Pregenerated sensors for ENY2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022338Ensembl transcript IDs: ENSMUST00000060652.5, ENSMUST00000226336.2, ENSMUST00000226355.2, ENSMUST00000228130.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCAGGGAAACGATGAGGAAGATAGTGGAGGCACAGAGGAGTCACTaGAATCACTTGGGCTTAGGAGGGCCACAAATGATAATCCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: GRETMRKIVEAQRSH*NHLGLGGPQMIIQV Trigger: AACTTGGATTATCATTTGTGGCCCTCCTAAGCCCAAGTGATTGCAGTGACTCCTCTGTGCCTCCACTATCTTCCTCATCGTTTCCCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR TCA 90 bp | TCAGTCACTGCCTTATCCATTCTTTCAGAAATGAGAATCATACAATaGATTTGTTCCCTCCCCTCCAGATGGGCTAACATCCCTGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: SVTALSILSEMRIIQ*ICSLPSRWANIPVL Trigger: GAGCACAGGGATGTTAGCCCATCTGGAGGGGAGGGAACAAATTCATTGTATGATTCTCATTTCTGAAAGAATGGATAAGGCAGTGACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR TCA 90 bp | AGAATTAAGTCTGGTTGTGAGAATGTTCAGCATATATCAATCTGTTaGTATTTGAAACATGGCAGACTCACCTCCTGGGATTCAACCAGG | + |
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Preference number: 1 (lower is better) Translates to: RIKSGCENVQHISIC*YLKHGRLTSWDSTR Trigger: CCTGGTTGAATCCCAGGAGGTGAGTCTGCCATGTTTCAAATATCAACAGATTGATATATGCTGAACATTCTCACAACCAGACTTAATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR GCA 90 bp | AGGACTTTATCACGTGCTCCTGTAGTGCTCACTCAGTTCAGTCACTaGCTTATCCATTCTTTCAGAAATGAGAATCATACAATGAATTTG | + |
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Preference number: 1 (lower is better) Translates to: RTLSRAPVVLTQFSH*LIHSFRNENHTMNL Trigger: CAAATTCATTGTATGATTCTCATTTCTGAAAGAATGGATAAGGCAGTGACTGAACTGAGTGAGCACTACAGGAGCACGTGATAAAGTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR TCA 90 bp | AACATCCCTGTGCTCCCAGGTCTCAGGATTCATGCTCAAGGCCAGTGTGAGGCTGTGAGGCTAGCTGACTaGTGGAGGGACAGCCTACCT | + |
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Preference number: 2 (lower is better) Translates to: NIPVLPGLRIHAQGQCEAVRLAD*WRDSLP Trigger: AGGTAGGCTGTCCCTCCATCAGTCAGCTAGCCTCAC...AGCCTCACACTGGCCTTGAGCATGAATCCTGAGACCTGGGAGCACAGGGATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR GCA 90 bp | AACATCCCTGTGCTCCCAGGTCTCAGGATTCATGCTCAAGGCCAGTGTGAGGCTAGTGTGAGGAGGGGATaGAAAGTTCCAAGTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: NIPVLPGLRIHAQGQCEASVRRG*KVPSGR Trigger: CCTTCCACTTGGAACTTTGCATCCCCTCCTCACACT...AGCCTCACACTGGCCTTGAGCATGAATCCTGAGACCTGGGAGCACAGGGATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR TCA 90 bp | TCACGTGCTCCTGTAGTGCTCACTCAGTTCAGTCACTGCCTTATCCATTCTTTCCAGTGTGAGGCTAGCTaGCTGATGGAGGGACAGCCT | + |
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Preference number: 2 (lower is better) Translates to: SRAPVVLTQFSHCLIHSFQCEAS*LMEGQP Trigger: AGGCTGTCCCTCCATCAGTCAGCTAGCCTCACACTG...GAAAGAATGGATAAGGCAGTGACTGAACTGAGTGAGCACTACAGGAGCACGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGGATCAGGTATTCAAGACTTACCTAGGCTACATAGCAAGTACAGAGAAAGCGTGAGGCTAGCTGACTaGTGGAGGGACAGCCTACCT | + |
