGCATCCAGA...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp GTGCTGGGGATCAAATCAGGGCCTCATGAATATCAAACACACTCAGTAGCTGAACACTTTTTGAGAGCCTaGTGTTCCTCGGGGATTGGA +
Preference number: 5 (lower is better)
Translates to: VLGIKSGPHEYQTHSVAEHFLRA*CSSGIG
Trigger: TCCAATCCCCGAGGAACACAAGGCTCTCAAAAAGTG...TTCAGCTACTGAGTGTGTTTGATATTCATGAGGCCCTGATTTGATCCCCAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS GCA 90 bp GCTGGAGCAGACGCCGAGAATAATGTCCACTCCCTCCAAGTCCTTTaGTTTGTGAAGATCAACTCCATACATGGACAACTTTTTGGCATT +
Preference number: 5 (lower is better)
Translates to: AGADAENNVHSLQVL*FVKINSIHGQLFGI
Trigger: AATGCCAAAAAGTTGTCCATGTATGGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGAGTGGACATTATTCTCGGCGTCTGCTCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAACTTGTTGGCCTGAGTTaGTGGCTCCCTCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKLVGLS*WLPLLL
Trigger: AAGAAGGAGAGGGAGCCACAAACTCAGGCCAACAAG...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGTTGGAGTGTCCCCATaGGATGCTTTCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKVGVSP*DAFSFC
Trigger: GCAGAAGCTGAAAGCATCCAATGGGGACACTCCAAC...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp ACAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATGTCCGTTCCTTGTTCTaGGTCAAGTCTTCATGTGTT +
Preference number: 5 (lower is better)
Translates to: TRKANTAPQDLSDYTAWNVRSLF*VKSSCV
Trigger: AACACATGAAGACTTGACCAAGAACAAGGAACGGAC...ATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATGCGACTTGGGCCTTTaGAGGAATGAGGAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKCDLGL*RNEESS
Trigger: ACTGCTCTCCTCATTCCTCAAAAGGCCCAAGTCGCA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAACGAGTAGGGCTAAAGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKRVGLK*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACTTTAGCCCTACTCG...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTCTCCAGGCCGGATCTaGATGAAGAAGCTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYSPGRI*MKKLLR
Trigger: ACGCAGCAGCTTCTTCATCAAGATCCGGCCTGGAGA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp ACAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATACTTTCATAATGTTCTaGCTCTCCAGGCCGGATCTT +
Preference number: 5 (lower is better)
Translates to: TRKANTAPQDLSDYTAWNTFIMF*LSRPDL
Trigger: AAGATCCGGCCTGGAGAGCAAGAACATTATGAAAGT...ATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp GTGCTGGGGATCAAATCAGGGCCTCATGAATATCAAACACACTCAGTAGCTGAAGCAAGAAACTTGCTTTaGGGGATGGTGTCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: VLGIKSGPHEYQTHSVAEARNLL*GMVSVE
Trigger: CTCTACAGACACCATCCCCAAAAGCAAGTTTCTTGC...TTCAGCTACTGAGTGTGTTTGATATTCATGAGGCCCTGATTTGATCCCCAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGCCACTGTATCGGAATTaGGATCCCAGGGCAAGAAAC +
Preference number: 5 (lower is better)
Translates to: KKQDQTPKHYSHICHYERPLYRN*DPRARN
Trigger: GTTTCTTGCCCTGGGATCCAAATTCCGATACAGTGG...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GGCTGTCTGCACTCAGGGATTAGGCATATAGTGATCAAATGTGTCTCAGTACAACCACTGTATCGGAATTaGGATCCCAGGGCAAGAAAC +
Preference number: 5 (lower is better)
Translates to: GCLHSGIRHIVIKCVSVQPLYRN*DPRARN
Trigger: GTTTCTTGCCCTGGGATCCAAATTCCGATACAGTGG...TTGTACTGAGACACATTTGATCACTATATGCCTAATCCCTGAGTGCAGACAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp TATGCACTGATTAGACACGCTAAGAAAAGGAGCGGTTATGGATCTTTTGGATTATTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: YALIRHAKKRSGYGSFGLLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...TAATCCAAAAGATCCATAACCGCTCCTTTTCTTAGCGTGTCTAATCAGTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACAATCAGGGCACTGGCTaGCCTGGTCTGAGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYNQGTG*PGLSLS
Trigger: ACTCAAGCTCAGACCAGGCAAGCCAGTGCCCTGATT...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATGCTCCTTGGCTTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKCSLAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGCA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATCTGGATGCTGCTCCTaGGCTTCCTTGATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKSGCCS*ASLMAC
Trigger: ACAAGCCATCAAGGAAGCCAAGGAGCAGCATCCAGA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS TCA 90 bp GACATCTTTGGTTGGGATTTCACTTTTCACAGCATTGGCAGTATCTaGGATGGTGACAGTTTGAGTCTGGAAACTTCGAATGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: DIFGWDFTFHSIGSI*DGDSLSLETSNEGG
Trigger: CCCACCCTCATTCGAAGTTTCCAGACTCAAACTGTCACCATCTCAGATACTGCCAATGCTGTGAAAAGTGAAATCCCAACCAAAGATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155990.8
