Pregenerated sensors for EOMES (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032446Ensembl transcript IDs: ENSMUST00000035020.15, ENSMUST00000111763.8, ENSMUST00000150633.2
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTAAAACCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGTaGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGG | + |
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Preference number: 1 (lower is better) Translates to: LKPMLGLLQFSYLRP*QSFGAFSQRIAQNR Trigger: CCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGGTTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCAAGAATGTTCGAGGCCAATATATGCAAAAACAGGGCTAGGGCTATAGCTAAGTTGCAGGCAGCCTaGAGTCTTTTACTCTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: EARMFEANICKNRARAIAKLQAA*SLLLLS Trigger: AGACAAGAGTAAAAGACTCCAGGCTGCCTGCAACTT...AGCTATAGCCCTAGCCCTGTTTTTGCATATATTGGCCTCGAACATTCTTGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
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| 3UTR CCA 72 bp | CCCCGCTTGACTCTCAGGCTCAGCCTCTATAGGCCCTaGCAGAAGATATCTGTGAAGAGCCCACTGTTAACT | + |
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Preference number: 3 (lower is better) Translates to: PRLTLRLSLYRP*QKISVKSPLLT Trigger: AGTTAACAGTGGGCTCTTCACAGATATCTTCTGCCAGGGCCTATAGAGGCTGAGCCTGAGAGTCAAGCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
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| 3UTR CCA 72 bp | ATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGTaGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCA | + |
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Preference number: 3 (lower is better) Translates to: MLGLLQFSYLRP*QSFGAFSQRIA Trigger: TGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| 3UTR TCA 72 bp | GCAAATGGGCTCGAAGATGAAACTCCATTGACCAAATaGTTGTCTAGCTCACACAAAGCCTGGGTGTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: ANGLEDETPLTK*LSSSHKAWVWQ Trigger: CTGCCACACCCAGGCTTTGTGTGAGCTAGACAATCATTTGGTCAATGGAGTTTCATCTTCGAGCCCATTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
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| 3UTR TCA 72 bp | AAACATCAGTTTGTTTGTTTGTTTGTTTTCCCCGCTTaGCTCTCAGGCTCAGCCTCTATAGGCCCTGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: KHQFVCLFVFPA*LSGSASIGPGR Trigger: TCTGCCAGGGCCTATAGAGGCTGAGCCTGAGAGTCAAGCGGGGAAAACAAACAAACAAACAAACTGATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
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| 3UTR CCA 72 bp | GAAGCAAGTACGGAGGCAGCTGAGTACTTAGCGAAGTaGACAGAATATCTCCAAGATATGAATCCCTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: EASTEAAEYLAK*TEYLQDMNPSS Trigger: AGAGGAGGGATTCATATCTTGGAGATATTCTGTCCACTTCGCTAAGTACTCAGCTGCCTCCGTACTTGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
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| 3UTR CCA 72 bp | GTCATCCCAGCCACACAGAGCCAGCCCTACAACAAATaGTTTATTCCAAAATTCTGCAAGGAATTGAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: VIPATQSQPYNK*FIPKFCKELKA Trigger: TGCCTTCAATTCCTTGCAGAATTTTGGAATAAACCATTTGTTGTAGGGCTGGCTCTGTGTGGCTGGGATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
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| CDS-3UTR TCA 90 bp | GTGAGCTCGGGGCTAGGGGGACTGAGGCAGAAAGATCCTAAATTCAAGGTCACGCAGCGTCCGCGTCACTaGGCATGGCCGCGGGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VSSGLGGLRQKDPKFKVTQRPRH*AWPRGP Trigger: GGGCCCCCGCGGCCATGCTCAGTGACGCGGACGCTG...CGTGACCTTGAATTTAGGATCTTTCTGCCTCAGTCCCCCTAGCCCCGAGCTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
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| CDS-3UTR CCA 90 bp | CCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGTGGCAAAGCTTTGGCGCCGCCGCCGGGTACTaGAAGAGCGAGCAGGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: PMLGLLQFSYLRPWQSFGAAAGY*KSEQGA Trigger: CGCGCCCTGCTCGCTCTTCCAGTACCCGGCGGCGGC...GCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR CCA 90 bp | GCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATGCCGCCGCCGGGTACTaGAAGAGCGAGCAGGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: AAVAKLWRLLSENCTKQDAAAGY*KSEQGA Trigger: CGCGCCCTGCTCGCTCTTCCAGTACCCGGCGGCGGC...ATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR TCA 90 bp | CCAGTCACTTTAAAACCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGCACCGGGGAGGAGGCTaGCGCTCCCTCCGCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: PVTLKPMLGLLQFSYLRPHRGGG*RSLRLP Trigger: GGGGAGGCGGAGGGAGCGTCAGCCTCCTCCCCGGTG...CGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGGTTTTAAAGTGACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR TCA 90 bp | CCAGTCACTTTAAAACCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGCAGCGTCCGCGTCACTaGGCATGGCCGCGGGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PVTLKPMLGLLQFSYLRPQRPRH*AWPRGP Trigger: GGGCCCCCGCGGCCATGCTCAGTGACGCGGACGCTG...CGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGGTTTTAAAGTGACTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR GCA 90 bp | CCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGCCATAGGGGCCGGTTaGACAGGTAGACGTGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: PAAVAKLWRLLSENCTKQAIGAG*TGRRGR Trigger: GCGCCCACGTCTACCTGTGCAACCGGCCCCTATGGC...CTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR TCA 90 bp | GTGAGCTCGGGGCTAGGGGGACTGAGGCAGAAAGATCCTAAATTCAAGGTCACGGGTGCCGGTGGAATTTaGGCCATAGGGGCCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: VSSGLGGLRQKDPKFKVTGAGGI*AIGAGC Trigger: GCAACCGGCCCCTATGGCTCAAATTCCACCGGCACC...CGTGACCTTGAATTTAGGATCTTTCTGCCTCAGTCCCCCTAGCCCCGAGCTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
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| CDS-3UTR TCA 90 bp | ACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGTTGCTGGACAGGCGTaGCAAGCCACCGCTGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TCGRGKALAPSLRELHKTVAGQA*QATAGE Trigger: CTCCCCAGCGGTGGCTTGTCACGCCTGTCCAGCAAC...TGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR GCA 90 bp | CCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGTGGCAAAGCTTTGGCCGCAGGTCACCCACTTaGCCCCCTGGAAGCGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: PMLGLLQFSYLRPWQSFGRRSPT*PPGSAS Trigger: ACTGGCGCTTCCAGGGGGGCAAGTGGGTGACCTGCG...GCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR GCA 90 bp | CCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGTGGCAAAGCTTTGGCACGGCCTCCCCACCCTaGCATAGCAGGGAAGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: PMLGLLQFSYLRPWQSFGTASPP*HSREGR Trigger: CCGACCTTCCCTGCTATGGCAGGGTGGGGAGGCCGT...GCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR CCA 90 bp | CCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGTGACAAGCCACCGCTaGGGAGGGTTGGCCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: PAAVAKLWRLLSENCTKQVTSHR*GGLATS Trigger: AGAGGTGGCCAACCCTCCCCAGCGGTGGCTTGTCAC...CTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR TCA 90 bp | CCCTTCTCTTCCCGAAGCAAAAATATTTTAACCCTCTGGGCTGCTGTTTGCTTACAGCGTCCGCGTCACTaGGCATGGCCGCGGGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PFSSRSKNILTLWAAVCLQRPRH*AWPRGP Trigger: GGGCCCCCGCGGCCATGCTCAGTGACGCGGACGCTG...TAAGCAAACAGCAGCCCAGAGGGTTAAAATATTTTTGCTTCGGGAAGAGAAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
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| CDS-3UTR GCA 90 bp | GCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACAACGGCCTCCCCACCCTaGCATAGCAGGGAAGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: AVAKLWRLLSENCTKQDTTASPP*HSREGR Trigger: CCGACCTTCCCTGCTATGGCAGGGTGGGGAGGCCGT...TGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR CCA 90 bp | ACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAACCGCTGGGGAGGGTTaGCCACCTCTTCGCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: TCGRGKALAPSLRELHKTTAGEG*PPLRSV Trigger: AACAGAGCGAAGAGGTGGCCAACCCTCCCCAGCGGT...TGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR CCA 90 bp | TGCTTCAGTTTAGTTACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGCGAGTTTCCATTGCTaGGGGTGCTGGGAGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: CFSLVTCGRGKALAPSLRASFHC*GCWETG Trigger: GCCTGTCTCCCAGCACCCCCAGCAATGGAAACTCGC...TCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR TCA 90 bp | AAGTGTGTAGAAGCAAGTACGGAGGCAGCTGAGTACTTAGCGAAGTGGACAGAAGTTGCTGGACAGGCGTaGCAAGCCACCGCTGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: KCVEASTEAAEYLAKWTEVAGQA*QATAGE Trigger: CTCCCCAGCGGTGGCTTGTCACGCCTGTCCAGCAAC...TTCTGTCCACTTCGCTAAGTACTCAGCTGCCTCCGTACTTGCTTCTACACACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
