Pregenerated sensors for EOGT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035245Ensembl transcript IDs: ENSMUST00000054344.11, ENSMUST00000113387.8, ENSMUST00000136575.8, ENSMUST00000142116.2, ENSMUST00000142553.8, ENSMUST00000204331.3
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGAAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTaGGGCTTTTGTTTTGATTGGATAATTCACAGGTCTACCGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: GKPAAGHPVCSVPLS*GFCFDWIIHRSTVF Trigger: AAACACGGTAGACCTGTGAATTATCCAATCAAAACAAAAGCCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR TCA 90 bp | CTGGAATCCTCGGTAGTCTGTGAACACATAGGTCCCTGTGCAGCTTaGAATGAGGTAAAAGGAAGGTTTTCCAGACACAGTCTCAGATGT | + |
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Preference number: 1 (lower is better) Translates to: LESSVVCEHIGPCAA*NEVKGRFSRHSLRC Trigger: ACATCTGAGACTGTGTCTGGAAAACCTTCCTTTTACCTCATTTCAAGCTGCACAGGGACCTATGTGTTCACAGACTACCGAGGATTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR TCA 90 bp | AAGACACAAGCATCACACTGTACAATAGAACAAACCCATGGTTTCTaGCTGTTGAGCTATGTGCTTAGCAGTAAGAAACAAAGGCAGTCC | + |
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Preference number: 1 (lower is better) Translates to: KTQASHCTIEQTHGF*LLSYVLSSKKQRQS Trigger: GGACTGCCTTTGTTTCTTACTGCTAAGCACATAGCTCAACAGTCAGAAACCATGGGTTTGTTCTATTGTACAGTGTGATGCTTGTGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGCTTTTCTTACAGTAGGATATaGCAGGCTGTTCTGCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: GKPAAGHPVCSVPLSWGFSYSRI*QAVLLL Trigger: GAGGAGCAGAACAGCCTGTCATATCCTACTGTAAGA...AAAGCCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGCTTTTCTTTGTCAGGCTCTTaGTGCACGGAATCTGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: GKPAAGHPVCSVPLSWGFSLSGS*CTESGV Trigger: AACTCCAGATTCCGTGCATCAAGAGCCTGACAAAGA...AAAGCCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR GCA 90 bp | CCCTTCCTGTGGGACAGCCCCTTCTTCCCCTGCCTACCTAATATCCTGCACCCGACACCAATGGGCATCTaGCCACCTTTGAACTATAAA | + |
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Preference number: 2 (lower is better) Translates to: PFLWDSPFFPCLPNILHPTPMGI*PPLNYK Trigger: TTTATAGTTCAAAGGTGGGCAGATGCCCATTGGTGT...CGGGTGCAGGATATTAGGTAGGCAGGGGAAGAAGGGGCTGTCCCACAGGAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGGACAGCCCCTTCTTCCCCTGCCTACCTAATATCCTGCACCCGGAACAGCTTCATGTGGCTACTTaGCAGTGTTTTACAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: LWDSPFFPCLPNILHPEQLHVAT*QCFTET Trigger: AGTCTCTGTAAAACACTGCCAAGTAGCCACATGAAG...CTGTTCCGGGTGCAGGATATTAGGTAGGCAGGGGAAGAAGGGGCTGTCCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGGAAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGCATCTCCTGGAGGTGTaGTTTCATATACAAAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: PGEACCWASCLLSATFLGHLLEV*FHIQKV Trigger: TACTTTTTGTATATGAAAGCACACCTCCAGGAGATG...CCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGCTTTAGTTCAAGGTCAGCCTaGGCTATATTCAGAAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: GKPAAGHPVCSVPLSWGFSSRSA*AIFRSK Trigger: TTTACTTCTGAATATAGCTCAGGCTGACCTTGAACT...AAAGCCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGGACAGCCCCTTCTTCCCCTGCCTACCTAATATCCTGCACCCGGAACAGGGCTTTTGTTTTGATTaGATAATTCACAGGTCTACC | + |
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Preference number: 2 (lower is better) Translates to: LWDSPFFPCLPNILHPEQGFCFD*IIHRST Trigger: GGTAGACCTGTGAATTATCCAATCAAAACAAAAGCC...CTGTTCCGGGTGCAGGATATTAGGTAGGCAGGGGAAGAAGGGGCTGTCCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR CCA 90 bp | TTAGCAGTAAGAAACAAAGGCAGTCCAGGGGAAGCCTGCTGCTGGGCATCCTGTTGTCTTCTCTTCATGTaGCTACTTGGCAGTGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: LAVRNKGSPGEACCWASCCLLFM*LLGSVL Trigger: TAAAACACTGCCAAGTAGCCACATGAAGAGAAGACA...ACAGGATGCCCAGCAGCAGGCTTCCCCTGGACTGCCTTTGTTTCTTACTGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR GCA 90 bp | CAACACTCTTGGAAACAACCTCAACACTTCTATAGCTCATCATGTTTCTTCTTAGGCCACTGTGGGTGCTaGAGTACATGCTCTGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: QHSWKQPQHFYSSSCFFLGHCGC*STCSAA Trigger: GGCTGCAGAGCATGTACTGCAGCACCCACAGTGGCC...TAAGAAGAAACATGATGAGCTATAGAAGTGTTGAGGTTGTTTCCAAGAGTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113387.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGGTGTCAACACTCTTGGAAACAACCTCAACACTTCTATAGCTCATCATGTTAATGGCCACTGTGGGTaGTGCAGTACATGCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: EGVNTLGNNLNTSIAHHVNGHCG*CSTCSA Trigger: TGCAGAGCATGTACTGCAGCACCCACAGTGGCCATT...AACATGATGAGCTATAGAAGTGTTGAGGTTGTTTCCAAGAGTGTTGACACCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113387.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCCCAGACCCTACAACCATATTTATGAACATACAATGGCAAATAACAACAGGCACACCTGTAAGGTaGGCACTCAGTTGGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: MCPDPTTIFMNIQWQITTGTPVR*ALSWLR Trigger: CCTGAGCCAACTGAGTGCTCACCTTACAGGTGTGCC...TGTTGTTATTTGCCATTGTATGTTCATAAATATGGTTGTAGGGTCTGGGCACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR TCA 90 bp | GAGGGTGTCAACACTCTTGGAAACAACCTCAACACTTCTATAGCTCATCATGTTACATGCTCTGCAGCCTaGAGGACAAGGTACATGAAT | + |
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Preference number: 2 (lower is better) Translates to: EGVNTLGNNLNTSIAHHVTCSAA*RTRYMN Trigger: ATTCATGTACCTTGTCCTTCAGGCTGCAGAGCATGT...AACATGATGAGCTATAGAAGTGTTGAGGTTGTTTCCAAGAGTGTTGACACCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113387.8 |
