Pregenerated sensors for ENTPD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021236Ensembl transcript IDs: ENSMUST00000021662.12, ENSMUST00000072061.12, ENSMUST00000110272.9, ENSMUST00000117286.2, ENSMUST00000120942.8, ENSMUST00000122194.8
Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CATGAGCATAACAGCTCACTCCTGCAAGCCCAAGGTTCAGGAGGCTaGGGCGGGAGAATTGGTAATTCAAGGCAACCTGGGTTACATACT | + |
Preference number: 1 (lower is better) Translates to: HEHNSSLLQAQGSGG*GGRIGNSRQPGLHT Trigger: AGTATGTAACCCAGGTTGCCTTGAATTACCAATTCTCCCGCCTCAGCCTCCTGAACCTTGGGCTTGCAGGAGTGAGCTGTTATGCTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR TCA 90 bp | TGTGTGTGTACTGCAAAGTGCCAAAGAGGCCTCCAGAAGAGACCCTaGGCTGTGTTAGATAACAACACTACAGAAACGGCATGCCCAGCA | + |
Preference number: 1 (lower is better) Translates to: CVCTAKCQRGLQKRP*AVLDNNTTETACPA Trigger: TGCTGGGCATGCCGTTTCTGTAGTGTTGTTATCTAACACAGCTCAGGGTCTCTTCTGGAGGCCTCTTTGGCACTTTGCAGTACACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR TCA 90 bp | CCTCGCATGCATGACCTGTGTTCAACCACAACCCAGAAAACGTCCTaGGAGAGAAAACATGGTTCTCTAATGCTACTCACTGTCCTGACC | + |
Preference number: 1 (lower is better) Translates to: PRMHDLCSTTTQKTS*ERKHGSLMLLTVLT Trigger: GGTCAGGACAGTGAGTAGCATTAGAGAACCATGTTTTCTCTCTCAGGACGTTTTCTGGGTTGTGGTTGAACACAGGTCATGCATGCGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR GCA 90 bp | CTAGGCAGGAAAGCAGGACTATACAAGCATAGTGCTAGCACATTGTaGTTAACATTCAAGAAGTCCTGGGTTCGATTCCCAGCACTTTCC | + |
Preference number: 1 (lower is better) Translates to: LGRKAGLYKHSASTL*LTFKKSWVRFPALS Trigger: GGAAAGTGCTGGGAATCGAACCCAGGACTTCTTGAATGTTAAGCACAATGTGCTAGCACTATGCTTGTATAGTCCTGCTTTCCTGCCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR TCA 90 bp | GATCTTTCAGGTAATGACTTTAAAGAGCTAAATAATGCAGTAGAGTaGGTACCCATGCCTCGCATGCATGACCTGTGTTCAACCACAACC | + |
Preference number: 1 (lower is better) Translates to: DLSGNDFKELNNAVE*VPMPRMHDLCSTTT Trigger: GGTTGTGGTTGAACACAGGTCATGCATGCGAGGCATGGGTACTCACTCTACTGCATTATTTAGCTCTTTAAAGTCATTACCTGAAAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR CAA 90 bp | GCTCACTCCTGCAAGCCCAAGGTTCAGGAGGCTGAGGCGGGAGAATaGGTAATTCAAGGCAACCTGGGTTACATACTGAGTTCCAGGCCA | + |
Preference number: 2 (lower is better) Translates to: AHSCKPKVQEAEAGE*VIQGNLGYILSSRP Trigger: TGGCCTGGAACTCAGTATGTAACCCAGGTTGCCTTGAATTACCAATTCTCCCGCCTCAGCCTCCTGAACCTTGGGCTTGCAGGAGTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR GCA 90 bp | CCAGTAATAAAACAATACACGATCTCATCGCACGCACAGCTGCAGAGGCCTCAGAAGAGGAGGGCAAAGTaGTGTGACAGGAGCCAAGCG | + |
Preference number: 2 (lower is better) Translates to: PVIKQYTISSHAQLQRPQKRRAK*CDRSQA Trigger: CGCTTGGCTCCTGTCACAGCACTTTGCCCTCCTCTT...CTGAGGCCTCTGCAGCTGTGCGTGCGATGAGATCGTGTATTGTTTTATTACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR TCA 90 bp | AACAATACACACTTTATAGCTAGGGCCCCTGTGTCTGAGGTGTCAGAGACCAGCACCTGGGTTACATACTaGGTTCCAGGCCAGCCTGAA | + |
Preference number: 2 (lower is better) Translates to: NNTHFIARAPVSEVSETSTWVTY*VPGQPE Trigger: TTCAGGCTGGCCTGGAACTCAGTATGTAACCCAGGT...GCTGGTCTCTGACACCTCAGACACAGGGGCCCTAGCTATAAAGTGTGTATTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR CAA 90 bp | GCACAGGTCCTCCTTGTGTGGCTGAGTGCTTCATTATTTGGGGTTTaGAAGTGTGTGTGTACTGCAAAGTGCCAAAGAGGCCTCCAGAAG | + |
Preference number: 2 (lower is better) Translates to: AQVLLVWLSASLFGV*KCVCTAKCQRGLQK Trigger: CTTCTGGAGGCCTCTTTGGCACTTTGCAGTACACACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCACACAAGGAGGACCTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR GCA 90 bp | AAACGAGATTGTTCTTTGGTCCCCAGGGACCTGTCTCTGAACTCGCAATCTAGCAGATTTACAGTCTGGTaGCAGCCATGCACCCACCAA | + |
Preference number: 2 (lower is better) Translates to: KRDCSLVPRDLSLNSQSSRFTVW*QPCTHQ Trigger: TTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCT...GCTAGATTGCGAGTTCAGAGACAGGTCCCTGGGGACCAAAGAACAATCTCGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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3UTR-3UTR GCA 90 bp | CTGTGGAACAATACACACTTTATAGCTAGGGCCCCTGTGTCTGAGGTGTCAGAGAACTTGCAGTCCTCCTaGCTCAGCTTCAAGGTAGCT | + |
Preference number: 2 (lower is better) Translates to: LWNNTHFIARAPVSEVSENLQSS*LSFKVA Trigger: AGCTACCTTGAAGCTGAGGCAGGAGGACTGCAAGTT...CTCTGACACCTCAGACACAGGGGCCCTAGCTATAAAGTGTGTATTGTTCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR CCA 90 bp | GTCCCCAGGGACCTGTCTCTGAACTCGCAATCTAGCATGGAGTTCCAAACCTTTAAAAGATTTACAGTCTaGTGCCAGCCATGCACCCAC | + |
Preference number: 2 (lower is better) Translates to: VPRDLSLNSQSSMEFQTFKRFTV*CQPCTH Trigger: GTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTT...AAAGGTTTGGAACTCCATGCTAGATTGCGAGTTCAGAGACAGGTCCCTGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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3UTR-3UTR CCA 90 bp | CCAGTAATAAAACAATACACGATCTCATCGCACGCACAGCTGCAGAGGCCTCAGAACGAGATTGTTCTTTaGTCCCCAGGGACCTGTCTC | + |
Preference number: 2 (lower is better) Translates to: PVIKQYTISSHAQLQRPQNEIVL*SPGTCL Trigger: GAGACAGGTCCCTGGGGACCAAAGAACAATCTCGTT...CTGAGGCCTCTGCAGCTGTGCGTGCGATGAGATCGTGTATTGTTTTATTACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR CCA 90 bp | CTGTGGAACAATACACACTTTATAGCTAGGGCCCCTGTGTCTGAGGTGTCAGAGGAAAACTTCCTGGGCTaGAAAGAGAAGAGGAGGGCA | + |
Preference number: 2 (lower is better) Translates to: LWNNTHFIARAPVSEVSEENFLG*KEKRRA Trigger: TGCCCTCCTCTTCTCTTTCCAGCCCAGGAAGTTTTC...CTCTGACACCTCAGACACAGGGGCCCTAGCTATAAAGTGTGTATTGTTCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR TCA 90 bp | CAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGGTCCACGCCTTCCTGTaGGAAAACTGTTCAGAAATG | + |
Preference number: 2 (lower is better) Translates to: QRIPKDLQSGASHAPTKWVHAFL*ENCSEM Trigger: CATTTCTGAACAGTTTTCTCACAGGAAGGCGTGGAC...CCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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3UTR-3UTR GCA 90 bp | CCAGTTAACGGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAAAACTGTTCAGAAATaGAGGCTTCAGAGGTGGAGC | + |
Preference number: 2 (lower is better) Translates to: PVNGFRARLFQRGQKMSLKTVQK*RLQRWS Trigger: GCTCCACCTCTGAAGCCTGCATTTCTGAACAGTTTT...CAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCCGTTAACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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3UTR-3UTR GCA 90 bp | CAGGTCCTCCTTGTGTGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGAGATTTACAGTCTGGTaGCAGCCATGCACCCACCAA | + |
Preference number: 2 (lower is better) Translates to: QVLLVWLSASLFGVLKCVRFTVW*QPCTHQ Trigger: TTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCT...CACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCACACAAGGAGGACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR GCA 90 bp | CTGTGGAACAATACACACTTTATAGCTAGGGCCCCTGTGTCTGAGGTGTCAGAGAGTGTTGCACTGAGTTaGCCACAGCAAGCCTATAAC | + |
Preference number: 2 (lower is better) Translates to: LWNNTHFIARAPVSEVSESVALS*PQQAYN Trigger: GTTATAGGCTTGCTGTGGGCAACTCAGTGCAACACT...CTCTGACACCTCAGACACAGGGGCCCTAGCTATAAAGTGTGTATTGTTCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR GCA 90 bp | CCAGTAATAAAACAATACACGATCTCATCGCACGCACAGCTGCAGAGGCCTCAGGAAGTGTGTGTGTACTaGAAAGTGCCAAAGAGGCCT | + |
Preference number: 2 (lower is better) Translates to: PVIKQYTISSHAQLQRPQEVCVY*KVPKRP Trigger: AGGCCTCTTTGGCACTTTGCAGTACACACACACTTC...CTGAGGCCTCTGCAGCTGTGCGTGCGATGAGATCGTGTATTGTTTTATTACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR CAA 90 bp | GGCCTAGGCAGGAAAGCAGGACTATACAAGCATAGTGCTAGCACATaGTGCTTAACATTCAAGAAGTCCTGGGTTCGATTCCCAGCACTT | + |
Preference number: 2 (lower is better) Translates to: GLGRKAGLYKHSAST*CLTFKKSWVRFPAL Trigger: AAGTGCTGGGAATCGAACCCAGGACTTCTTGAATGTTAAGCACAATGTGCTAGCACTATGCTTGTATAGTCCTGCTTTCCTGCCTAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR GCA 90 bp | AATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAAAACTGTTCAGAAATaGAGGCTTCAGAGGTGGAGC | + |
Preference number: 2 (lower is better) Translates to: NPKRFTVWCQPCTHQVVRKTVQK*RLQRWS Trigger: GCTCCACCTCTGAAGCCTGCATTTCTGAACAGTTTT...CCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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3UTR-3UTR GCA 90 bp | TACTACACAAACAAAGGAATCTCCAAGATGTTCTCCCTCACTTCACTTGGCAACAAGAGGAGGGCAAAGTaGTGTGACAGGAGCCAAGCG | + |
Preference number: 2 (lower is better) Translates to: YYTNKGISKMFSLTSLGNKRRAK*CDRSQA Trigger: CGCTTGGCTCCTGTCACAGCACTTTGCCCTCCTCTT...GTTGCCAAGTGAAGTGAGGGAGAACATCTTGGAGATTCCTTTGTTTGTGTAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR TCA 90 bp | CATGGTTCTCTAATGCTACTCACTGTCCTGACCTGTACCAATATGGACCAAAATCAAGGTTCAGGAGGCTaGGGCGGGAGAATTGGTAAT | + |
Preference number: 2 (lower is better) Translates to: HGSLMLLTVLTCTNMDQNQGSGG*GGRIGN Trigger: ATTACCAATTCTCCCGCCTCAGCCTCCTGAACCTTG...ATTTTGGTCCATATTGGTACAGGTCAGGACAGTGAGTAGCATTAGAGAACCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR TCA 90 bp | TACTACACAAACAAAGGAATCTCCAAGATGTTCTCCCTCACTTCACTTGGCAACCAAGGTTCAGGAGGCTaGGGCGGGAGAATTGGTAAT | + |