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Preference number: 2 (lower is better) Translates to: GGSGIQDLPRLHSKYRESVRLAD*WRDSLP Trigger: AGGTAGGCTGTCCCTCCATCAGTCAGCTAGCCTCAC...GCTTTCTCTGTACTTGCTATGTAGCCTAGGTAAGTCTTGAATACCTGATCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060652.5 |
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| 3UTR-3UTR TCA 90 bp | AACATCCCTGTGCTCCCAGGTCTCAGGATTCATGCTCAAGGCCAGTGTGAGGCTTCAGTGACAAGGAATTaGAATCATGAGACTGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: NIPVLPGLRIHAQGQCEASVTRN*NHETVR Trigger: TCTGACAGTCTCATGATTTCAATTCCTTGTCACTGA...AGCCTCACACTGGCCTTGAGCATGAATCCTGAGACCTGGGAGCACAGGGATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR CCA 90 bp | AATGTAGTGTGGACGATGAACCCTTTTCTCAACTGTACCTATATATTAGGACTTTCCCTCCCCTCCAGATaGGCTAACATCCCTGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: NVVWTMNPFLNCTYILGLSLPSR*ANIPVL Trigger: GAGCACAGGGATGTTAGCCCATCTGGAGGGGAGGGA...AAGTCCTAATATATAGGTACAGTTGAGAAAAGGGTTCATCGTCCACACTACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCGAAAAATAGCATTAATATTCATCTTGAGTCACTTGTGTCTGAGAGACCCAGTGTGAGGAGGGGATaGAAAGTTCCAAGTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: PPKNSINIHLESLVSERPSVRRG*KVPSGR Trigger: CCTTCCACTTGGAACTTTGCATCCCCTCCTCACACT...GGGTCTCTCAGACACAAGTGACTCAAGATGAATATTAATGCTATTTTTCGGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR CCA 90 bp | GTATGGTCATTTAAAGGTGTTTGTGAACTATCCAAGGAAGTAGACCCACTGGTGGGTGTTCAGTCAGCTTaGAAATGTTCTGTCTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: VWSFKGVCELSKEVDPLVGVQSA*KCSVFH Trigger: GTGGAAGACAGAACATTTCCAAGCTGACTGAACACC...CACCAGTGGGTCTACTTCCTTGGATAGTTCACAAACACCTTTAAATGACCATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR GCA 90 bp | AATGTAGTGTGGACGATGAACCCTTTTCTCAACTGTACCTATATATTAGGACTTGCACAGAGGAGTCACTaGAATCACTTGGGCTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: NVVWTMNPFLNCTYILGLAQRSH*NHLGLG Trigger: TCCTAAGCCCAAGTGATTGCAGTGACTCCTCTGTGC...AAGTCCTAATATATAGGTACAGTTGAGAAAAGGGTTCATCGTCCACACTACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGATCAGGTATTCAAGACTTACCTAGGCTACATAGCAAGTACAGAGAAAGCCTTGACCTCAGAATATaGGGATGCAATTTAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: GGSGIQDLPRLHSKYRESLDLRI*GCNLEI Trigger: AATCTCTAAATTGCATCCCCATATTCTGAGGTCAAG...GCTTTCTCTGTACTTGCTATGTAGCCTAGGTAAGTCTTGAATACCTGATCCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060652.5 |
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| 3UTR-3UTR CCA 90 bp | GCATTAATATTCATCTTGAGTCACTTGTGTCTGAGAGACCCCATGAATAAGGACTTGATATTTGAAACATaGCAGACTCACCTCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: ALIFILSHLCLRDPMNKDLIFET*QTHLLG Trigger: TCCCAGGAGGTGAGTCTGCCATGTTTCAAATATCAA...GTCCTTATTCATGGGGTCTCTCAGACACAAGTGACTCAAGATGAATATTAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCGAAAAATAGCATTAATATTCATCTTGAGTCACTTGTGTCTGAGAGACCCATTAGAGTTCTTTCTTaGCCTCAGAATATGGGGATG | + |
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Preference number: 2 (lower is better) Translates to: PPKNSINIHLESLVSERPIRVLS*PQNMGM Trigger: CATCCCCATATTCTGAGGTCAAGAAAGAACTCTAAT...GGGTCTCTCAGACACAAGTGACTCAAGATGAATATTAATGCTATTTTTCGGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR TCA 90 bp | AATGTAGTGTGGACGATGAACCCTTTTCTCAACTGTACCTATATATTAGGACTTACTCAAGCTGAACTCTaGAGGGAAAGTAGTAACATG | + |