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| 3UTR-3UTR TCA 90 bp | ACATTACAGTTAACAAACACATATATCAAGTCTGAAGCCACCGATGTTGACAACGTGAGTCTATGGCTGTaGGAGGGTGTCAACACTCTT | + |
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Preference number: 2 (lower is better) Translates to: TLQLTNTYIKSEATDVDNVSLWL*EGVNTL Trigger: AAGAGTGTTGACACCCTCTCACAGCCATAGACTCAC...GTTGTCAACATCGGTGGCTTCAGACTTGATATATGTGTTTGTTAACTGTAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR GCA 90 bp | CAAGGTCAGCCTGAGCTATATTCAGAAGTAAAACGTCATGTTTCCTCTTACAGTTATGACAGGCTGTTCTaGTCCTCTGATTGTGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: QGQPELYSEVKRHVSSYSYDRLF*SSDCES Trigger: AGACTCACAATCAGAGGAGCAGAACAGCCTGTCATA...ACTGTAAGAGGAAACATGACGTTTTACTTCTGAATATAGCTCAGGCTGACCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR TCA 90 bp | CACTCTTGGAAACAACCTCAACACTTCTATAGCTCATCATGTTTCTTCTTAAATGTGAGTCTATGGCTGTaGGAGGGTGTCAACACTCTT | + |
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Preference number: 2 (lower is better) Translates to: HSWKQPQHFYSSSCFFLNVSLWL*EGVNTL Trigger: AAGAGTGTTGACACCCTCTCACAGCCATAGACTCAC...ATTTAAGAAGAAACATGATGAGCTATAGAAGTGTTGAGGTTGTTTCCAAGAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113387.8 |
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| 3UTR-3UTR GCA 90 bp | CACTCTTGGAAACAACCTCAACACTTCTATAGCTCATCATGTTTCTTCTTAAATCTGCAGTACATGCTCTaGAGCCTGAAGGACAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: HSWKQPQHFYSSSCFFLNLQYML*SLKDKV Trigger: TACCTTGTCCTTCAGGCTGCAGAGCATGTACTGCAG...ATTTAAGAAGAAACATGATGAGCTATAGAAGTGTTGAGGTTGTTTCCAAGAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113387.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCCATATCTACATTTTAGATTTTACAACAATCTGCAGATCTTCTGCTCCCGAAACTAAGACTTCATaGCAAGTCAGCATGAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: KGHIYILDFTTICRSSAPETKTS*QVSMKG Trigger: ACCCTTCATGCTGACTTGGCATGAAGTCTTAGTTTC...GGGAGCAGAAGATCTGCAGATTGTTGTAAAATCTAAAATGTAGATATGGCCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCCCAGACCCTACAACCATATTTATGAACATACAATGGCAAATAACAACAAGACTTAGCATCTCCTaGAGGTGTGCTTTCATATAC | + |
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Preference number: 2 (lower is better) Translates to: MCPDPTTIFMNIQWQITTRLSIS*RCAFIY Trigger: GTATATGAAAGCACACCTCCAGGAGATGCTAAGTCT...TGTTGTTATTTGCCATTGTATGTTCATAAATATGGTTGTAGGGTCTGGGCACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR CAA 90 bp | CCAGGGGAAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGAAGGTGAGCACTCAGTaGGCTCAGGCAAGAGGATCA | + |
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Preference number: 3 (lower is better) Translates to: PGEACCWASCLLSATFLGKVSTQ*AQARGS Trigger: TGATCCTCTTGCCTGAGCCAACTGAGTGCTCACCTT...CCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR CCA 72 bp | GTAAGAAACAAAGGCAGTCCAGGGGAAGCCTGCTGCTaGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: VRNKGSPGEACC*ASCLLSATFLG Trigger: CCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCCCTGGACTGCCTTTGTTTCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR GCA 72 bp | GCAGTAAGAAACAAAGGCAGTCCAGGGGAAGCCTGCTaGTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: AVRNKGSPGEAC*WASCLLSATFL Trigger: CAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCCCTGGACTGCCTTTGTTTCTTACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR GCA 72 bp | TTAGCAGTAAGAAACAAAGGCAGTCCAGGGGAAGCCTaGTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTC | + |
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Preference number: 3 (lower is better) Translates to: LAVRNKGSPGEA*CWASCLLSATF Trigger: GAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCCCTGGACTGCCTTTGTTTCTTACTGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR CAA 90 bp | CTGTGGGACAGCCCCTTCTTCCCCTGCCTACCTAATATCCTGCACCCGGAACAGGGCATCTGCCCACCTTaGAACTATAAAAGTAACCTT | + |
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Preference number: 3 (lower is better) Translates to: LWDSPFFPCLPNILHPEQGICPP*NYKSNL Trigger: AAGGTTACTTTTATAGTTCAAAGGTGGGCAGATGCC...CTGTTCCGGGTGCAGGATATTAGGTAGGCAGGGGAAGAAGGGGCTGTCCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR TCA 72 bp | GGCTGTTCTGCTCCTCTGATTGTGAGTCTATGGCTGTaGGAGGGTGTCAACACTCTTGGAAACAACCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: GCSAPLIVSLWL*EGVNTLGNNLN Trigger: GTTGAGGTTGTTTCCAAGAGTGTTGACACCCTCTCACAGCCATAGACTCACAATCAGAGGAGCAGAACAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR CCA 72 bp | GCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTaGGGCTTTTGTTTTGATTGGATAATTCACAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: AAGHPVCSVPLS*GFCFDWIIHRS Trigger: AGACCTGTGAATTATCCAATCAAAACAAAAGCCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR TCA 72 bp | GGCTCAGGCAAGAGGATCACTAGTTCAAGGTCAGCCTaGGCTATATTCAGAAGTAAAACGTCATGTTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: GSGKRITSSRSA*AIFRSKTSCFL Trigger: GAGGAAACATGACGTTTTACTTCTGAATATAGCTCAGGCTGACCTTGAACTAGTGATCCTCTTGCCTGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR TCA 72 bp | CTGAAGCGTCAGTGGAGATGGTACTACAGAATGTTCTaGCAGGCTCTTATCAACACTGCCATTACATTTGGG | + |
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Preference number: 3 (lower is better) Translates to: LKRQWRWYYRMF*QALINTAITFG Trigger: CCCAAATGTAATGGCAGTGTTGATAAGAGCCTGTCAGAACATTCTGTAGTACCATCTCCACTGACGCTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR TCA 72 bp | TCGGTAGTCTGTGAACACATAGGTCCCTGTGCAGCTTaGAATGAGGTAAAAGGAAGGTTTTCCAGACACAGT | + |
