Pregenerated sensors for ENTR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026927Ensembl transcript IDs: ENSMUST00000028293.12, ENSMUST00000077983.13, ENSMUST00000114100.10, ENSMUST00000114102.10, ENSMUST00000139738.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCTGGTGGGAGGACGGCAGCACGTACCAAGCGGTGCTGCCTCAGTaGGGCACGCGTCTCTGTACAGGCTGCTCACTTACACACTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: SWWEDGSTYQAVLPQ*GTRLCTGCSLTHWL Trigger: GAGCCAGTGTGTAAGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR GCA 90 bp | TCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACCAAGCGGTGCTaGCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTTACAC | + |
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Preference number: 1 (lower is better) Translates to: SYGPGGRTAARTKRC*LSEARVSVQAAHLH Trigger: GTGTAAGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR GCA 90 bp | TGGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACCAAGCGGTaGTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTTA | + |
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Preference number: 1 (lower is better) Translates to: WSYGPGGRTAARTKR*CLSEARVSVQAAHL Trigger: TAAGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR CCA 90 bp | GTGTATGAAGCTTTGCACTGTGCACAGTGTGTGACCTTGGTCCTATaGTCCTGGTGGGAGGACGGCAGCACGTACCAAGCGGTGCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: VYEALHCAQCVTLVL*SWWEDGSTYQAVLP Trigger: AGGCAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGCACAGTGCAAAGCTTCATACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR TCA 90 bp | GCACACAGTAGAGGGTGTATGAAGCTTTGCACTGTGCACAGTGTGTaGCCTTGGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACC | + |
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Preference number: 1 (lower is better) Translates to: AHSRGCMKLCTVHSV*PWSYGPGGRTAART Trigger: GGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGCACAGTGCAAAGCTTCATACACCCTCTACTGTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR GCA 90 bp | CCAAACCTTGACCCCTCAGCACAGCACAGGGAGCTGCTTATGTCTTaGCTGTCCTTCAAAAACCAGCCAGCCAGCCCAAAGAGCTGGTGC | + |
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Preference number: 1 (lower is better) Translates to: PNLDPSAQHRELLMS*LSFKNQPASPKSWC Trigger: GCACCAGCTCTTTGGGCTGGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGCTCCCTGTGCTGTGCTGAGGGGTCAAGGTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR TCA 90 bp | GGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACCAAGCGGTGCTGCCTCACTTCCAGTAAATCAGTaGGTCTATCGAACAGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: GPMVLVGGRQHVPSGAASLPVNQ*VYRTVG Trigger: TCCCACTGTTCGATAGACTCACTGATTTACTGGAAG...TGAGGCAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR CCA 90 bp | GTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTACTGTTAGGTTCAACTaGTGGAAAGGAGCCCCGTAC | + |
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Preference number: 2 (lower is better) Translates to: VPSGAASVRHASLYRLLTTVRFN*WKGAPY Trigger: GTACGGGGCTCCTTTCCACCAGTTGAACCTAACAGT...AGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCAGCCCAAAGAGCTGGTCCTATGGTCCTGGTaGGAGGACGGCAGCACGTAC | + |
|
Preference number: 2 (lower is better) Translates to: AAYVLPVLQKPASQPKELVLWSW*EDGSTY Trigger: GTACGTGCTGCCGTCCTCCCACCAGGACCATAGGAC...CAGCTCTTTGGGCTGGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR TCA 90 bp | GCACGTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCTTCCAGTAAATCAGTaGGTCTATCGAACAGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: ARTKRCCLSEARVSVQAALPVNQ*VYRTVG Trigger: TCCCACTGTTCGATAGACTCACTGATTTACTGGAAG...AGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTACGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR TCA 90 bp | GCACAGCACAGGGAGCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCATGGCTTTCCAAAGCTaGCAGCACACAGTAGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: AQHRELLMSCLSFKNQPAMAFQS*QHTVEG Trigger: ACCCTCTACTGTGTGCTGTCAGCTTTGGAAAGCCAT...GGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGCTCCCTGTGCTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR CCA 90 bp | GCACAGCACAGGGAGCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCACTGTTAGGTTCAACTaGTGGAAAGGAGCCCCGTAC | + |
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Preference number: 2 (lower is better) Translates to: AQHRELLMSCLSFKNQPATVRFN*WKGAPY Trigger: GTACGGGGCTCCTTTCCACCAGTTGAACCTAACAGT...GGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGCTCCCTGTGCTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR GCA 90 bp | GCACAGCACAGGGAGCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCACAAACACATTAACGTaGATCAAAATCGACAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: AQHRELLMSCLSFKNQPATNTLT*IKIDSP Trigger: GGGGCTGTCGATTTTGATGCACGTTAATGTGTTTGT...GGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGCTCCCTGTGCTGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCCCAAATGGCTTTCCAAAGCTGACAGCACACAGTAGAGGGTGTATGAAGACTGTTAGGTTCAACTaGTGGAAAGGAGCCCCGTAC | + |