CDS CCA 90 bp TCCAGAGCACTCTTCAATCCCTTCTCCTTCCTTCGTTTCAGAATCTaGGTCCTCTCTGTGTTCTTCCTGAGCTGGTTTAATAATCCAGAT +
Preference number: 5 (lower is better)
Translates to: SRALFNPFSFLRFRI*VLSVFFLSWFNNPD
Trigger: ATCTGGATTATTAAACCAGCTCAGGAAGAACACAGAGAGGACCCAGATTCTGAAACGAAGGAAGGAGAAGGGATTGAAGAGTGCTCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000105970.8
ENSMUST00000105975.8
CDS-3UTR CAA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTGTTGGAGTGTCCCCATaGGATGCTTTCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: SSFQPRIRILLIFQADVCVGVSP*DAFSFC
Trigger: GCAGAAGCTGAAAGCATCCAATGGGGACACTCCAAC...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTTCTTCTTCCAAAAGGTaGAGGTGCTCGCACACTCGC +
Preference number: 5 (lower is better)
Translates to: SSFQPRIRILLIFQADVCSSSKR*RCSHTR
Trigger: GCGAGTGTGCGAGCACCTCAACCTTTTGGAAGAAGA...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGCTCCCTCCAAGTCCTTaGCTTTGTGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: KKQDQTPKHYSHICHYERLPPSP*LCEDQL
Trigger: GAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGAG...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp GGCTGTCTGCACTCAGGGATTAGGCATATAGTGATCAAATGTGTCTCAGTACAACTCCCTCCAAGTCCTTaGCTTTGTGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: GCLHSGIRHIVIKCVSVQLPPSP*LCEDQL
Trigger: GAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGAG...TTGTACTGAGACACATTTGATCACTATATGCCTAATCCCTGAGTGCAGACAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp TGGTGGGCCAATCCATCACTACTCCTTTTTCCTCACAATGTATACTCTGCAGAGGAAATCTTTAGCACTTaGGGCCAAGGAAAGCGGTTA +
Preference number: 5 (lower is better)
Translates to: WWANPSLLLFPHNVYSAEEIFST*GQGKRL
Trigger: TAACCGCTTTCCTTGGCCCAAAGTGCTAAAGATTTC...CTCTGCAGAGTATACATTGTGAGGAAAAAGGAGTAGTGATGGATTGGCCCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGGCAAGAAACTTGCTTTaGGGGATGGTGTCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: KKQDQTPKHYSHICHYERARNLL*GMVSVE
Trigger: CTCTACAGACACCATCCCCAAAAGCAAGTTTCTTGC...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYVGTCP*MLRVRK
Trigger: CTTCCGGACTCTTAACATCAACGGGCAAGTCCCTAC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: SSFQPRIRILLIFQADVCVGTCP*MLRVRK
Trigger: CTTCCGGACTCTTAACATCAACGGGCAAGTCCCTAC...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp CAGAATAGAAGGATTTGTCTCAGATTCTGGTGTCAAGGTCACAAAGAGCAGGGAATCTCCAGTAGGGACTaGCCCGTTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: QNRRICLRFWCQGHKEQGISSRD*PVDVKS
Trigger: ACTCTTAACATCAACGGGCAAGTCCCTACTGGAGAT...TCCCTGCTCTTTGTGACCTTGACACCAGAATCTGAGACAAATCCTTCTATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTGCTCCTTGGCTTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYCSLAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGCA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTTGCTCCTTGGCTTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: SSFQPRIRILLIFQADVCCSLAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGCA...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTCTGGATGCTGCTCCTaGGCTTCCTTGATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYSGCCS*ASLMAC
Trigger: ACAAGCCATCAAGGAAGCCAAGGAGCAGCATCCAGA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp ACAAGAAAGGCAAACACAGCCCCACAAGACCTCAGTGATTACACAGCCTGGAATTATGAGAGGAAAAACTaGGCTCTGAGTTCCTTTAGC +
Preference number: 5 (lower is better)
Translates to: TRKANTAPQDLSDYTAWNYERKN*ALSSFS
Trigger: GCTAAAGGAACTCAGAGCCAAGTTTTTCCTCTCATA...ATTCCAGGCTGTGTAATCACTGAGGTCTTGTGGGGCTGTGTTTGCCTTTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS-3UTR CAA 90 bp ATCAGCTCTGTTCAATATCAGGACTTGGTATCCATTTATCAGCAGCTTTACCAACGAGTAGGGCTAAAGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: ISSVQYQDLVSIYQQLYQRVGLK*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACTTTAGCCCTACTCG...TTGGTAAAGCTGCTGATAAATGGATACCAAGTCCTGATATTGAACAGAGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAACTCCCTCCAAGTCCTTaGCTTTGTGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKLPPSP*LCEDQL
Trigger: GAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGAG...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGCAAGAAACTTGCTTTaGGGGATGGTGTCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKARNLL*GMVSVE
Trigger: CTCTACAGACACCATCCCCAAAAGCAAGTTTCTTGC...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp TATGCACTGATTAGACACGCTAAGAAAAGGAGCGGTTATGGATCTTTTGGATTACCCAGGGCAAGAAACTaGCTTTTGGGGATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: YALIRHAKKRSGYGSFGLPRARN*LLGMVS