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| CDS-3UTR GCA 90 bp | CCAGTCACTTTAAAACCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGCGCAGGTCACCCACTTaGCCCCCTGGAAGCGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: PVTLKPMLGLLQFSYLRPRRSPT*PPGSAS Trigger: ACTGGCGCTTCCAGGGGGGCAAGTGGGTGACCTGCG...CGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGGTTTTAAAGTGACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR GCA 90 bp | CCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGTGGCAAAGCTTTGGCTTCCATTGCTGGGGGTaGTGGGAGACAGGCGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: PMLGLLQFSYLRPWQSFGFHCWG*WETGAF Trigger: GAAAGCGCCTGTCTCCCAGCACCCCCAGCAATGGAA...GCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR CCA 90 bp | CCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATAGCTCAGGCTGTCCATaGAGTAGCGCGCGGTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PWQSFGAFSQRIAQNRIHSSGCP*SSARWP Trigger: CGGCCACCGCGCGCTACTCCATGGACAGCCTGAGCT...ATGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR CCA 90 bp | TTGCACATACAAAGCCCTGAGTTCAATCTCCAGCATGTGTGTGTGTTTCAGAAAGCCGCCGCCGGGTACTaGAAGAGCGAGCAGGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: LHIQSPEFNLQHVCVFQKAAAGY*KSEQGA Trigger: CGCGCCCTGCTCGCTCTTCCAGTACCCGGCGGCGGC...TTTCTGAAACACACACACATGCTGGAGATTGAACTCAGGGCTTTGTATGTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
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| CDS-3UTR CCA 90 bp | GCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATGTGAGAGGAGGCCGTTaGTCTGTGGCACGGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: AAVAKLWRLLSENCTKQDVRGGR*SVARFS Trigger: AGAGAACCGTGCCACAGACCAACGGCCTCCTCTCAC...ATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR CCA 90 bp | ACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAACCTCTTCGCTCTGTTaGGGTGAGAGGAGGCCGTTG | + |
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Preference number: 4 (lower is better) Translates to: TCGRGKALAPSLRELHKTTSSLC*GERRPL Trigger: CAACGGCCTCCTCTCACCCCAACAGAGCGAAGAGGT...TGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR TCA 90 bp | TCTCCAAGATATGAATCCCTCCTCTTAACTGCAGTTGTGGTTTTGCAAATTCTTCACCGGGGAGGAGGCTaGCGCTCCCTCCGCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: SPRYESLLLTAVVVLQILHRGGG*RSLRLP Trigger: GGGGAGGCGGAGGGAGCGTCAGCCTCCTCCCCGGTG...AAGAATTTGCAAAACCACAACTGCAGTTAAGAGGAGGGATTCATATCTTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
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| CDS-3UTR TCA 90 bp | CCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGTGGCAAAGCTTTGGCAGGCCGTCACAGCGATaGACTGTGTCTCTGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: PMLGLLQFSYLRPWQSFGRPSQR*TVSLRR Trigger: CCTTCTCAGAGACACAGTTCATCGCTGTGACGGCCT...GCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR GCA 90 bp | AATTCAAGGTCACGTCAACTTCACAGCAAGTTGCAGGCAGCCTGGAGTCTTTTACGCAGGTCACCCACTTaGCCCCCTGGAAGCGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: NSRSRQLHSKLQAAWSLLRRSPT*PPGSAS Trigger: ACTGGCGCTTCCAGGGGGGCAAGTGGGTGACCTGCG...TAAAAGACTCCAGGCTGCCTGCAACTTGCTGTGAAGTTGACGTGACCTTGAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
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| CDS-3UTR GCA 90 bp | CCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGTGTTATTGTCCGCTTTaGCGCAGGTCACCCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: PAAVAKLWRLLSENCTKQCYCPL*RRSPTC Trigger: GCAAGTGGGTGACCTGCGGCAAAGCGGACAATAACA...CTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR GCA 90 bp | CTGGTGAGCTCGGGGCTAGGGGGACTGAGGCAGAAAGATCCTAAATTCAAGGTCCCAAAGGAAATCTCCTaGCTCATCCAGTGGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LVSSGLGGLRQKDPKFKVPKEIS*LIQWEP Trigger: TGGCTCCCACTGGATGAGGCAGGAGATTTCCTTTGG...GACCTTGAATTTAGGATCTTTCTGCCTCAGTCCCCCTAGCCCCGAGCTCACCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
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| CDS-3UTR CCA 90 bp | ACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACATTGGTCACAGGTTGCTaGACAGGCGTGACAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TCGRGKALAPSLRELHKTLVTGC*TGVTSH Trigger: GTGGCTTGTCACGCCTGTCCAGCAACCTGTGACCAA...TGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR TCA 90 bp | CTCAAGGTCCAACCCTTCTCTTCCCGAAGCAAAAATATTTTAACCCTCTGGGCTGGTGCCGGTGGAATTTaGGCCATAGGGGCCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LKVQPFSSRSKNILTLWAGAGGI*AIGAGC Trigger: GCAACCGGCCCCTATGGCTCAAATTCCACCGGCACC...AGCCCAGAGGGTTAAAATATTTTTGCTTCGGGAAGAGAAGGGTTGGACCTTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
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| CDS-3UTR TCA 90 bp | AGTTGCAGGCAGCCTGGAGTCTTTTACTCTTGTCTCTTAGAGGGAGATGACCCGAGGCCGTCACAGCGATaGACTGTGTCTCTGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: SCRQPGVFYSCLLEGDDPRPSQR*TVSLRR Trigger: CCTTCTCAGAGACACAGTTCATCGCTGTGACGGCCT...CGGGTCATCTCCCTCTAAGAGACAAGAGTAAAAGACTCCAGGCTGCCTGCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
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| CDS-3UTR GCA 90 bp | GAAGCAAGAATGTTCGAGGCCAATATATGCAAAAACAGGGCTAGGGCTATAGCTGCCATAGGGGCCGGTTaGACAGGTAGACGTGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: EARMFEANICKNRARAIAAIGAG*TGRRGR Trigger: GCGCCCACGTCTACCTGTGCAACCGGCCCCTATGGC...AGCTATAGCCCTAGCCCTGTTTTTGCATATATTGGCCTCGAACATTCTTGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
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| CDS-3UTR GCA 90 bp | CCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGTGGCAAAGCTTTGGCTGTTATTGTCCGCTTTaGCGCAGGTCACCCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: PMLGLLQFSYLRPWQSFGCYCPL*RRSPTC Trigger: GCAAGTGGGTGACCTGCGGCAAAGCGGACAATAACA...GCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR GCA 90 bp | CCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGTGGCAAAGCTTTGGCCCAAAGGAAATCTCCTaGCTCATCCAGTGGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: PMLGLLQFSYLRPWQSFGPKEIS*LIQWEP Trigger: TGGCTCCCACTGGATGAGGCAGGAGATTTCCTTTGG...GCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR GCA 90 bp | ACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACATTGTTGGTCACAGGTTaGTGGACAGGCGTGACAAGC | + |
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Preference number: 4 (lower is better) Translates to: TCGRGKALAPSLRELHKTLLVTG*WTGVTS Trigger: GCTTGTCACGCCTGTCCAGCAACCTGTGACCAACAA...TGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR CCA 90 bp | TTTGGTAACCTAGGCAAAGAACACAACAAAACACCACCAGGTCCATCTGGAAAGAGCTCAGGCTGTCCATaGAGTAGCGCGCGGTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: FGNLGKEHNKTPPGPSGKSSGCP*SSARWP Trigger: CGGCCACCGCGCGCTACTCCATGGACAGCCTGAGCT...CTTTCCAGATGGACCTGGTGGTGTTTTGTTGTGTTCTTTGCCTAGGTTACCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR CCA 90 bp | GCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACAGAGGCCGTTGGTCTGTaGCACGGTTCTCTCACCGTT | + |
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Preference number: 4 (lower is better) Translates to: AVAKLWRLLSENCTKQDTEAVGL*HGSLTV Trigger: AACGGTGAGAGAACCGTGCCACAGACCAACGGCCTC...TGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR CCA 90 bp | GCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACACATTGCTGGGGGTGCTaGGAGACAGGCGCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVAKLWRLLSENCTKQDTHCWGC*ETGAFS Trigger: AGAGAAAGCGCCTGTCTCCCAGCACCCCCAGCAATG...TGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR TCA 90 bp | CTCAAGGTCCAACCCTTCTCTTCCCGAAGCAAAAATATTTTAACCCTCTGGGCTTTCGCTCTGTTGGGGTaGGAGGAGGCCGTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKVQPFSSRSKNILTLWAFALLG*EEAVGL Trigger: CAGACCAACGGCCTCCTCTCACCCCAACAGAGCGAA...AGCCCAGAGGGTTAAAATATTTTTGCTTCGGGAAGAGAAGGGTTGGACCTTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
||
| CDS-3UTR GCA 90 bp | CCACACAGAGCCAGCCCTACAACAAATGGTTTATTCCAAAATTCTGCAAGGAATGCCATAGGGGCCGGTTaGACAGGTAGACGTGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PHRASPTTNGLFQNSARNAIGAG*TGRRGR Trigger: GCGCCCACGTCTACCTGTGCAACCGGCCCCTATGGC...ATTCCTTGCAGAATTTTGGAATAAACCATTTGTTGTAGGGCTGGCTCTGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
||