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Preference number: 2 (lower is better) Translates to: NVVWTMNPFLNCTYILGLTQAEL*RESSNM Trigger: CATGTTACTACTTTCCCTTCAGAGTTCAGCTTGAGT...AAGTCCTAATATATAGGTACAGTTGAGAAAAGGGTTCATCGTCCACACTACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTATCCATTCTTTCAGAAATGAGAATCATACAATGAATTTGTTCCCTCCCCAATCTGTTGATATTTaGAACATGGCAGACTCACCT | + |
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Preference number: 2 (lower is better) Translates to: CLIHSFRNENHTMNLFPPQSVDI*NMADSP Trigger: AGGTGAGTCTGCCATGTTTCAAATATCAACAGATTG...GGGAGGGAACAAATTCATTGTATGATTCTCATTTCTGAAAGAATGGATAAGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR TCA 90 bp | AATGTAGTGTGGACGATGAACCCTTTTCTCAACTGTACCTATATATTAGGACTTTCAGTGACAAGGAATTaGAATCATGAGACTGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: NVVWTMNPFLNCTYILGLSVTRN*NHETVR Trigger: TCTGACAGTCTCATGATTTCAATTCCTTGTCACTGA...AAGTCCTAATATATAGGTACAGTTGAGAAAAGGGTTCATCGTCCACACTACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTATCCATTCTTTCAGAAATGAGAATCATACAATGAATTTGTTCCCTCCCCTTTCAAAGTTCAGATaGGTAGAAAATGTGGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: CLIHSFRNENHTMNLFPPLSKFR*VENVVF Trigger: GAACACCACATTTTCTACTCATCTGAACTTTGAAAG...GGGAGGGAACAAATTCATTGTATGATTCTCATTTCTGAAAGAATGGATAAGGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR TCA 90 bp | AATGTAGTGTGGACGATGAACCCTTTTCTCAACTGTACCTATATATTAGGACTTCTTTCAAAGTTCAGATaGGTAGAAAATGTGGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: NVVWTMNPFLNCTYILGLLSKFR*VENVVF Trigger: GAACACCACATTTTCTACTCATCTGAACTTTGAAAG...AAGTCCTAATATATAGGTACAGTTGAGAAAAGGGTTCATCGTCCACACTACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCTTATCCATTCTTTCAGAAATGAGAATCATACAATGAATTTGTTCCCTCCCCTTGACCTCAGAATATaGGGATGCAATTTAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: CLIHSFRNENHTMNLFPPLDLRI*GCNLEI Trigger: AATCTCTAAATTGCATCCCCATATTCTGAGGTCAAG...GGGAGGGAACAAATTCATTGTATGATTCTCATTTCTGAAAGAATGGATAAGGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR TCA 72 bp | CTACATAGCAAGTACAGAGAAAGCCTGGACTACATGTaGCCCTGTCTCAAAACAAACCGGGGTGGGCGGGGG | + |
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Preference number: 3 (lower is better) Translates to: LHSKYRESLDYM*PCLKTNRGGRG Trigger: CCCCCGCCCACCCCGGTTTGTTTTGAGACAGGGTCACATGTAGTCCAGGCTTTCTCTGTACTTGCTATGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060652.5 |
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| 3UTR-3UTR CAA 90 bp | AACATCCCTGTGCTCCCAGGTCTCAGGATTCATGCTCAAGGCCAGTGTGAGGCTTTCATCTTGAGTCACTaGTGTCTGAGAGACCCCATG | + |
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Preference number: 3 (lower is better) Translates to: NIPVLPGLRIHAQGQCEAFILSH*CLRDPM Trigger: CATGGGGTCTCTCAGACACAAGTGACTCAAGATGAA...AGCCTCACACTGGCCTTGAGCATGAATCCTGAGACCTGGGAGCACAGGGATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR TCA 72 bp | CTCAGGATTCATGCTCAAGGCCAGTGTGAGGCTAGCTaGCTGATGGAGGGACAGCCTACCTCAAAAATCCAA | + |