Trigger: AGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGGG...TAATCCAAAAGATCCATAACCGCTCCTTTTCTTAGCGTGTCTAATCAGTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTTCAAGTCTTCATGTGTaGGAGTGTCCCCATTGGATG +
Preference number: 5 (lower is better)
Translates to: SSFQPRIRILLIFQADVCSSLHV*ECPHWM
Trigger: CATCCAATGGGGACACTCCAACACATGAAGACTTGA...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCATCTCCAGGCCGGATCTaGATGAAGAAGCTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSSPGRI*MKKLLR
Trigger: ACGCAGCAGCTTCTTCATCAAGATCCGGCCTGGAGA...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAACTTTCATAATGTTCTaGCTCTCCAGGCCGGATCTT +
Preference number: 5 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKTFIMF*LSRPDL
Trigger: AAGATCCGGCCTGGAGAGCAAGAACATTATGAAAGT...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGCAAGAAACTTGCTTTaGGGGATGGTGTCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYARNLL*GMVSVE
Trigger: CTCTACAGACACCATCCCCAAAAGCAAGTTTCTTGC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTGCAAGAAACTTGCTTTaGGGGATGGTGTCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: SSFQPRIRILLIFQADVCARNLL*GMVSVE
Trigger: CTCTACAGACACCATCCCCAAAAGCAAGTTTCTTGC...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACATCTCCAGTAGGGACTaGCCCGTTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYISSRD*PVDVKS
Trigger: ACTCTTAACATCAACGGGCAAGTCCCTACTGGAGAT...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTATCTCCAGTAGGGACTaGCCCGTTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: SSFQPRIRILLIFQADVCISSRD*PVDVKS
Trigger: ACTCTTAACATCAACGGGCAAGTCCCTACTGGAGAT...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAATCACTTTTCACAGCATaGGCAGTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKSLFTA*AVSEMV
Trigger: CACCATCTCAGATACTGCCAATGCTGTGAAAAGTGA...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp ACAAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAACCACCTTTTACAGTCTaGGTAATCTGTGTCGTGGTT +
Preference number: 5 (lower is better)
Translates to: TRSKTKHLNTTATSVTTKPPFTV*VICVVV
Trigger: AACCACGACACAGATTACCAAGACTGTAAAAGGTGG...TTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGTCCGTTCCTTGTTCTaGGTCAAGTCTTCATGTGTT +
Preference number: 5 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYVRSLF*VKSSCV
Trigger: AACACATGAAGACTTGACCAAGAACAAGGAACGGAC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACTCTGATGTCCGTTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAACGGACATCAGA...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
CDS-3UTR CAA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACGAAATCTTTAGCACTTaGGGCCAAGGAAAGCGGTTA +
Preference number: 5 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYEIFST*GQGKRL
Trigger: TAACCGCTTTCCTTGGCCCAAAGTGCTAAAGATTTC...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTACTTTCATAATGTTCTaGCTCTCCAGGCCGGATCTT +
Preference number: 5 (lower is better)
Translates to: SSFQPRIRILLIFQADVCTFIMF*LSRPDL
Trigger: AAGATCCGGCCTGGAGAGCAAGAACATTATGAAAGT...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTTCACTTTTCACAGCATaGGCAGTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: SSFQPRIRILLIFQADVCSLFTA*AVSEMV
Trigger: CACCATCTCAGATACTGCCAATGCTGTGAAAAGTGA...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp AAGAAGCAAGACCAAACACCTAAACACTACAGCCACATCTGTCACTACGAAAGGACAATAGGGACATCTTaGGTTGGGATTTCACTTTTC +
Preference number: 5 (lower is better)
Translates to: KKQDQTPKHYSHICHYERTIGTS*VGISLF
Trigger: GAAAAGTGAAATCCCAACCAAAGATGTCCCTATTGT...CCTTTCGTAGTGACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp TTTCGGTTGGACTCTGCCGGCATAGTTCCTATTTTGTCAAATGTAAACAACTACCCACCTTTTACAGTCTaGGTAATCTGTGTCGTGGTT +
Preference number: 5 (lower is better)
Translates to: FRLDSAGIVPILSNVNNYPPFTV*VICVVV
Trigger: AACCACGACACAGATTACCAAGACTGTAAAAGGTGG...GTAGTTGTTTACATTTGACAAAATAGGAACTATGCCGGCAGAGTCCAACCGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCATCTGGATGCTGCTCCTaGGCTTCCTTGATGGCTTGT +
Preference number: 5 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSSGCCS*ASLMAC
Trigger: ACAAGCCATCAAGGAAGCCAAGGAGCAGCATCCAGA...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS TCA 90 bp TTATTTTGTATGCACTCAGGCTGTGTCTCTATACTGCTTAATGAATaGAGATCCAAAGATGGGTCTGTTTTGAGCTCAGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: LFCMHSGCVSILLNE*RSKDGSVLSSGSGA
Trigger: AGCTCCTGAACCTGAGCTCAAAACAGACCCATCTTTGGATCTTCATTCATTAAGCAGTATAGAGACACAGCCTGAGTGCATACAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105975.8