| CDS-3UTR GCA 90 bp | ACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAAGGGCATGGGATGTCTaGAGGGGCAAGGACTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: TCGRGKALAPSLRELHKTRAWDV*RGKDLI Trigger: TATTAAGTCCTTGCCCCTGCAGACATCCCATGCCCT...TGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | TTGCACATACAAAGCCCTGAGTTCAATCTCCAGCATGTGTGTGTGTTTCAGAAAAGCTCAGGCTGTCCATaGAGTAGCGCGCGGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LHIQSPEFNLQHVCVFQKSSGCP*SSARWP Trigger: CGGCCACCGCGCGCTACTCCATGGACAGCCTGAGCT...TTTCTGAAACACACACACATGCTGGAGATTGAACTCAGGGCTTTGTATGTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTCAGTTTAGTTACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAATGTGCAGCCTCGGTTaGTATTTGTGCAGAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CFSLVTCGRGKALAPSLRMCSLG*YLCRDC Trigger: GCAGTCTCTGCACAAATACCAACCGAGGCTGCACAT...TCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGTGTAGAAGCAAGTACGGAGGCAGCTGAGTACTTAGCGAAGTGGACAGAAGAGGCCGTTGGTCTGTaGCACGGTTCTCTCACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KCVEASTEAAEYLAKWTEEAVGL*HGSLTV Trigger: AACGGTGAGAGAACCGTGCCACAGACCAACGGCCTC...TTCTGTCCACTTCGCTAAGTACTCAGCTGCCTCCGTACTTGCTTCTACACACTT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
||
| CDS-3UTR CCA 90 bp | GCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATTGGTCACAGGTTGCTaGACAGGCGTGACAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AVAKLWRLLSENCTKQDTLVTGC*TGVTSH Trigger: GTGGCTTGTCACGCCTGTCCAGCAACCTGTGACCAA...TGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACACGATGTCTAGCTTGTTaGTCACAGGTTGCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TCGRGKALAPSLRELHKTRCLAC*SQVAGQ Trigger: CTGTCCAGCAACCTGTGACCAACAAGCTAGACATCG...TGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGTGTAGAAGCAAGTACGGAGGCAGCTGAGTACTTAGCGAAGTGGACAGAACATTGCTGGGGGTGCTaGGAGACAGGCGCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCVEASTEAAEYLAKWTEHCWGC*ETGAFS Trigger: AGAGAAAGCGCCTGTCTCCCAGCACCCCCAGCAATG...TTCTGTCCACTTCGCTAAGTACTCAGCTGCCTCCGTACTTGCTTCTACACACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
||
| CDS-3UTR CCA 90 bp | ACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACATGTCCTCACACTTTATaGGGGGCGAGTTTCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TCGRGKALAPSLRELHKTCPHTL*GASFHC Trigger: GCAATGGAAACTCGCCCCCCATAAAGTGTGAGGACA...TGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTCACTTTAAAACCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGTCCGGGAAGAAGTTTTaGACGCCGTACCGACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVTLKPMLGLLQFSYLRPSGKKF*TPYRPP Trigger: TGGAGGTCGGTACGGCGTTCAAAACTTCTTCCCGGA...CGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGGTTTTAAAGTGACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR TCA 90 bp | TTACTGAAGGGGGAAGTGGGGATGACCAAGGAAAGAGGATTAAGCAGGGTTTTTCCTCCAGGGACAATCTaGTGGGATCTAGGGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLKGEVGMTKERGLSRVFPPGTI*WDLGES Trigger: GGATTCCCCTAGATCCCATCAGATTGTCCCTGGAGG...AAAAACCCTGCTTAATCCTCTTTCCTTGGTCATCCCCACTTCCCCCTTCAGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
||
| CDS-3UTR TCA 90 bp | AAGTGTGTAGAAGCAAGTACGGAGGCAGCTGAGTACTTAGCGAAGTGGACAGAACTTGAGGCAAAGTGTTaGCAAAGGGCTCCGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KCVEASTEAAEYLAKWTELEAKC*QRAPGR Trigger: TCTTCCCGGAGCCCTTTGTCAACACTTTGCCTCAAG...TTCTGTCCACTTCGCTAAGTACTCAGCTGCCTCCGTACTTGCTTCTACACACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
||
| CDS-3UTR GCA 90 bp | AAGGTCACGTCAACTTCACAGCAAGTTGCAGGCAGCCTGGAGTCTTTTACTCTTTGTTATTGTCCGCTTTaGCGCAGGTCACCCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVTSTSQQVAGSLESFTLCYCPL*RRSPTC Trigger: GCAAGTGGGTGACCTGCGGCAAAGCGGACAATAACA...AAGAGTAAAAGACTCCAGGCTGCCTGCAACTTGCTGTGAAGTTGACGTGACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTCAGTTTAGTTACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGACTCGGTTGGTATTTGTaGAGAGACTGCAACACTATC | + |
|
Preference number: 4 (lower is better) Translates to: CFSLVTCGRGKALAPSLRLGWYL*RDCNTI Trigger: GATAGTGTTGCAGTCTCTGCACAAATACCAACCGAG...TCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTCACTTTAAAACCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGTTGTTGGTCACAGGTTaGTGGACAGGCGTGACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVTLKPMLGLLQFSYLRPLLVTG*WTGVTS Trigger: GCTTGTCACGCCTGTCCAGCAACCTGTGACCAACAA...CGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGGTTTTAAAGTGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | GCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACAAGGGCATGGGATGTCTaGAGGGGCAAGGACTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: AVAKLWRLLSENCTKQDTRAWDV*RGKDLI Trigger: TATTAAGTCCTTGCCCCTGCAGACATCCCATGCCCT...TGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTCACGTCAACTTCACAGCAAGTTGCAGGCAGCCTGGAGTCTTTTACTCTTTCCTGCCTCATCCAGTaGGAGCCAGTGTTAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KVTSTSQQVAGSLESFTLSCLIQ*EPVLGD Trigger: ATCTCCTAACACTGGCTCCCACTGGATGAGGCAGGA...AAGAGTAAAAGACTCCAGGCTGCCTGCAACTTGCTGTGAAGTTGACGTGACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR CCA 90 bp | CAGGATACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAAGTGACAAGCCACCGCTaGGGAGGGTTGGCCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QDTSKVEGKSLFGNLGKEVTSHR*GGLATS Trigger: AGAGGTGGCCAACCCTCCCCAGCGGTGGCTTGTCAC...TTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGTATCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | GCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATTCTGGGAAGACAGGTaGGCTCATTCTGGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVAKLWRLLSENCTKQDTFWEDR*AHSGCP Trigger: TGGACATCCAGAATGAGCCCACCTGTCTTCCCAGAA...TGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| 3UTR CAA 72 bp | TGCTTCAGTTTAGTTACCTGCGGCCGTGGCAAAGCTTaGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CFSLVTCGRGKA*APSLRELHKTG Trigger: TCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTGAGCTCGGGGCTAGGGGGACTGAGGCAGAAAGATCCTAAATTCAAGGTCCACCTTTGTTATTGGTaGGTTTTAACTTCCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVSSGLGGLRQKDPKFKVHLCYW*VLTSQR Trigger: CCTTTGGGAAGTTAAAACTCACCAATAACAAAGGTG...GACCTTGAATTTAGGATCTTTCTGCCTCAGTCCCCCTAGCCCCGAGCTCACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR TCA 90 bp | CCTAAATTCAAGGTCACGTCAACTTCACAGCAAGTTGCAGGCAGCCTGGAGTCTGATGAACTGTGTCTCTaGGAAGGTGAAGGTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PKFKVTSTSQQVAGSLESDELCL*EGEGLS Trigger: ACTCAGACCTTCACCTTCTCAGAGACACAGTTCATC...AGACTCCAGGCTGCCTGCAACTTGCTGTGAAGTTGACGTGACCTTGAATTTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR TCA 90 bp | TTTGGTAACCTAGGCAAAGAACACAACAAAACACCACCAGGTCCATCTGGAAAGTCCGGGAAGAAGTTTTaGACGCCGTACCGACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FGNLGKEHNKTPPGPSGKSGKKF*TPYRPP Trigger: TGGAGGTCGGTACGGCGTTCAAAACTTCTTCCCGGA...CTTTCCAGATGGACCTGGTGGTGTTTTGTTGTGTTCTTTGCCTAGGTTACCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | CAGGATACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAACCTGGCACGGGAGACTaGCCGGAAACTTCTTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: QDTSKVEGKSLFGNLGKEPGTGD*PETSWT Trigger: CGTCCAAGAAGTTTCCGGGCAGTCTCCCGTGCCAGG...TTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGTATCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | CAGGATACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAAGGGGCGAGTTTCCATTaGTGGGGGTGCTGGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QDTSKVEGKSLFGNLGKEGASFH*WGCWET Trigger: TGTCTCCCAGCACCCCCAGCAATGGAAACTCGCCCC...TTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGTATCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTCACGTCAACTTCACAGCAAGTTGCAGGCAGCCTGGAGTCTTTTACTCTTATGTGCAGCCTCGGTTaGTATTTGTGCAGAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVTSTSQQVAGSLESFTLMCSLG*YLCRDC Trigger: GCAGTCTCTGCACAAATACCAACCGAGGCTGCACAT...AAGAGTAAAAGACTCCAGGCTGCCTGCAACTTGCTGTGAAGTTGACGTGACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR CCA 90 bp | CAGGATACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAAACCGCTGGGGAGGGTTaGCCACCTCTTCGCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QDTSKVEGKSLFGNLGKETAGEG*PPLRSV Trigger: AACAGAGCGAAGAGGTGGCCAACCCTCCCCAGCGGT...TTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGTATCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | CACCGGGCACTCGTTCTTCATAGCCTGCTTTTTCTGAACATTTCTCGTTTCCCATTCTGGGAAGACAGGTaGGCTCATTCTGGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRALVLHSLLFLNISRFPFWEDR*AHSGCP Trigger: TGGACATCCAGAATGAGCCCACCTGTCTTCCCAGAA...TGGGAAACGAGAAATGTTCAGAAAAAGCAGGCTATGAAGAACGAGTGCCCGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | ACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAACACAACGCGAGTTTCCATTGCTaGGGGTGCTGGGAGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSKVEGKSLFGNLGKEHNASFHC*GCWETG Trigger: GCCTGTCTCCCAGCACCCCCAGCAATGGAAACTCGC...GTTGTGTTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | GCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACAAAGCCCCCATGCCTTTaGAGGTGTCTTTACTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: AVAKLWRLLSENCTKQDTKPPCL*RCLYCT Trigger: AGTACAGTAAAGACACCTCCAAAGGCATGGGGGCTT...TGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTGAACGAGGTGCCGGTGGAATTTaGGCCATAGGGGCCGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSEHFSFPINESIQHLERGAGGI*AIGAGC Trigger: GCAACCGGCCCCTATGGCTCAAATTCCACCGGCACC...TCGTTCAAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATCAAAGGTAGGCCGTCACAGCGATaGACTGTGTCTCTGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KALAPSLRELHKTGYIKGRPSQR*TVSLRR Trigger: CCTTCTCAGAGACACAGTTCATCGCTGTGACGGCCT...ACCTTTGATGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCTTTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTCCTGGCACGGGAGACTaGCCGGAAACTTCTTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: PAFSEHFSFPINESIQHLPGTGD*PETSWT Trigger: CGTCCAAGAAGTTTCCGGGCAGTCTCCCGTGCCAGG...AAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAAAGCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACATATTTGTGCAGAGACTaGAACACTATCATCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TCGRGKALAPSLRELHKTYLCRD*NTIICV Trigger: CACACAGATGATAGTGTTGCAGTCTCTGCACAAATA...TGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | CCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGTGGCAAAGCTTTGGCTATTTGTGCAGAGACTaGAACACTATCATCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PMLGLLQFSYLRPWQSFGYLCRD*NTIICV Trigger: CACACAGATGATAGTGTTGCAGTCTCTGCACAAATA...GCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | CAGGATACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAATTCCATTGCTGGGGGTaGTGGGAGACAGGCGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QDTSKVEGKSLFGNLGKEFHCWG*WETGAF Trigger: GAAAGCGCCTGTCTCCCAGCACCCCCAGCAATGGAA...TTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGTATCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | ACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAACACAACACCTCTTCGCTCTGTTaGGGTGAGAGGAGGCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSKVEGKSLFGNLGKEHNTSSLC*GERRPL Trigger: CAACGGCCTCCTCTCACCCCAACAGAGCGAAGAGGT...GTTGTGTTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR TCA 90 bp | TCTTGCACATACAAAGCCCTGAGTTCAATCTCCAGCATGTGTGTGTGTTTCAGAGTGTCTCTGAGAAGGTaGAGGTCTGAGTCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCTYKALSSISSMCVCFRVSLRR*RSESWK Trigger: CTTCCAAGACTCAGACCTTCACCTTCTCAGAGACAC...TCTGAAACACACACACATGCTGGAGATTGAACTCAGGGCTTTGTATGTGCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTGAACGATTCGCTCTGTTGGGGTaGGAGGAGGCCGTTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSEHFSFPINESIQHLERFALLG*EEAVGL Trigger: CAGACCAACGGCCTCCTCTCACCCCAACAGAGCGAA...TCGTTCAAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | CACCGGGCACTCGTTCTTCATAGCCTGCTTTTTCTGAACATTTCTCGTTTCCCAATCATCTCAGTTTGGTaGCGGTGGAATTTGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HRALVLHSLLFLNISRFPIISVW*RWNLSH Trigger: ATGGCTCAAATTCCACCGGCACCAAACTGAGATGAT...TGGGAAACGAGAAATGTTCAGAAAAAGCAGGCTATGAAGAACGAGTGCCCGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | CCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATCTCGGTTGGTATTTGTaGAGAGACTGCAACACTATC | + |
|
Preference number: 4 (lower is better) Translates to: PWQSFGAFSQRIAQNRIHLGWYL*RDCNTI Trigger: GATAGTGTTGCAGTCTCTGCACAAATACCAACCGAG...ATGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | CCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATCATAATAAGCCCCCATaGCTTTGGAGGTGTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PWQSFGAFSQRIAQNRIHHNKPP*LWRCLY Trigger: GTAAAGACACCTCCAAAGGCATGGGGGCTTATTATG...ATGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAGGTCCAACCCTTCTCTTCCCGAAGCAAAAATATTTTAACCCTCTGGGCTTGCCCGGAAACTTCTTaGACGCTTTGTCTAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKVQPFSSRSKNILTLWACPETS*TLCLSP Trigger: TGGACTTAGACAAAGCGTCCAAGAAGTTTCCGGGCA...AGCCCAGAGGGTTAAAATATTTTTGCTTCGGGAAGAGAAGGGTTGGACCTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
||
| CDS-3UTR CCA 90 bp | TCTCCAAGATATGAATCCCTCCTCTTAACTGCAGTTGTGGTTTTGCAAATTCTTGTGAGAGGAGGCCGTTaGTCTGTGGCACGGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPRYESLLLTAVVVLQILVRGGR*SVARFS Trigger: AGAGAACCGTGCCACAGACCAACGGCCTCCTCTCAC...AAGAATTTGCAAAACCACAACTGCAGTTAAGAGGAGGGATTCATATCTTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTCTTCCCGAAGCAAAAATATTTTAACCCTCTGGGCTGCTGTTTGCTTACGATGTCTAGCTTGTTaGTCACAGGTTGCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: PFSSRSKNILTLWAAVCLRCLAC*SQVAGQ Trigger: CTGTCCAGCAACCTGTGACCAACAAGCTAGACATCG...TAAGCAAACAGCAGCCCAGAGGGTTAAAATATTTTTGCTTCGGGAAGAGAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
||
| CDS-3UTR CCA 90 bp | AAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATCAAAGGTCAGGTGGGCTCATTCTaGATGTCCATGGTAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KALAPSLRELHKTGYIKGQVGSF*MSMVVQ Trigger: CTGGACTACCATGGACATCCAGAATGAGCCCACCTG...ACCTTTGATGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATCAAAGGTGTGTCTCTGAGAAGGTaGAGGTCTGAGTCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KALAPSLRELHKTGYIKGVSLRR*RSESWK Trigger: CTTCCAAGACTCAGACCTTCACCTTCTCAGAGACAC...ACCTTTGATGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR TCA 90 bp | ACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAACACAACCTTGAGGCAAAGTGTTaGCAAAGGGCTCCGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSKVEGKSLFGNLGKEHNLEAKC*QRAPGR Trigger: TCTTCCCGGAGCCCTTTGTCAACACTTTGCCTCAAG...GTTGTGTTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | CAGGATACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAACCAAAGGAAATCTCCTaGCTCATCCAGTGGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDTSKVEGKSLFGNLGKEPKEIS*LIQWEP Trigger: TGGCTCCCACTGGATGAGGCAGGAGATTTCCTTTGG...TTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGTATCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | CAGGATACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAACAGGTGGGCTCATTCTaGATGTCCATGGTAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QDTSKVEGKSLFGNLGKEQVGSF*MSMVVQ Trigger: CTGGACTACCATGGACATCCAGAATGAGCCCACCTG...TTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGTATCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGTGTAGAAGCAAGTACGGAGGCAGCTGAGTACTTAGCGAAGTGGACAGAACACCTTTGTTATTGGTaGGTTTTAACTTCCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KCVEASTEAAEYLAKWTEHLCYW*VLTSQR Trigger: CCTTTGGGAAGTTAAAACTCACCAATAACAAAGGTG...TTCTGTCCACTTCGCTAAGTACTCAGCTGCCTCCGTACTTGCTTCTACACACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
||
| CDS-3UTR TCA 90 bp | CCAGTCACTTTAAAACCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGCACCTTTGTTATTGGTaGGTTTTAACTTCCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVTLKPMLGLLQFSYLRPHLCYW*VLTSQR Trigger: CCTTTGGGAAGTTAAAACTCACCAATAACAAAGGTG...CGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGGTTTTAAAGTGACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR TCA 90 bp | ACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAACACAACGTGTCTCTGAGAAGGTaGAGGTCTGAGTCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSKVEGKSLFGNLGKEHNVSLRR*RSESWK Trigger: CTTCCAAGACTCAGACCTTCACCTTCTCAGAGACAC...GTTGTGTTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATCAAAGGTTTTTCCTTGGCAAGCTaGTCTTCTGGGAAGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KALAPSLRELHKTGYIKGFSLAS*SSGKTG Trigger: ACCTGTCTTCCCAGAAGATCAGCTTGCCAAGGAAAA...ACCTTTGATGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | CCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATTACATCTTATTGCCCTaGATGTTATTGTCCGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PWQSFGAFSQRIAQNRIHYILLP*MLLSAL Trigger: CAAAGCGGACAATAACATGCAGGGCAATAAGATGTA...ATGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCTTTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTTCCTGCCTCATCCAGTaGGAGCCAGTGTTAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PAFSEHFSFPINESIQHLSCLIQ*EPVLGD Trigger: ATCTCCTAACACTGGCTCCCACTGGATGAGGCAGGA...AAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAAAGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| 