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Preference number: 3 (lower is better) Translates to: LRIHAQGQCEAS*LMEGQPTSKIQ Trigger: TTGGATTTTTGAGGTAGGCTGTCCCTCCATCAGTCAGCTAGCCTCACACTGGCCTTGAGCATGAATCCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR GCA 72 bp | GGACTTCCAATGGTAGGAAGCAGTGTGAGGAGGGGATaGAAAGTTCCAAGTGGAAGGGTGGCCAACATAATC | + |
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Preference number: 3 (lower is better) Translates to: GLPMVGSSVRRG*KVPSGRVANII Trigger: GATTATGTTGGCCACCCTTCCACTTGGAACTTTGCATCCCCTCCTCACACTGCTTCCTACCATTGGAAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR CCA 72 bp | AGGAAGCAGTGTGAGGAGGGGATGCAAAGTTCCAAGTaGAAGGGTGGCCAACATAATCACTCTGCGTCAAAG | + |
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Preference number: 3 (lower is better) Translates to: RKQCEEGMQSSK*KGGQHNHSASK Trigger: CTTTGACGCAGAGTGATTATGTTGGCCACCCTTCCACTTGGAACTTTGCATCCCCTCCTCACACTGCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR GCA 72 bp | ACGATGAGGAAGATAGTGGAGGCACAGAGGAGTCACTaGAATCACTTGGGCTTAGGAGGGCCACAAATGATA | + |
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Preference number: 3 (lower is better) Translates to: TMRKIVEAQRSH*NHLGLGGPQMI Trigger: TATCATTTGTGGCCCTCCTAAGCCCAAGTGATTGCAGTGACTCCTCTGTGCCTCCACTATCTTCCTCATCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCAAGACTTACCTAGGCTACATAGCAAGTACAGAGAAAGCCTGGACTACATGTTCATCTTGAGTCACTaGTGTCTGAGAGACCCCATG | + |
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Preference number: 3 (lower is better) Translates to: IQDLPRLHSKYRESLDYMFILSH*CLRDPM Trigger: CATGGGGTCTCTCAGACACAAGTGACTCAAGATGAA...CATGTAGTCCAGGCTTTCTCTGTACTTGCTATGTAGCCTAGGTAAGTCTTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060652.5 |
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| 3UTR-3UTR CAA 90 bp | TGCCTTATCCATTCTTTCAGAAATGAGAATCATACAATGAATTTGTTCCCTCCCAGTCACTGCAATCACTaGGGCTTAGGAGGGCCACAA | + |
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Preference number: 3 (lower is better) Translates to: CLIHSFRNENHTMNLFPPSHCNH*GLGGPQ Trigger: TTGTGGCCCTCCTAAGCCCAAGTGATTGCAGTGACT...GGGAGGGAACAAATTCATTGTATGATTCTCATTTCTGAAAGAATGGATAAGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR GCA 72 bp | TCACGTGCTCCTGTAGTGCTCACTCAGTTCAGTCACTaGCTTATCCATTCTTTCAGAAATGAGAATCATACA | + |
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Preference number: 3 (lower is better) Translates to: SRAPVVLTQFSH*LIHSFRNENHT Trigger: TGTATGATTCTCATTTCTGAAAGAATGGATAAGGCAGTGACTGAACTGAGTGAGCACTACAGGAGCACGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR TCA 72 bp | GCCTTATCCATTCTTTCAGAAATGAGAATCATACAATaGATTTGTTCCCTCCCCTCCAGATGGGCTAACATC | + |