Preference number: 2 (lower is better) Translates to: YYTNKGISKMFSLTSLGNQGSGG*GGRIGN Trigger: ATTACCAATTCTCCCGCCTCAGCCTCCTGAACCTTG...GTTGCCAAGTGAAGTGAGGGAGAACATCTTGGAGATTCCTTTGTTTGTGTAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR TCA 90 bp | TGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGTGTACTGCAAAGTGCGGGGTTCTGAGATCCTaGGCTAGACAACGAATTCAG | + |
Preference number: 2 (lower is better) Translates to: WLSASLFGVLKCVCTAKCGVLRS*ARQRIQ Trigger: CTGAATTCGTTGTCTAGCTCAGGATCTCAGAACCCC...GCACTTTGCAGTACACACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR TCA 90 bp | CAGGTCCTCCTTGTGTGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGACCCAGAAAACGTCCTaGGAGAGAAAACATGGTTCT | + |
Preference number: 2 (lower is better) Translates to: QVLLVWLSASLFGVLKCVTQKTS*ERKHGS Trigger: AGAACCATGTTTTCTCTCTCAGGACGTTTTCTGGGT...CACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCACACAAGGAGGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR GCA 90 bp | CAGGTCCTCCTTGTGTGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGAAAACTGTTCAGAAATaGAGGCTTCAGAGGTGGAGC | + |
Preference number: 2 (lower is better) Translates to: QVLLVWLSASLFGVLKCVKTVQK*RLQRWS Trigger: GCTCCACCTCTGAAGCCTGCATTTCTGAACAGTTTT...CACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCACACAAGGAGGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR GCA 90 bp | AATAAAAGATGGCAGCCGCTGGAAAATGATGATGGCTACAACCTCTCAGGACAAAACTTGCAGTCCTCCTaGCTCAGCTTCAAGGTAGCT | + |
Preference number: 2 (lower is better) Translates to: NKRWQPLENDDGYNLSGQNLQSS*LSFKVA Trigger: AGCTACCTTGAAGCTGAGGCAGGAGGACTGCAAGTT...TTGTCCTGAGAGGTTGTAGCCATCATCATTTTCCAGCGGCTGCCATCTTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR GCA 90 bp | CCAGTAATAAAACAATACACGATCTCATCGCACGCACAGCTGCAGAGGCCTCAGCCTTGTGTGGCTGAGTaGTTCATTATTTGGGGTTTT | + |
Preference number: 2 (lower is better) Translates to: PVIKQYTISSHAQLQRPQPCVAE*FIIWGF Trigger: AAAACCCCAAATAATGAAGCACTCAGCCACACAAGG...CTGAGGCCTCTGCAGCTGTGCGTGCGATGAGATCGTGTATTGTTTTATTACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR CCA 90 bp | TGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGTGTACTGCAAAGTGCAACGAGATTGTTCTTTaGTCCCCAGGGACCTGTCTC | + |
Preference number: 2 (lower is better) Translates to: WLSASLFGVLKCVCTAKCNEIVL*SPGTCL Trigger: GAGACAGGTCCCTGGGGACCAAAGAACAATCTCGTT...GCACTTTGCAGTACACACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR CCA 90 bp | AATAAAAGATGGCAGCCGCTGGAAAATGATGATGGCTACAACCTCTCAGGACAAATAAACACATGGGCTTaGGAGGCAGTGCTGACTGAC | + |
Preference number: 2 (lower is better) Translates to: NKRWQPLENDDGYNLSGQINTWA*EAVLTD Trigger: GTCAGTCAGCACTGCCTCCCAAGCCCATGTGTTTAT...TTGTCCTGAGAGGTTGTAGCCATCATCATTTTCCAGCGGCTGCCATCTTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR TCA 90 bp | CATGGTTCTCTAATGCTACTCACTGTCCTGACCTGTACCAATATGGACCAAAATGGGGTTCTGAGATCCTaGGCTAGACAACGAATTCAG | + |
Preference number: 2 (lower is better) Translates to: HGSLMLLTVLTCTNMDQNGVLRS*ARQRIQ Trigger: CTGAATTCGTTGTCTAGCTCAGGATCTCAGAACCCC...ATTTTGGTCCATATTGGTACAGGTCAGGACAGTGAGTAGCATTAGAGAACCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR TCA 90 bp | ATAAAAGATGGCAGCCGCTGGAAAATGATGATGGCTACAACCTCTCAGGACAAGACCCAGAAAACGTCCTaGGAGAGAAAACATGGTTCT | + |
Preference number: 2 (lower is better) Translates to: IKDGSRWKMMMATTSQDKTQKTS*ERKHGS Trigger: AGAACCATGTTTTCTCTCTCAGGACGTTTTCTGGGT...CTTGTCCTGAGAGGTTGTAGCCATCATCATTTTCCAGCGGCTGCCATCTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR TCA 90 bp | TACTACACAAACAAAGGAATCTCCAAGATGTTCTCCCTCACTTCACTTGGCAACTCCTCCTTGTGTGGCTaGGTGCTTCATTATTTGGGG | + |
Preference number: 2 (lower is better) Translates to: YYTNKGISKMFSLTSLGNSSLCG*VLHYLG Trigger: CCCCAAATAATGAAGCACTCAGCCACACAAGGAGGA...GTTGCCAAGTGAAGTGAGGGAGAACATCTTGGAGATTCCTTTGTTTGTGTAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR TCA 90 bp | AAACATGGTTCTCTAATGCTACTCACTGTCCTGACCTGTACCAATATGGACCAAGTCCACGCCTTCCTGTaGGAAAACTGTTCAGAAATG | + |
Preference number: 2 (lower is better) Translates to: KHGSLMLLTVLTCTNMDQVHAFL*ENCSEM Trigger: CATTTCTGAACAGTTTTCTCACAGGAAGGCGTGGAC...TTGGTCCATATTGGTACAGGTCAGGACAGTGAGTAGCATTAGAGAACCATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR TCA 90 bp | CATGGTTCTCTAATGCTACTCACTGTCCTGACCTGTACCAATATGGACCAAAATGTCCACGCCTTCCTGTaGGAAAACTGTTCAGAAATG | + |
Preference number: 2 (lower is better) Translates to: HGSLMLLTVLTCTNMDQNVHAFL*ENCSEM Trigger: CATTTCTGAACAGTTTTCTCACAGGAAGGCGTGGAC...ATTTTGGTCCATATTGGTACAGGTCAGGACAGTGAGTAGCATTAGAGAACCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR GCA 90 bp | AATAAAAGATGGCAGCCGCTGGAAAATGATGATGGCTACAACCTCTCAGGACAAAAAACTGTTCAGAAATaGAGGCTTCAGAGGTGGAGC | + |
Preference number: 2 (lower is better) Translates to: NKRWQPLENDDGYNLSGQKTVQK*RLQRWS Trigger: GCTCCACCTCTGAAGCCTGCATTTCTGAACAGTTTT...TTGTCCTGAGAGGTTGTAGCCATCATCATTTTCCAGCGGCTGCCATCTTTTATT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR GCA 90 bp | CTGACCTGTACCAATATGGACCAAAATAGCCAACCAAACCAAATTTGGGTATCAAGATTTACAGTCTGGTaGCAGCCATGCACCCACCAA | + |
Preference number: 2 (lower is better) Translates to: LTCTNMDQNSQPNQIWVSRFTVW*QPCTHQ Trigger: TTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCT...TGATACCCAAATTTGGTTTGGTTGGCTATTTTGGTCCATATTGGTACAGGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR CCA 90 bp | AAACATGGTTCTCTAATGCTACTCACTGTCCTGACCTGTACCAATATGGACCAATCATTACGTCCAGAGTaGCAACAGCTATCCCTTGAG | + |
Preference number: 2 (lower is better) Translates to: KHGSLMLLTVLTCTNMDQSLRPE*QQLSLE Trigger: CTCAAGGGATAGCTGTTGCCACTCTGGACGTAATGA...TTGGTCCATATTGGTACAGGTCAGGACAGTGAGTAGCATTAGAGAACCATGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR CCA 90 bp | TGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGTGTACTGCAAAGTGCGAGATGAAAACTTCCTaGGCTGGAAAGAGAAGAGGA | + |
Preference number: 2 (lower is better) Translates to: WLSASLFGVLKCVCTAKCEMKTS*AGKRRG Trigger: TCCTCTTCTCTTTCCAGCCCAGGAAGTTTTCATCTC...GCACTTTGCAGTACACACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
||
3UTR-3UTR TCA 90 bp | CTGACCTGTACCAATATGGACCAAAATAGCCAACCAAACCAAATTTGGGTATCAGTCCACGCCTTCCTGTaGGAAAACTGTTCAGAAATG | + |
Preference number: 2 (lower is better) Translates to: LTCTNMDQNSQPNQIWVSVHAFL*ENCSEM Trigger: CATTTCTGAACAGTTTTCTCACAGGAAGGCGTGGAC...TGATACCCAAATTTGGTTTGGTTGGCTATTTTGGTCCATATTGGTACAGGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
||
3UTR-3UTR TCA 90 bp | TACTACACAAACAAAGGAATCTCCAAGATGTTCTCCCTCACTTCACTTGGCAACACCCAGAAAACGTCCTaGGAGAGAAAACATGGTTCT | + |
Preference number: 2 (lower is better) Translates to: YYTNKGISKMFSLTSLGNTQKTS*ERKHGS Trigger: AGAACCATGTTTTCTCTCTCAGGACGTTTTCTGGGT...GTTGCCAAGTGAAGTGAGGGAGAACATCTTGGAGATTCCTTTGTTTGTGTAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
||
3UTR-3UTR GCA 90 bp | TACTACACAAACAAAGGAATCTCCAAGATGTTCTCCCTCACTTCACTTGGCAACAAAACTGTTCAGAAATaGAGGCTTCAGAGGTGGAGC | + |
Preference number: 2 (lower is better) Translates to: YYTNKGISKMFSLTSLGNKTVQK*RLQRWS Trigger: GCTCCACCTCTGAAGCCTGCATTTCTGAACAGTTTT...GTTGCCAAGTGAAGTGAGGGAGAACATCTTGGAGATTCCTTTGTTTGTGTAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
||
3UTR-3UTR GCA 90 bp | CAGGTCCTCCTTGTGTGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGTTGGTTGATCTATTGTaGCACAGGATCACACAAATT | + |
Preference number: 2 (lower is better) Translates to: QVLLVWLSASLFGVLKCVLVDLL*HRITQI Trigger: AATTTGTGTGATCCTGTGGCACAATAGATCAACCAA...CACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCACACAAGGAGGACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
||
3UTR-3UTR CCA 90 bp | TACTACACAAACAAAGGAATCTCCAAGATGTTCTCCCTCACTTCACTTGGCAACAATTCTATAAACACATaGGCTTGGGAGGCAGTGCTG | + |
Preference number: 2 (lower is better) Translates to: YYTNKGISKMFSLTSLGNNSINT*AWEAVL Trigger: CAGCACTGCCTCCCAAGCCCATGTGTTTATAGAATT...GTTGCCAAGTGAAGTGAGGGAGAACATCTTGGAGATTCCTTTGTTTGTGTAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
||
3UTR-3UTR CCA 90 bp | AGTAGTATATATAATACACACACAGCATCCACCATGTATGTACCAGACCACATCGAAAACTTCCTGGGCTaGAAAGAGAAGAGGAGGGCA | + |
Preference number: 2 (lower is better) Translates to: SSIYNTHTASTMYVPDHIENFLG*KEKRRA Trigger: TGCCCTCCTCTTCTCTTTCCAGCCCAGGAAGTTTTC...GATGTGGTCTGGTACATACATGGTGGATGCTGTGTGTGTATTATATATACTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
||
3UTR-3UTR CCA 90 bp | CTGACCTGTACCAATATGGACCAAAATAGCCAACCAAACCAAATTTGGGTATCAAATTCTATAAACACATaGGCTTGGGAGGCAGTGCTG | + |
Preference number: 2 (lower is better) Translates to: LTCTNMDQNSQPNQIWVSNSINT*AWEAVL Trigger: CAGCACTGCCTCCCAAGCCCATGTGTTTATAGAATT...TGATACCCAAATTTGGTTTGGTTGGCTATTTTGGTCCATATTGGTACAGGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR GCA 72 bp | GCAGAGGCCTCAGCAACCAGTCAGAAGGGGCTCAGCTaGTGCACAGGTCCTCCTTGTGTGGCTGAGTGCTTC | + |
Preference number: 3 (lower is better) Translates to: AEASATSQKGLS*CTGPPCVAECF Trigger: GAAGCACTCAGCCACACAAGGAGGACCTGTGCAGCAGCTGAGCCCCTTCTGACTGGTTGCTGAGGCCTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR GCA 72 bp | GAGGCCTCAGCAACCAGTCAGAAGGGGCTCAGCTGCTaGACAGGTCCTCCTTGTGTGGCTGAGTGCTTCATT | + |