CDS-3UTR CAA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCATCGCTTCAGCAAGTCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSSLQQV*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGACTTGCTGAAGCGA...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCAGCAAGAAACTTGCTTTaGGGGATGGTGTCTGTAGAG +
Preference number: 5 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSARNLL*GMVSVE
Trigger: CTCTACAGACACCATCCCCAAAAGCAAGTTTCTTGC...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
CDS-3UTR CAA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCAATCTCCAGTAGGGACTaGCCCGTTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSISSRD*PVDVKS
Trigger: ACTCTTAACATCAACGGGCAAGTCCCTACTGGAGAT...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS-3UTR CAA 90 bp AGCTCATTCCAGCCTAGAATTAGGATTCTACTAATCTTCCAGGCAGATGTTTGTACAATAGGGACATCTTaGGTTGGGATTTCACTTTTC +
Preference number: 5 (lower is better)
Translates to: SSFQPRIRILLIFQADVCTIGTS*VGISLF
Trigger: GAAAAGTGAAATCCCAACCAAAGATGTCCCTATTGT...ACAAACATCTGCCTGGAAGATTAGTAGAATCCTAATTCTAGGCTGGAATGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS CCA 90 bp TTTATGCAATTCCATGACCTTTTCTTCAAGTTCCTTGGTCTGATTTaGAGCCAGTTTAAAATCACTAACATAATCCATGCCGTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: FMQFHDLFFKFLGLI*SQFKITNIIHAVQF
Trigger: GAACTGCACGGCATGGATTATGTTAGTGATTTTAAACTGGCTCCAAATCAGACCAAGGAACTTGAAGAAAAGGTCATGGAATTGCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
ENSMUST00000212761.2
CDS-3UTR CAA 90 bp TCAAAGTGTCTTAAAAACAGTTCACAGAGCGAAAAGTTGACAGTTTCTGTATCATCACTTTTCACAGCATaGGCAGTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: SKCLKNSSQSEKLTVSVSSLFTA*AVSEMV
Trigger: CACCATCTCAGATACTGCCAATGCTGTGAAAAGTGA...TGATACAGAAACTGTCAACTTTTCGCTCTGTGAACTGTTTTTAAGACACTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS-3UTR CAA 90 bp TATGCACTGATTAGACACGCTAAGAAAAGGAGCGGTTATGGATCTTTTGGATTAATTGGAATAGAAACCTaGGGAGCAATCTCTTCATTT +
Preference number: 5 (lower is better)
Translates to: YALIRHAKKRSGYGSFGLIGIET*GAISSF
Trigger: AAATGAAGAGATTGCTCCCAAGGTTTCTATTCCAAT...TAATCCAAAAGATCCATAACCGCTCCTTTTCTTAGCGTGTCTAATCAGTGCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS CCA 72 bp TGGCTGGGGCAGAGGTGGGCCGAGGACTTCGGTCTGTaGACTCAGCAGCTGCTGCTCCATCGAGGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: WLGQRWAEDFGL*TQQLLLHRGSW
Trigger: CCAGGAGCCTCGATGGAGCAGCAGCTGCTGAGTCCACAGACCGAAGTCCTCGGCCCACCTCTGCCCCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
CDS CAA 72 bp CTGCTCACCCTGATCGCTGCCCTCAGCTGCGGCCGCTaGGGAGGCCTCCTCCAGCTGAGTTTCTTGTTGGCC +
Preference number: 6 (lower is better)
Translates to: LLTLIAALSCGR*GGLLQLSFLLA
Trigger: GGCCAACAAGAAACTCAGCTGGAGGAGGCCTCCCAAGCGGCCGCAGCTGAGGGCAGCGATCAGGGTGAGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS TCA 72 bp CCCTCAGCTGCGGCCGCTTGGGAGGCCTCCTCCAGCTaGGTTTCTTGTTGGCCTGAGTTTGTGGCTCCCTCT +
Preference number: 6 (lower is better)
Translates to: PSAAAAWEASSS*VSCWPEFVAPS
Trigger: AGAGGGAGCCACAAACTCAGGCCAACAAGAAACTCAGCTGGAGGAGGCCTCCCAAGCGGCCGCAGCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS GCA 72 bp CATTGGATGCTTTCAGCTTCTGCTCACCCTGATCGCTaGCCTCAGCTGCGGCCGCTTGGGAGGCCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: HWMLSASAHPDR*PQLRPLGRPPP
Trigger: TGGAGGAGGCCTCCCAAGCGGCCGCAGCTGAGGGCAGCGATCAGGGTGAGCAGAAGCTGAAAGCATCCAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS GCA 72 bp GGTCTCTGCTGCTGCACCCAGCTCTTCGCTACTGTCTaGCTTTTCCCCACCGAGTTGCAGCTGGCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: GLCCCTQLFATV*LFPTELQLAGS
Trigger: GCTTCCTGCCAGCTGCAACTCGGTGGGGAAAAGGCAGACAGTAGCGAAGAGCTGGGTGCAGCAGCAGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS CCA 72 bp CTTCACCTTTTCCTGCAAGCTTCTTCCATGCTTCTGTaGGCTCCGGCTCAGCGGGCTCAGCCGGCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: LHLFLQASSMLL*APAQRAQPALL
Trigger: GAGAAGAGCCGGCTGAGCCCGCTGAGCCGGAGCCCACAGAAGCATGGAAGAAGCTTGCAGGAAAAGGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146443.8
CDS CAA 90 bp CACTGGCCTGTTCCTCCACTCCTAAGCATTCCCCACTTGGGCCTGTaGGCATCTCTTCAGCATCAAGATAGCCAGCTGCCCCCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: HWPVPPLLSIPHLGL*ASLQHQDSQLPPAP
Trigger: AGGAGCAGGGGGCAGCTGGCTATCTTGATGCTGAAGAGATGCCAACAGGCCCAAGTGGGGAATGCTTAGGAGTGGAGGAACAGGCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS TCA 72 bp CTCTGTGGAGACGCCGGCGGAGTGGTCATCAGGCTCTaGCTAGGAACTACTGACTGTTTGGGGCACTCCCAT +