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Preference number: 3 (lower is better) Translates to: SVVCEHIGPCAA*NEVKGRFSRHS Trigger: ACTGTGTCTGGAAAACCTTCCTTTTACCTCATTTCAAGCTGCACAGGGACCTATGTGTTCACAGACTACCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR CAA 90 bp | ATGTGCCCAGACCCTACAACCATATTTATGAACATACAATGGCAAATAACAACAAGGGTGTCAACACTCTaGGAAACAACCTCAACACTT | + |
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Preference number: 3 (lower is better) Translates to: MCPDPTTIFMNIQWQITTRVSTL*ETTSTL Trigger: AAGTGTTGAGGTTGTTTCCAAGAGTGTTGACACCCT...TGTTGTTATTTGCCATTGTATGTTCATAAATATGGTTGTAGGGTCTGGGCACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR-3UTR CAA 90 bp | CAACACTCTTGGAAACAACCTCAACACTTCTATAGCTCATCATGTTTCTTCTTAAGGGTGTCAACACTCTaGGAAACAACCTCAACACTT | + |
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Preference number: 3 (lower is better) Translates to: QHSWKQPQHFYSSSCFFLRVSTL*ETTSTL Trigger: AAGTGTTGAGGTTGTTTCCAAGAGTGTTGACACCCT...TAAGAAGAAACATGATGAGCTATAGAAGTGTTGAGGTTGTTTCCAAGAGTGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113387.8 |
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| 3UTR TCA 72 bp | GCATCACACTGTACAATAGAACAAACCCATGGTTTCTaGCTGTTGAGCTATGTGCTTAGCAGTAAGAAACAA | + |
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Preference number: 3 (lower is better) Translates to: ASHCTIEQTHGF*LLSYVLSSKKQ Trigger: TTGTTTCTTACTGCTAAGCACATAGCTCAACAGTCAGAAACCATGGGTTTGTTCTATTGTACAGTGTGATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR CCA 72 bp | GATGAGTTTATCCAAATAGATGAAGCCATGACACTCTaGAATCAAGATCACATTACAGTTAACAAACACATA | + |
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Preference number: 3 (lower is better) Translates to: DEFIQIDEAMTL*NQDHITVNKHI Trigger: TATGTGTTTGTTAACTGTAATGTGATCTTGATTCCAGAGTGTCATGGCTTCATCTATTTGGATAAACTCATC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS-3UTR TCA 90 bp | CTGTGGGACAGCCCCTTCTTCCCCTGCCTACCTAATATCCTGCACCCGGAACAGGAACATGTCCTGGGCTaGCTCCAGAGTATCGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LWDSPFFPCLPNILHPEQEHVLG*LQSIGP Trigger: TGGACCGATACTCTGGAGTCAGCCCAGGACATGTTC...CTGTTCCGGGTGCAGGATATTAGGTAGGCAGGGGAAGAAGGGGCTGTCCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS-3UTR GCA 90 bp | CCAGGGGAAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGAATGGCCACTGTGGGTaGTGCAGTACATGCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PGEACCWASCLLSATFLGNGHCG*CSTCSA Trigger: TGCAGAGCATGTACTGCAGCACCCACAGTGGCCATT...CCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS-3UTR GCA 90 bp | GGGAAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGCTTTAGTGGGAATCCTCCCTaGACACAGAGGCAACATGCC | + |
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Preference number: 4 (lower is better) Translates to: GKPAAGHPVCSVPLSWGFSGNPP*TQRQHA Trigger: GGCATGTTGCCTCTGTGTGCAGGGAGGATTCCCACT...AAAGCCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS-3UTR GCA 90 bp | CAGGGGAAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGCCTGCAGTACATGCTCTaGAGCCTGAAGGACAAGGTA | + |
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Preference number: 4 (lower is better) Translates to: QGKPAAGHPVCSVPLSWGLQYML*SLKDKV Trigger: TACCTTGTCCTTCAGGCTGCAGAGCATGTACTGCAG...GCCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS-3UTR GCA 90 bp | GATGTTGACAACTTTGCATCCCCACAGGAGAGCTCTGCCACACCAATGGGCATCGGCCACTGTGGGTGCTaGAGTACATGCTCTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: DVDNFASPQESSATPMGIGHCGC*STCSAA Trigger: GGCTGCAGAGCATGTACTGCAGCACCCACAGTGGCC...GATGCCCATTGGTGTGGCAGAGCTCTCCTGTGGGGATGCAAAGTTGTCAACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS-3UTR TCA 90 bp | CCCTTCCTGTGGGACAGCCCCTTCTTCCCCTGCCTACCTAATATCCTGCACCCGACATGCTCTGCAGCCTaGAGGACAAGGTACATGAAT | + |
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Preference number: 4 (lower is better) Translates to: PFLWDSPFFPCLPNILHPTCSAA*RTRYMN Trigger: ATTCATGTACCTTGTCCTTCAGGCTGCAGAGCATGT...CGGGTGCAGGATATTAGGTAGGCAGGGGAAGAAGGGGCTGTCCCACAGGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS-3UTR GCA 90 bp | GGGAAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGCTTTCCAAGTCGACATAGCTaGAAACGGGGGAACCGAATC | + |
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Preference number: 4 (lower is better) Translates to: GKPAAGHPVCSVPLSWGFPSRHS*KRGNRI Trigger: GATTCGGTTCCCCCGTTTGCAGCTATGTCGACTTGG...AAAGCCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS-3UTR GCA 90 bp | CCCTTCCTGTGGGACAGCCCCTTCTTCCCCTGCCTACCTAATATCCTGCACCCGTATCCAAAGTCAGCTTaGCTCCAGAACATGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PFLWDSPFFPCLPNILHPYPKSA*LQNMSW Trigger: CCAGGACATGTTCTGGAGGCAAGCTGACTTTGGATA...CGGGTGCAGGATATTAGGTAGGCAGGGGAAGAAGGGGCTGTCCCACAGGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS-3UTR GCA 90 bp | CTGTGGGACAGCCCCTTCTTCCCCTGCCTACCTAATATCCTGCACCCGGAACAGAGCCTATGCAGCACATaGTGGGAGAAGGCTCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: LWDSPFFPCLPNILHPEQSLCST*WEKALN Trigger: ATTCAGAGCCTTCTCCCAGCATGTGCTGCATAGGCT...CTGTTCCGGGTGCAGGATATTAGGTAGGCAGGGGAAGAAGGGGCTGTCCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| 3UTR CAA 72 bp | GGCATGGTGGGGCACACCTGTAAGGTGAGCACTCAGTaGGCTCAGGCAAGAGGATCACTAGTTCAAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GMVGHTCKVSTQ*AQARGSLVQGQ Trigger: CTGACCTTGAACTAGTGATCCTCTTGCCTGAGCCAACTGAGTGCTCACCTTACAGGTGTGCCCCACCATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS-3UTR TCA 90 bp | CCAGGGGAAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGCTCAGTGGGACTTCATaGAGCAATACTCCAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: PGEACCWASCLLSATFLGLSGTS*SNTPKT Trigger: TGTCTTTGGAGTATTGCTTCATGAAGTCCCACTGAG...CCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS-3UTR TCA 90 bp | CAGGGGAAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGCAATAATCCTGTATTCTaGCAGCCAGAGATCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: QGKPAAGHPVCSVPLSWGNNPVF*QPEIRG Trigger: GCCTCTGATCTCTGGCTGTCAGAATACAGGATTATT...GCCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS-3UTR TCA 90 bp | GATGTTGACAACTTTGCATCCCCACAGGAGAGCTCTGCCACACCAATGGGCATCTGTAGTGGATGCCTCTaGGCCTGGCCAGGTCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DVDNFASPQESSATPMGICSGCL*AWPGLS Trigger: ACTTAGACCTGGCCAGGCTCAGAGGCATCCACTACA...GATGCCCATTGGTGTGGCAGAGCTCTCCTGTGGGGATGCAAAGTTGTCAACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CCA 90 bp | GGGAAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGCTTTGTCCTGGCCACTCAGTaGGACTTCATGAAGCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: GKPAAGHPVCSVPLSWGFVLATQ*DFMKQY Trigger: GTATTGCTTCATGAAGTCCCACTGAGTGGCCAGGAC...AAAGCCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR TCA 90 bp | CCCTTCCTGTGGGACAGCCCCTTCTTCCCCTGCCTACCTAATATCCTGCACCCGTCAGACACCAGTGCATaGCTGTCAAGTTTACAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PFLWDSPFFPCLPNILHPSDTSA*LSSLQY Trigger: ATACTGTAAACTTGACAGTCATGCACTGGTGTCTGA...CGGGTGCAGGATATTAGGTAGGCAGGGGAAGAAGGGGCTGTCCCACAGGAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR GCA 90 bp | GATGTTGACAACTTTGCATCCCCACAGGAGAGCTCTGCCACACCAATGGGCATCAGGGGACTTTTACGCTaGCCTTCAGACACCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DVDNFASPQESSATPMGIRGLLR*PSDTSA Trigger: TGCACTGGTGTCTGAAGGGCAGCGTAAAAGTCCCCT...GATGCCCATTGGTGTGGCAGAGCTCTCCTGTGGGGATGCAAAGTTGTCAACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR GCA 90 bp | GGGAAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGCTTTGTAAGGCCAGCTCCATaGATGCCAATAAATATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKPAAGHPVCSVPLSWGFVRPAP*MPINMS Trigger: GGACATATTTATTGGCATGCATGGAGCTGGCCTTAC...AAAGCCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CCA 90 bp | TTAGCAGTAAGAAACAAAGGCAGTCCAGGGGAAGCCTGCTGCTGGGCATCCTGTCATACCCGTAAGTGCTaGTGTCCCACATCACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LAVRNKGSPGEACCWASCHTRKC*CPTSRC Trigger: ACATCGTGATGTGGGACACCAGCACTTACGGGTATG...ACAGGATGCCCAGCAGCAGGCTTCCCCTGGACTGCCTTTGTTTCTTACTGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR GCA 90 bp | GATGTTGACAACTTTGCATCCCCACAGGAGAGCTCTGCCACACCAATGGGCATCCACACAGAGGCAACATaGCTGTTATTGTGCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DVDNFASPQESSATPMGIHTEAT*LLLCKK Trigger: CTTCTTGCACAATAACAGGCATGTTGCCTCTGTGTG...GATGCCCATTGGTGTGGCAGAGCTCTCCTGTGGGGATGCAAAGTTGTCAACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR GCA 90 bp | TTAGCAGTAAGAAACAAAGGCAGTCCAGGGGAAGCCTGCTGCTGGGCATCCTGTGAATCTAAACTCTGGTaGGCAGGACTTCTCATAACC | + |
|
Preference number: 4 (lower is better) Translates to: LAVRNKGSPGEACCWASCESKLW*AGLLIT Trigger: GGTTATGAGAAGTCCTGCGCACCAGAGTTTAGATTC...ACAGGATGCCCAGCAGCAGGCTTCCCCTGGACTGCCTTTGTTTCTTACTGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR GCA 90 bp | GATGTTGACAACTTTGCATCCCCACAGGAGAGCTCTGCCACACCAATGGGCATCGTATTCTGTGCTGCGTaGAAGAATGGTAACTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DVDNFASPQESSATPMGIVFCAA*KNGNSN Trigger: GTTCGAGTTACCATTCTTGCACGCAGCACAGAATAC...GATGCCCATTGGTGTGGCAGAGCTCTCCTGTGGGGATGCAAAGTTGTCAACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CCA 90 bp | CTGTGGGACAGCCCCTTCTTCCCCTGCCTACCTAATATCCTGCACCCGGAACAGAAGTCACAGAAGTGGTaGTACATATTAATACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LWDSPFFPCLPNILHPEQKSQKW*YILIPA Trigger: TGCAGGTATTAATATGTACCACCACTTCTGTGACTT...CTGTTCCGGGTGCAGGATATTAGGTAGGCAGGGGAAGAAGGGGCTGTCCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CCA 90 bp | AAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGCTTTTGTATGTTTCTTCTTAAATaGCCACTGTGGGTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPAAGHPVCSVPLSWGFCMFLLK*PLWVLQ Trigger: CTGCAGCACCCACAGTGGCCATTTAAGAAGAAACAT...ACAAAAGCCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| 3UTR CAA 72 bp | CATATATCAAGTCTGAAGCCACCGATGTTGACAACTTaGCATCCCCACAGGAGAGCTCTGCCACACCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: HISSLKPPMLTT*HPHRRALPHQW Trigger: CCATTGGTGTGGCAGAGCTCTCCTGTGGGGATGCAAAGTTGTCAACATCGGTGGCTTCAGACTTGATATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR TCA 90 bp | CTGTTCTGCTCCTCTGATTGTGAGTCTATGGCTGTGAGAGGGTGTCAACACTCTTGCGTGATCCTGAGCTaGTCTAAAAACCCGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFCSSDCESMAVRGCQHSCVILS*SKNPSS Trigger: AGAACTCGGGTTTTTAGATCAGCTCAGGATCACGCA...AGAGTGTTGACACCCTCTCACAGCCATAGACTCACAATCAGAGGAGCAGAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CCA 90 bp | GATGTTGACAACTTTGCATCCCCACAGGAGAGCTCTGCCACACCAATGGGCATCCCCGGACTTCAAATGTaGATACTGTTTTCAGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DVDNFASPQESSATPMGIPGLQM*ILFSVH Trigger: ATGCACTGAAAACAGTATCCACATTTGAAGTCCGGG...GATGCCCATTGGTGTGGCAGAGCTCTCCTGTGGGGATGCAAAGTTGTCAACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR TCA 90 bp | CTGTTCTGCTCCTCTGATTGTGAGTCTATGGCTGTGAGAGGGTGTCAACACTCTTGTCGTGGTTTCTCTTaGTGTTTCTTAAGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFCSSDCESMAVRGCQHSCRGFS*CFLSPG Trigger: ACCTGGACTTAAGAAACATCAAGAGAAACCACGACA...AGAGTGTTGACACCCTCTCACAGCCATAGACTCACAATCAGAGGAGCAGAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CCA 