Preference number: 3 (lower is better) Translates to: EASATSQKGLSC*TGPPCVAECFI Trigger: AATGAAGCACTCAGCCACACAAGGAGGACCTGTGCAGCAGCTGAGCCCCTTCTGACTGGTTGCTGAGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR TCA 72 bp | AACAGCTCACTCCTGCAAGCCCAAGGTTCAGGAGGCTaGGGCGGGAGAATTGGTAATTCAAGGCAACCTGGG | + |
Preference number: 3 (lower is better) Translates to: NSSLLQAQGSGG*GGRIGNSRQPG Trigger: CCCAGGTTGCCTTGAATTACCAATTCTCCCGCCTCAGCCTCCTGAACCTTGGGCTTGCAGGAGTGAGCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR TCA 72 bp | TTCTATAAACACATGGGCTTGGGAGGCAGTGCTGACTaGCACTGGATAGGCACGCATCTCCAGGGCGGAATG | + |
Preference number: 3 (lower is better) Translates to: FYKHMGLGGSAD*HWIGTHLQGGM Trigger: CATTCCGCCCTGGAGATGCGTGCCTATCCAGTGTCAGTCAGCACTGCCTCCCAAGCCCATGTGTTTATAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR GCA 72 bp | AGTTGCCCACAGCAAGCCTATAACTTGCAGTCCTCCTaGCTCAGCTTCAAGGTAGCTAGGATTACAGGCCTG | + |
Preference number: 3 (lower is better) Translates to: SCPQQAYNLQSS*LSFKVARITGL Trigger: CAGGCCTGTAATCCTAGCTACCTTGAAGCTGAGGCAGGAGGACTGCAAGTTATAGGCTTGCTGTGGGCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR CAA 90 bp | AATAAAAGATGGCAGCCGCTGGAAAATGATGATGGCTACAACCTCTCAGGACAAGGCAACAGCTATCCCTaGAGACCCGACGGTCTCCTT | + |
Preference number: 3 (lower is better) Translates to: NKRWQPLENDDGYNLSGQGNSYP*RPDGLL Trigger: AAGGAGACCGTCGGGTCTCAAGGGATAGCTGTTGCC...TTGTCCTGAGAGGTTGTAGCCATCATCATTTTCCAGCGGCTGCCATCTTTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR CAA 90 bp | CAGGTCCTCCTTGTGTGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGAAACGAGATTGTTCTTaGGTCCCCAGGGACCTGTCT | + |
Preference number: 3 (lower is better) Translates to: QVLLVWLSASLFGVLKCVKRDCS*VPRDLS Trigger: AGACAGGTCCCTGGGGACCAAAGAACAATCTCGTTT...CACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCACACAAGGAGGACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR CAA 90 bp | CAGGTCCTCCTTGTGTGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGGCATGCCAACTAGCTTaGCCACTGAACACTGTCTTC | + |
Preference number: 3 (lower is better) Translates to: QVLLVWLSASLFGVLKCVACQLA*PLNTVF Trigger: GAAGACAGTGTTCAGTGGCAAAGCTAGTTGGCATGC...CACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCACACAAGGAGGACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR TCA 72 bp | ACTGCAAAGTGCCAAAGAGGCCTCCAGAAGAGACCCTaGGCTGTGTTAGATAACAACACTACAGAAACGGCA | + |
Preference number: 3 (lower is better) Translates to: TAKCQRGLQKRP*AVLDNNTTETA Trigger: TGCCGTTTCTGTAGTGTTGTTATCTAACACAGCTCAGGGTCTCTTCTGGAGGCCTCTTTGGCACTTTGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR CCA 72 bp | GACTCTGTAACAAAGAATCCCAAAAGATTTACAGTCTaGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGC | + |
Preference number: 3 (lower is better) Translates to: DSVTKNPKRFTV*CQPCTHQVVRS Trigger: GCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTACAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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3UTR-3UTR CAA 90 bp | TGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGTGTACTGCAAAGTGCGCTGAGGCGGGAGAATaGGTAATTCAAGGCAACCTG | + |
Preference number: 3 (lower is better) Translates to: WLSASLFGVLKCVCTAKCAEAGE*VIQGNL Trigger: CAGGTTGCCTTGAATTACCAATTCTCCCGCCTCAGC...GCACTTTGCAGTACACACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR CAA 90 bp | TGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGTGTACTGCAAAGTGCAAACGAGATTGTTCTTaGGTCCCCAGGGACCTGTCT | + |
Preference number: 3 (lower is better) Translates to: WLSASLFGVLKCVCTAKCKRDCS*VPRDLS Trigger: AGACAGGTCCCTGGGGACCAAAGAACAATCTCGTTT...GCACTTTGCAGTACACACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR CAA 90 bp | TGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGTGTACTGCAAAGTGCGACAGATCTATGAGTTaGAGGCCAGCCTGGTCTACA | + |
Preference number: 3 (lower is better) Translates to: WLSASLFGVLKCVCTAKCDRSMS*RPAWST Trigger: TGTAGACCAGGCTGGCCTCAAACTCATAGATCTGTC...GCACTTTGCAGTACACACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR TCA 72 bp | GGCAACCTGGGTTACATACTGAGTTCCAGGCCAGCCTaGACAACAAACACAACACAGCCCTTGTCTAAAAAT | + |
Preference number: 3 (lower is better) Translates to: GNLGYILSSRPA*TTNTTQPLSKN Trigger: ATTTTTAGACAAGGGCTGTGTTGTGTTTGTTGTTCAGGCTGGCCTGGAACTCAGTATGTAACCCAGGTTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR CAA 90 bp | CTGACCTGTACCAATATGGACCAAAATAGCCAACCAAACCAAATTTGGGTATCAGCTGAGGCGGGAGAATaGGTAATTCAAGGCAACCTG | + |
Preference number: 3 (lower is better) Translates to: LTCTNMDQNSQPNQIWVSAEAGE*VIQGNL Trigger: CAGGTTGCCTTGAATTACCAATTCTCCCGCCTCAGC...TGATACCCAAATTTGGTTTGGTTGGCTATTTTGGTCCATATTGGTACAGGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR TCA 72 bp | AATGAATCCATTCAAAGCAATGAGGCATCCAAGGGTTaGAACGAGATTGTTCTTTGGTCCCCAGGGACCTGT | + |
Preference number: 3 (lower is better) Translates to: NESIQSNEASKG*NEIVLWSPGTC Trigger: ACAGGTCCCTGGGGACCAAAGAACAATCTCGTTTCAACCCTTGGATGCCTCATTGCTTTGAATGGATTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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3UTR GCA 72 bp | TCTGTAACAAAGAATCCCAAAAGATTTACAGTCTGGTaGCAGCCATGCACCCACCAAGTGGTTAGGAGCTAT | + |
Preference number: 3 (lower is better) Translates to: SVTKNPKRFTVW*QPCTHQVVRSY Trigger: ATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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3UTR CCA 72 bp | GATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTaGTTAGGAGCTATTCACATTAGATGTGCAAATCAT | + |
Preference number: 3 (lower is better) Translates to: DLQSGASHAPTK*LGAIHIRCANH Trigger: ATGATTTGCACATCTAATGTGAATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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3UTR CCA 72 bp | AACCACAACCCAGAAAACGTCCTGAGAGAGAAAACATaGTTCTCTAATGCTACTCACTGTCCTGACCTGTAC | + |
Preference number: 3 (lower is better) Translates to: NHNPENVLREKT*FSNATHCPDLY Trigger: GTACAGGTCAGGACAGTGAGTAGCATTAGAGAACCATGTTTTCTCTCTCAGGACGTTTTCTGGGTTGTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR-3UTR CAA 90 bp | TACTACACAAACAAAGGAATCTCCAAGATGTTCTCCCTCACTTCACTTGGCAACCCAACCAAACCAAATTaGGGTATCACTGGAAAGGGG | + |
Preference number: 3 (lower is better) Translates to: YYTNKGISKMFSLTSLGNPTKPN*GITGKG Trigger: CCCCTTTCCAGTGATACCCAAATTTGGTTTGGTTGG...GTTGCCAAGTGAAGTGAGGGAGAACATCTTGGAGATTCCTTTGTTTGTGTAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR TCA 72 bp | CATGACCTGTGTTCAACCACAACCCAGAAAACGTCCTaGGAGAGAAAACATGGTTCTCTAATGCTACTCACT | + |
Preference number: 3 (lower is better) Translates to: HDLCSTTTQKTS*ERKHGSLMLLT Trigger: AGTGAGTAGCATTAGAGAACCATGTTTTCTCTCTCAGGACGTTTTCTGGGTTGTGGTTGAACACAGGTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR CCA 72 bp | ACCAATATGGACCAAAATAGCCAACCAAACCAAATTTaGGTATCACTGGAAAGGGGTTCTGAGATCCTGAGC | + |
Preference number: 3 (lower is better) Translates to: TNMDQNSQPNQI*VSLERGSEILS Trigger: GCTCAGGATCTCAGAACCCCTTTCCAGTGATACCCAAATTTGGTTTGGTTGGCTATTTTGGTCCATATTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR GCA 72 bp | AAAGCAGGACTATACAAGCATAGTGCTAGCACATTGTaGTTAACATTCAAGAAGTCCTGGGTTCGATTCCCA | + |
Preference number: 3 (lower is better) Translates to: KAGLYKHSASTL*LTFKKSWVRFP Trigger: TGGGAATCGAACCCAGGACTTCTTGAATGTTAAGCACAATGTGCTAGCACTATGCTTGTATAGTCCTGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR CCA 72 bp | AATGAGCATTGCTTGCTTACTCTTGGGGAGACAGCTTaGTTTCTCACAACTGTGATAGCATTTAGTGGACTA | + |
Preference number: 3 (lower is better) Translates to: NEHCLLTLGETA*FLTTVIAFSGL Trigger: TAGTCCACTAAATGCTATCACAGTTGTGAGAAACCAAGCTGTCTCCCCAAGAGTAAGCAAGCAATGCTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR TCA 72 bp | AAATTTGGGTATCACTGGAAAGGGGTTCTGAGATCCTaGGCTAGACAACGAATTCAGAAAATAGCCAAATTC | + |
Preference number: 3 (lower is better) Translates to: KFGYHWKGVLRS*ARQRIQKIAKF Trigger: GAATTTGGCTATTTTCTGAATTCGTTGTCTAGCTCAGGATCTCAGAACCCCTTTCCAGTGATACCCAAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR TCA 72 bp | ATACTGAGGACAGCTCTAAGCTTTAAATGGGTTGGTTaGTCTATTGTGCCACAGGATCACACAAATTCTAAT | + |
Preference number: 3 (lower is better) Translates to: ILRTALSFKWVG*SIVPQDHTNSN Trigger: ATTAGAATTTGTGTGATCCTGTGGCACAATAGATCAACCAACCCATTTAAAGCTTAGAGCTGTCCTCAGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR CCA 72 bp | CAAAGGAATCTCCAAGATGTTCTCCCTCACTTCACTTaGCAACAGACCTTTCTAAATAAAGTACTTAAATGC | + |
Preference number: 3 (lower is better) Translates to: QRNLQDVLPHFT*QQTFLNKVLKC Trigger: GCATTTAAGTACTTTATTTAGAAAGGTCTGTTGCCAAGTGAAGTGAGGGAGAACATCTTGGAGATTCCTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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3UTR TCA 72 bp | TGGTTTCTCACAACTGTGATAGCATTTAGTGGACTATaGCTGGTCGAATACCTTTTTCTTTATATTATTGAC | + |
Preference number: 3 (lower is better) Translates to: WFLTTVIAFSGL*LVEYLFLYIID Trigger: GTCAATAATATAAAGAAAAAGGTATTCGACCAGTCATAGTCCACTAAATGCTATCACAGTTGTGAGAAACCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR TCA 90 bp | CGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTACTGGGGTAGAAACGTaGTTTGGGTGGAGGCACCCC | + |