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Preference number: 2 (lower is better) Translates to: TAPNGFPKLTAHSRGCMKTVRFN*WKGAPY Trigger: GTACGGGGCTCCTTTCCACCAGTTGAACCTAACAGT...CTTCATACACCCTCTACTGTGTGCTGTCAGCTTTGGAAAGCCATTTGGGGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR TCA 90 bp | ACAGCCCCAAATGGCTTTCCAAAGCTGACAGCACACAGTAGAGGGTGTATGAAGCTTCCAGTAAATCAGTaGGTCTATCGAACAGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: TAPNGFPKLTAHSRGCMKLPVNQ*VYRTVG Trigger: TCCCACTGTTCGATAGACTCACTGATTTACTGGAAG...CTTCATACACCCTCTACTGTGTGCTGTCAGCTTTGGAAAGCCATTTGGGGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR GCA 90 bp | GCACAGCACAGGGAGCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCAATTCCAGTCTGAATTaGACTATACAAAAGGCACAC | + |
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Preference number: 2 (lower is better) Translates to: AQHRELLMSCLSFKNQPANSSLN*TIQKAH Trigger: GTGTGCCTTTTGTATAGTGCAATTCAGACTGGAATT...GGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGCTCCCTGTGCTGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR TCA 90 bp | AATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATCGACAGATGGCTTTCCAAAGCTaGCAGCACACAGTAGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: NCTIQKAHKHINVHQNRQMAFQS*QHTVEG Trigger: ACCCTCTACTGTGTGCTGTCAGCTTTGGAAAGCCAT...CTGTCGATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR TCA 90 bp | AATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATCGACAGACAGTAGAGGGTGTATaGAGCTTTGCACTGTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: NCTIQKAHKHINVHQNRQTVEGV*SFALCT Trigger: TGTGCACAGTGCAAAGCTTCATACACCCTCTACTGT...CTGTCGATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR CCA 90 bp | AGTCTGAATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATACTGTTAGGTTCAACTaGTGGAAAGGAGCCCCGTAC | + |
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Preference number: 2 (lower is better) Translates to: SLNCTIQKAHKHINVHQNTVRFN*WKGAPY Trigger: GTACGGGGCTCCTTTCCACCAGTTGAACCTAACAGT...ATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATTCAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR TCA 90 bp | AATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATCGACAGCTTCCAGTAAATCAGTaGGTCTATCGAACAGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: NCTIQKAHKHINVHQNRQLPVNQ*VYRTVG Trigger: TCCCACTGTTCGATAGACTCACTGATTTACTGGAAG...CTGTCGATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR GCA 72 bp | GGTCCTGGTGGGAGGACGGCAGCACGTACCAAGCGGTaGTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCT | + |
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Preference number: 3 (lower is better) Translates to: GPGGRTAARTKR*CLSEARVSVQA Trigger: AGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR TCA 72 bp | GAGGACGGCAGCACGTACCAAGCGGTGCTGCCTCAGTaGGGCACGCGTCTCTGTACAGGCTGCTCACTTACA | + |
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Preference number: 3 (lower is better) Translates to: EDGSTYQAVLPQ*GTRLCTGCSLT Trigger: TGTAAGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTACGTGCTGCCGTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR CCA 72 bp | CACTGTGCACAGTGTGTGACCTTGGTCCTATGGTCCTaGTGGGAGGACGGCAGCACGTACCAAGCGGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: HCAQCVTLVLWS*WEDGSTYQAVL Trigger: CAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGCACAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR CCA 72 bp | GCTTTGCACTGTGCACAGTGTGTGACCTTGGTCCTATaGTCCTGGTGGGAGGACGGCAGCACGTACCAAGCG | + |
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Preference number: 3 (lower is better) Translates to: ALHCAQCVTLVL*SWWEDGSTYQA Trigger: CGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGCACAGTGCAAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR TCA 72 bp | AGAGGGTGTATGAAGCTTTGCACTGTGCACAGTGTGTaGCCTTGGTCCTATGGTCCTGGTGGGAGGACGGCA | + |
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Preference number: 3 (lower is better) Translates to: RGCMKLCTVHSV*PWSYGPGGRTA Trigger: TGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGCACAGTGCAAAGCTTCATACACCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR CAA 90 bp | ACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACCAGGTGGTGAAAGAAGCTaGTTACAAAACTGTCGTTTC | + |
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Preference number: 3 (lower is better) Translates to: TVCDLGPMVLVGGRQHVPGGERS*LQNCRF Trigger: GAAACGACAGTTTTGTAACAAGCTTCTTTCACCACC...TGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR CAA 90 bp | GCTTTGCACTGTGCACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACGGTGGTGAAAGAAGCTaGTTACAAAACTGTCGTTTC | + |
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Preference number: 3 (lower is better) Translates to: ALHCAQCVTLVLWSWWEDGGERS*LQNCRF Trigger: GAAACGACAGTTTTGTAACAAGCTTCTTTCACCACC...GTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGCACAGTGCAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR CAA 90 bp | GCATCAAAATCGACAGCCCCAAATGGCTTTCCAAAGCTGACAGCACACAGTAGAGGTGGTGAAAGAAGCTaGTTACAAAACTGTCGTTTC | + |
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Preference number: 3 (lower is better) Translates to: ASKSTAPNGFPKLTAHSRGGERS*LQNCRF Trigger: GAAACGACAGTTTTGTAACAAGCTTCTTTCACCACC...TCTACTGTGTGCTGTCAGCTTTGGAAAGCCATTTGGGGCTGTCGATTTTGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR-3UTR CAA 90 bp | AGTCTGAATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATGCACAGTGTGTGACCTaGGTCCTATGGTCCTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: SLNCTIQKAHKHINVHQNAQCVT*VLWSWW Trigger: CCACCAGGACCATAGGACCAAGGTCACACACTGTGC...ATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATTCAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| 3UTR GCA 72 bp | CCCCAGGTGGGTGTGTGCTTTAATTCCAGTCTGAATTaGACTATACAAAAGGCACACAAACACATTAACGTG | + |