3UTR CAA 72 bp | ATCCTAAATTCAAGGTCACGTCAACTTCACAGCAAGTaGCAGGCAGCCTGGAGTCTTTTACTCTTGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILNSRSRQLHSK*QAAWSLLLLSL Trigger: AAGAGACAAGAGTAAAAGACTCCAGGCTGCCTGCAACTTGCTGTGAAGTTGACGTGACCTTGAATTTAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR GCA 90 bp | TTGCACATACAAAGCCCTGAGTTCAATCTCCAGCATGTGTGTGTGTTTCAGAAAATCATCTCAGTTTGGTaGCGGTGGAATTTGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHIQSPEFNLQHVCVFQKIISVW*RWNLSH Trigger: ATGGCTCAAATTCCACCGGCACCAAACTGAGATGAT...TTTCTGAAACACACACACATGCTGGAGATTGAACTCAGGGCTTTGTATGTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR GCA 90 bp | AAATTCAAGGTCACGTCAACTTCACAGCAAGTTGCAGGCAGCCTGGAGTCTTTTTACATCTTATTGCCCTaGATGTTATTGTCCGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KFKVTSTSQQVAGSLESFYILLP*MLLSAL Trigger: CAAAGCGGACAATAACATGCAGGGCAATAAGATGTA...AAAAGACTCCAGGCTGCCTGCAACTTGCTGTGAAGTTGACGTGACCTTGAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR GCA 90 bp | AAAGATCCTAAATTCAAGGTCACGTCAACTTCACAGCAAGTTGCAGGCAGCCTGTATTTGTGCAGAGACTaGAACACTATCATCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KDPKFKVTSTSQQVAGSLYLCRD*NTIICV Trigger: CACACAGATGATAGTGTTGCAGTCTCTGCACAAATA...CAGGCTGCCTGCAACTTGCTGTGAAGTTGACGTGACCTTGAATTTAGGATCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR GCA 90 bp | TTGCACATACAAAGCCCTGAGTTCAATCTCCAGCATGTGTGTGTGTTTCAGAAACTCGGTTGGTATTTGTaGAGAGACTGCAACACTATC | + |
|
Preference number: 4 (lower is better) Translates to: LHIQSPEFNLQHVCVFQKLGWYL*RDCNTI Trigger: GATAGTGTTGCAGTCTCTGCACAAATACCAACCGAG...TTTCTGAAACACACACACATGCTGGAGATTGAACTCAGGGCTTTGTATGTGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR CCA 90 bp | CAGGATACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAATGCCCGGAAACTTCTTaGACGCTTTGTCTAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDTSKVEGKSLFGNLGKECPETS*TLCLSP Trigger: TGGACTTAGACAAAGCGTCCAAGAAGTTTCCGGGCA...TTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGTATCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTGAACGATCCTGCCTCATCCAGTaGGAGCCAGTGTTAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSEHFSFPINESIQHLERSCLIQ*EPVLGD Trigger: ATCTCCTAACACTGGCTCCCACTGGATGAGGCAGGA...TCGTTCAAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCTTTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTTGTCCTCACACTTTATaGGGGGCGAGTTTCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: PAFSEHFSFPINESIQHLCPHTL*GASFHC Trigger: GCAATGGAAACTCGCCCCCCATAAAGTGTGAGGACA...AAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAAAGCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCCGAAGCAAAAATATTTTAACCCTCTGGGCTGCTGTTTGCTTAAAGATAAGCCCCCATGCCTTTaGAGGTGTCTTTACTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LFPKQKYFNPLGCCLLKDKPPCL*RCLYCT Trigger: AGTACAGTAAAGACACCTCCAAAGGCATGGGGGCTT...ATCTTTAAGCAAACAGCAGCCCAGAGGGTTAAAATATTTTTGCTTCGGGAAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
||
| CDS-3UTR TCA 90 bp | CCTGCTTTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTGATGAACTGTGTCTCTaGGAAGGTGAAGGTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PAFSEHFSFPINESIQHLDELCL*EGEGLS Trigger: ACTCAGACCTTCACCTTCTCAGAGACACAGTTCATC...AAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAAAGCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCTTTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTTTTTCCTTGGCAAGCTaGTCTTCTGGGAAGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAFSEHFSFPINESIQHLFSLAS*SSGKTG Trigger: ACCTGTCTTCCCAGAAGATCAGCTTGCCAAGGAAAA...AAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAAAGCAGG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | CAGGATACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAAATCATCTCAGTTTGGTaGCGGTGGAATTTGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QDTSKVEGKSLFGNLGKEIISVW*RWNLSH Trigger: ATGGCTCAAATTCCACCGGCACCAAACTGAGATGAT...TTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGTATCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTGAACGAATGTGCAGCCTCGGTTaGTATTTGTGCAGAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSEHFSFPINESIQHLERMCSLG*YLCRDC Trigger: GCAGTCTCTGCACAAATACCAACCGAGGCTGCACAT...TCGTTCAAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | AGTACGGAGGCAGCTGAGTACTTAGCGAAGTGGACAGAATATCTCCAAGATATGATGGGAGCAAGGTACTaGAAGTATATTCAGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: STEAAEYLAKWTEYLQDMMGARY*KYIQIH Trigger: ATGAATCTGAATATACTTCCAGTACCTTGCTCCCAT...CATATCTTGGAGATATTCTGTCCACTTCGCTAAGTACTCAGCTGCCTCCGTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
||
| CDS-3UTR TCA 90 bp | TTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTGAACGAGATGAACTGTGTCTCTaGGAAGGTGAAGGTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSEHFSFPINESIQHLERDELCL*EGEGLS Trigger: ACTCAGACCTTCACCTTCTCAGAGACACAGTTCATC...TCGTTCAAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCTTTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTCATAATAAGCCCCCATaGCTTTGGAGGTGTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PAFSEHFSFPINESIQHLHNKPP*LWRCLY Trigger: GTAAAGACACCTCCAAAGGCATGGGGGCTTATTATG...AAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAAAGCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CCA 90 bp | ACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAACACAACATGGGAGCAAGGTACTaGAAGTATATTCAGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSKVEGKSLFGNLGKEHNMGARY*KYIQIH Trigger: ATGAATCTGAATATACTTCCAGTACCTTGCTCCCAT...GTTGTGTTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTGAACGATACATCTTATTGCCCTaGATGTTATTGTCCGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSEHFSFPINESIQHLERYILLP*MLLSAL Trigger: CAAAGCGGACAATAACATGCAGGGCAATAAGATGTA...TCGTTCAAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS GCA 90 bp | GGGGTAGCGCGCGCCATTGGACGCGGGGTACACGGGTCCGTGGGCTaGTCCGGCCGCCGCCGGGTACTGGAAGAGCGAGCAGGGCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GVARAIGRGVHGSVG*SGRRRVLEERAGRG Trigger: GCCGCGCCCTGCTCGCTCTTCCAGTACCCGGCGGCGGCCGGAGCAGCCCACGGACCCGTGTACCCCGCGTCCAATGGCGCGCGCTACCCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 ENSMUST00000150633.2 |
||
| CDS GCA 90 bp | CCTGGCCGTAGGGATAGGCGCCAGGACCGCCGGCACCACCGCCGCTaGTACCAGCGCCGCTCCCCGAACCCGCAGCGGGGCCGAACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGRRDRRQDRRHHRR*YQRRSPNPQRGRTA Trigger: CGCAGTTCGGCCCCGCTGCGGGTTCGGGGAGCGGCGCTGGTAGCAGCGGCGGTGGTGCCGGCGGTCCTGGCGCCTATCCCTACGGCCAGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 ENSMUST00000150633.2 |
||
| CDS GCA 90 bp | CGCCGGCGCCTGCGGGTTCTGCGCTCCCCGCCTGGCACGGGAGACTaGCCGGAAACTTCTTGGACGCTTTGTCTAAGTCCAGCCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRRLRVLRSPPGTGD*PETSWTLCLSPASG Trigger: CCCAGAGGCTGGACTTAGACAAAGCGTCCAAGAAGTTTCCGGGCAGTCTCCCGTGCCAGGCGGGGAGCGCAGAACCCGCAGGCGCCGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS CCA 90 bp | AGACTGCCCGGAAACTTCTTGGACGCTTTGTCTAAGTCCAGCCTCTaGGGCGAGGGGGCAGCACCGGGGAGGAGGCTGACGCTCCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RLPGNFLDALSKSSL*GEGAAPGRRLTLPP Trigger: CGGAGGGAGCGTCAGCCTCCTCCCCGGTGCTGCCCCCTCGCCCCAGAGGCTGGACTTAGACAAAGCGTCCAAGAAGTTTCCGGGCAGTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS CCA 90 bp | GTGACAAGCCACCGCTGGGGAGGGTTGGCCACCTCTTCGCTCTGTTaGGGTGAGAGGAGGCCGTTGGTCTGTGGCACGGTTCTCTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: VTSHRWGGLATSSLC*GERRPLVCGTVLSP Trigger: CGGTGAGAGAACCGTGCCACAGACCAACGGCCTCCTCTCACCCCAACAGAGCGAAGAGGTGGCCAACCCTCCCCAGCGGTGGCTTGTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS GCA 90 bp | TCCAGCTGCCATCTTCCTCTGATAAGCGCCACGGCCTCCCCACCCTaGCATAGCAGGGAAGGTCGGGTCAGGGTAATACCCCAGGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SSCHLPLISATASPP*HSREGRVRVIPQGM Trigger: CATGCCCTGGGGTATTACCCTGACCCGACCTTCCCTGCTATGGCAGGGTGGGGAGGCCGTGGCGCTTATCAGAGGAAGATGGCAGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS CCA 90 bp | AGCTTGTTGGTCACAGGTTGCTGGACAGGCGTGACAAGCCACCGCTaGGGAGGGTTGGCCACCTCTTCGCTCTGTTGGGGTGAGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLVTGCWTGVTSHR*GGLATSSLCWGERR Trigger: CCTCCTCTCACCCCAACAGAGCGAAGAGGTGGCCAACCCTCCCCAGCGGTGGCTTGTCACGCCTGTCCAGCAACCTGTGACCAACAAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS GCA 90 bp | GCGAGTTTCCATTGCTGGGGGTGCTGGGAGACAGGCGCTTTCTCTTaGAAGCGCTGTTGTACACCCCGGAGTCGCTGGAGTCTAGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: ASFHCWGCWETGAFS*KRCCTPRSRWSLET Trigger: AGTCTCTAGACTCCAGCGACTCCGGGGTGTACAACAGCGCTTGCAAGAGAAAGCGCCTGTCTCCCAGCACCCCCAGCAATGGAAACTCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS TCA 90 bp | AAGAACCGATGTCTAGCTTGTTGGTCACAGGTTGCTGGACAGGCGTaGCAAGCCACCGCTGGGGAGGGTTGGCCACCTCTTCGCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KNRCLACWSQVAGQA*QATAGEGWPPLRSV Trigger: AACAGAGCGAAGAGGTGGCCAACCCTCCCCAGCGGTGGCTTGTCACGCCTGTCCAGCAACCTGTGACCAACAAGCTAGACATCGGTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | GCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATGGTGAGAGGAGGCCGTaGGTCTGTGGCACGGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AAVAKLWRLLSENCTKQDGERRP*VCGTVL Trigger: GAGAACCGTGCCACAGACCAACGGCCTCCTCTCACC...ATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | CACCGGGCACTCGTTCTTCATAGCCTGCTTTTTCTGAACATTTCTCGTTTCCCAGGGGGCGAGTTTCCATaGCTGGGGGTGCTGGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HRALVLHSLLFLNISRFPGGEFP*LGVLGD Trigger: GTCTCCCAGCACCCCCAGCAATGGAAACTCGCCCCC...TGGGAAACGAGAAATGTTCAGAAAAAGCAGGCTATGAAGAACGAGTGCCCGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | GCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATGGTGCCGGTGGAATTaGAGCCATAGGGGCCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AVAKLWRLLSENCTKQDTWCRWN*SHRGRL Trigger: CAACCGGCCCCTATGGCTCAAATTCCACCGGCACCA...TGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGCTCGGGGCTAGGGGGACTGAGGCAGAAAGATCCTAAATTCAAGGTCACGGATGTGCAGCCTCGGTaGGTATTTGTGCAGAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: VSSGLGGLRQKDPKFKVTDVQPR*VFVQRL Trigger: CAGTCTCTGCACAAATACCAACCGAGGCTGCACATC...CGTGACCTTGAATTTAGGATCTTTCTGCCTCAGTCCCCCTAGCCCCGAGCTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR CAA 90 bp | AGTACGGAGGCAGCTGAGTACTTAGCGAAGTGGACAGAATATCTCCAAGATATGGGGGGCGAGTTTCCATaGCTGGGGGTGCTGGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: STEAAEYLAKWTEYLQDMGGEFP*LGVLGD Trigger: GTCTCCCAGCACCCCCAGCAATGGAAACTCGCCCCC...CATATCTTGGAGATATTCTGTCCACTTCGCTAAGTACTCAGCTGCCTCCGTACT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
||
| CDS-3UTR CAA 90 bp | ACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAATGTTATTGTCCGCTTaGCCGCAGGTCACCCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TCGRGKALAPSLRELHKTMLLSA*PQVTHL Trigger: CAAGTGGGTGACCTGCGGCAAAGCGGACAATAACAT...TGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACACCGATGTCTAGCTTGTaGGTCACAGGTTGCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: TCGRGKALAPSLRELHKTPMSSL*VTGCWT Trigger: TGTCCAGCAACCTGTGACCAACAAGCTAGACATCGG...TGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCAGTTTAGTTACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAACCGATGTCTAGCTaGTTGGTCACAGGTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CFSLVTCGRGKALAPSLREPMSS*LVTGCW Trigger: CCAGCAACCTGTGACCAACAAGCTAGACATCGGTTC...TCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS TCA 90 bp | GCACGGTTCTCTCACCGTTATAATATCGGGCTTGAGGCAAAGTGTTaGCAAAGGGCTCCGGGAAGAAGTTTTGAACGCCGTACCGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: ARFSHRYNIGLEAKC*QRAPGRSFERRTDL Trigger: GAGGTCGGTACGGCGTTCAAAACTTCTTCCCGGAGCCCTTTGTCAACACTTTGCCTCAAGCCCGATATTATAACGGTGAGAGAACCGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | GCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATTGCCCTGCATGTTATaGTCCGCTTTGCCGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AVAKLWRLLSENCTKQDTLPCML*SALPQV Trigger: GACCTGCGGCAAAGCGGACAATAACATGCAGGGCAA...TGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | CCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATCTCCGGGAAGAAGTTTaGAACGCCGTACCGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PWQSFGAFSQRIAQNRIHLREEV*NAVPTS Trigger: GGAGGTCGGTACGGCGTTCAAAACTTCTTCCCGGAG...ATGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGTAACCTAGGCAAAGAACACAACAAAACACCACCAGGTCCATCTGGAAAGGGTGAGAGGAGGCCGTaGGTCTGTGGCACGGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FGNLGKEHNKTPPGPSGKGERRP*VCGTVL Trigger: GAGAACCGTGCCACAGACCAACGGCCTCCTCTCACC...CTTTCCAGATGGACCTGGTGGTGTTTTGTTGTGTTCTTTGCCTAGGTTACCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS GCA 90 bp | GGTTCATTCAAGTCCTCCACACCGTCCTCTGTCACTTCCACGATGTaGAGCCTCGGTTGGTATTTGTGCAGAGACTGCAACACTATCATC | + |
|
Preference number: 5 (lower is better) Translates to: GSFKSSTPSSVTSTM*SLGWYLCRDCNTII Trigger: GATGATAGTGTTGCAGTCTCTGCACAAATACCAACCGAGGCTGCACATCGTGGAAGTGACAGAGGACGGTGTGGAGGACTTGAATGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 ENSMUST00000150633.2 |
||
| CDS CCA 90 bp | TCCTCCACACCGTCCTCTGTCACTTCCACGATGTGCAGCCTCGGTTaGTATTTGTGCAGAGACTGCAACACTATCATCTGTGTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSTPSSVTSTMCSLG*YLCRDCNTIICVLL Trigger: CAACAACACACAGATGATAGTGTTGCAGTCTCTGCACAAATACCAACCGAGGCTGCACATCGTGGAAGTGACAGAGGACGGTGTGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 ENSMUST00000150633.2 |
||
| CDS-3UTR CAA 90 bp | CCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATTTGCCCTGCATGTTATaGTCCGCTTTGCCGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PWQSFGAFSQRIAQNRIHLPCML*SALPQV Trigger: GACCTGCGGCAAAGCGGACAATAACATGCAGGGCAA...ATGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | GCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACAAACTTCTTGGACGCTTaGTCTAAGTCCAGCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVAKLWRLLSENCTKQDTNFLDA*SKSSLW Trigger: CCAGAGGCTGGACTTAGACAAAGCGTCCAAGAAGTT...TGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | AATTCAAGGTCACGTCAACTTCACAGCAAGTTGCAGGCAGCCTGGAGTCTTTTATTGCCCTGCATGTTATaGTCCGCTTTGCCGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NSRSRQLHSKLQAAWSLLLPCML*SALPQV Trigger: GACCTGCGGCAAAGCGGACAATAACATGCAGGGCAA...TAAAAGACTCCAGGCTGCCTGCAACTTGCTGTGAAGTTGACGTGACCTTGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTCACTTTAAAACCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGGATGTGCAGCCTCGGTaGGTATTTGTGCAGAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: PVTLKPMLGLLQFSYLRPDVQPR*VFVQRL Trigger: CAGTCTCTGCACAAATACCAACCGAGGCTGCACATC...CGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGGTTTTAAAGTGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS GCA 90 bp | CCGTCCTCTGTCACTTCCACGATGTGCAGCCTCGGTTGGTATTTGTaGAGAGACTGCAACACTATCATCTGTGTGTTGTTGTTGTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSSVTSTMCSLGWYL*RDCNTIICVLLLFA Trigger: TGCAAACAACAACAACACACAGATGATAGTGTTGCAGTCTCTGCACAAATACCAACCGAGGCTGCACATCGTGGAAGTGACAGAGGACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 ENSMUST00000150633.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGTTGAGTCCGTTTATGTaGAAGCTCAAGAAAGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PAAVAKLWRLLSENCTKQLSPFM*KLKKGN Trigger: GTTTCCTTTCTTGAGCTTCAACATAAACGGACTCAA...CTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | GGAGATGATGACTCATTTCCTGTTAAAGGTGACCCAGCAAATGGGCTCGAAGATATGTTATTGTCCGCTTaGCCGCAGGTCACCCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GDDDSFPVKGDPANGLEDMLLSA*PQVTHL Trigger: CAAGTGGGTGACCTGCGGCAAAGCGGACAATAACAT...ATCTTCGAGCCCATTTGCTGGGTCACCTTTAACAGGAAATGAGTCATCATCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATCAAAGGTCTCCGGGAAGAAGTTTaGAACGCCGTACCGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KALAPSLRELHKTGYIKGLREEV*NAVPTS Trigger: GGAGGTCGGTACGGCGTTCAAAACTTCTTCCCGGAG...ACCTTTGATGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGTAACCTAGGCAAAGAACACAACAAAACACCACCAGGTCCATCTGGAAAGCTTGTTGGTCACAGGTaGCTGGACAGGCGTGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: FGNLGKEHNKTPPGPSGKLVGHR*LDRRDK Trigger: CTTGTCACGCCTGTCCAGCAACCTGTGACCAACAAG...CTTTCCAGATGGACCTGGTGGTGTTTTGTTGTGTTCTTTGCCTAGGTTACCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | TTACTGAAGGGGGAAGTGGGGATGACCAAGGAAAGAGGATTAAGCAGGGTTTTTGAACCGATGTCTAGCTaGTTGGTCACAGGTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLKGEVGMTKERGLSRVFEPMSS*LVTGCW Trigger: CCAGCAACCTGTGACCAACAAGCTAGACATCGGTTC...AAAAACCCTGCTTAATCCTCTTTCCTTGGTCATCCCCACTTCCCCCTTCAGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
||
| CDS CCA 90 bp | CCCCAGGGCATGGGATGTCTGCAGGGGCAAGGACTTAATACCATATaGGAGCAAGGTACTGGAAGTATATTCAGATTCATAAGAACCGAT | + |
|