Preference number: 4 (lower is better) Translates to: RARLFQRGQKMSLSPRLPTGVET*FGWRHP Trigger: GGGGTGCCTCCACCCAAATCACGTTTCTACCCCAGT...AGGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | CGGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGACTGGGGTAGAAACGTaGTTTGGGTGGAGGCACCCC | + |
Preference number: 4 (lower is better) Translates to: RVSGQAFPERSENVSESTTGVET*FGWRHP Trigger: GGGGTGCCTCCACCCAAATCACGTTTCTACCCCAGT...CGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | CAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATTCACATTAGAAGAGACTGGAGCAGGTaGAAGGTGGCCCCCAAGGCC | + |
Preference number: 4 (lower is better) Translates to: QSGASHAPTKWLGAIHIRRDWSR*KVAPKA Trigger: GGCCTTGGGGGCCACCTTTCACCTGCTCCAGTCTCT...TCTAATGTGAATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | CCAGTTAACGGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGGGAGCAGGTGAAAGGTaGCCCCCAAGGCCCAACCAG | + |
Preference number: 4 (lower is better) Translates to: PVNGFRARLFQRGQKMSLGAGER*PPRPNQ Trigger: CTGGTTGGGCCTTGGGGGCCACCTTTCACCTGCTCC...CAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCCGTTAACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR GCA 90 bp | TCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCCAGGGCTCCCAGAGTTaGCAGTCTTGCAGCTTTCAG | + |
Preference number: 4 (lower is better) Translates to: SGQAFPERSENVSESTPSQGSQS*QSCSFQ Trigger: CTGAAAGCTGCAAGACTGGCAACTCTGGGAGCCCTG...GGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
||
CDS-3UTR GCA 90 bp | CGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTCAGGGCTCCCAGAGTTaGCAGTCTTGCAGCTTTCAG | + |
Preference number: 4 (lower is better) Translates to: RARLFQRGQKMSLSPRLPQGSQS*QSCSFQ Trigger: CTGAAAGCTGCAAGACTGGCAACTCTGGGAGCCCTG...AGGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | TCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGGGGATCGAGTCTTTaGCCACCTCCAAGAGCTCCT | + |
Preference number: 4 (lower is better) Translates to: SGQAFPERSENVSESTPSWGSSL*PPPRAP Trigger: AGGAGCTCTTGGAGGTGGCCAAAGACTCGATCCCCA...GGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | CGGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGTGGGGATCGAGTCTTTaGCCACCTCCAAGAGCTCCT | + |
Preference number: 4 (lower is better) Translates to: RVSGQAFPERSENVSESTWGSSL*PPPRAP Trigger: AGGAGCTCTTGGAGGTGGCCAAAGACTCGATCCCCA...CGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | GCCCAAATCACTAGGCTCAAGAGCAAGACTCATCTAAAAACCCCTCCCTCCTTAAGAGACTGGAGCAGGTaGAAGGTGGCCCCCAAGGCC | + |
Preference number: 4 (lower is better) Translates to: AQITRLKSKTHLKTPPSLRDWSR*KVAPKA Trigger: GGCCTTGGGGGCCACCTTTCACCTGCTCCAGTCTCT...TAAGGAGGGAGGGGTTTTTAGATGAGTCTTGCTCTTGAGCCTAGTGATTTGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | AAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATTAGAGACTGGAGCAGGTaGAAGGTGGCCCCCAAGGCC | + |
Preference number: 4 (lower is better) Translates to: KDLQSGASHAPTKWLGAIRDWSR*KVAPKA Trigger: GGCCTTGGGGGCCACCTTTCACCTGCTCCAGTCTCT...AATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | CGGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGTTTCCCAGTGGCTTCTaGGGATCGAGTCTTTGGCCA | + |
Preference number: 4 (lower is better) Translates to: RVSGQAFPERSENVSESTFPSGF*GSSLWP Trigger: TGGCCAAAGACTCGATCCCCAGAAGCCACTGGGAAA...CGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | CGGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGTCCTCGGACTTCTTCTaGCTGGTGAAGTTTCCCCTG | + |
Preference number: 4 (lower is better) Translates to: RVSGQAFPERSENVSESTSSDFF*LVKFPL Trigger: CAGGGGAAACTTCACCAGCCAGAAGAAGTCCGAGGA...CGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | AAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATGGAGCAGGTGAAAGGTaGCCCCCAAGGCCCAACCAG | + |
Preference number: 4 (lower is better) Translates to: KRFTVWCQPCTHQVVRSYGAGER*PPRPNQ Trigger: CTGGTTGGGCCTTGGGGGCCACCTTTCACCTGCTCC...ATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | CAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCGGAGCAGGTGAAAGGTaGCCCCCAAGGCCCAACCAG | + |
Preference number: 4 (lower is better) Translates to: QRGQKMSLSPRLPVRKLFGAGER*PPRPNQ Trigger: CTGGTTGGGCCTTGGGGGCCACCTTTCACCTGCTCC...GAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | GGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCGCACCCTGTTTGGGCTaGTCCACAAAAGCAGAAAGT | + |
Preference number: 4 (lower is better) Translates to: GFRARLFQRGQKMSLSPRAPCLG*STKAES Trigger: ACTTTCTGCTTTTGTGGATCAGCCCAAACAGGGTGC...GCGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | TGTAACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGAGACTGGAGCAGGTaGAAGGTGGCCCCCAAGGCC | + |
Preference number: 4 (lower is better) Translates to: CNKESQKIYSLVPAMHPPRDWSR*KVAPKA Trigger: GGCCTTGGGGGCCACCTTTCACCTGCTCCAGTCTCT...TGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR GCA 90 bp | GTCCCCAGGGACCTGTCTCTGAACTCGCAATCTAGCATGGAGTTCCAAACCTTTTTGCTGAAGCAGTGCTaGTCACACTCCTGTGGAGGC | + |
Preference number: 4 (lower is better) Translates to: VPRDLSLNSQSSMEFQTFLLKQC*SHSCGG Trigger: GCCTCCACAGGAGTGTGAGCAGCACTGCTTCAGCAA...AAAGGTTTGGAACTCCATGCTAGATTGCGAGTTCAGAGACAGGTCCCTGGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072061.12 |
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CDS-3UTR GCA 90 bp | GGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCTTGTTGCTGAAGCAGTaGTGCTCACACTCCTGTGGA | + |
Preference number: 4 (lower is better) Translates to: GFRARLFQRGQKMSLSPRLLLKQ*CSHSCG Trigger: TCCACAGGAGTGTGAGCAGCACTGCTTCAGCAACAA...GCGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072061.12 |
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CDS-3UTR CCA 90 bp | GTCCCCAGGGACCTGTCTCTGAACTCGCAATCTAGCATGGAGTTCCAAACCTTTTGGGGATCGAGTCTTTaGCCACCTCCAAGAGCTCCT | + |
Preference number: 4 (lower is better) Translates to: VPRDLSLNSQSSMEFQTFWGSSL*PPPRAP Trigger: AGGAGCTCTTGGAGGTGGCCAAAGACTCGATCCCCA...AAAGGTTTGGAACTCCATGCTAGATTGCGAGTTCAGAGACAGGTCCCTGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | CAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATTCACATTAGATGGGGATCGAGTCTTTaGCCACCTCCAAGAGCTCCT | + |
Preference number: 4 (lower is better) Translates to: QSGASHAPTKWLGAIHIRWGSSL*PPPRAP Trigger: AGGAGCTCTTGGAGGTGGCCAAAGACTCGATCCCCA...TCTAATGTGAATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | AACCAGTTAACGGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCGGGGTCCTTTCCCAGTaGCTTCTGGGGATCGAGTCT | + |
Preference number: 4 (lower is better) Translates to: NQLTGFGPGFSREVRKCLGVLSQ*LLGIES Trigger: AGACTCGATCCCCAGAAGCCACTGGGAAAGGACCCC...GAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCCGTTAACTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | AACAATACACACTTTATAGCTAGGGCCCCTGTGTCTGAGGTGTCAGAGACCAGCTCCAAGAGCAGAGCCTaGGCTTTCTGCTCAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: NNTHFIARAPVSEVSETSSKSRA*AFCSGS Trigger: GCTGCCTGAGCAGAAAGCCCAGGCTCTGCTCTTGGA...GCTGGTCTCTGACACCTCAGACACAGGGGCCCTAGCTATAAAGTGTGTATTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CCA 90 bp | CAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTCCAAGAGCAGAGCCTaGGCTTTCTGCTCAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: QRIPKDLQSGASHAPTKWSKSRA*AFCSGS Trigger: GCTGCCTGAGCAGAAAGCCCAGGCTCTGCTCTTGGA...CCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | GAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAATGCAGGGGAGCAGGTGAAAGGTaGCCCCCAAGGCCCAACCAG | + |
Preference number: 4 (lower is better) Translates to: ENVSESTPSCEKTVQKCRGAGER*PPRPNQ Trigger: CTGGTTGGGCCTTGGGGGCCACCTTTCACCTGCTCC...CCTGCATTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | AGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAAAGAGACTGGAGCAGGTaGAAGGTGGCCCCCAAGGCC | + |
Preference number: 4 (lower is better) Translates to: RSENVSESTPSCEKTVQKRDWSR*KVAPKA Trigger: GGCCTTGGGGGCCACCTTTCACCTGCTCCAGTCTCT...TTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTCTGACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | TGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGTGTACTGCAAAGTGCAGAGACTGGAGCAGGTaGAAGGTGGCCCCCAAGGCC | + |
Preference number: 4 (lower is better) Translates to: WLSASLFGVLKCVCTAKCRDWSR*KVAPKA Trigger: GGCCTTGGGGGCCACCTTTCACCTGCTCCAGTCTCT...GCACTTTGCAGTACACACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR GCA 90 bp | TCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCCAGAGTTGCCAGTCTTaGAGCTTTCAGTCCAAATCC | + |
Preference number: 4 (lower is better) Translates to: SGQAFPERSENVSESTPSQSCQS*SFQSKS Trigger: GGATTTGGACTGAAAGCTGCAAGACTGGCAACTCTG...GGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | CAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTGGGGATCGAGTCTTTaGCCACCTCCAAGAGCTCCT | + |
Preference number: 4 (lower is better) Translates to: QRIPKDLQSGASHAPTKWWGSSL*PPPRAP Trigger: AGGAGCTCTTGGAGGTGGCCAAAGACTCGATCCCCA...CCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | CAGGTCCTCCTTGTGTGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGGGGGTCCTTTCCCAGTaGCTTCTGGGGATCGAGTCT | + |