Preference number: 6 (lower is better)
Translates to: LCGDAGGVVIRL*LGTTDCLGHSH
Trigger: ATGGGAGTGCCCCAAACAGTCAGTAGTTCCTAGTCAGAGCCTGATGACCACTCCGCCGGCGTCTCCACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS GCA 72 bp AAAGGATCCGCTCTGGGTCTCAAGGGTCTCTGCTGCTaGACCCAGCTCTTCGCTACTGTCTGCCTTTTCCCC +
Preference number: 6 (lower is better)
Translates to: KGSALGLKGLCC*TQLFATVCLFP
Trigger: GGGGAAAAGGCAGACAGTAGCGAAGAGCTGGGTGCAGCAGCAGAGACCCTTGAGACCCAGAGCGGATCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS CCA 72 bp GCTGTTTATGGAGAGGGAGCCAGAACCAAAGCTCTGTaGAGACGCCGGCGGAGTGGTCATCAGGCTCTGACT +
Preference number: 6 (lower is better)
Translates to: AVYGEGARTKAL*RRRRSGHQALT
Trigger: AGTCAGAGCCTGATGACCACTCCGCCGGCGTCTCCACAGAGCTTTGGTTCTGGCTCCCTCTCCATAAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS CCA 72 bp CCCACCGAGTTGCAGCTGGCAGGAAGCTGGAGTTACTaGGAAACTGAATGCACTGGCCTGTTCCTCCACTCC +
Preference number: 6 (lower is better)
Translates to: PTELQLAGSWSY*ETECTGLFLHS
Trigger: GGAGTGGAGGAACAGGCCAGTGCATTCAGTTTCCCAGTAACTCCAGCTTCCTGCCAGCTGCAACTCGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS CAA 72 bp CGGGCTTCTGGGAGGCTTCGGGTTCTCTCTCTGCTCTaGACTCTGGGTCCTCTTTCACCTCTGTTCCAGAGC +
Preference number: 6 (lower is better)
Translates to: RASGRLRVLSLL*TLGPLSPLFQS
Trigger: GCTCTGGAACAGAGGTGAAAGAGGACCCAGAGTCAAGAGCAGAGAGAGAACCCGAAGCCTCCCAGAAGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
CDS CAA 90 bp TGGAGCAGGCCTGTCAATCAGGGCACTGGCTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCGGAATTTGGATCCCAGGGCAAGAAA +
Preference number: 6 (lower is better)
Translates to: WSRPVNQGTGLPGLS*SPATVSEFGSQGKK
Trigger: TTTCTTGCCCTGGGATCCAAATTCCGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAAGCCAGTGCCCTGATTGACAGGCCTGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
ENSMUST00000212761.2
CDS CCA 72 bp CTTCTTGACTCTTGTCTAAATCCTTCCATGCTTCTGTaGGCTCCGGCTCAGCGGGCTCAGCCGGCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: LLDSCLNPSMLL*APAQRAQPALL
Trigger: GAGAAGAGCCGGCTGAGCCCGCTGAGCCGGAGCCCACAGAAGCATGGAAGGATTTAGACAAGAGTCAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105974.8
ENSMUST00000135579.8
ENSMUST00000146021.8
ENSMUST00000212761.2
CDS CAA 72 bp CCTGTCAATCAGGGCACTGGCTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCGGAATTTGGATCCCAG +
Preference number: 6 (lower is better)
Translates to: PVNQGTGLPGLS*SPATVSEFGSQ
Trigger: CTGGGATCCAAATTCCGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAAGCCAGTGCCCTGATTGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
ENSMUST00000212761.2
CDS CAA 90 bp CCGCTTGGGAGGCCTCCTCCAGCTGAGTTTCTTGTTGGCCTGAGTTaGTGGCTCCCTCTCCTTCTTCCTTCTGTTGCTGGTGCTGAGAAT +
Preference number: 6 (lower is better)
Translates to: PLGRPPPAEFLVGLS*WLPLLLPSVAGAEN
Trigger: ATTCTCAGCACCAGCAACAGAAGGAAGAAGGAGAGGGAGCCACAAACTCAGGCCAACAAGAAACTCAGCTGGAGGAGGCCTCCCAAGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS CAA 90 bp TGCTGCACCCAGCTCTTCGCTACTGTCTGCCTTTTCCCCACCGAGTaGCAGCTGGCAGGAAGCTGGAGTTACTGGGAAACTGAATGCACT +
Preference number: 6 (lower is better)
Translates to: CCTQLFATVCLFPTE*QLAGSWSYWETECT
Trigger: AGTGCATTCAGTTTCCCAGTAACTCCAGCTTCCTGCCAGCTGCAACTCGGTGGGGAAAAGGCAGACAGTAGCGAAGAGCTGGGTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS TCA 72 bp TGCCTTCTTCTTCAGAGACCTGCGACTTGGGCCTTTTaGGGAATGAGGAGAGCAGTCGTGACAGGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: CLLLQRPATWAF*GMRRAVVTGLC
Trigger: GCAGAGGCCTGTCACGACTGCTCTCCTCATTCCTCAAAAGGCCCAAGTCGCAGGTCTCTGAAGAAGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS CCA 72 bp TGCCTTTTCCCCACCGAGTTGCAGCTGGCAGGAAGCTaGAGTTACTGGGAAACTGAATGCACTGGCCTGTTC +
Preference number: 6 (lower is better)
Translates to: CLFPTELQLAGS*SYWETECTGLF
Trigger: GAACAGGCCAGTGCATTCAGTTTCCCAGTAACTCCAGCTTCCTGCCAGCTGCAACTCGGTGGGGAAAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS CAA 72 bp CTGCCTTCTTCTTCAGAGACCTGCGACTTGGGCCTTTaGAGGAATGAGGAGAGCAGTCGTGACAGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: LPSSSETCDLGL*RNEESSRDRPL
Trigger: CAGAGGCCTGTCACGACTGCTCTCCTCATTCCTCAAAAGGCCCAAGTCGCAGGTCTCTGAAGAAGAAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS CAA 72 bp GTTCCTCCACTCCTAAGCATTCCCCACTTGGGCCTGTaGGCATCTCTTCAGCATCAAGATAGCCAGCTGCCC +
Preference number: 6 (lower is better)
Translates to: VPPLLSIPHLGL*ASLQHQDSQLP
Trigger: GGGCAGCTGGCTATCTTGATGCTGAAGAGATGCCAACAGGCCCAAGTGGGGAATGCTTAGGAGTGGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS CCA 72 bp GTGGTTGTACTACTTGTGGTCTCGGATGTGATGGTCTaGGCTGTCAGCAAGACTCCAGGGTCTAAGTCCCCA +