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Preference number: 3 (lower is better) Translates to: PQVGVCFNSSLN*TIQKAHKHINV Trigger: CACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATTCAGACTGGAATTAAAGCACACACCCACCTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| CDS-3UTR GCA 90 bp | GGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACCAAGCGGTGCTGCCTCACCGAAGAGATGGGGGTaGAGGTCCCCGCCATGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GPMVLVGGRQHVPSGAASPKRWG*RSPPWG Trigger: CCCCCATGGCGGGGACCTGCACCCCCATCTCTTCGG...TGAGGCAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| CDS-3UTR GCA 90 bp | GTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTCCGAAGAGATGGGGGTaGAGGTCCCCGCCATGGGGG | + |
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Preference number: 4 (lower is better) Translates to: VPSGAASVRHASLYRLLTPKRWG*RSPPWG Trigger: CCCCCATGGCGGGGACCTGCACCCCCATCTCTTCGG...AGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| CDS-3UTR GCA 90 bp | CAGCACGTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGGAGGCAGGGGAGCTGTaGTCTAGTCCCAGTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: QHVPSGAASVRHASLYRLEAGEL*SSPSGC Trigger: GCACCCACTGGGACTAGAGCACAGCTCCCCTGCCTC...CAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTACGTGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| CDS-3UTR CCA 90 bp | GGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACCAAGCGGTGCTGCCTCAACGCTGGGGAGATCCTaGAGTCGGTGTCACTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: GPMVLVGGRQHVPSGAASTLGRS*SRCHSA Trigger: CGCTGAGTGACACCGACTCCAGGATCTCCCCAGCGT...TGAGGCAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| CDS-3UTR CCA 90 bp | GCACGTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCCCAGCTGGAGACGCTaGGGAGATCCTGGAGTCGGT | + |
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Preference number: 4 (lower is better) Translates to: ARTKRCCLSEARVSVQAAPSWRR*GDPGVG Trigger: ACCGACTCCAGGATCTCCCCAGCGTCTCCAGCTGGG...AGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTACGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| CDS-3UTR CCA 90 bp | GTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTCCCAGCTGGAGACGCTaGGGAGATCCTGGAGTCGGT | + |
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Preference number: 4 (lower is better) Translates to: VPSGAASVRHASLYRLLTPSWRR*GDPGVG Trigger: ACCGACTCCAGGATCTCCCCAGCGTCTCCAGCTGGG...AGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| CDS-3UTR CCA 90 bp | GGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACCAAGCGGTGCTGCCTCATCACTACAGAAAGGCTaGCACCCTGGCCTGACCGCA | + |
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Preference number: 4 (lower is better) Translates to: GPMVLVGGRQHVPSGAASSLQKG*HPGLTA Trigger: TGCGGTCAGGCCAGGGTGCCAGCCTTTCTGTAGTGA...TGAGGCAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| CDS-3UTR CCA 90 bp | ACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTTACGAAAGCCGAAGAGATaGGGGTGCAGGTCCCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: TKRCCLSEARVSVQAAHLRKPKR*GCRSPP Trigger: TGGCGGGGACCTGCACCCCCATCTCTTCGGCTTTCG...TAAGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| CDS-3UTR TCA 90 bp | ATGGTCCTGGTGGGAGGACGGCAGCACGTACCAAGCGGTGCTGCCTCAGTGAGGCGTGTGCACTGTTCATaGCAAGGTGGAGGTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: MVLVGGRQHVPSGAASVRRVHCS*QGGGSA Trigger: TGCAGAACCTCCACCTTGTCATGAACAGTGCACACG...CCTCACTGAGGCAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| CDS-3UTR CCA 90 bp | GCACGTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTATTAGGACTCCCAGCTaGAGACGCTGGGGAGATCCT | + |
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Preference number: 4 (lower is better) Translates to: ARTKRCCLSEARVSVQAAIRTPS*RRWGDP Trigger: AGGATCTCCCCAGCGTCTCCAGCTGGGAGTCCTAAT...AGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTACGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| CDS-3UTR TCA 90 bp | GCACGTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTTCCCAGTGGGTGCCTTaGGGCTTCCTTTGGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ARTKRCCLSEARVSVQAASQWVP*GFLWVN Trigger: ATTTACCCAAAGGAAGCCTCAAGGCACCCACTGGGA...AGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTACGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR GCA 90 bp | GCACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACTCTAGTCCCAGTGGGTaGCTTGAGGCTTCCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQCVTLVLWSWWEDGSTYSSPSG*LEASFG Trigger: CCCAAAGGAAGCCTCAAGGCACCCACTGGGACTAGA...GTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | ACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACCATCACTACAGAAAGGCTaGCACCCTGGCCTGACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVCDLGPMVLVGGRQHVPSLQKG*HPGLTA Trigger: TGCGGTCAGGCCAGGGTGCCAGCCTTTCTGTAGTGA...TGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | GCACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACTCCCAGTGGGTGCCTTaGGGCTTCCTTTGGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AQCVTLVLWSWWEDGSTYSQWVP*GFLWVN