Preference number: 4 (lower is better) Translates to: QVLLVWLSASLFGVLKCVGVLSQ*LLGIES Trigger: AGACTCGATCCCCAGAAGCCACTGGGAAAGGACCCC...CACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCACACAAGGAGGACCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CCA 90 bp | AAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATTTCCAAGAGCAGAGCCTaGGCTTTCTGCTCAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: KDLQSGASHAPTKWLGAISKSRA*AFCSGS Trigger: GCTGCCTGAGCAGAAAGCCCAGGCTCTGCTCTTGGA...AATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | CAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCTCCAAGAGCAGAGCCTaGGCTTTCTGCTCAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: QRGQKMSLSPRLPVRKLFSKSRA*AFCSGS Trigger: GCTGCCTGAGCAGAAAGCCCAGGCTCTGCTCTTGGA...GAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | ACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGTCCAAGAGCAGAGCCTaGGCTTTCTGCTCAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: TKNPKRFTVWCQPCTHQVSKSRA*AFCSGS Trigger: GCTGCCTGAGCAGAAAGCCCAGGCTCTGCTCTTGGA...CACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | AGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAAGGAGCAGGTGAAAGGTaGCCCCCAAGGCCCAACCAG | + |
Preference number: 4 (lower is better) Translates to: RSENVSESTPSCEKTVQKGAGER*PPRPNQ Trigger: CTGGTTGGGCCTTGGGGGCCACCTTTCACCTGCTCC...TTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTCTGACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | CGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGGAAAGGTGAATTCTTaGAGATCTCCTCTACCTCCA | + |
Preference number: 4 (lower is better) Translates to: RARLFQRGQKMSLSPRLPGKVNS*RSPLPP Trigger: TGGAGGTAGAGGAGATCTTCAAGAATTCACCTTTCC...AGGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | AAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAATGCAGGCACTGGGGTAGAAACGTaGTTTGGGTGGAGGCACCCC | + |
Preference number: 4 (lower is better) Translates to: KMSLSPRLPVRKLFRNAGTGVET*FGWRHP Trigger: GGGGTGCCTCCACCCAAATCACGTTTCTACCCCAGT...GCCTGCATTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR GCA 90 bp | AAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATTCAGGGCTCCCAGAGTTaGCAGTCTTGCAGCTTTCAG | + |
Preference number: 4 (lower is better) Translates to: KDLQSGASHAPTKWLGAIQGSQS*QSCSFQ Trigger: CTGAAAGCTGCAAGACTGGCAACTCTGGGAGCCCTG...AATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | CAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTTCCCAGTGGCTTCTaGGGATCGAGTCTTTGGCCA | + |
Preference number: 4 (lower is better) Translates to: QRIPKDLQSGASHAPTKWFPSGF*GSSLWP Trigger: TGGCCAAAGACTCGATCCCCAGAAGCCACTGGGAAA...CCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | GTAACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGGGGTCCTTTCCCAGTaGCTTCTGGGGATCGAGTCT | + |
Preference number: 4 (lower is better) Translates to: VTKNPKRFTVWCQPCTHQGVLSQ*LLGIES Trigger: AGACTCGATCCCCAGAAGCCACTGGGAAAGGACCCC...TTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | GAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAATGCAGGGGGGTCCTTTCCCAGTaGCTTCTGGGGATCGAGTCT | + |
Preference number: 4 (lower is better) Translates to: ENVSESTPSCEKTVQKCRGVLSQ*LLGIES Trigger: AGACTCGATCCCCAGAAGCCACTGGGAAAGGACCCC...CCTGCATTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | GCAGGACTCTGTAACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGGGGGTCCTTTCCCAGTaGCTTCTGGGGATCGAGTCT | + |
Preference number: 4 (lower is better) Translates to: AGLCNKESQKIYSLVPAMGVLSQ*LLGIES Trigger: AGACTCGATCCCCAGAAGCCACTGGGAAAGGACCCC...CATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTACAGAGTCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | TCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGGTTACCACCATACTaGTATTTCACACCCCCAAAG | + |
Preference number: 4 (lower is better) Translates to: SGQAFPERSENVSESTPSWLPPY*YFTPPK Trigger: CTTTGGGGGTGTGAAATACCAGTATGGTGGTAACCA...GGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | AAACGAGATTGTTCTTTGGTCCCCAGGGACCTGTCTCTGAACTCGCAATCTAGCTCCTCGGACTTCTTCTaGCTGGTGAAGTTTCCCCTG | + |
Preference number: 4 (lower is better) Translates to: KRDCSLVPRDLSLNSQSSSSDFF*LVKFPL Trigger: CAGGGGAAACTTCACCAGCCAGAAGAAGTCCGAGGA...GCTAGATTGCGAGTTCAGAGACAGGTCCCTGGGGACCAAAGAACAATCTCGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | AACCAGTTAACGGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTCCTCGGACTTCTTCTaGCTGGTGAAGTTTCCCCTG | + |
Preference number: 4 (lower is better) Translates to: NQLTGFGPGFSREVRKCLSSDFF*LVKFPL Trigger: CAGGGGAAACTTCACCAGCCAGAAGAAGTCCGAGGA...GAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCCGTTAACTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | AATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGTCCTCGGACTTCTTCTaGCTGGTGAAGTTTCCCCTG | + |
Preference number: 4 (lower is better) Translates to: NPKRFTVWCQPCTHQVVRSSDFF*LVKFPL Trigger: CAGGGGAAACTTCACCAGCCAGAAGAAGTCCGAGGA...CCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | AAACATGGTTCTCTAATGCTACTCACTGTCCTGACCTGTACCAATATGGACCAAGGAGCAGGTGAAAGGTaGCCCCCAAGGCCCAACCAG | + |
Preference number: 4 (lower is better) Translates to: KHGSLMLLTVLTCTNMDQGAGER*PPRPNQ Trigger: CTGGTTGGGCCTTGGGGGCCACCTTTCACCTGCTCC...TTGGTCCATATTGGTACAGGTCAGGACAGTGAGTAGCATTAGAGAACCATGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR TCA 90 bp | CAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGGCACCCTGTTTGGGCTaGTCCACAAAAGCAGAAAGT | + |
Preference number: 4 (lower is better) Translates to: QRIPKDLQSGASHAPTKWAPCLG*STKAES Trigger: ACTTTCTGCTTTTGTGGATCAGCCCAAACAGGGTGC...CCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | CTGTGGAACAATACACACTTTATAGCTAGGGCCCCTGTGTCTGAGGTGTCAGAGGCACCCTGTTTGGGCTaGTCCACAAAAGCAGAAAGT | + |
Preference number: 4 (lower is better) Translates to: LWNNTHFIARAPVSEVSEAPCLG*STKAES Trigger: ACTTTCTGCTTTTGTGGATCAGCCCAAACAGGGTGC...CTCTGACACCTCAGACACAGGGGCCCTAGCTATAAAGTGTGTATTGTTCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR TCA 90 bp | AATAAAAGATGGCAGCCGCTGGAAAATGATGATGGCTACAACCTCTCAGGACAAACTGGGGTAGAAACGTaGTTTGGGTGGAGGCACCCC | + |
Preference number: 4 (lower is better) Translates to: NKRWQPLENDDGYNLSGQTGVET*FGWRHP Trigger: GGGGTGCCTCCACCCAAATCACGTTTCTACCCCAGT...TTGTCCTGAGAGGTTGTAGCCATCATCATTTTCCAGCGGCTGCCATCTTTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR TCA 90 bp | AACAATACACACTTTATAGCTAGGGCCCCTGTGTCTGAGGTGTCAGAGACCAGCACTTCTTCTGGCTGGTaGAGTTTCCCCTGTACTACC | + |
Preference number: 4 (lower is better) Translates to: NNTHFIARAPVSEVSETSTSSGW*SFPCTT Trigger: GGTAGTACAGGGGAAACTTCACCAGCCAGAAGAAGT...GCTGGTCTCTGACACCTCAGACACAGGGGCCCTAGCTATAAAGTGTGTATTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR TCA 90 bp | CCAGTTAACGGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGTGTTCACTTTCTTTGTaGGCTGTAAGAGGGTGCCGT | + |
Preference number: 4 (lower is better) Translates to: PVNGFRARLFQRGQKMSLCSLSL*AVRGCR Trigger: ACGGCACCCTCTTACAGCTCACAAAGAAAGTGAACA...CAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCCGTTAACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | CAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATTCACATTAGATGTTCACTTTCTTTGTaGGCTGTAAGAGGGTGCCGT | + |
Preference number: 4 (lower is better) Translates to: QSGASHAPTKWLGAIHIRCSLSL*AVRGCR Trigger: ACGGCACCCTCTTACAGCTCACAAAGAAAGTGAACA...TCTAATGTGAATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | CAGGTCCTCCTTGTGTGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGCTGAGGCTTTGTTGCTaGAGCAGTGCTGCTCACACT | + |
Preference number: 4 (lower is better) Translates to: QVLLVWLSASLFGVLKCVLRLCC*SSAAHT Trigger: AGTGTGAGCAGCACTGCTTCAGCAACAAAGCCTCAG...CACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCACACAAGGAGGACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072061.12 |
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CDS-3UTR CCA 90 bp | AAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATTTTCCCAGTGGCTTCTaGGGATCGAGTCTTTGGCCA | + |
Preference number: 4 (lower is better) Translates to: KRFTVWCQPCTHQVVRSYFPSGF*GSSLWP Trigger: TGGCCAAAGACTCGATCCCCAGAAGCCACTGGGAAA...ATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | CAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCTTTCCCAGTGGCTTCTaGGGATCGAGTCTTTGGCCA | + |
Preference number: 4 (lower is better) Translates to: QRGQKMSLSPRLPVRKLFFPSGF*GSSLWP Trigger: TGGCCAAAGACTCGATCCCCAGAAGCCACTGGGAAA...GAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | GTCCCCAGGGACCTGTCTCTGAACTCGCAATCTAGCATGGAGTTCCAAACCTTTCCCATCTCCCCTTCTTaGTTACCACCATACTGGTAT | + |
Preference number: 4 (lower is better) Translates to: VPRDLSLNSQSSMEFQTFPISPS*LPPYWY Trigger: ATACCAGTATGGTGGTAACCAAGAAGGGGAGATGGG...AAAGGTTTGGAACTCCATGCTAGATTGCGAGTTCAGAGACAGGTCCCTGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | AAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATTCCTCGGACTTCTTCTaGCTGGTGAAGTTTCCCCTG | + |