90 bp | TTAGCAGTAAGAAACAAAGGCAGTCCAGGGGAAGCCTGCTGCTGGGCATCCTGTTCCTTGAATCTGTCGTaGTTTCTCTTGATGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAVRNKGSPGEACCWASCSLNLS*FLLMFL Trigger: AAGAAACATCAAGAGAAACCACGACAGATTCAAGGA...ACAGGATGCCCAGCAGCAGGCTTCCCCTGGACTGCCTTTGTTTCTTACTGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR TCA 90 bp | CTGTTCTGCTCCTCTGATTGTGAGTCTATGGCTGTGAGAGGGTGTCAACACTCTCCAATTTCACCACCCTaGAGAAAATCTTCCTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFCSSDCESMAVRGCQHSPISPP*RKSSLN Trigger: ATTCAAGGAAGATTTTCTTCAGGGTGGTGAAATTGG...AGAGTGTTGACACCCTCTCACAGCCATAGACTCACAATCAGAGGAGCAGAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR GCA 90 bp | ACAGAGACTAGGGTTACTTCCATTCTGCCAGAGGTAGATACACACAGCCGTGTGGTCATAGTCAGTAAATaGTTTCCAGGTATCGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TETRVTSILPEVDTHSRVVIVSK*FPGIGE Trigger: TTCTCCGATACCTGGAAAGCATTTACTGACTATGAC...CACACGGCTGTGTGTATCTACCTCTGGCAGAATGGAAGTAACCCTAGTCTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CCA 90 bp | GGGTGTCAACACTCTTGGAAACAACCTCAACACTTCTATAGCTCATCATGTTTCGTCCTGGCCACTCAGTaGGACTTCATGAAGCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: GCQHSWKQPQHFYSSSCFVLATQ*DFMKQY Trigger: GTATTGCTTCATGAAGTCCCACTGAGTGGCCAGGAC...GAAACATGATGAGCTATAGAAGTGTTGAGGTTGTTTCCAAGAGTGTTGACACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113387.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGTCAGCCTGAGCTATATTCAGAAGTAAAACGTCATGTTTCCTCTTACAGTCTCCAGAACATGTCCTaGGCTGACTCCAGAGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: QGQPELYSEVKRHVSSYSLQNMS*ADSRVS Trigger: CGATACTCTGGAGTCAGCCCAGGACATGTTCTGGAG...ACTGTAAGAGGAAACATGACGTTTTACTTCTGAATATAGCTCAGGCTGACCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR TCA 90 bp | ACAGAGACTAGGGTTACTTCCATTCTGCCAGAGGTAGATACACACAGCCGTGTGGAAGGACAAGGTACATaGATTCTTCTACATCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TETRVTSILPEVDTHSRVEGQGT*ILLHQK Trigger: CTTTTGATGTAGAAGAATTCATGTACCTTGTCCTTC...CACACGGCTGTGTGTATCTACCTCTGGCAGAATGGAAGTAACCCTAGTCTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CCA 90 bp | ACAGAGACTAGGGTTACTTCCATTCTGCCAGAGGTAGATACACACAGCCGTGTGAGGAAGTCACAGAAGTaGTGGTACATATTAATACCT | + |
|
Preference number: 4 (lower is better) Translates to: TETRVTSILPEVDTHSRVRKSQK*WYILIP Trigger: AGGTATTAATATGTACCACCACTTCTGTGACTTCCT...CACACGGCTGTGTGTATCTACCTCTGGCAGAATGGAAGTAACCCTAGTCTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CCA 90 bp | CAAGGTCAGCCTGAGCTATATTCAGAAGTAAAACGTCATGTTTCCTCTTACAGTGGAAGGAAAAGTAAGTaGGTAAGGCCAGCTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: QGQPELYSEVKRHVSSYSGRKSK*VRPAPC Trigger: GCATGGAGCTGGCCTTACCCACTTACTTTTCCTTCC...ACTGTAAGAGGAAACATGACGTTTTACTTCTGAATATAGCTCAGGCTGACCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR TCA 90 bp | GAGGGTGTCAACACTCTTGGAAACAACCTCAACACTTCTATAGCTCATCATGTTCTCAGTGGGACTTCATaGAGCAATACTCCAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: EGVNTLGNNLNTSIAHHVLSGTS*SNTPKT Trigger: TGTCTTTGGAGTATTGCTTCATGAAGTCCCACTGAG...AACATGATGAGCTATAGAAGTGTTGAGGTTGTTTCCAAGAGTGTTGACACCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113387.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGCCCAGACCCTACAACCATATTTATGAACATACAATGGCAAATAACAACATCCTTGGGTCCCTCTTaGGTGATGTTCAGCCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: MCPDPTTIFMNIQWQITTSLGPS*VMFSLC Trigger: GCATAGGCTGAACATCACTCAAGAGGGACCCAAGGA...TGTTGTTATTTGCCATTGTATGTTCATAAATATGGTTGTAGGGTCTGGGCACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CCA 90 bp | AAGGGCCATATCTACATTTTAGATTTTACAACAATCTGCAGATCTTCTGCTCCCTTCTTATATGGACAGTaGGAATCCTCCCTGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: KGHIYILDFTTICRSSAPFLYGQ*ESSLHT Trigger: TGTGTGCAGGGAGGATTCCCACTGTCCATATAAGAA...GGGAGCAGAAGATCTGCAGATTGTTGTAAAATCTAAAATGTAGATATGGCCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CCA 90 bp | ATGTGCCCAGACCCTACAACCATATTTATGAACATACAATGGCAAATAACAACACTTGCTCTCTCTGGCTaGCAGATCGTTCTTATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MCPDPTTIFMNIQWQITTLALSG*QIVLIS Trigger: AGAGATAAGAACGATCTGCCAGCCAGAGAGAGCAAG...TGTTGTTATTTGCCATTGTATGTTCATAAATATGGTTGTAGGGTCTGGGCACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR GCA 90 bp | AAGGGCCATATCTACATTTTAGATTTTACAACAATCTGCAGATCTTCTGCTCCCGGATACTGTTTTCAGTaGATTTACCAGCTCGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KGHIYILDFTTICRSSAPGYCFQ*IYQLVL Trigger: CAAGACGAGCTGGTAAATGCACTGAAAACAGTATCC...GGGAGCAGAAGATCTGCAGATTGTTGTAAAATCTAAAATGTAGATATGGCCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS CCA 90 bp | TATTGTGCAAGAAGAAGGGAATGTGCTCCGCAGGGAGGCGGAGGCTaGAGTAGTCATACAGGGCCTTGCCAGGCGCATCGTCAGCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YCARRRECAPQGGGG*SSHTGPCQAHRQPQ Trigger: CTGAGGCTGACGATGCGCCTGGCAAGGCCCTGTATGACTACTCCAGCCTCCGCCTCCCTGCGGAGCACATTCCCTTCTTCTTGCACAATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054344.11 ENSMUST00000136575.8 ENSMUST00000142553.8 ENSMUST00000204331.3 |
||
| CDS-3UTR CAA 90 bp | CAGGGGAAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGCATCCTTGGGTCCCTCTaGAGTGATGTTCAGCCTATG | + |
|
Preference number: 5 (lower is better) Translates to: QGKPAAGHPVCSVPLSWGILGSL*SDVQPM Trigger: CATAGGCTGAACATCACTCAAGAGGGACCCAAGGAT...GCCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTTCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS TCA 90 bp | GGTGACCCTTATCCTGAGGAAATACTTTGCTGGGCTTCCGCCAGGTaGTGTAGTGGATGCCTCAGAATGAGCCTTGTCCTGGCCACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GDPYPEEILCWASAR*CSGCLRMSLVLATQ Trigger: CTGAGTGGCCAGGACAAGGCTCATTCTGAGGCATCCACTACATCACCTGGCGGAAGCCCAGCAAAGTATTTCCTCAGGATAAGGGTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113387.8 |