Preference number: 5 (lower is better) Translates to: PQGMGCLQGQGLNTI*EQGTGSIFRFIRTD Trigger: ATCGGTTCTTATGAATCTGAATATACTTCCAGTACCTTGCTCCCATATGGTATTAAGTCCTTGCCCCTGCAGACATCCCATGCCCTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGTAACCTAGGCAAAGAACACAACAAAACACCACCAGGTCCATCTGGAAAGATGTTATTGTCCGCTTaGCCGCAGGTCACCCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FGNLGKEHNKTPPGPSGKMLLSA*PQVTHL Trigger: CAAGTGGGTGACCTGCGGCAAAGCGGACAATAACAT...CTTTCCAGATGGACCTGGTGGTGTTTTGTTGTGTTCTTTGCCTAGGTTACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGTAACCTAGGCAAAGAACACAACAAAACACCACCAGGTCCATCTGGAAAGGATGTGCAGCCTCGGTaGGTATTTGTGCAGAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: FGNLGKEHNKTPPGPSGKDVQPR*VFVQRL Trigger: CAGTCTCTGCACAAATACCAACCGAGGCTGCACATC...CTTTCCAGATGGACCTGGTGGTGTTTTGTTGTGTTCTTTGCCTAGGTTACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | CCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGTGGCAAAGCTTTGGCGTTATAATATCGGGCTaGAGGCAAAGTGTTGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: PMLGLLQFSYLRPWQSFGVIISG*RQSVDK Trigger: TTTGTCAACACTTTGCCTCAAGCCCGATATTATAAC...GCCAAAGCTTTGCCACGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGCGGCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAATCATCTGTGTGTTGTaGTTGTTTGCACCTTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: TCGRGKALAPSLRELHKTIICVL*LFAPLL Trigger: TAACAAAGGTGCAAACAACAACAACACACAGATGAT...TGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGCCGCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | ACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAACACAACCTTGTTGGTCACAGGTaGCTGGACAGGCGTGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSKVEGKSLFGNLGKEHNLVGHR*LDRRDK Trigger: CTTGTCACGCCTGTCCAGCAACCTGTGACCAACAAG...GTTGTGTTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS TCA 90 bp | ATCCAGGAGGAACTAATCTCTTCTTTAACTTTTTCCTTGGCAAGCTaGTCTTCTGGGAAGACAGGTGGGCTCATTCTGGATGTCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: IQEELISSLTFSLAS*SSGKTGGLILDVHG Trigger: ACCATGGACATCCAGAATGAGCCCACCTGTCTTCCCAGAAGATCAGCTTGCCAAGGAAAAAGTTAAAGAAGAGATTAGTTCCTCCTGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | ACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAACACAACCTGCCCGGAAACTTCTaGGACGCTTTGTCTAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSKVEGKSLFGNLGKEHNLPGNF*DALSKS Trigger: GGACTTAGACAAAGCGTCCAAGAAGTTTCCGGGCAG...GTTGTGTTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | GCCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACAATCTGTGTGTTGTTGTaGTTTGCACCTTTGTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: AVAKLWRLLSENCTKQDTICVLL*FAPLLL Trigger: CAATAACAAAGGTGCAAACAACAACAACACACAGAT...TGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | CCGTGGCAAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATGTTATAATATCGGGCTaGAGGCAAAGTGTTGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: PWQSFGAFSQRIAQNRIHVIISG*RQSVDK Trigger: TTTGTCAACACTTTGCCTCAAGCCCGATATTATAAC...ATGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTTGCCACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCTTTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTCCGATGTCTAGCTTGTaGGTCACAGGTTGCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PAFSEHFSFPINESIQHLPMSSL*VTGCWT Trigger: TGTCCAGCAACCTGTGACCAACAAGCTAGACATCGG...AAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAAAGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCTTTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTAACTTCTTGGACGCTTaGTCTAAGTCCAGCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PAFSEHFSFPINESIQHLNFLDA*SKSSLW Trigger: CCAGAGGCTGGACTTAGACAAAGCGTCCAAGAAGTT...AAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAAAGCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTGAACGACTGCCCGGAAACTTCTaGGACGCTTTGTCTAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSEHFSFPINESIQHLERLPGNF*DALSKS Trigger: GGACTTAGACAAAGCGTCCAAGAAGTTTCCGGGCAG...TCGTTCAAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTCACTTTAAAACCAATGCTAGGTCTGCTTCAGTTTAGTTACCTGCGGCCGATCTGTGTGTTGTTGTaGTTTGCACCTTTGTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: PVTLKPMLGLLQFSYLRPICVLL*FAPLLL Trigger: CAATAACAAAGGTGCAAACAACAACAACACACAGAT...CGGCCGCAGGTAACTAAACTGAAGCAGACCTAGCATTGGTTTTAAAGTGACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | TCTTGCACATACAAAGCCCTGAGTTCAATCTCCAGCATGTGTGTGTGTTTCAGATTGAGTCCGTTTATGTaGAAGCTCAAGAAAGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SCTYKALSSISSMCVCFRLSPFM*KLKKGN Trigger: GTTTCCTTTCTTGAGCTTCAACATAAACGGACTCAA...TCTGAAACACACACACATGCTGGAGATTGAACTCAGGGCTTTGTATGTGCAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR CAA 90 bp | AAATTCAAGGTCACGTCAACTTCACAGCAAGTTGCAGGCAGCCTGGAGTCTTTTTTTGCACCTTTGTTATaGGTGAGTTTTAACTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KFKVTSTSQQVAGSLESFFAPLL*VSFNFP Trigger: TGGGAAGTTAAAACTCACCAATAACAAAGGTGCAAA...AAAAGACTCCAGGCTGCCTGCAACTTGCTGTGAAGTTGACGTGACCTTGAATTT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR CAA 90 bp | CTCAAGGTCCAACCCTTCTCTTCCCGAAGCAAAAATATTTTAACCCTCTGGGCTATCATCTGTGTGTTGTaGTTGTTTGCACCTTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LKVQPFSSRSKNILTLWAIICVL*LFAPLL Trigger: TAACAAAGGTGCAAACAACAACAACACACAGATGAT...AGCCCAGAGGGTTAAAATATTTTTGCTTCGGGAAGAGAAGGGTTGGACCTTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
||
| CDS-3UTR CAA 90 bp | AATTCAAGGTCACGTCAACTTCACAGCAAGTTGCAGGCAGCCTGGAGTCTTTTAATCATCTGTGTGTTGTaGTTGTTTGCACCTTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: NSRSRQLHSKLQAAWSLLIICVL*LFAPLL Trigger: TAACAAAGGTGCAAACAACAACAACACACAGATGAT...TAAAAGACTCCAGGCTGCCTGCAACTTGCTGTGAAGTTGACGTGACCTTGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR CAA 90 bp | TTTGGTAACCTAGGCAAAGAACACAACAAAACACCACCAGGTCCATCTGGAAAGACTATCATCTGTGTGTaGTTGTTGTTTGCACCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FGNLGKEHNKTPPGPSGKTIICV*LLFAPL Trigger: CAAAGGTGCAAACAACAACAACACACAGATGATAGT...CTTTCCAGATGGACCTGGTGGTGTTTTGTTGTGTTCTTTGCCTAGGTTACCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCAAGAATGTTCGAGGCCAATATATGCAAAAACAGGGCTAGGGCTATAGCTATCTGTGTGTTGTTGTaGTTTGCACCTTTGTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: EARMFEANICKNRARAIAICVLL*FAPLLL Trigger: CAATAACAAAGGTGCAAACAACAACAACACACAGAT...AGCTATAGCCCTAGCCCTGTTTTTGCATATATTGGCCTCGAACATTCTTGCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCTTTGGCGCCTTCTCTCAGAGAATTGCACAAAACAGGATACATCAAAGGTACTATCATCTGTGTGTaGTTGTTGTTTGCACCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KALAPSLRELHKTGYIKGTIICV*LLFAPL Trigger: CAAAGGTGCAAACAACAACAACACACAGATGATAGT...ACCTTTGATGTATCCTGTTTTGTGCAATTCTCTGAGAGAAGGCGCCAAAGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR CAA 90 bp | TTGCACATACAAAGCCCTGAGTTCAATCTCCAGCATGTGTGTGTGTTTCAGAAAACTATCATCTGTGTGTaGTTGTTGTTTGCACCTTTG | + |
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Preference number: 5 (lower is better) Translates to: LHIQSPEFNLQHVCVFQKTIICV*LLFAPL Trigger: CAAAGGTGCAAACAACAACAACACACAGATGATAGT...TTTCTGAAACACACACACATGCTGGAGATTGAACTCAGGGCTTTGTATGTGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150633.2 |
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| CDS-3UTR CAA 90 bp | ACATCAAAGGTGGAAGGCAAAAGTCTTTTTGGTAACCTAGGCAAAGAACACAACTTGAGTCCGTTTATGTaGAAGCTCAAGAAAGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: TSKVEGKSLFGNLGKEHNLSPFM*KLKKGN Trigger: GTTTCCTTTCTTGAGCTTCAACATAAACGGACTCAA...GTTGTGTTCTTTGCCTAGGTTACCAAAAAGACTTTTGCCTTCCACCTTTGATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR CAA 90 bp | CCTGCTTTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTTTTGCACCTTTGTTATaGGTGAGTTTTAACTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: PAFSEHFSFPINESIQHLFAPLL*VSFNFP Trigger: TGGGAAGTTAAAACTCACCAATAACAAAGGTGCAAA...AAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAAAGCAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTGAACATTTCTCGTTTCCCATAAATGAATCAATCCAGCACCTTGAACGATTTGCACCTTTGTTATaGGTGAGTTTTAACTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: FSEHFSFPINESIQHLERFAPLL*VSFNFP Trigger: TGGGAAGTTAAAACTCACCAATAACAAAGGTGCAAA...TCGTTCAAGGTGCTGGATTGATTCATTTATGGGAAACGAGAAATGTTCAGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS GCA 72 bp | CGCGCCATTGGACGCGGGGTACACGGGTCCGTGGGCTaGTCCGGCCGCCGCCGGGTACTGGAAGAGCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: RAIGRGVHGSVG*SGRRRVLEERA Trigger: TGCTCGCTCTTCCAGTACCCGGCGGCGGCCGGAGCAGCCCACGGACCCGTGTACCCCGCGTCCAATGGCGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 ENSMUST00000150633.2 |
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| CDS CCA 72 bp | CACCGCTGGGGAGGGTTGGCCACCTCTTCGCTCTGTTaGGGTGAGAGGAGGCCGTTGGTCTGTGGCACGGTT | + |