Preference number: 4 (lower is better) Translates to: KRFTVWCQPCTHQVVRSYSSDFF*LVKFPL Trigger: CAGGGGAAACTTCACCAGCCAGAAGAAGTCCGAGGA...ATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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3UTR CAA 72 bp | AATGTTCATTACGTCCAGAGTGGCAACAGCTATCCCTaGAGACCCGACGGTCTCCTTGCTTATACTCTAGGC | + |
Preference number: 4 (lower is better) Translates to: NVHYVQSGNSYP*RPDGLLAYTLG Trigger: GCCTAGAGTATAAGCAAGGAGACCGTCGGGTCTCAAGGGATAGCTGTTGCCACTCTGGACGTAATGAACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR TCA 90 bp | AAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATGCACCCTGTTTGGGCTaGTCCACAAAAGCAGAAAGT | + |
Preference number: 4 (lower is better) Translates to: KRFTVWCQPCTHQVVRSYAPCLG*STKAES Trigger: ACTTTCTGCTTTTGTGGATCAGCCCAAACAGGGTGC...ATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | GTCCCCAGGGACCTGTCTCTGAACTCGCAATCTAGCATGGAGTTCCAAACCTTTGGAAAGGTGAATTCTTaGAGATCTCCTCTACCTCCA | + |
Preference number: 4 (lower is better) Translates to: VPRDLSLNSQSSMEFQTFGKVNS*RSPLPP Trigger: TGGAGGTAGAGGAGATCTTCAAGAATTCACCTTTCC...AAAGGTTTGGAACTCCATGCTAGATTGCGAGTTCAGAGACAGGTCCCTGGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | TACTACACAAACAAAGGAATCTCCAAGATGTTCTCCCTCACTTCACTTGGCAACACTGGGGTAGAAACGTaGTTTGGGTGGAGGCACCCC | + |
Preference number: 4 (lower is better) Translates to: YYTNKGISKMFSLTSLGNTGVET*FGWRHP Trigger: GGGGTGCCTCCACCCAAATCACGTTTCTACCCCAGT...GTTGCCAAGTGAAGTGAGGGAGAACATCTTGGAGATTCCTTTGTTTGTGTAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR TCA 90 bp | AAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATTACTTCTTCTGGCTGGTaGAGTTTCCCCTGTACTACC | + |
Preference number: 4 (lower is better) Translates to: KDLQSGASHAPTKWLGAITSSGW*SFPCTT Trigger: GGTAGTACAGGGGAAACTTCACCAGCCAGAAGAAGT...AATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | AAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATACTTCTTCTGGCTGGTaGAGTTTCCCCTGTACTACC | + |
Preference number: 4 (lower is better) Translates to: KRFTVWCQPCTHQVVRSYTSSGW*SFPCTT Trigger: GGTAGTACAGGGGAAACTTCACCAGCCAGAAGAAGT...ATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | CAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCACTTCTTCTGGCTGGTaGAGTTTCCCCTGTACTACC | + |
Preference number: 4 (lower is better) Translates to: QRGQKMSLSPRLPVRKLFTSSGW*SFPCTT Trigger: GGTAGTACAGGGGAAACTTCACCAGCCAGAAGAAGT...GAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR GCA 90 bp | TCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATTCACATTAGATGTCAGAGTTGCCAGTCTTaGAGCTTTCAGTCCAAATCC | + |
Preference number: 4 (lower is better) Translates to: SGASHAPTKWLGAIHIRCQSCQS*SFQSKS Trigger: GGATTTGGACTGAAAGCTGCAAGACTGGCAACTCTG...ACATCTAATGTGAATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR GCA 90 bp | AACCAGTTAACGGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCCAGAGTTGCCAGTCTTaGAGCTTTCAGTCCAAATCC | + |
Preference number: 4 (lower is better) Translates to: NQLTGFGPGFSREVRKCLQSCQS*SFQSKS Trigger: GGATTTGGACTGAAAGCTGCAAGACTGGCAACTCTG...GAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCCGTTAACTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR GCA 90 bp | AGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAACAGGGCTCCCAGAGTTaGCAGTCTTGCAGCTTTCAG | + |
Preference number: 4 (lower is better) Translates to: RSENVSESTPSCEKTVQKQGSQS*QSCSFQ Trigger: CTGAAAGCTGCAAGACTGGCAACTCTGGGAGCCCTG...TTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTCTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | AAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAATGCAGGCTTTCCCAGTGGCTTCTaGGGATCGAGTCTTTGGCCA | + |
Preference number: 4 (lower is better) Translates to: KMSLSPRLPVRKLFRNAGFPSGF*GSSLWP Trigger: TGGCCAAAGACTCGATCCCCAGAAGCCACTGGGAAA...GCCTGCATTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | CCAGTAATAAAACAATACACGATCTCATCGCACGCACAGCTGCAGAGGCCTCAGCCCATCTCCCCTTCTTaGTTACCACCATACTGGTAT | + |
Preference number: 4 (lower is better) Translates to: PVIKQYTISSHAQLQRPQPISPS*LPPYWY Trigger: ATACCAGTATGGTGGTAACCAAGAAGGGGAGATGGG...CTGAGGCCTCTGCAGCTGTGCGTGCGATGAGATCGTGTATTGTTTTATTACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CCA 90 bp | AACAATACACACTTTATAGCTAGGGCCCCTGTGTCTGAGGTGTCAGAGACCAGCCCCATCTCCCCTTCTTaGTTACCACCATACTGGTAT | + |
Preference number: 4 (lower is better) Translates to: NNTHFIARAPVSEVSETSPISPS*LPPYWY Trigger: ATACCAGTATGGTGGTAACCAAGAAGGGGAGATGGG...GCTGGTCTCTGACACCTCAGACACAGGGGCCCTAGCTATAAAGTGTGTATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR TCA 90 bp | AACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGCACCCTGTTTGGGCTaGTCCACAAAAGCAGAAAGT | + |
Preference number: 4 (lower is better) Translates to: NKESQKIYSLVPAMHPPSAPCLG*STKAES Trigger: ACTTTCTGCTTTTGTGGATCAGCCCAAACAGGGTGC...ACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | CTGTGGAACAATACACACTTTATAGCTAGGGCCCCTGTGTCTGAGGTGTCAGAGGGAAAGGTGAATTCTTaGAGATCTCCTCTACCTCCA | + |
Preference number: 4 (lower is better) Translates to: LWNNTHFIARAPVSEVSEGKVNS*RSPLPP Trigger: TGGAGGTAGAGGAGATCTTCAAGAATTCACCTTTCC...CTCTGACACCTCAGACACAGGGGCCCTAGCTATAAAGTGTGTATTGTTCCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR TCA 90 bp | GAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAATGCAGGACTTCTTCTGGCTGGTaGAGTTTCCCCTGTACTACC | + |
Preference number: 4 (lower is better) Translates to: ENVSESTPSCEKTVQKCRTSSGW*SFPCTT Trigger: GGTAGTACAGGGGAAACTTCACCAGCCAGAAGAAGT...CCTGCATTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | CAGGTCCTCCTTGTGTGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGTGTTCACTTTCTTTGTaGGCTGTAAGAGGGTGCCGT | + |
Preference number: 4 (lower is better) Translates to: QVLLVWLSASLFGVLKCVCSLSL*AVRGCR Trigger: ACGGCACCCTCTTACAGCTCACAAAGAAAGTGAACA...CACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCACACAAGGAGGACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR GCA 90 bp | CAGGTCCTCCTTGTGTGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGCAGAGTTGCCAGTCTTaGAGCTTTCAGTCCAAATCC | + |
Preference number: 4 (lower is better) Translates to: QVLLVWLSASLFGVLKCVQSCQS*SFQSKS Trigger: GGATTTGGACTGAAAGCTGCAAGACTGGCAACTCTG...CACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCACACAAGGAGGACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CCA 90 bp | AATAAAAGATGGCAGCCGCTGGAAAATGATGATGGCTACAACCTCTCAGGACAATTTCCCAGTGGCTTCTaGGGATCGAGTCTTTGGCCA | + |
Preference number: 4 (lower is better) Translates to: NKRWQPLENDDGYNLSGQFPSGF*GSSLWP Trigger: TGGCCAAAGACTCGATCCCCAGAAGCCACTGGGAAA...TTGTCCTGAGAGGTTGTAGCCATCATCATTTTCCAGCGGCTGCCATCTTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CCA 90 bp | CTATTCACATTAGATGTGCAAATCATTGAAGCCCAAATCACTAGGCTCAAGAGCGGGGTCCTTTCCCAGTaGCTTCTGGGGATCGAGTCT | + |
Preference number: 4 (lower is better) Translates to: LFTLDVQIIEAQITRLKSGVLSQ*LLGIES Trigger: AGACTCGATCCCCAGAAGCCACTGGGAAAGGACCCC...GCTCTTGAGCCTAGTGATTTGGGCTTCAATGATTTGCACATCTAATGTGAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | CTATTCACATTAGATGTGCAAATCATTGAAGCCCAAATCACTAGGCTCAAGAGCTCCAAGAGCAGAGCCTaGGCTTTCTGCTCAGGCAGC | + |
Preference number: 4 (lower is better) Translates to: LFTLDVQIIEAQITRLKSSKSRA*AFCSGS Trigger: GCTGCCTGAGCAGAAAGCCCAGGCTCTGCTCTTGGA...GCTCTTGAGCCTAGTGATTTGGGCTTCAATGATTTGCACATCTAATGTGAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | AATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGTGGTTACCACCATACTaGTATTTCACACCCCCAAAG | + |
Preference number: 4 (lower is better) Translates to: NPKRFTVWCQPCTHQVVRWLPPY*YFTPPK Trigger: CTTTGGGGGTGTGAAATACCAGTATGGTGGTAACCA...CCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | AACCAGTTAACGGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGGTTACCACCATACTaGTATTTCACACCCCCAAAG | + |
Preference number: 4 (lower is better) Translates to: NQLTGFGPGFSREVRKCLWLPPY*YFTPPK Trigger: CTTTGGGGGTGTGAAATACCAGTATGGTGGTAACCA...GAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCCGTTAACTGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | GCCCAAATCACTAGGCTCAAGAGCAAGACTCATCTAAAAACCCCTCCCTCCTTACCCATCTCCCCTTCTTaGTTACCACCATACTGGTAT | + |
Preference number: 4 (lower is better) Translates to: AQITRLKSKTHLKTPPSLPISPS*LPPYWY Trigger: ATACCAGTATGGTGGTAACCAAGAAGGGGAGATGGG...TAAGGAGGGAGGGGTTTTTAGATGAGTCTTGCTCTTGAGCCTAGTGATTTGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | ACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGGAAAGGTGAATTCTTaGAGATCTCCTCTACCTCCA | + |
Preference number: 4 (lower is better) Translates to: TKNPKRFTVWCQPCTHQVGKVNS*RSPLPP Trigger: TGGAGGTAGAGGAGATCTTCAAGAATTCACCTTTCC...CACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | AGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAAACTTCTTCTGGCTGGTaGAGTTTCCCCTGTACTACC | + |
Preference number: 4 (lower is better) Translates to: RSENVSESTPSCEKTVQKTSSGW*SFPCTT Trigger: GGTAGTACAGGGGAAACTTCACCAGCCAGAAGAAGT...TTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTCTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | TGTAACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCATGTTCACTTTCTTTGTaGGCTGTAAGAGGGTGCCGT | + |