||
| CDS GCA 90 bp | GTTCTTATCTCTCCCAGTCGCTCTCGCGCATATCCAAAGTCAGCTTaGCTCCAGAACATGTCCTGGGCTGACTCCAGAGTATCGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLISPSRSRAYPKSA*LQNMSWADSRVSVH Trigger: ATGGACCGATACTCTGGAGTCAGCCCAGGACATGTTCTGGAGGCAAGCTGACTTTGGATATGCGCGAGAGCGACTGGGAGAGATAAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054344.11 ENSMUST00000136575.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCTGCTGCTGGGCATCCTGTTTGCTCAGTGCCACTTTCTTGGGGCTTTTGTCGCTCATCTTCACAGTaGTACAGCTCGAACACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KPAAGHPVCSVPLSWGFCRSSSQ*YSSNTA Trigger: TGCTGTGTTCGAGCTGTACAACTGTGAAGATGAGCG...ACAAAAGCCCCAAGAAAGTGGCACTGAGCAAACAGGATGCCCAGCAGCAGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS GCA 90 bp | TTCTTATATGGACAGTGGGAATCCTCCCTGCACACAGAGGCAACATaGCTGTTATTGTGCAAGAAGAAGGGAATGTGCTCCGCAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLYGQWESSLHTEAT*LLLCKKKGMCSAGR Trigger: CCTCCCTGCGGAGCACATTCCCTTCTTCTTGCACAATAACAGGCATGTTGCCTCTGTGTGCAGGGAGGATTCCCACTGTCCATATAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054344.11 ENSMUST00000136575.8 ENSMUST00000142553.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGACTAGGGTTACTTCCATTCTGCCAGAGGTAGATACACACAGCCGTGTGGGTGTTCTCCCAGAGTaGGATGGTGACCCTTATCCT | + |
|
Preference number: 5 (lower is better) Translates to: TETRVTSILPEVDTHSRVGVLPE*DGDPYP Trigger: AGGATAAGGGTCACCATCCAACTCTGGGAGAACACC...CACACGGCTGTGTGTATCTACCTCTGGCAGAATGGAAGTAACCCTAGTCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS TCA 90 bp | ACCAGTAGCTCTACAATACTGAAGGTAACGGGAGCAAACCAGACTTaGGTCGCTTGCTCTCTCTGGCTGGCAGATCGTTCTTATCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSSSTILKVTGANQT*VACSLWLADRSYLS Trigger: GGAGAGATAAGAACGATCTGCCAGCCAGAGAGAGCAAGCGACTCAAGTCTGGTTTGCTCCCGTTACCTTCAGTATTGTAGAGCTACTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS GCA 90 bp | TACCAGCTCGTCTTGGTTCAGGATTTTCCGGTATTCTGTGCTGCGTaGAAGAATGGTAACTCGAACTTTGCCATCCTTGGGTCCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YQLVLVQDFPVFCAA*KNGNSNFAILGSLL Trigger: CAAGAGGGACCCAAGGATGGCAAAGTTCGAGTTACCATTCTTGCACGCAGCACAGAATACCGGAAAATCCTGAACCAAGACGAGCTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS CCA 90 bp | TTGTACAGCTCGAACACAGCAGCCCAGTCCGGAAGGAAAAGTAAGTaGGTAAGGCCAGCTCCATGCATGCCAATAAATATGTCCGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LYSSNTAAQSGRKSK*VRPAPCMPINMSVL Trigger: CAACACGGACATATTTATTGGCATGCATGGAGCTGGCCTTACCCACTTACTTTTCCTTCCGGACTGGGCTGCTGTGTTCGAGCTGTACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CAA 90 bp | GATGTTGACAACTTTGCATCCCCACAGGAGAGCTCTGCCACACCAATGGGCATCGCAACATGCCTGTTATaGTGCAAGAAGAAGGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: DVDNFASPQESSATPMGIATCLL*CKKKGM Trigger: CATTCCCTTCTTCTTGCACAATAACAGGCATGTTGC...GATGCCCATTGGTGTGGCAGAGCTCTCCTGTGGGGATGCAAAGTTGTCAACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS GCA 90 bp | AAACCAAGACTGCAGGGGACTTTTACGCTGCCCTTCAGACACCAGTaGATGACTGTCAAGTTTACAGTATCCACCAATTTCACCACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KPRLQGTFTLPFRHQ*MTVKFTVSTNFTTL Trigger: CAGGGTGGTGAAATTGGTGGATACTGTAAACTTGACAGTCATGCACTGGTGTCTGAAGGGCAGCGTAAAAGTCCCCTGCAGTCTTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CAA 90 bp | ACAGAGACTAGGGTTACTTCCATTCTGCCAGAGGTAGATACACACAGCCGTGTGCTGTCGTGGTTTCTCTaGATGTTTCTTAAGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TETRVTSILPEVDTHSRVLSWFL*MFLKSR Trigger: CCTGGACTTAAGAAACATCAAGAGAAACCACGACAG...CACACGGCTGTGTGTATCTACCTCTGGCAGAATGGAAGTAACCCTAGTCTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CAA 90 bp | AAGGGCCATATCTACATTTTAGATTTTACAACAATCTGCAGATCTTCTGCTCCCCCAGACTTGAGTCGCTaGCTCTCTCTGGCTGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KGHIYILDFTTICRSSAPPDLSR*LSLAGR Trigger: TCTGCCAGCCAGAGAGAGCAAGCGACTCAAGTCTGG...GGGAGCAGAAGATCTGCAGATTGTTGTAAAATCTAAAATGTAGATATGGCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CAA 90 bp | GGGTGTCAACACTCTTGGAAACAACCTCAACACTTCTATAGCTCATCATGTTTCGGTGTTCTCCCAGAGTaGGATGGTGACCCTTATCCT | + |
|
Preference number: 5 (lower is better) Translates to: GCQHSWKQPQHFYSSSCFGVLPE*DGDPYP Trigger: AGGATAAGGGTCACCATCCAACTCTGGGAGAACACC...GAAACATGATGAGCTATAGAAGTGTTGAGGTTGTTTCCAAGAGTGTTGACACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113387.8 |
||
| CDS CCA 90 bp | ACCCGAGTTCTCTGTACTTGTAATCAACCACCCGGACTTCAAATGTaGATACTGTTTTCAGTGCATTTACCAGCTCGTCTTGGTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TRVLCTCNQPPGLQM*ILFSVHLPARLGSG Trigger: TCCTGAACCAAGACGAGCTGGTAAATGCACTGAAAACAGTATCCACATTTGAAGTCCGGGTGGTTGATTACAAGTACAGAGAACTCGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS GCA 90 bp | ATGTTTCTTCTTAAATGGCCACTGTGGGTGCTGCAGTACATGCTCTaGAGCCTGAAGGACAAGGTACATGAATTCTTCTACATCAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MFLLKWPLWVLQYML*SLKDKVHEFFYIKR Trigger: TCTTTTGATGTAGAAGAATTCATGTACCTTGTCCTTCAGGCTGCAGAGCATGTACTGCAGCACCCACAGTGGCCATTTAAGAAGAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
||