Preference number: 6 (lower is better)
Translates to: VVVLLVVSDVMV*AVSKTPGSKSP
Trigger: TGGGGACTTAGACCCTGGAGTCTTGCTGACAGCCCAGACCATCACATCCGAGACCACAAGTAGTACAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS CCA 72 bp TCGCTACTGTCTGCCTTTTCCCCACCGAGTTGCAGCTaGCAGGAAGCTGGAGTTACTGGGAAACTGAATGCA +
Preference number: 6 (lower is better)
Translates to: SLLSAFSPPSCS*QEAGVTGKLNA
Trigger: TGCATTCAGTTTCCCAGTAACTCCAGCTTCCTGCCAGCTGCAACTCGGTGGGGAAAAGGCAGACAGTAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000135579.8
ENSMUST00000155990.8
CDS CCA 72 bp AGAGGAGGCTGGAAACTTCGAATGAGGGTGGGGAACTaGTTACCCACAGGTGAGTCAAGAAAGGATCCGCTC +
Preference number: 6 (lower is better)
Translates to: RGGWKLRMRVGN*LPTGESRKDPL
Trigger: GAGCGGATCCTTTCTTGACTCACCTGTGGGTAACCAGTTCCCCACCCTCATTCGAAGTTTCCAGCCTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS CAA 72 bp CACTGGCCTGTTCCTCCACTCCTAAGCATTCCCCACTaGGGCCTGTTGGCATCTCTTCAGCATCAAGATAGC +
Preference number: 6 (lower is better)
Translates to: HWPVPPLLSIPH*GLLASLQHQDS
Trigger: GCTATCTTGATGCTGAAGAGATGCCAACAGGCCCAAGTGGGGAATGCTTAGGAGTGGAGGAACAGGCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS TCA 72 bp TCTGTGTCGTGGTTGTACTACTTGTGGTCTCGGATGTaGTGGTCTGGGCTGTCAGCAAGACTCCAGGGTCTA +
Preference number: 6 (lower is better)
Translates to: SVSWLYYLWSRM*WSGLSARLQGL
Trigger: TAGACCCTGGAGTCTTGCTGACAGCCCAGACCATCACATCCGAGACCACAAGTAGTACAACCACGACACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000135579.8
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
ENSMUST00000155990.8
CDS GCA 72 bp GTCTTTACCAGAGGAGGTCCATCTCCAGTAGGGACTTaGCCGTTGATGTTAAGAGTCCGGAAGGGTGAGTGT +
Preference number: 6 (lower is better)
Translates to: VFTRGGPSPVGT*PLMLRVRKGEC
Trigger: ACACTCACCCTTCCGGACTCTTAACATCAACGGGCAAGTCCCTACTGGAGATGGACCTCCTCTGGTAAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS CCA 72 bp TGGTCTGAGCTTGAGTCCGGCCACTGTATCGGAATTTaGATCCCAGGGCAAGAAACTTGCTTTTGGGGATGG +
Preference number: 6 (lower is better)
Translates to: WSELESGHCIGI*IPGQETCFWGW
Trigger: CCATCCCCAAAAGCAAGTTTCTTGCCCTGGGATCCAAATTCCGATACAGTGGCCGGACTCAAGCTCAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
ENSMUST00000212761.2
CDS CAA 72 bp ACCAGAGGAGGTCCATCTCCAGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAGGGTGAGTGTGTAGAT +
Preference number: 6 (lower is better)
Translates to: TRGGPSPVGTCP*MLRVRKGECVD
Trigger: ATCTACACACTCACCCTTCCGGACTCTTAACATCAACGGGCAAGTCCCTACTGGAGATGGACCTCCTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000146021.8
ENSMUST00000146443.8
CDS CAA 90 bp GAGGAGAGCAGTCGTGACAGGCCTCTGCTTTCTGATGTCCGTTCCTaGTTCTTGGTCAAGTCTTCATGTGTTGGAGTGTCCCCATTGGAT +
Preference number: 6 (lower is better)
Translates to: EESSRDRPLLSDVRS*FLVKSSCVGVSPLD
Trigger: ATCCAATGGGGACACTCCAACACATGAAGACTTGACCAAGAACAAGGAACGGACATCAGAAAGCAGAGGCCTGTCACGACTGCTCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS CAA 90 bp TCTACTTCTCTGCCTTCTTCTTCAGAGACCTGCGACTTGGGCCTTTaGAGGAATGAGGAGAGCAGTCGTGACAGGCCTCTGCTTTCTGAT +
Preference number: 6 (lower is better)
Translates to: STSLPSSSETCDLGL*RNEESSRDRPLLSD
Trigger: ATCAGAAAGCAGAGGCCTGTCACGACTGCTCTCCTCATTCCTCAAAAGGCCCAAGTCGCAGGTCTCTGAAGAAGAAGGCAGAGAAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS TCA 72 bp GGGATGGTGTCTGTAGAGGTGAGTCTGAAGAACGTGTaGTGCTCCACACAGACCTTCCATAGTTTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: GMVSVEVSLKNV*CSTQTFHSFLA
Trigger: GGCCAAGAAACTATGGAAGGTCTGTGTGGAGCATCACACGTTCTTCAGACTCACCTCTACAGACACCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
ENSMUST00000212761.2
CDS CAA 72 bp TCTACTTCTCTGCCTTCTTCTTCAGAGACCTGCGACTaGGGCCTTTTGAGGAATGAGGAGAGCAGTCGTGAC +
Preference number: 6 (lower is better)
Translates to: STSLPSSSETCD*GLLRNEESSRD
Trigger: GTCACGACTGCTCTCCTCATTCCTCAAAAGGCCCAAGTCGCAGGTCTCTGAAGAAGAAGGCAGAGAAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS CAA 72 bp CAGACTGGATCGTGTAAGACCCGAGTAGGGCTAAAGTaGCAAAGGAACAGGGCAGACGTCCAGCAACAATGT +
Preference number: 6 (lower is better)
Translates to: QTGSCKTRVGLK*QRNRADVQQQC
Trigger: ACATTGTTGCTGGACGTCTGCCCTGTTCCTTTGCAACTTTAGCCCTACTCGGGTCTTACACGATCCAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
ENSMUST00000212761.2
CDS CAA 90 bp AGCAGTCGTGACAGGCCTCTGCTTTCTGATGTCCGTTCCTTGTTCTaGGTCAAGTCTTCATGTGTTGGAGTGTCCCCATTGGATGCTTTC +
Preference number: 6 (lower is better)
Translates to: SSRDRPLLSDVRSLF*VKSSCVGVSPLDAF