Preference number: 4 (lower is better) Translates to: CNKESQKIYSLVPAMHPPCSLSL*AVRGCR Trigger: ACGGCACCCTCTTACAGCTCACAAAGAAAGTGAACA...TGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | GTAACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAATGTTCACTTTCTTTGTaGGCTGTAAGAGGGTGCCGT | + |
Preference number: 4 (lower is better) Translates to: VTKNPKRFTVWCQPCTHQCSLSL*AVRGCR Trigger: ACGGCACCCTCTTACAGCTCACAAAGAAAGTGAACA...TTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR GCA 90 bp | TGTAACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCACAGAGTTGCCAGTCTTaGAGCTTTCAGTCCAAATCC | + |
Preference number: 4 (lower is better) Translates to: CNKESQKIYSLVPAMHPPQSCQS*SFQSKS Trigger: GGATTTGGACTGAAAGCTGCAAGACTGGCAACTCTG...TGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR GCA 90 bp | CTATTCACATTAGATGTGCAAATCATTGAAGCCCAAATCACTAGGCTCAAGAGCCAGGGCTCCCAGAGTTaGCAGTCTTGCAGCTTTCAG | + |
Preference number: 4 (lower is better) Translates to: LFTLDVQIIEAQITRLKSQGSQS*QSCSFQ Trigger: CTGAAAGCTGCAAGACTGGCAACTCTGGGAGCCCTG...GCTCTTGAGCCTAGTGATTTGGGCTTCAATGATTTGCACATCTAATGTGAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | AAACGAGATTGTTCTTTGGTCCCCAGGGACCTGTCTCTGAACTCGCAATCTAGCAGGGTTTTCTCAAACTaGGGTAGAAACGTGATTTGG | + |
Preference number: 4 (lower is better) Translates to: KRDCSLVPRDLSLNSQSSRVFSN*GRNVIW Trigger: CCAAATCACGTTTCTACCCCAGTTTGAGAAAACCCT...GCTAGATTGCGAGTTCAGAGACAGGTCCCTGGGGACCAAAGAACAATCTCGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | GCCCAAATCACTAGGCTCAAGAGCAAGACTCATCTAAAAACCCCTCCCTCCTTATGGTTACCACCATACTaGTATTTCACACCCCCAAAG | + |
Preference number: 4 (lower is better) Translates to: AQITRLKSKTHLKTPPSLWLPPY*YFTPPK Trigger: CTTTGGGGGTGTGAAATACCAGTATGGTGGTAACCA...TAAGGAGGGAGGGGTTTTTAGATGAGTCTTGCTCTTGAGCCTAGTGATTTGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | TACTACACAAACAAAGGAATCTCCAAGATGTTCTCCCTCACTTCACTTGGCAACTCCTCGGACTTCTTCTaGCTGGTGAAGTTTCCCCTG | + |
Preference number: 4 (lower is better) Translates to: YYTNKGISKMFSLTSLGNSSDFF*LVKFPL Trigger: CAGGGGAAACTTCACCAGCCAGAAGAAGTCCGAGGA...GTTGCCAAGTGAAGTGAGGGAGAACATCTTGGAGATTCCTTTGTTTGTGTAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR TCA 90 bp | TGTAACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAGGAAAGGTGAATTCTTaGAGATCTCCTCTACCTCCA | + |
Preference number: 4 (lower is better) Translates to: CNKESQKIYSLVPAMHPPGKVNS*RSPLPP Trigger: TGGAGGTAGAGGAGATCTTCAAGAATTCACCTTTCC...TGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR TCA 90 bp | AGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAATGTTCACTTTCTTTGTaGGCTGTAAGAGGGTGCCGT | + |
Preference number: 4 (lower is better) Translates to: RSENVSESTPSCEKTVQKCSLSL*AVRGCR Trigger: ACGGCACCCTCTTACAGCTCACAAAGAAAGTGAACA...TTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTCTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | CAGGTCCTCCTTGTGTGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGAGGGTTTTCTCAAACTaGGGTAGAAACGTGATTTGG | + |
Preference number: 4 (lower is better) Translates to: QVLLVWLSASLFGVLKCVRVFSN*GRNVIW Trigger: CCAAATCACGTTTCTACCCCAGTTTGAGAAAACCCT...CACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCACACAAGGAGGACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CCA 90 bp | GTAACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAATGGTTACCACCATACTaGTATTTCACACCCCCAAAG | + |
Preference number: 4 (lower is better) Translates to: VTKNPKRFTVWCQPCTHQWLPPY*YFTPPK Trigger: CTTTGGGGGTGTGAAATACCAGTATGGTGGTAACCA...TTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | TGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGTGTACTGCAAAGTGCCCCATCTCCCCTTCTTaGTTACCACCATACTGGTAT | + |
Preference number: 4 (lower is better) Translates to: WLSASLFGVLKCVCTAKCPISPS*LPPYWY Trigger: ATACCAGTATGGTGGTAACCAAGAAGGGGAGATGGG...GCACTTTGCAGTACACACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CCA 90 bp | AGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAACCCATCTCCCCTTCTTaGTTACCACCATACTGGTAT | + |
Preference number: 4 (lower is better) Translates to: RSENVSESTPSCEKTVQKPISPS*LPPYWY Trigger: ATACCAGTATGGTGGTAACCAAGAAGGGGAGATGGG...TTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTCTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | GAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAATGCAGGAGGGTTTTCTCAAACTaGGGTAGAAACGTGATTTGG | + |
Preference number: 4 (lower is better) Translates to: ENVSESTPSCEKTVQKCRRVFSN*GRNVIW Trigger: CCAAATCACGTTTCTACCCCAGTTTGAGAAAACCCT...CCTGCATTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CCA 90 bp | TGTAACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGGGTTTTCTCAAACTaGGGTAGAAACGTGATTTGG | + |
Preference number: 4 (lower is better) Translates to: CNKESQKIYSLVPAMHPPRVFSN*GRNVIW Trigger: CCAAATCACGTTTCTACCCCAGTTTGAGAAAACCCT...TGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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3UTR CAA 72 bp | AGGAAAGCAGGACTATACAAGCATAGTGCTAGCACATaGTGCTTAACATTCAAGAAGTCCTGGGTTCGATTC | + |
Preference number: 4 (lower is better) Translates to: RKAGLYKHSAST*CLTFKKSWVRF Trigger: GAATCGAACCCAGGACTTCTTGAATGTTAAGCACAATGTGCTAGCACTATGCTTGTATAGTCCTGCTTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CCA 90 bp | CATGGTTCTCTAATGCTACTCACTGTCCTGACCTGTACCAATATGGACCAAAATAGGGTTTTCTCAAACTaGGGTAGAAACGTGATTTGG | + |
Preference number: 4 (lower is better) Translates to: HGSLMLLTVLTCTNMDQNRVFSN*GRNVIW Trigger: CCAAATCACGTTTCTACCCCAGTTTGAGAAAACCCT...ATTTTGGTCCATATTGGTACAGGTCAGGACAGTGAGTAGCATTAGAGAACCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CCA 90 bp | TACTACACAAACAAAGGAATCTCCAAGATGTTCTCCCTCACTTCACTTGGCAACAGGGTTTTCTCAAACTaGGGTAGAAACGTGATTTGG | + |
Preference number: 4 (lower is better) Translates to: YYTNKGISKMFSLTSLGNRVFSN*GRNVIW Trigger: CCAAATCACGTTTCTACCCCAGTTTGAGAAAACCCT...GTTGCCAAGTGAAGTGAGGGAGAACATCTTGGAGATTCCTTTGTTTGTGTAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS GCA 90 bp | CAGAGCCTGGGCTTTCTGCTCAGGCAGCAAACGGAGTCCGGCCGTTaGTTTCAGAACCACCGGGGTCCTTTCCCAGTGGCTTCTGGGGAT | + |
Preference number: 5 (lower is better) Translates to: QSLGFLLRQQTESGR*FQNHRGPFPVASGD Trigger: ATCCCCAGAAGCCACTGGGAAAGGACCCCGGTGGTTCTGAAAGCAACGGCCGGACTCCGTTTGCTGCCTGAGCAGAAAGCCCAGGCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | CGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTCTGGGGATCGAGTCTTaGGCCACCTCCAAGAGCTCC | + |
Preference number: 5 (lower is better) Translates to: RARLFQRGQKMSLSPRLPLGIES*ATSKSS Trigger: GGAGCTCTTGGAGGTGGCCAAAGACTCGATCCCCAG...AGGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | TCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCCCAGGGCTCCCAGAGTaGCCAGTCTTGCAGCTTTCA | + |
Preference number: 5 (lower is better) Translates to: SGQAFPERSENVSESTPSPGLPE*PVLQLS Trigger: TGAAAGCTGCAAGACTGGCAACTCTGGGAGCCCTGG...GGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | GGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCGTCCATCAGTCCCTTTaGCTTCCAGGGCTCCCAGAG | + |
Preference number: 5 (lower is better) Translates to: GFRARLFQRGQKMSLSPRVHQSL*LPGLPE Trigger: CTCTGGGAGCCCTGGAAGCAAAAGGGACTGATGGAC...GCGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | CCCTCCCTCCTTATAAAACCAGTTAACGGGTTTCGGGCCAGGCTTTTCCAGAGACTGGGGATCGAGTCTTaGGCCACCTCCAAGAGCTCC | + |
Preference number: 5 (lower is better) Translates to: PSLLIKPVNGFRARLFQRLGIES*ATSKSS Trigger: GGAGCTCTTGGAGGTGGCCAAAGACTCGATCCCCAG...TCTCTGGAAAAGCCTGGCCCGAAACCCGTTAACTGGTTTTATAAGGAGGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS TCA 90 bp | GGACCCATCCATGATGCTAACGCTGCCATCTGGGACCAGGAAAGGTaGATTCTTGAAGATCTCCTCTACCTCCAAGAGCAGAGCCTGGGC | + |
Preference number: 5 (lower is better) Translates to: GPIHDANAAIWDQER*ILEDLLYLQEQSLG Trigger: GCCCAGGCTCTGCTCTTGGAGGTAGAGGAGATCTTCAAGAATTCACCTTTCCTGGTCCCAGATGGCAGCGTTAGCATCATGGATGGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | CGGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGGCCCATCTCCCCTTCTaGGTTACCACCATACTGGTA | + |
Preference number: 5 (lower is better) Translates to: RVSGQAFPERSENVSESTAHLPF*VTTILV Trigger: TACCAGTATGGTGGTAACCAAGAAGGGGAGATGGGC...CGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | CGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGCCCATCTCCCCTTCTaGGTTACCACCATACTGGTA | + |
Preference number: 5 (lower is better) Translates to: RARLFQRGQKMSLSPRLPAHLPF*VTTILV Trigger: TACCAGTATGGTGGTAACCAAGAAGGGGAGATGGGC...AGGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | GCCCAAATCACTAGGCTCAAGAGCAAGACTCATCTAAAAACCCCTCCCTCCTTACTGGGGATCGAGTCTTaGGCCACCTCCAAGAGCTCC | + |
Preference number: 5 (lower is better) Translates to: AQITRLKSKTHLKTPPSLLGIES*ATSKSS Trigger: GGAGCTCTTGGAGGTGGCCAAAGACTCGATCCCCAG...TAAGGAGGGAGGGGTTTTTAGATGAGTCTTGCTCTTGAGCCTAGTGATTTGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | TCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATTCACATTAGATGTCCAGGGCTCCCAGAGTaGCCAGTCTTGCAGCTTTCA | + |