Trigger: ATTTACCCAAAGGAAGCCTCAAGGCACCCACTGGGA...GTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR GCA 90 bp | ACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTTATCTAGTCCCAGTGGGTaGCTTGAGGCTTCCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKRCCLSEARVSVQAAHLSSPSG*LEASFG Trigger: CCCAAAGGAAGCCTCAAGGCACCCACTGGGACTAGA...TAAGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR GCA 90 bp | CAGCACGTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGATGAGCTGCAAAGTCTaGATTAGGACTCCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QHVPSGAASVRHASLYRLMSCKV*IRTPSW Trigger: CCAGCTGGGAGTCCTAATGCAGACTTTGCAGCTCAT...CAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTACGTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCAGCCCAAAGAGCTGCCCAGCTGGAGACGCTaGGGAGATCCTGGAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: AAYVLPVLQKPASQPKELPSWRR*GDPGVG Trigger: ACCGACTCCAGGATCTCCCCAGCGTCTCCAGCTGGG...CAGCTCTTTGGGCTGGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | CAGCACGTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGACTGACTCGAGGTCATaGAAGTCACTCTCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QHVPSGAASVRHASLYRLTDSRS*KSLSSL Trigger: CAAGGAGGAGAGTGACTTCCATGACCTCGAGTCAGT...CAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTACGTGCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCAGCCCAAAGAGCTGGAAAGGCTGGCACCCTaGCCTGACCGCAGGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AAYVLPVLQKPASQPKELERLAP*PDRRAS Trigger: TGAAGCCCTGCGGTCAGGCCAGGGTGCCAGCCTTTC...CAGCTCTTTGGGCTGGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | ACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACCAGGGACATGCCAGCTCTaGCGAGTTGGAGAAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVCDLGPMVLVGGRQHVPGTCQL*RVGEKG Trigger: TCCTTTTTCTCCAACTCGTCAGAGCTGGCATGTCCC...TGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | ACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTTACGTGTGCACTGTTCATaGCAAGGTGGAGGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKRCCLSEARVSVQAAHLRVHCS*QGGGSA Trigger: TGCAGAACCTCCACCTTGTCATGAACAGTGCACACG...TAAGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | GCTTTGCACTGTGCACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACATTAGGACTCCCAGCTaGAGACGCTGGGGAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALHCAQCVTLVLWSWWEDIRTPS*RRWGDP Trigger: AGGATCTCCCCAGCGTCTCCAGCTGGGAGTCCTAAT...GTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGCACAGTGCAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| 3UTR CAA 72 bp | GTGTATGAAGCTTTGCACTGTGCACAGTGTGTGACCTaGGTCCTATGGTCCTGGTGGGAGGACGGCAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: VYEALHCAQCVT*VLWSWWEDGST Trigger: CGTGCTGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGCACAGTGCAAAGCTTCATACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | GCTTTGCACTGTGCACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACTCCCAGTGGGTGCCTTaGGGCTTCCTTTGGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALHCAQCVTLVLWSWWEDSQWVP*GFLWVN Trigger: ATTTACCCAAAGGAAGCCTCAAGGCACCCACTGGGA...GTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGCACAGTGCAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | GGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACCAAGCGGTGCTGCCTCATTTGAGAGCTGGGCCTaGAGCAAATTTATTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GPMVLVGGRQHVPSGAASFESWA*SKFISC Trigger: ACAGGAAATAAATTTGCTTCAGGCCCAGCTCTCAAA...TGAGGCAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR GCA 90 bp | GTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTCAGCTGCTTTATGGATaGGTGTGCACTGTTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VPSGAASVRHASLYRLLTQLLYG*VCTVHD Trigger: GTCATGAACAGTGCACACGCATCCATAAAGCAGCTG...AGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | GCACAGCACAGGGAGCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCATTAGGACTCCCAGCTaGAGACGCTGGGGAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AQHRELLMSCLSFKNQPAIRTPS*RRWGDP Trigger: AGGATCTCCCCAGCGTCTCCAGCTGGGAGTCCTAAT...GGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGCTCCCTGTGCTGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | ACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTTAACTGACTCGAGGTCATaGAAGTCACTCTCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TKRCCLSEARVSVQAAHLTDSRS*KSLSSL Trigger: CAAGGAGGAGAGTGACTTCCATGACCTCGAGTCAGT...TAAGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | GCACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACCCTAGGGATTCTTCATaGGCTGCAAAGTCTGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: AQCVTLVLWSWWEDGSTYPRDSS*AAKSAL Trigger: TAATGCAGACTTTGCAGCTCATGAAGAATCCCTAGG...GTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | GGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACCAAGCGGTGCTGCCTCATTCAGCTTCAAGACATaGTTTTCTGCTTTTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPMVLVGGRQHVPSGAASFSFKT*FSAFTA Trigger: GGCTGTAAAAGCAGAAAATCATGTCTTGAAGCTGAA...TGAGGCAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | ATGGTCCTGGTGGGAGGACGGCAGCACGTACCAAGCGGTGCTGCCTCAGTGAGGTTCAGCTTCAAGACATaGTTTTCTGCTTTTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MVLVGGRQHVPSGAASVRFSFKT*FSAFTA Trigger: GGCTGTAAAAGCAGAAAATCATGTCTTGAAGCTGAA...CCTCACTGAGGCAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | GCACGTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCTCTTTGAAGGAGAATaGATTGGCTTCTTCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ARTKRCCLSEARVSVQAALFEGE*IGFFKV Trigger: GACCTTGAAGAAGCCAATCCATTCTCCTTCAAAGAG...AGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTACGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | GTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTCTGATCCACGGCAGATaGCAAGTAGGTTATATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPSGAASVRHASLYRLLTLIHGR*QVGYIP Trigger: TGGAATATAACCTACTTGCCATCTGCCGTGGATCAG...AGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | GCATCAAAATCGACAGCCCCAAATGGCTTTCCAAAGCTGACAGCACACAGTAGAGAAAGGCTGGCACCCTaGCCTGACCGCAGGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASKSTAPNGFPKLTAHSRERLAP*PDRRAS Trigger: TGAAGCCCTGCGGTCAGGCCAGGGTGCCAGCCTTTC...TCTACTGTGTGCTGTCAGCTTTGGAAAGCCATTTGGGGCTGTCGATTTTGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | ACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACCACCTAGGGATTCTTCATaGGCTGCAAAGTCTGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: TVCDLGPMVLVGGRQHVPPRDSS*AAKSAL Trigger: TAATGCAGACTTTGCAGCTCATGAAGAATCCCTAGG...TGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | GCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCAGCCCAAAGAGCTGCGTGTGCACTGTTCATaGCAAGGTGGAGGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAYVLPVLQKPASQPKELRVHCS*QGGGSA Trigger: TGCAGAACCTCCACCTTGTCATGAACAGTGCACACG...CAGCTCTTTGGGCTGGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR GCA 90 bp | GCTTTGCACTGTGCACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACCAGCTGCTTTATGGATaGGTGTGCACTGTTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALHCAQCVTLVLWSWWEDQLLYG*VCTVHD Trigger: GTCATGAACAGTGCACACGCATCCATAAAGCAGCTG...GTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGCACAGTGCAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | GCACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACTTCAGCTTCAAGACATaGTTTTCTGCTTTTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQCVTLVLWSWWEDGSTYFSFKT*FSAFTA Trigger: GGCTGTAAAAGCAGAAAATCATGTCTTGAAGCTGAA...GTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCAGCCCAAAGAGCTGATGAGCTGCAAAGTCTaGATTAGGACTCCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAYVLPVLQKPASQPKELMSCKV*IRTPSW Trigger: CCAGCTGGGAGTCCTAATGCAGACTTTGCAGCTCAT...CAGCTCTTTGGGCTGGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR GCA 90 bp | GCACAGCACAGGGAGCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCCAGCTGCTTTATGGATaGGTGTGCACTGTTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: AQHRELLMSCLSFKNQPAQLLYG*VCTVHD Trigger: GTCATGAACAGTGCACACGCATCCATAAAGCAGCTG...GGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGCTCCCTGTGCTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | ACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTTACTCTTTGAAGGAGAATaGATTGGCTTCTTCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKRCCLSEARVSVQAAHLLFEGE*IGFFKV Trigger: GACCTTGAAGAAGCCAATCCATTCTCCTTCAAAGAG...TAAGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | ACAGCCCCAAATGGCTTTCCAAAGCTGACAGCACACAGTAGAGGGTGTATGAAGGGGACATGCCAGCTCTaGCGAGTTGGAGAAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAPNGFPKLTAHSRGCMKGTCQL*RVGEKG Trigger: TCCTTTTTCTCCAACTCGTCAGAGCTGGCATGTCCC...CTTCATACACCCTCTACTGTGTGCTGTCAGCTTTGGAAAGCCATTTGGGGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR GCA 90 bp | GCATCAAAATCGACAGCCCCAAATGGCTTTCCAAAGCTGACAGCACACAGTAGATCTAGTCCCAGTGGGTaGCTTGAGGCTTCCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASKSTAPNGFPKLTAHSRSSPSG*LEASFG Trigger: CCCAAAGGAAGCCTCAAGGCACCCACTGGGACTAGA...TCTACTGTGTGCTGTCAGCTTTGGAAAGCCATTTGGGGCTGTCGATTTTGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | GCTTTGCACTGTGCACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACCTCTTTGAAGGAGAATaGATTGGCTTCTTCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALHCAQCVTLVLWSWWEDLFEGE*IGFFKV Trigger: GACCTTGAAGAAGCCAATCCATTCTCCTTCAAAGAG...GTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGCACAGTGCAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | GCATCAAAATCGACAGCCCCAAATGGCTTTCCAAAGCTGACAGCACACAGTAGAGGGACATGCCAGCTCTaGCGAGTTGGAGAAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASKSTAPNGFPKLTAHSRGTCQL*RVGEKG Trigger: TCCTTTTTCTCCAACTCGTCAGAGCTGGCATGTCCC...TCTACTGTGTGCTGTCAGCTTTGGAAAGCCATTTGGGGCTGTCGATTTTGATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | AATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATCGACAGCCAGGCCATATCCCATaGGCTGGGAGGCAGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NCTIQKAHKHINVHQNRQPGHIP*AGRQGS Trigger: GCTCCCCTGCCTCCCAGCTCATGGGATATGGCCTGG...CTGTCGATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | GCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCAGCCCAAAGAGCTGTTTGAGAGCTGGGCCTaGAGCAAATTTATTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AAYVLPVLQKPASQPKELFESWA*SKFISC Trigger: ACAGGAAATAAATTTGCTTCAGGCCCAGCTCTCAAA...CAGCTCTTTGGGCTGGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | GCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCAGCCCAAAGAGCTGTTCAGCTTCAAGACATaGTTTTCTGCTTTTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AAYVLPVLQKPASQPKELFSFKT*FSAFTA