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Preference number: 3 (lower is better) Translates to: ALSILSEMRIIQ*ICSLPSRWANI Trigger: GATGTTAGCCCATCTGGAGGGGAGGGAACAAATTCATTGTATGATTCTCATTTCTGAAAGAATGGATAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR-3UTR CAA 90 bp | AATGTAGTGTGGACGATGAACCCTTTTCTCAACTGTACCTATATATTAGGACTTTGGTGTTCAGTCAGCTaGGAAATGTTCTGTCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: NVVWTMNPFLNCTYILGLWCSVS*EMFCLP Trigger: TGGAAGACAGAACATTTCCAAGCTGACTGAACACCA...AAGTCCTAATATATAGGTACAGTTGAGAAAAGGGTTCATCGTCCACACTACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR TCA 72 bp | TCTGGTTGTGAGAATGTTCAGCATATATCAATCTGTTaGTATTTGAAACATGGCAGACTCACCTCCTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: SGCENVQHISIC*YLKHGRLTSWD Trigger: ATCCCAGGAGGTGAGTCTGCCATGTTTCAAATATCAACAGATTGATATATGCTGAACATTCTCACAACCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR CCA 72 bp | TGTTCAGCATATATCAATCTGTTGATATTTGAAACATaGCAGACTCACCTCCTGGGATTCAACCAGGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: CSAYINLLIFET*QTHLLGFNQGK Trigger: TTTTCCCTGGTTGAATCCCAGGAGGTGAGTCTGCCATGTTTCAAATATCAACAGATTGATATATGCTGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| CDS-3UTR TCA 90 bp | TCACGTGCTCCTGTAGTGCTCACTCAGTTCAGTCACTGCCTTATCCATTCTTTCCAGTGTGCCTTTAGCTaGTCCTTCCAGCCGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: SRAPVVLTQFSHCLIHSFQCAFS*SFQPHS Trigger: TGAGTGCGGCTGGAAGGATCAGCTAAAGGCACACTG...GAAAGAATGGATAAGGCAGTGACTGAACTGAGTGAGCACTACAGGAGCACGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| 3UTR CAA 72 bp | AAGATAGTGGAGGCACAGAGGAGTCACTGCAATCACTaGGGCTTAGGAGGGCCACAAATGATAATCCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: KIVEAQRSHCNH*GLGGPQMIIQV Trigger: AACTTGGATTATCATTTGTGGCCCTCCTAAGCCCAAGTGATTGCAGTGACTCCTCTGTGCCTCCACTATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| CDS-3UTR TCA 90 bp | ACACTGATAGACAAGAGTCCATTAGATCTGGTAATCCTGATTGATGTCAGAGTACAGTGTGCCTTTAGCTaGTCCTTCCAGCCGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: TLIDKSPLDLVILIDVRVQCAFS*SFQPHS Trigger: TGAGTGCGGCTGGAAGGATCAGCTAAAGGCACACTG...TACTCTGACATCAATCAGGATTACCAGATCTAATGGACTCTTGTCTATCAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060652.5 ENSMUST00000226336.2 |
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| CDS GCA 72 bp | GAGCTGGTGGAATGTAAATTTGGAACTGCTAATCTCTaGCACCTGTGGGTAGGGCCGTTCTCTTTCTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: ELVECKFGTANL*HLWVGPFSFSS Trigger: ACTGGAGAAAGAGAACGGCCCTACCCACAGGTGGCAGAGATTAGCAGTTCCAAATTTACATTCCACCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226355.2 ENSMUST00000228130.2 |
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| CDS CCA 72 bp | GTGAGGCTCTTTGCTGAGATAGGTACTCTGAGCTGGTaGAATGTAAATTTGGAACTGCTAATCTCTGCCACC | + |
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Preference number: 6 (lower is better) Translates to: VRLFAEIGTLSW*NVNLELLISAT Trigger: GGTGGCAGAGATTAGCAGTTCCAAATTTACATTCCACCAGCTCAGAGTACCTATCTCAGCAAAGAGCCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226355.2 ENSMUST00000228130.2 |
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| CDS CCA 72 bp | CAAGTGAGGCTCTTTGCTGAGATAGGTACTCTGAGCTaGTGGAATGTAAATTTGGAACTGCTAATCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: QVRLFAEIGTLS*WNVNLELLISA Trigger: GGCAGAGATTAGCAGTTCCAAATTTACATTCCACCAGCTCAGAGTACCTATCTCAGCAAAGAGCCTCACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226355.2 ENSMUST00000228130.2 |
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