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Preference number: 6 (lower is better) Translates to: HRWGGLATSSLC*GERRPLVCGTV Trigger: AACCGTGCCACAGACCAACGGCCTCCTCTCACCCCAACAGAGCGAAGAGGTGGCCAACCCTCCCCAGCGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS CCA 72 bp | GTCACAGGTTGCTGGACAGGCGTGACAAGCCACCGCTaGGGAGGGTTGGCCACCTCTTCGCTCTGTTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: VTGCWTGVTSHR*GGLATSSLCWG Trigger: ACCCCAACAGAGCGAAGAGGTGGCCAACCCTCCCCAGCGGTGGCTTGTCACGCCTGTCCAGCAACCTGTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS CAA 72 bp | CTCCCCGCCTGGCACGGGAGACTGCCCGGAAACTTCTaGGACGCTTTGTCTAAGTCCAGCCTCTGGGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: LPAWHGRLPGNF*DALSKSSLWGE Trigger: CTCGCCCCAGAGGCTGGACTTAGACAAAGCGTCCAAGAAGTTTCCGGGCAGTCTCCCGTGCCAGGCGGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS GCA 72 bp | CTGCGGGTTCTGCGCTCCCCGCCTGGCACGGGAGACTaGCCGGAAACTTCTTGGACGCTTTGTCTAAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LRVLRSPPGTGD*PETSWTLCLSP Trigger: TGGACTTAGACAAAGCGTCCAAGAAGTTTCCGGGCAGTCTCCCGTGCCAGGCGGGGAGCGCAGAACCCGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS CAA 72 bp | TGGCACGGGAGACTGCCCGGAAACTTCTTGGACGCTTaGTCTAAGTCCAGCCTCTGGGGCGAGGGGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: WHGRLPGNFLDA*SKSSLWGEGAA Trigger: TGCTGCCCCCTCGCCCCAGAGGCTGGACTTAGACAAAGCGTCCAAGAAGTTTCCGGGCAGTCTCCCGTGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS CAA 72 bp | CCATTGCTGGGGGTGCTGGGAGACAGGCGCTTTCTCTaGCAAGCGCTGTTGTACACCCCGGAGTCGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: PLLGVLGDRRFL*QALLYTPESLE Trigger: CTCCAGCGACTCCGGGGTGTACAACAGCGCTTGCAAGAGAAAGCGCCTGTCTCCCAGCACCCCCAGCAATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS GCA 72 bp | CATCTTCCTCTGATAAGCGCCACGGCCTCCCCACCCTaGCATAGCAGGGAAGGTCGGGTCAGGGTAATACCC | + |
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Preference number: 6 (lower is better) Translates to: HLPLISATASPP*HSREGRVRVIP Trigger: GGGTATTACCCTGACCCGACCTTCCCTGCTATGGCAGGGTGGGGAGGCCGTGGCGCTTATCAGAGGAAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS CAA 90 bp | TTGCTGGGGGTGCTGGGAGACAGGCGCTTTCTCTTGCAAGCGCTGTaGTACACCCCGGAGTCGCTGGAGTCTAGAGACTTGATGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: LLGVLGDRRFLLQAL*YTPESLESRDLMEG Trigger: CCCCTCCATCAAGTCTCTAGACTCCAGCGACTCCGGGGTGTACAACAGCGCTTGCAAGAGAAAGCGCCTGTCTCCCAGCACCCCCAGCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS CAA 90 bp | GGCGAGTTTCCATTGCTGGGGGTGCTGGGAGACAGGCGCTTTCTCTaGCAAGCGCTGTTGTACACCCCGGAGTCGCTGGAGTCTAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: GEFPLLGVLGDRRFL*QALLYTPESLESRD Trigger: GTCTCTAGACTCCAGCGACTCCGGGGTGTACAACAGCGCTTGCAAGAGAAAGCGCCTGTCTCCCAGCACCCCCAGCAATGGAAACTCGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS CAA 72 bp | GTGCTGGGAGACAGGCGCTTTCTCTTGCAAGCGCTGTaGTACACCCCGGAGTCGCTGGAGTCTAGAGACTTG | + |
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Preference number: 6 (lower is better) Translates to: VLGDRRFLLQAL*YTPESLESRDL Trigger: CAAGTCTCTAGACTCCAGCGACTCCGGGGTGTACAACAGCGCTTGCAAGAGAAAGCGCCTGTCTCCCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS CAA 90 bp | TCGGGCTTGAGGCAAAGTGTTGACAAAGGGCTCCGGGAAGAAGTTTaGAACGCCGTACCGACCTCCAGGGACAATCTGATGGGATCTAGG | + |
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Preference number: 6 (lower is better) Translates to: SGLRQSVDKGLREEV*NAVPTSRDNLMGSR Trigger: CCTAGATCCCATCAGATTGTCCCTGGAGGTCGGTACGGCGTTCAAAACTTCTTCCCGGAGCCCTTTGTCAACACTTTGCCTCAAGCCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
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| CDS GCA 72 bp | AAGTCCTCCACACCGTCCTCTGTCACTTCCACGATGTaGAGCCTCGGTTGGTATTTGTGCAGAGACTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: KSSTPSSVTSTM*SLGWYLCRDCN Trigger: GTTGCAGTCTCTGCACAAATACCAACCGAGGCTGCACATCGTGGAAGTGACAGAGGACGGTGTGGAGGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 ENSMUST00000150633.2 |
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| CDS CAA 72 bp | AGGCAAAGTGTTGACAAAGGGCTCCGGGAAGAAGTTTaGAACGCCGTACCGACCTCCAGGGACAATCTGATG | + |
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Preference number: 6 (lower is better) Translates to: RQSVDKGLREEV*NAVPTSRDNLM Trigger: CATCAGATTGTCCCTGGAGGTCGGTACGGCGTTCAAAACTTCTTCCCGGAGCCCTTTGTCAACACTTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS CAA 90 bp | GCCGTTGGTCTGTGGCACGGTTCTCTCACCGTTATAATATCGGGCTaGAGGCAAAGTGTTGACAAAGGGCTCCGGGAAGAAGTTTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: AVGLWHGSLTVIISG*RQSVDKGLREEVLN Trigger: GTTCAAAACTTCTTCCCGGAGCCCTTTGTCAACACTTTGCCTCAAGCCCGATATTATAACGGTGAGAGAACCGTGCCACAGACCAACGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS CAA 72 bp | CTGTGGCACGGTTCTCTCACCGTTATAATATCGGGCTaGAGGCAAAGTGTTGACAAAGGGCTCCGGGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: LWHGSLTVIISG*RQSVDKGLREE Trigger: TTCTTCCCGGAGCCCTTTGTCAACACTTTGCCTCAAGCCCGATATTATAACGGTGAGAGAACCGTGCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS TCA 72 bp | TCTCACCGTTATAATATCGGGCTTGAGGCAAAGTGTTaGCAAAGGGCTCCGGGAAGAAGTTTTGAACGCCGT | + |
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Preference number: 6 (lower is better) Translates to: SHRYNIGLEAKC*QRAPGRSFERR Trigger: ACGGCGTTCAAAACTTCTTCCCGGAGCCCTTTGTCAACACTTTGCCTCAAGCCCGATATTATAACGGTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS GCA 72 bp | GTCACTTCCACGATGTGCAGCCTCGGTTGGTATTTGTaGAGAGACTGCAACACTATCATCTGTGTGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: VTSTMCSLGWYL*RDCNTIICVLL Trigger: CAACAACACACAGATGATAGTGTTGCAGTCTCTGCACAAATACCAACCGAGGCTGCACATCGTGGAAGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 ENSMUST00000150633.2 |
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| CDS CCA 72 bp | ATGGAGTTAACCTGTCATTTTCTGAAGCCGTGTACATaGAATCGTAGTTGTCCCGGAAGCCTTTGGCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: MELTCHFLKPCT*NRSCPGSLWRR Trigger: CCTTCGCCAAAGGCTTCCGGGACAACTACGATTCCATGTACACGGCTTCAGAAAATGACAGGTTAACTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035020.15 |
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| CDS CAA 90 bp | ACACCGTCCTCTGTCACTTCCACGATGTGCAGCCTCGGTTGGTATTaGTGCAGAGACTGCAACACTATCATCTGTGTGTTGTTGTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: TPSSVTSTMCSLGWY*CRDCNTIICVLLLF Trigger: AAACAACAACAACACACAGATGATAGTGTTGCAGTCTCTGCACAAATACCAACCGAGGCTGCACATCGTGGAAGTGACAGAGGACGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 ENSMUST00000150633.2 |
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| CDS TCA 72 bp | GAACTAATCTCTTCTTTAACTTTTTCCTTGGCAAGCTaGTCTTCTGGGAAGACAGGTGGGCTCATTCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: ELISSLTFSLAS*SSGKTGGLILD Trigger: ATCCAGAATGAGCCCACCTGTCTTCCCAGAAGATCAGCTTGCCAAGGAAAAAGTTAAAGAAGAGATTAGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS CCA 72 bp | ATGGGATGTCTGCAGGGGCAAGGACTTAATACCATATaGGAGCAAGGTACTGGAAGTATATTCAGATTCATA | + |
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Preference number: 6 (lower is better) Translates to: MGCLQGQGLNTI*EQGTGSIFRFI Trigger: TATGAATCTGAATATACTTCCAGTACCTTGCTCCCATATGGTATTAAGTCCTTGCCCCTGCAGACATCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 |
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| CDS CAA 90 bp | TGGTATTTGTGCAGAGACTGCAACACTATCATCTGTGTGTTGTTGTaGTTTGCACCTTTGTTATTGGTGAGTTTTAACTTCCCAAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: WYLCRDCNTIICVLL*FAPLLLVSFNFPKE Trigger: TTCCTTTGGGAAGTTAAAACTCACCAATAACAAAGGTGCAAACAACAACAACACACAGATGATAGTGTTGCAGTCTCTGCACAAATACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 ENSMUST00000150633.2 |
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| CDS CAA 72 bp | TTGTGCAGAGACTGCAACACTATCATCTGTGTGTTGTaGTTGTTTGCACCTTTGTTATTGGTGAGTTTTAAC | + |
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Preference number: 6 (lower is better) Translates to: LCRDCNTIICVL*LFAPLLLVSFN Trigger: GTTAAAACTCACCAATAACAAAGGTGCAAACAACAACAACACACAGATGATAGTGTTGCAGTCTCTGCACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 ENSMUST00000150633.2 |
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| CDS CAA 72 bp | TATTTGTGCAGAGACTGCAACACTATCATCTGTGTGTaGTTGTTGTTTGCACCTTTGTTATTGGTGAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: YLCRDCNTIICV*LLFAPLLLVSF Trigger: AAAACTCACCAATAACAAAGGTGCAAACAACAACAACACACAGATGATAGTGTTGCAGTCTCTGCACAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035020.15 ENSMUST00000111763.8 ENSMUST00000150633.2 |
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