Trigger: GGCTGTAAAAGCAGAAAATCATGTCTTGAAGCTGAA...CAGCTCTTTGGGCTGGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | AATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATCGACAGGAAAGGCTGGCACCCTaGCCTGACCGCAGGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NCTIQKAHKHINVHQNRQERLAP*PDRRAS Trigger: TGAAGCCCTGCGGTCAGGCCAGGGTGCCAGCCTTTC...CTGTCGATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | ACAGCCCCAAATGGCTTTCCAAAGCTGACAGCACACAGTAGAGGGTGTATGAAGTTTGAGAGCTGGGCCTaGAGCAAATTTATTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TAPNGFPKLTAHSRGCMKFESWA*SKFISC Trigger: ACAGGAAATAAATTTGCTTCAGGCCCAGCTCTCAAA...CTTCATACACCCTCTACTGTGTGCTGTCAGCTTTGGAAAGCCATTTGGGGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR GCA 90 bp | AGTCTGAATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATGAGGCAGGGGAGCTGTaGTCTAGTCCCAGTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLNCTIQKAHKHINVHQNEAGEL*SSPSGC Trigger: GCACCCACTGGGACTAGAGCACAGCTCCCCTGCCTC...ATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATTCAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | AATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATCGACAGACGCTGGGGAGATCCTaGAGTCGGTGTCACTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: NCTIQKAHKHINVHQNRQTLGRS*SRCHSA Trigger: CGCTGAGTGACACCGACTCCAGGATCTCCCCAGCGT...CTGTCGATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | AGTCTGAATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATCCCAGCTGGAGACGCTaGGGAGATCCTGGAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLNCTIQKAHKHINVHQNPSWRR*GDPGVG Trigger: ACCGACTCCAGGATCTCCCCAGCGTCTCCAGCTGGG...ATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATTCAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | AGTCTGAATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATGAAAGGCTGGCACCCTaGCCTGACCGCAGGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLNCTIQKAHKHINVHQNERLAP*PDRRAS Trigger: TGAAGCCCTGCGGTCAGGCCAGGGTGCCAGCCTTTC...ATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATTCAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | AGTCTGAATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATCGAAAGCCGAAGAGATaGGGGTGCAGGTCCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLNCTIQKAHKHINVHQNRKPKR*GCRSPP Trigger: TGGCGGGGACCTGCACCCCCATCTCTTCGGCTTTCG...ATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATTCAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| 3UTR CAA 72 bp | GCCCGACCTCGTCCTAGAGAGGGTGGTGAAAGAAGCTaGTTACAAAACTGTCGTTTCAGCTTTAGTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ARPRPREGGERS*LQNCRFSFSGF Trigger: AAAACCACTAAAGCTGAAACGACAGTTTTGTAACAAGCTTCTTTCACCACCCTCTCTAGGACGAGGTCGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | AGTCTGAATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATTCACTACAGAAAGGCTaGCACCCTGGCCTGACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLNCTIQKAHKHINVHQNSLQKG*HPGLTA Trigger: TGCGGTCAGGCCAGGGTGCCAGCCTTTCTGTAGTGA...ATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATTCAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | AATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATCGACAGTCCCAGTGGGTGCCTTaGGGCTTCCTTTGGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NCTIQKAHKHINVHQNRQSQWVP*GFLWVN Trigger: ATTTACCCAAAGGAAGCCTCAAGGCACCCACTGGGA...CTGTCGATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | AGTCTGAATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATGGGACATGCCAGCTCTaGCGAGTTGGAGAAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLNCTIQKAHKHINVHQNGTCQL*RVGEKG Trigger: TCCTTTTTCTCCAACTCGTCAGAGCTGGCATGTCCC...ATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATTCAGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | AATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATCGACAGACTGACTCGAGGTCATaGAAGTCACTCTCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NCTIQKAHKHINVHQNRQTDSRS*KSLSSL Trigger: CAAGGAGGAGAGTGACTTCCATGACCTCGAGTCAGT...CTGTCGATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR GCA 90 bp | AGTCTGAATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATATGAGCTGCAAAGTCTaGATTAGGACTCCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLNCTIQKAHKHINVHQNMSCKV*IRTPSW Trigger: CCAGCTGGGAGTCCTAATGCAGACTTTGCAGCTCAT...ATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATTCAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR GCA 90 bp | AATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATCGACAGCAGCTGCTTTATGGATaGGTGTGCACTGTTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: NCTIQKAHKHINVHQNRQQLLYG*VCTVHD Trigger: GTCATGAACAGTGCACACGCATCCATAAAGCAGCTG...CTGTCGATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | AGTCTGAATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATACTGACTCGAGGTCATaGAAGTCACTCTCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLNCTIQKAHKHINVHQNTDSRS*KSLSSL Trigger: CAAGGAGGAGAGTGACTTCCATGACCTCGAGTCAGT...ATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATTCAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | AGTCTGAATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATCCTAGGGATTCTTCATaGGCTGCAAAGTCTGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: SLNCTIQKAHKHINVHQNPRDSS*AAKSAL