Trigger: GAAAGCATCCAATGGGGACACTCCAACACATGAAGACTTGACCAAGAACAAGGAACGGACATCAGAAAGCAGAGGCCTGTCACGACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS TCA 72 bp TTTGAGTCTTTACCAGAGGAGGCTGGAAACTTCGAATaGGGGTGGGGAACTGGTTACCCACAGGTGAGTCAA +
Preference number: 6 (lower is better)
Translates to: FESLPEEAGNFE*GWGTGYPQVSQ
Trigger: TTGACTCACCTGTGGGTAACCAGTTCCCCACCCTCATTCGAAGTTTCCAGCCTCCTCTGGTAAAGACTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS TCA 72 bp TTAGCTGAGCTAGCCTTCTCTGGTCGGTCTGGAAGCTaGATACCGGTTCTTTGCACACCCCTAAGTGATATG +
Preference number: 6 (lower is better)
Translates to: LAELAFSGRSGS*IPVLCTPLSDM
Trigger: CATATCACTTAGGGGTGTGCAAAGAACCGGTATTCAGCTTCCAGACCGACCAGAGAAGGCTAGCTCAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS GCA 72 bp CGAATGCCATTTACACTTCCATCTCCAGTAGGGACTTaGCCGTTGATGTTAAGAGTCCGGAAGGGTGAGTGT +
Preference number: 6 (lower is better)
Translates to: RMPFTLPSPVGT*PLMLRVRKGEC
Trigger: ACACTCACCCTTCCGGACTCTTAACATCAACGGGCAAGTCCCTACTGGAGATGGAAGTGTAAATGGCATTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS CCA 72 bp ATAGAAACCTTGGGAGCAATCTCTTCATTTTCGCGCTaGGGCAAGGTTCTCTCAGTGGATCTCTCTGGCCTT +
Preference number: 6 (lower is better)
Translates to: IETLGAISSFSR*GKVLSVDLSGL
Trigger: AAGGCCAGAGAGATCCACTGAGAGAACCTTGCCCCAGCGCGAAAATGAAGAGATTGCTCCCAAGGTTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212761.2
CDS CAA 72 bp GACAGGCCTCTGCTTTCTGATGTCCGTTCCTTGTTCTaGGTCAAGTCTTCATGTGTTGGAGTGTCCCCATTG +
Preference number: 6 (lower is better)
Translates to: DRPLLSDVRSLF*VKSSCVGVSPL
Trigger: CAATGGGGACACTCCAACACATGAAGACTTGACCAAGAACAAGGAACGGACATCAGAAAGCAGAGGCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS CAA 72 bp AGTCGTGACAGGCCTCTGCTTTCTGATGTCCGTTCCTaGTTCTTGGTCAAGTCTTCATGTGTTGGAGTGTCC +
Preference number: 6 (lower is better)
Translates to: SRDRPLLSDVRS*FLVKSSCVGVS
Trigger: GGACACTCCAACACATGAAGACTTGACCAAGAACAAGGAACGGACATCAGAAAGCAGAGGCCTGTCACGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS CAA 72 bp CCACTGTATCGGAATTTGGATCCCAGGGCAAGAAACTaGCTTTTGGGGATGGTGTCTGTAGAGGTGAGTCTG +
Preference number: 6 (lower is better)
Translates to: PLYRNLDPRARN*LLGMVSVEVSL
Trigger: CAGACTCACCTCTACAGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGGGATCCAAATTCCGATACAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
ENSMUST00000212761.2
CDS CAA 90 bp GTTCGAATGCCATTTACACTTCCATCTCCAGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAGGGTGAGTGTGTAGATAAGCGCTTG +
Preference number: 6 (lower is better)
Translates to: VRMPFTLPSPVGTCP*MLRVRKGECVDKRL
Trigger: CAAGCGCTTATCTACACACTCACCCTTCCGGACTCTTAACATCAACGGGCAAGTCCCTACTGGAGATGGAAGTGTAAATGGCATTCGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS CCA 72 bp TGTCCGTTCCTTGTTCTTGGTCAAGTCTTCATGTGTTaGAGTGTCCCCATTGGATGCTTTCAGCTTCTGCTC +
Preference number: 6 (lower is better)
Translates to: CPFLVLGQVFMC*SVPIGCFQLLL
Trigger: GAGCAGAAGCTGAAAGCATCCAATGGGGACACTCCAACACATGAAGACTTGACCAAGAACAAGGAACGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS CAA 72 bp CCATTTACACTTCCATCTCCAGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAGGGTGAGTGTGTAGAT +
Preference number: 6 (lower is better)
Translates to: PFTLPSPVGTCP*MLRVRKGECVD
Trigger: ATCTACACACTCACCCTTCCGGACTCTTAACATCAACGGGCAAGTCCCTACTGGAGATGGAAGTGTAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000135579.8
CDS CAA 72 bp GTTTTCTTCACTCCATCTCCAGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAGGGTGAGTGTGTAGAT +
Preference number: 6 (lower is better)
Translates to: VFFTPSPVGTCP*MLRVRKGECVD
Trigger: ATCTACACACTCACCCTTCCGGACTCTTAACATCAACGGGCAAGTCCCTACTGGAGATGGAGTGAAGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141291.3
ENSMUST00000212761.2
CDS CAA 90 bp TGCTTTCTGATGTCCGTTCCTTGTTCTTGGTCAAGTCTTCATGTGTaGGAGTGTCCCCATTGGATGCTTTCAGCTTCTGCTCACCCTGAT +
Preference number: 6 (lower is better)
Translates to: CFLMSVPCSWSSLHV*ECPHWMLSASAHPD
Trigger: ATCAGGGTGAGCAGAAGCTGAAAGCATCCAATGGGGACACTCCAACACATGAAGACTTGACCAAGAACAAGGAACGGACATCAGAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS CAA 90 bp TTCTTCCAAAAGGTTGAGGTGCTCGCACACTCGCTTCAGCAAGTCTaGTCCCTTAGCATGTTTCTCTACAACACATTCGTAGACCGTGTC +
Preference number: 6 (lower is better)
Translates to: FFQKVEVLAHSLQQV*SLSMFLYNTFVDRV
Trigger: GACACGGTCTACGAATGTGTTGTAGAGAAACATGCTAAGGGACAAGACTTGCTGAAGCGAGTGTGCGAGCACCTCAACCTTTTGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
CDS CAA 90 bp AGGATAGAAGTTTTCTTCACTCCATCTCCAGTAGGGACTTGCCCGTaGATGTTAAGAGTCCGGAAGGGTGAGTGTGTAGATAAGCGCTTG +
Preference number: 6 (lower is better)