| CDS-3UTR CAA 90 bp | CAAGGTCAGCCTGAGCTATATTCAGAAGTAAAACGTCATGTTTCCTCTTACAGTATATCCAAAGTCAGCTaGCCTCCAGAACATGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGQPELYSEVKRHVSSYSISKVS*PPEHVL Trigger: CAGGACATGTTCTGGAGGCAAGCTGACTTTGGATAT...ACTGTAAGAGGAAACATGACGTTTTACTTCTGAATATAGCTCAGGCTGACCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS GCA 90 bp | TTAGATTTTCTAAGTGTTTCTTATATGGACAGTGGGAATCCTCCCTaGACACAGAGGCAACATGCCTGTTATTGTGCAAGAAGAAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: LDFLSVSYMDSGNPP*TQRQHACYCARRRE Trigger: TTCCCTTCTTCTTGCACAATAACAGGCATGTTGCCTCTGTGTGCAGGGAGGATTCCCACTGTCCATATAAGAAACACTTAGAAAATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054344.11 ENSMUST00000136575.8 ENSMUST00000142553.8 |
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| CDS-3UTR CAA 90 bp | GACTTAGCATCTCCTGGAGGTGTGCTTTCATATACAAAAAGTAACTCTGTAGACATTTACCAGCTCGTCTaGGTTCAGGATTTTCCGGTA | + |
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Preference number: 5 (lower is better) Translates to: DLASPGGVLSYTKSNSVDIYQLV*VQDFPV Trigger: TACCGGAAAATCCTGAACCAAGACGAGCTGGTAAAT...GTCTACAGAGTTACTTTTTGTATATGAAAGCACACCTCCAGGAGATGCTAAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS GCA 90 bp | TTTGGAATCATAGGTTTTCAAATGTATGACGTCATAGTCAGTAAATaGTTTCCAGGTATCGGAGAAGAGGTCACCATACCCGTAAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: FGIIGFQMYDVIVSK*FPGIGEEVTIPVSA Trigger: AGCACTTACGGGTATGGTGACCTCTTCTCCGATACCTGGAAAGCATTTACTGACTATGACGTCATACATTTGAAAACCTATGATTCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS GCA 72 bp | CAGGGAGGCGGAGGCTGGAGTAGTCATACAGGGCCTTaGCAGGCGCATCGTCAGCCTCAGAATGAGCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: QGGGGWSSHTGP*QAHRQPQNEPC Trigger: ACAAGGCTCATTCTGAGGCTGACGATGCGCCTGGCAAGGCCCTGTATGACTACTCCAGCCTCCGCCTCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054344.11 ENSMUST00000136575.8 ENSMUST00000142116.2 ENSMUST00000142553.8 ENSMUST00000204331.3 |
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| CDS CCA 72 bp | AGAAGAAGGGAATGTGCTCCGCAGGGAGGCGGAGGCTaGAGTAGTCATACAGGGCCTTGCCAGGCGCATCGT | + |
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Preference number: 6 (lower is better) Translates to: RRRECAPQGGGG*SSHTGPCQAHR Trigger: ACGATGCGCCTGGCAAGGCCCTGTATGACTACTCCAGCCTCCGCCTCCCTGCGGAGCACATTCCCTTCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054344.11 ENSMUST00000136575.8 ENSMUST00000142553.8 ENSMUST00000204331.3 |
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| CDS CAA 90 bp | GGACAGTGGGAATCCTCCCTGCACACAGAGGCAACATGCCTGTTATaGTGCAAGAAGAAGGGAATGTGCTCCGCAGGGAGGCGGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GQWESSLHTEATCLL*CKKKGMCSAGRRRL Trigger: CAGCCTCCGCCTCCCTGCGGAGCACATTCCCTTCTTCTTGCACAATAACAGGCATGTTGCCTCTGTGTGCAGGGAGGATTCCCACTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054344.11 ENSMUST00000136575.8 ENSMUST00000142553.8 |
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| CDS GCA 72 bp | TCTCCCAGTCGCTCTCGCGCATATCCAAAGTCAGCTTaGCTCCAGAACATGTCCTGGGCTGACTCCAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: SPSRSRAYPKSA*LQNMSWADSRV Trigger: TACTCTGGAGTCAGCCCAGGACATGTTCTGGAGGCAAGCTGACTTTGGATATGCGCGAGAGCGACTGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054344.11 ENSMUST00000136575.8 |
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| CDS CCA 72 bp | GAGCAAACCAGACTTGAGTCGCTTGCTCTCTCTGGCTaGCAGATCGTTCTTATCTCTCCCAGTCGCTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: EQTRLESLALSG*QIVLISPSRSR Trigger: GCGAGAGCGACTGGGAGAGATAAGAACGATCTGCCAGCCAGAGAGAGCAAGCGACTCAAGTCTGGTTTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054344.11 ENSMUST00000136575.8 |
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| CDS CAA 72 bp | GAATCCTCCCTGCACACAGAGGCAACATGCCTGTTATaGTGCAAGAAGAAGGGAATGTGCTCCGCAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ESSLHTEATCLL*CKKKGMCSAGR Trigger: CCTCCCTGCGGAGCACATTCCCTTCTTCTTGCACAATAACAGGCATGTTGCCTCTGTGTGCAGGGAGGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054344.11 ENSMUST00000136575.8 ENSMUST00000142553.8 ENSMUST00000204331.3 |
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| CDS TCA 72 bp | TCCAAAGTCAGCTTGCCTCCAGAACATGTCCTGGGCTaGCTCCAGAGTATCGGTCCATCCCAAGTCGACATA | + |
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Preference number: 6 (lower is better) Translates to: SKVSLPPEHVLG*LQSIGPSQVDI Trigger: TATGTCGACTTGGGATGGACCGATACTCTGGAGTCAGCCCAGGACATGTTCTGGAGGCAAGCTGACTTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054344.11 ENSMUST00000136575.8 |
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| CDS GCA 72 bp | GGACAGTGGGAATCCTCCCTGCACACAGAGGCAACATaGCTGTTATTGTGCAAGAAGAAGGGAATGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GQWESSLHTEAT*LLLCKKKGMCS Trigger: GGAGCACATTCCCTTCTTCTTGCACAATAACAGGCATGTTGCCTCTGTGTGCAGGGAGGATTCCCACTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054344.11 ENSMUST00000136575.8 ENSMUST00000142553.8 |
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| CDS CAA 90 bp | GCGTGCAAGAATGGTAACTCGAACTTTGCCATCCTTGGGTCCCTCTaGAGTGATGTTCAGCCTATGCAGCACATGCTGGGAGAAGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ACKNGNSNFAILGSL*SDVQPMQHMLGEGS Trigger: AGAGCCTTCTCCCAGCATGTGCTGCATAGGCTGAACATCACTCAAGAGGGACCCAAGGATGGCAAAGTTCGAGTTACCATTCTTGCACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS CAA 90 bp | CTCTACAATACTGAAGGTAACGGGAGCAAACCAGACTTGAGTCGCTaGCTCTCTCTGGCTGGCAGATCGTTCTTATCTCTCCCAGTCGCT | + |
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Preference number: 6 (lower is better) Translates to: LYNTEGNGSKPDLSR*LSLAGRSFLSLPVA Trigger: AGCGACTGGGAGAGATAAGAACGATCTGCCAGCCAGAGAGAGCAAGCGACTCAAGTCTGGTTTGCTCCCGTTACCTTCAGTATTGTAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS TCA 72 bp | TATCCTGAGGAAATACTTTGCTGGGCTTCCGCCAGGTaGTGTAGTGGATGCCTCAGAATGAGCCTTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: YPEEILCWASAR*CSGCLRMSLVL Trigger: CAGGACAAGGCTCATTCTGAGGCATCCACTACATCACCTGGCGGAAGCCCAGCAAAGTATTTCCTCAGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113387.8 |