Trigger: TAATGCAGACTTTGCAGCTCATGAAGAATCCCTAGG...ATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATTCAGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR TCA 90 bp | AGTCTGAATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATTTTGAGAGCTGGGCCTaGAGCAAATTTATTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLNCTIQKAHKHINVHQNFESWA*SKFISC Trigger: ACAGGAAATAAATTTGCTTCAGGCCCAGCTCTCAAA...ATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATTCAGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CCA 90 bp | AGTCTGAATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATCTCTTTGAAGGAGAATaGATTGGCTTCTTCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLNCTIQKAHKHINVHQNLFEGE*IGFFKV Trigger: GACCTTGAAGAAGCCAATCCATTCTCCTTCAAAGAG...ATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATTCAGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | CAGCACGTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGGCCTTGAGGCTTCCTTaGGGTAAATTCGGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QHVPSGAASVRHASLYRLALRLP*GKFGWW Trigger: CCACCAGCCGAATTTACCCAAAGGAAGCCTCAAGGC...CAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTACGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | ATGGTCCTGGTGGGAGGACGGCAGCACGTACCAAGCGGTGCTGCCTCAGTGAGGTTTCTCGCCTCAAGTTaGAGAGCTGGGCCTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: MVLVGGRQHVPSGAASVRFLASS*RAGPEA Trigger: TGCTTCAGGCCCAGCTCTCAAACTTGAGGCGAGAAA...CCTCACTGAGGCAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | ACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTTAGCCTTGAGGCTTCCTTaGGGTAAATTCGGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TKRCCLSEARVSVQAAHLALRLP*GKFGWW Trigger: CCACCAGCCGAATTTACCCAAAGGAAGCCTCAAGGC...TAAGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | GCACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACTTTCTCGCCTCAAGTTaGAGAGCTGGGCCTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AQCVTLVLWSWWEDGSTYFLASS*RAGPEA Trigger: TGCTTCAGGCCCAGCTCTCAAACTTGAGGCGAGAAA...GTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | GTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTTTTCTCGCCTCAAGTTaGAGAGCTGGGCCTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPSGAASVRHASLYRLLTFLASS*RAGPEA Trigger: TGCTTCAGGCCCAGCTCTCAAACTTGAGGCGAGAAA...AGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | GCTTTGCACTGTGCACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACGCCTTGAGGCTTCCTTaGGGTAAATTCGGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ALHCAQCVTLVLWSWWEDALRLP*GKFGWW Trigger: CCACCAGCCGAATTTACCCAAAGGAAGCCTCAAGGC...GTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGCACAGTGCAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | GTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTAAGTCACTCTCCTCCTaGATCATCTTCGCCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VPSGAASVRHASLYRLLTKSLSS*IIFASN Trigger: GTTGGAGGCGAAGATGATCAAGGAGGAGAGTGACTT...AGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | ACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACGGCAGCACGTACCAAAGTCACTCTCCTCCTaGATCATCTTCGCCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TVCDLGPMVLVGGRQHVPKSLSS*IIFASN Trigger: GTTGGAGGCGAAGATGATCAAGGAGGAGAGTGACTT...TGGTACGTGCTGCCGTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | ATGGTCCTGGTGGGAGGACGGCAGCACGTACCAAGCGGTGCTGCCTCAGTGAGGATTCTGTCGATAGACTaGAGGATTTCAGCAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: MVLVGGRQHVPSGAASVRILSID*RISATR Trigger: CCTTGTTGCTGAAATCCTCAAGTCTATCGACAGAAT...CCTCACTGAGGCAGCACCGCTTGGTACGTGCTGCCGTCCTCCCACCAGGACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | GCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCAGCCCAAAGAGCTGGCCTTGAGGCTTCCTTaGGGTAAATTCGGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AAYVLPVLQKPASQPKELALRLP*GKFGWW Trigger: CCACCAGCCGAATTTACCCAAAGGAAGCCTCAAGGC...CAGCTCTTTGGGCTGGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | GCTTTGCACTGTGCACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACAAGTCACTCTCCTCCTaGATCATCTTCGCCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ALHCAQCVTLVLWSWWEDKSLSS*IIFASN Trigger: GTTGGAGGCGAAGATGATCAAGGAGGAGAGTGACTT...GTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGCACAGTGCAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | CAGCACGTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGATTCTGTCGATAGACTaGAGGATTTCAGCAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QHVPSGAASVRHASLYRLILSID*RISATR Trigger: CCTTGTTGCTGAAATCCTCAAGTCTATCGACAGAAT...CAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTACGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | GTACCAAGCGGTGCTGCCTCAGTGAGGCACGCGTCTCTGTACAGGCTGCTCACTGACAGGCTGAGGTTCTaGGTTTTCAAAAACTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VPSGAASVRHASLYRLLTDRLRF*VFKNSL Trigger: CAAAGAGTTTTTGAAAACCAAGAACCTCAGCCTGTC...AGTGAGCAGCCTGTACAGAGACGCGTGCCTCACTGAGGCAGCACCGCTTGGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | GCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCAGCCCAAAGAGCTGTTTCTCGCCTCAAGTTaGAGAGCTGGGCCTGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AAYVLPVLQKPASQPKELFLASS*RAGPEA Trigger: TGCTTCAGGCCCAGCTCTCAAACTTGAGGCGAGAAA...CAGCTCTTTGGGCTGGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | GCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCAGCCCAAAGAGCTGAAGTCACTCTCCTCCTaGATCATCTTCGCCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: AAYVLPVLQKPASQPKELKSLSS*IIFASN Trigger: GTTGGAGGCGAAGATGATCAAGGAGGAGAGTGACTT...CAGCTCTTTGGGCTGGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | GCTTTGCACTGTGCACAGTGTGTGACCTTGGTCCTATGGTCCTGGTGGGAGGACTTGAAGGAGAATGGATaGGCTTCTTCAAGGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ALHCAQCVTLVLWSWWEDLKENG*ASSRSS Trigger: TGAAGACCTTGAAGAAGCCAATCCATTCTCCTTCAA...GTCCTCCCACCAGGACCATAGGACCAAGGTCACACACTGTGCACAGTGCAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | GCACAGCACAGGGAGCTGCTTATGTCTTGCCTGTCCTTCAAAAACCAGCCAGCCATTCTGTCGATAGACTaGAGGATTTCAGCAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AQHRELLMSCLSFKNQPAILSID*RISATR Trigger: CCTTGTTGCTGAAATCCTCAAGTCTATCGACAGAAT...GGCTGGCTGGTTTTTGAAGGACAGGCAAGACATAAGCAGCTCCCTGTGCTGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | ACAGCCCCAAATGGCTTTCCAAAGCTGACAGCACACAGTAGAGGGTGTATGAAGTCAAGGTCTTCAAGTTaGTCACCGTCGGGAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: TAPNGFPKLTAHSRGCMKSRSSS*SPSGTT Trigger: TGTGGTTCCCGACGGTGACAAACTTGAAGACCTTGA...CTTCATACACCCTCTACTGTGTGCTGTCAGCTTTGGAAAGCCATTTGGGGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077983.13 |
||
| CDS GCA 90 bp | TCTGTCGATAGACTTGAGGATTTCAGCAACAAGGTTCAGTGTGTCTaGCCCAGACACCAGCTGCTTTATGGATGCGTGTGCACTGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SVDRLEDFSNKVQCV*PRHQLLYGCVCTVH Trigger: ATGAACAGTGCACACGCATCCATAAAGCAGCTGGTGTCTGGGGCAGACACACTGAACCTTGTTGCTGAAATCCTCAAGTCTATCGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | GCATCAAAATCGACAGCCCCAAATGGCTTTCCAAAGCTGACAGCACACAGTAGATTGAAGGAGAATGGATaGGCTTCTTCAAGGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASKSTAPNGFPKLTAHSRLKENG*ASSRSS Trigger: TGAAGACCTTGAAGAAGCCAATCCATTCTCCTTCAA...TCTACTGTGTGCTGTCAGCTTTGGAAAGCCATTTGGGGCTGTCGATTTTGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | AATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATCGACAGTTGAAGGAGAATGGATaGGCTTCTTCAAGGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NCTIQKAHKHINVHQNRQLKENG*ASSRSS Trigger: TGAAGACCTTGAAGAAGCCAATCCATTCTCCTTCAA...CTGTCGATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | AATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATCGACAGATTCTGTCGATAGACTaGAGGATTTCAGCAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: NCTIQKAHKHINVHQNRQILSID*RISATR Trigger: CCTTGTTGCTGAAATCCTCAAGTCTATCGACAGAAT...CTGTCGATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS-3UTR CAA 90 bp | AGTCTGAATTGCACTATACAAAAGGCACACAAACACATTAACGTGCATCAAAATTTGAAGGAGAATGGATaGGCTTCTTCAAGGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLNCTIQKAHKHINVHQNLKENG*ASSRSS Trigger: TGAAGACCTTGAAGAAGCCAATCCATTCTCCTTCAA...ATTTTGATGCACGTTAATGTGTTTGTGTGCCTTTTGTATAGTGCAATTCAGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
||
| CDS GCA 72 bp | AGGCCATATCCCATGAGCTGGGAGGCAGGGGAGCTGTaGTCTAGTCCCAGTGGGTGCCTTGAGGCTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: RPYPMSWEAGEL*SSPSGCLEASF Trigger: AAAGGAAGCCTCAAGGCACCCACTGGGACTAGAGCACAGCTCCCCTGCCTCCCAGCTCATGGGATATGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 ENSMUST00000139738.2 |
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| CDS CAA 72 bp | AGGCAGGGGAGCTGTGCTCTAGTCCCAGTGGGTGCCTaGAGGCTTCCTTTGGGTAAATTCGGCTGGTGGTCG | + |
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Preference number: 6 (lower is better) Translates to: RQGSCALVPVGA*RLPLGKFGWWS Trigger: CGACCACCAGCCGAATTTACCCAAAGGAAGCCTCAAGGCACCCACTGGGACTAGAGCACAGCTCCCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 ENSMUST00000139738.2 |
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| CDS TCA 72 bp | CAGCGTTTGTCCAGGGAGGTGAAGACCGCAGACGCCTaGCTCCCACTGAGTCTGGGACTAGAAAGCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: QRLSREVKTADA*LPLSLGLESCL Trigger: AAGACAGCTTTCTAGTCCCAGACTCAGTGGGAGTCAGGCGTCTGCGGTCTTCACCTCCCTGGACAAACGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139738.2 |
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| CDS CAA 72 bp | TGTGCTCTAGTCCCAGTGGGTGCCTTGAGGCTTCCTTaGGGTAAATTCGGCTGGTGGTCGTGTCTTCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: CALVPVGALRLP*GKFGWWSCLLL Trigger: CAAAAGAAGACACGACCACCAGCCGAATTTACCCAAAGGAAGCCTCAAGGCACCCACTGGGACTAGAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 ENSMUST00000139738.2 |
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| CDS GCA 72 bp | AGACTTGAGGATTTCAGCAACAAGGTTCAGTGTGTCTaGCCCAGACACCAGCTGCTTTATGGATGCGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: RLEDFSNKVQCV*PRHQLLYGCVC Trigger: GCACACGCATCCATAAAGCAGCTGGTGTCTGGGGCAGACACACTGAACCTTGTTGCTGAAATCCTCAAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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| CDS CAA 72 bp | ACTACTGACTCGAGGTCATGGAAGTCACTCTCCTCCTaGATCATCTTCGCCTCCAACTTCCGTTCGAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: TTDSRSWKSLSS*IIFASNFRSSV Trigger: GACACTCGAACGGAAGTTGGAGGCGAAGATGATCAAGGAGGAGAGTGACTTCCATGACCTCGAGTCAGTAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028293.12 ENSMUST00000077983.13 ENSMUST00000114100.10 ENSMUST00000114102.10 |
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