Translates to: RIEVFFTPSPVGTCP*MLRVRKGECVDKRL
Trigger: CAAGCGCTTATCTACACACTCACCCTTCCGGACTCTTAACATCAACGGGCAAGTCCCTACTGGAGATGGAGTGAAGAAAACTTCTATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141291.3
ENSMUST00000212761.2
CDS TCA 72 bp TCCATAGTTTCTTGGCCGCTCGATAACTGGGGAGCTTaGAGCCGATGGTACTTTCATAATGTTCTTGCTCTC +
Preference number: 6 (lower is better)
Translates to: SIVSWPLDNWGA*SRWYFHNVLAL
Trigger: GAGAGCAAGAACATTATGAAAGTACCATCGGCTTCAAGCTCCCCAGTTATCGAGCGGCCAAGAAACTATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
ENSMUST00000212761.2
CDS TCA 72 bp TATGAGAGGAAAAACTTGGCTCTGAGTTCCTTTAGCTaGGCTAGCCTTCTCTGGTCGGTCTGGAAGCTGAAT +
Preference number: 6 (lower is better)
Translates to: YERKNLALSSFS*ASLLWSVWKLN
Trigger: ATTCAGCTTCCAGACCGACCAGAGAAGGCTAGCTCAGCTAAAGGAACTCAGAGCCAAGTTTTTCCTCTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141291.3
CDS GCA 72 bp ATAGAAGTTTTCTTCACTCCATCTCCAGTAGGGACTTaGCCGTTGATGTTAAGAGTCCGGAAGGGTGAGTGT +
Preference number: 6 (lower is better)
Translates to: IEVFFTPSPVGT*PLMLRVRKGEC
Trigger: ACACTCACCCTTCCGGACTCTTAACATCAACGGGCAAGTCCCTACTGGAGATGGAGTGAAGAAAACTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141291.3
ENSMUST00000212761.2
CDS CAA 72 bp ATGTCCGTTCCTTGTTCTTGGTCAAGTCTTCATGTGTaGGAGTGTCCCCATTGGATGCTTTCAGCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: MSVPCSWSSLHV*ECPHWMLSASA
Trigger: AGCAGAAGCTGAAAGCATCCAATGGGGACACTCCAACACATGAAGACTTGACCAAGAACAAGGAACGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000141291.3
CDS CAA 72 bp AAGGTTGAGGTGCTCGCACACTCGCTTCAGCAAGTCTaGTCCCTTAGCATGTTTCTCTACAACACATTCGTA +
Preference number: 6 (lower is better)
Translates to: KVEVLAHSLQQV*SLSMFLYNTFV
Trigger: TACGAATGTGTTGTAGAGAAACATGCTAAGGGACAAGACTTGCTGAAGCGAGTGTGCGAGCACCTCAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
CDS CAA 72 bp TATCGGAATTTGGATCCCAGGGCAAGAAACTTGCTTTaGGGGATGGTGTCTGTAGAGGTGAGTCTGAAGAAC +
Preference number: 6 (lower is better)
Translates to: YRNLDPRARNLL*GMVSVEVSLKN
Trigger: GTTCTTCAGACTCACCTCTACAGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGGGATCCAAATTCCGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
ENSMUST00000212761.2
CDS GCA 72 bp GACGCCGAGAATAATGTCCACTCCCTCCAAGTCCTTTaGTTTGTGAAGATCAACTCCATACATGGACAACTT +
Preference number: 6 (lower is better)
Translates to: DAENNVHSLQVL*FVKINSIHGQL
Trigger: AAGTTGTCCATGTATGGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGAGTGGACATTATTCTCGGCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
ENSMUST00000212761.2
CDS TCA 72 bp ATGCACTCAGGCTGTGTCTCTATACTGCTTAATGAATaGAGATCCAAAGATGGGTCTGTTTTGAGCTCAGGT +
Preference number: 6 (lower is better)
Translates to: MHSGCVSILLNE*RSKDGSVLSSG
Trigger: ACCTGAGCTCAAAACAGACCCATCTTTGGATCTTCATTCATTAAGCAGTATAGAGACACAGCCTGAGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105975.8
CDS TCA 72 bp GGTTGGGATTTCACTTTTCACAGCATTGGCAGTATCTaGGATGGTGACAGTTTGAGTCTGGAAACTTCGAAT +
Preference number: 6 (lower is better)
Translates to: GWDFTFHSIGSI*DGDSLSLETSN
Trigger: ATTCGAAGTTTCCAGACTCAAACTGTCACCATCTCAGATACTGCCAATGCTGTGAAAAGTGAAATCCCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155990.8
CDS TCA 72 bp AGAATAATGTCCACTCCCTCCAAGTCCTTTGCTTTGTaGAGATCAACTCCATACATGGACAACTTTTTGGCA +
Preference number: 6 (lower is better)
Translates to: RIMSTPSKSFAL*RSTPYMDNFLA
Trigger: TGCCAAAAAGTTGTCCATGTATGGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGAGTGGACATTATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000030739.11
ENSMUST00000054917.12
ENSMUST00000084253.10
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105974.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146021.8
ENSMUST00000212761.2
CDS TCA 72 bp TCACTGATGCTGGCATGGTGCTTTTTGATCTCTTCTTaGCTCTTGTCTAAATCCTCCAACATTAAATTGCTA +
Preference number: 6 (lower is better)
Translates to: SLMLAWCFLISS*LLSKSSNIKLL
Trigger: TAGCAATTTAATGTTGGAGGATTTAGACAAGAGTCAAGAAGAGATCAAAAAGCACCATGCCAGCATCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000030739.11
ENSMUST00000105970.8
ENSMUST00000105972.8
ENSMUST00000105975.8
ENSMUST00000105981.9
ENSMUST00000137846.8
ENSMUST00000141291.3
ENSMUST00000146443.8
CDS GCA 72 bp TCTTATTTTGTATGCACTCAGGCTGTGTCTCTATACTaGTTAATGAATGAAGATCCAAAGATGGGTCTGTTT +
Preference number: 6 (lower is better)
Translates to: SYFVCTQAVSLY*LMNEDPKMGLF
Trigger: AAACAGACCCATCTTTGGATCTTCATTCATTAAGCAGTATAGAGACACAGCCTGAGTGCATACAAAATAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105975.8