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| CDS CCA 72 bp | GTCAGCCTCAGAATGAGCCTTGTCCTGGCCACTCAGTaGGACTTCATGAAGCAATACTCCAAAGACAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: VSLRMSLVLATQ*DFMKQYSKDKQ Trigger: CTGCTTGTCTTTGGAGTATTGCTTCATGAAGTCCCACTGAGTGGCCAGGACAAGGCTCATTCTGAGGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054344.11 ENSMUST00000136575.8 ENSMUST00000142116.2 ENSMUST00000142553.8 ENSMUST00000204331.3 |
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| CDS CCA 72 bp | GACATAGCTGCAAACGGGGGAACCGAATCTAAACTCTaGTGCGCAGGACTTCTCATAACCCCAGCAGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: DIAANGGTESKL*CAGLLITPAVV Trigger: AACTACTGCTGGGGTTATGAGAAGTCCTGCGCACCAGAGTTTAGATTCGGTTCCCCCGTTTGCAGCTATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054344.11 ENSMUST00000136575.8 |
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| CDS CCA 72 bp | GGATGCCTCAGAATGAGCCTTGTCCTGGCCACTCAGTaGGACTTCATGAAGCAATACTCCAAAGACAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GCLRMSLVLATQ*DFMKQYSKDKQ Trigger: CTGCTTGTCTTTGGAGTATTGCTTCATGAAGTCCCACTGAGTGGCCAGGACAAGGCTCATTCTGAGGCATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113387.8 |
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| CDS CAA 72 bp | ACTGAAGGTAACGGGAGCAAACCAGACTTGAGTCGCTaGCTCTCTCTGGCTGGCAGATCGTTCTTATCTCTC | + |
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Preference number: 6 (lower is better) Translates to: TEGNGSKPDLSR*LSLAGRSFLSL Trigger: GAGAGATAAGAACGATCTGCCAGCCAGAGAGAGCAAGCGACTCAAGTCTGGTTTGCTCCCGTTACCTTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS CAA 72 bp | CTCTACAATACTGAAGGTAACGGGAGCAAACCAGACTaGAGTCGCTTGCTCTCTCTGGCTGGCAGATCGTTC | + |
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Preference number: 6 (lower is better) Translates to: LYNTEGNGSKPD*SRLLSLAGRSF Trigger: GAACGATCTGCCAGCCAGAGAGAGCAAGCGACTCAAGTCTGGTTTGCTCCCGTTACCTTCAGTATTGTAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS TCA 72 bp | TCTACAATACTGAAGGTAACGGGAGCAAACCAGACTTaGGTCGCTTGCTCTCTCTGGCTGGCAGATCGTTCT | + |
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Preference number: 6 (lower is better) Translates to: STILKVTGANQT*VACSLWLADRS Trigger: AGAACGATCTGCCAGCCAGAGAGAGCAAGCGACTCAAGTCTGGTTTGCTCCCGTTACCTTCAGTATTGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS CCA 72 bp | TCGAACACAGCAGCCCAGTCCGGAAGGAAAAGTAAGTaGGTAAGGCCAGCTCCATGCATGCCAATAAATATG | + |
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Preference number: 6 (lower is better) Translates to: SNTAAQSGRKSK*VRPAPCMPINM Trigger: CATATTTATTGGCATGCATGGAGCTGGCCTTACCCACTTACTTTTCCTTCCGGACTGGGCTGCTGTGTTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS GCA 72 bp | CTGCAGGGGACTTTTACGCTGCCCTTCAGACACCAGTaGATGACTGTCAAGTTTACAGTATCCACCAATTTC | + |
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Preference number: 6 (lower is better) Translates to: LQGTFTLPFRHQ*MTVKFTVSTNF Trigger: GAAATTGGTGGATACTGTAAACTTGACAGTCATGCACTGGTGTCTGAAGGGCAGCGTAAAAGTCCCCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS GCA 72 bp | GTCTTGGTTCAGGATTTTCCGGTATTCTGTGCTGCGTaGAAGAATGGTAACTCGAACTTTGCCATCCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: VLVQDFPVFCAA*KNGNSNFAILG Trigger: CCCAAGGATGGCAAAGTTCGAGTTACCATTCTTGCACGCAGCACAGAATACCGGAAAATCCTGAACCAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS GCA 72 bp | TCCGGAAGGAAAAGTAAGTGGGTAAGGCCAGCTCCATaGATGCCAATAAATATGTCCGTGTTGTGCGTGATC | + |
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Preference number: 6 (lower is better) Translates to: SGRKSKWVRPAP*MPINMSVLCVI Trigger: GATCACGCACAACACGGACATATTTATTGGCATGCATGGAGCTGGCCTTACCCACTTACTTTTCCTTCCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS GCA 72 bp | CTTAAATGGCCACTGTGGGTGCTGCAGTACATGCTCTaGAGCCTGAAGGACAAGGTACATGAATTCTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: LKWPLWVLQYML*SLKDKVHEFFY Trigger: GTAGAAGAATTCATGTACCTTGTCCTTCAGGCTGCAGAGCATGTACTGCAGCACCCACAGTGGCCATTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS GCA 72 bp | AACCACCCGGACTTCAAATGTGGATACTGTTTTCAGTaGATTTACCAGCTCGTCTTGGTTCAGGATTTTCCG | + |
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Preference number: 6 (lower is better) Translates to: NHPDFKCGYCFQ*IYQLVLVQDFP Trigger: CGGAAAATCCTGAACCAAGACGAGCTGGTAAATGCACTGAAAACAGTATCCACATTTGAAGTCCGGGTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS TCA 72 bp | CTGTCAAGTTTACAGTATCCACCAATTTCACCACCCTaGAGAAAATCTTCCTTGAATCTGTCGTGGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LSSLQYPPISPP*RKSSLNLSWFL Trigger: GAGAAACCACGACAGATTCAAGGAAGATTTTCTTCAGGGTGGTGAAATTGGTGGATACTGTAAACTTGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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| CDS GCA 72 bp | ATAGGTTTTCAAATGTATGACGTCATAGTCAGTAAATaGTTTCCAGGTATCGGAGAAGAGGTCACCATACCC | + |
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Preference number: 6 (lower is better) Translates to: IGFQMYDVIVSK*FPGIGEEVTIP Trigger: GGGTATGGTGACCTCTTCTCCGATACCTGGAAAGCATTTACTGACTATGACGTCATACATTTGAAAACCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054344.11 |
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