Preference number: 5 (lower is better) Translates to: SGASHAPTKWLGAIHIRCPGLPE*PVLQLS Trigger: TGAAAGCTGCAAGACTGGCAACTCTGGGAGCCCTGG...ACATCTAATGTGAATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | GCCCAAATCACTAGGCTCAAGAGCAAGACTCATCTAAAAACCCCTCCCTCCTTAGTCCATCAGTCCCTTTaGCTTCCAGGGCTCCCAGAG | + |
Preference number: 5 (lower is better) Translates to: AQITRLKSKTHLKTPPSLVHQSL*LPGLPE Trigger: CTCTGGGAGCCCTGGAAGCAAAAGGGACTGATGGAC...TAAGGAGGGAGGGGTTTTTAGATGAGTCTTGCTCTTGAGCCTAGTGATTTGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | AAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATGTCCATCAGTCCCTTTaGCTTCCAGGGCTCCCAGAG | + |
Preference number: 5 (lower is better) Translates to: KRFTVWCQPCTHQVVRSYVHQSL*LPGLPE Trigger: CTCTGGGAGCCCTGGAAGCAAAAGGGACTGATGGAC...ATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | AACAATACACACTTTATAGCTAGGGCCCCTGTGTCTGAGGTGTCAGAGACCAGCTGTGGACCTGAGGCTTaGTTGCTGAAGCAGTGCTGC | + |
Preference number: 5 (lower is better) Translates to: NNTHFIARAPVSEVSETSCGPEA*LLKQCC Trigger: GCAGCACTGCTTCAGCAACAAAGCCTCAGGTCCACA...GCTGGTCTCTGACACCTCAGACACAGGGGCCCTAGCTATAAAGTGTGTATTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072061.12 |
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CDS CCA 90 bp | GTAGTAGTAAGAGAAAGCGTAGAAGGCGCTTCCTCGGACTTCTTCTaGCTGGTGAAGTTTCCCCTGTACTACCCTCAGCACTTCCGCATA | + |
Preference number: 5 (lower is better) Translates to: VVVRESVEGASSDFF*LVKFPLYYPQHFRI Trigger: TATGCGGAAGTGCTGAGGGTAGTACAGGGGAAACTTCACCAGCCAGAAGAAGTCCGAGGAAGCGCCTTCTACGCTTTCTCTTACTACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | CGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTAGGAAAGGTGAATTCTaGAAGATCTCCTCTACCTCC | + |
Preference number: 5 (lower is better) Translates to: RARLFQRGQKMSLSPRLPRKGEF*KISSTS Trigger: GGAGGTAGAGGAGATCTTCAAGAATTCACCTTTCCT...AGGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | GTCCCCAGGGACCTGTCTCTGAACTCGCAATCTAGCATGGAGTTCCAAACCTTTCCAGAGTTGCCAGTCTaGCAGCTTTCAGTCCAAATC | + |
Preference number: 5 (lower is better) Translates to: VPRDLSLNSQSSMEFQTFPELPV*QLSVQI Trigger: GATTTGGACTGAAAGCTGCAAGACTGGCAACTCTGG...AAAGGTTTGGAACTCCATGCTAGATTGCGAGTTCAGAGACAGGTCCCTGGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | GAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAATGCAGGCCAGGGCTCCCAGAGTaGCCAGTCTTGCAGCTTTCA | + |
Preference number: 5 (lower is better) Translates to: ENVSESTPSCEKTVQKCRPGLPE*PVLQLS Trigger: TGAAAGCTGCAAGACTGGCAACTCTGGGAGCCCTGG...CCTGCATTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | GCAGGACTCTGTAACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCCAGGGCTCCCAGAGTaGCCAGTCTTGCAGCTTTCA | + |
Preference number: 5 (lower is better) Translates to: AGLCNKESQKIYSLVPAMPGLPE*PVLQLS Trigger: TGAAAGCTGCAAGACTGGCAACTCTGGGAGCCCTGG...CATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTACAGAGTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | GTAACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTCCATCAGTCCCTTTaGCTTCCAGGGCTCCCAGAG | + |
Preference number: 5 (lower is better) Translates to: VTKNPKRFTVWCQPCTHQVHQSL*LPGLPE Trigger: CTCTGGGAGCCCTGGAAGCAAAAGGGACTGATGGAC...TTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | AACAATACACACTTTATAGCTAGGGCCCCTGTGTCTGAGGTGTCAGAGACCAGCGCCCATCTCCCCTTCTaGGTTACCACCATACTGGTA | + |
Preference number: 5 (lower is better) Translates to: NNTHFIARAPVSEVSETSAHLPF*VTTILV Trigger: TACCAGTATGGTGGTAACCAAGAAGGGGAGATGGGC...GCTGGTCTCTGACACCTCAGACACAGGGGCCCTAGCTATAAAGTGTGTATTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CAA 90 bp | CCAGTAATAAAACAATACACGATCTCATCGCACGCACAGCTGCAGAGGCCTCAGCCAGAGTTGCCAGTCTaGCAGCTTTCAGTCCAAATC | + |
Preference number: 5 (lower is better) Translates to: PVIKQYTISSHAQLQRPQPELPV*QLSVQI Trigger: GATTTGGACTGAAAGCTGCAAGACTGGCAACTCTGG...CTGAGGCCTCTGCAGCTGTGCGTGCGATGAGATCGTGTATTGTTTTATTACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CAA 90 bp | TGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGTGTACTGCAAAGTGCCCAGGGCTCCCAGAGTaGCCAGTCTTGCAGCTTTCA | + |
Preference number: 5 (lower is better) Translates to: WLSASLFGVLKCVCTAKCPGLPE*PVLQLS Trigger: TGAAAGCTGCAAGACTGGCAACTCTGGGAGCCCTGG...GCACTTTGCAGTACACACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CAA 90 bp | AGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAAGTCCATCAGTCCCTTTaGCTTCCAGGGCTCCCAGAG | + |
Preference number: 5 (lower is better) Translates to: RSENVSESTPSCEKTVQKVHQSL*LPGLPE Trigger: CTCTGGGAGCCCTGGAAGCAAAAGGGACTGATGGAC...TTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTCTGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | CCCTCCCTCCTTATAAAACCAGTTAACGGGTTTCGGGCCAGGCTTTTCCAGAGACTGCTTCCAACCATCTaGGTAAACAGGCACTTCGAA | + |
Preference number: 5 (lower is better) Translates to: PSLLIKPVNGFRARLFQRLLPTI*VNRHFE Trigger: TTCGAAGTGCCTGTTTACCAAGATGGTTGGAAGCAG...TCTCTGGAAAAGCCTGGCCCGAAACCCGTTAACTGGTTTTATAAGGAGGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | CTATTCACATTAGATGTGCAAATCATTGAAGCCCAAATCACTAGGCTCAAGAGCCTGGGGATCGAGTCTTaGGCCACCTCCAAGAGCTCC | + |
Preference number: 5 (lower is better) Translates to: LFTLDVQIIEAQITRLKSLGIES*ATSKSS Trigger: GGAGCTCTTGGAGGTGGCCAAAGACTCGATCCCCAG...GCTCTTGAGCCTAGTGATTTGGGCTTCAATGATTTGCACATCTAATGTGAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | CCCTCCCTCCTTATAAAACCAGTTAACGGGTTTCGGGCCAGGCTTTTCCAGAGAAGGAAAGGTGAATTCTaGAAGATCTCCTCTACCTCC | + |
Preference number: 5 (lower is better) Translates to: PSLLIKPVNGFRARLFQRRKGEF*KISSTS Trigger: GGAGGTAGAGGAGATCTTCAAGAATTCACCTTTCCT...TCTCTGGAAAAGCCTGGCCCGAAACCCGTTAACTGGTTTTATAAGGAGGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | AACCAGTTAACGGGTTTCGGGCCAGGCTTTTCCAGAGAGGTCAGAAAATGTCTCGTAGCCCCTAGGTGTTaGTTCCAGGGTTTTCTCAAA | + |
Preference number: 5 (lower is better) Translates to: NQLTGFGPGFSREVRKCLVAPRC*FQGFLK Trigger: TTTGAGAAAACCCTGGAACAAACACCTAGGGGCTAC...GAGACATTTTCTGACCTCTCTGGAAAAGCCTGGCCCGAAACCCGTTAACTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | CAGAGAGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCCCAGAGTTGCCAGTCTaGCAGCTTTCAGTCCAAATC | + |
Preference number: 5 (lower is better) Translates to: QRGQKMSLSPRLPVRKLFPELPV*QLSVQI Trigger: GATTTGGACTGAAAGCTGCAAGACTGGCAACTCTGG...GAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTCTGACCTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | CCAGTAATAAAACAATACACGATCTCATCGCACGCACAGCTGCAGAGGCCTCAGCTGCTTCCAACCATCTaGGTAAACAGGCACTTCGAA | + |
Preference number: 5 (lower is better) Translates to: PVIKQYTISSHAQLQRPQLLPTI*VNRHFE Trigger: TTCGAAGTGCCTGTTTACCAAGATGGTTGGAAGCAG...CTGAGGCCTCTGCAGCTGTGCGTGCGATGAGATCGTGTATTGTTTTATTACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CAA 90 bp | AACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGCCCATCTCCCCTTCTaGGTTACCACCATACTGGTA | + |
Preference number: 5 (lower is better) Translates to: NKESQKIYSLVPAMHPPSAHLPF*VTTILV Trigger: TACCAGTATGGTGGTAACCAAGAAGGGGAGATGGGC...ACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS GCA 90 bp | AAACGTATGTCCATCAGTCCCTTTTGCTTCCAGGGCTCCCAGAGTTaGCAGTCTTGCAGCTTTCAGTCCAAATCCCAAGTAACTATGTGT | + |
Preference number: 5 (lower is better) Translates to: KRMSISPFCFQGSQS*QSCSFQSKSQVTMC Trigger: ACACATAGTTACTTGGGATTTGGACTGAAAGCTGCAAGACTGGCAACTCTGGGAGCCCTGGAAGCAAAAGGGACTGATGGACATACGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | AGTAGTATATATAATACACACACAGCATCCACCATGTATGTACCAGACCACATCCTGGGGATCGAGTCTTaGGCCACCTCCAAGAGCTCC | + |
Preference number: 5 (lower is better) Translates to: SSIYNTHTASTMYVPDHILGIES*ATSKSS Trigger: GGAGCTCTTGGAGGTGGCCAAAGACTCGATCCCCAG...GATGTGGTCTGGTACATACATGGTGGATGCTGTGTGTGTATTATATATACTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CAA 90 bp | AAACGAGATTGTTCTTTGGTCCCCAGGGACCTGTCTCTGAACTCGCAATCTAGCAGGAAAGGTGAATTCTaGAAGATCTCCTCTACCTCC | + |
Preference number: 5 (lower is better) Translates to: KRDCSLVPRDLSLNSQSSRKGEF*KISSTS Trigger: GGAGGTAGAGGAGATCTTCAAGAATTCACCTTTCCT...GCTAGATTGCGAGTTCAGAGACAGGTCCCTGGGGACCAAAGAACAATCTCGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | TCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGAGCTATTCACATTAGATGTAGGAAAGGTGAATTCTaGAAGATCTCCTCTACCTCC | + |
Preference number: 5 (lower is better) Translates to: SGASHAPTKWLGAIHIRCRKGEF*KISSTS Trigger: GGAGGTAGAGGAGATCTTCAAGAATTCACCTTTCCT...ACATCTAATGTGAATAGCTCCTAACCACTTGGTGGGTGCATGGCTGGCACCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | CAGGTCCTCCTTGTGTGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGGTAGCCCCTAGGTGTTaGTTCCAGGGTTTTCTCAAA | + |
Preference number: 5 (lower is better) Translates to: QVLLVWLSASLFGVLKCVVAPRC*FQGFLK Trigger: TTTGAGAAAACCCTGGAACAAACACCTAGGGGCTAC...CACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCACACAAGGAGGACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CAA 90 bp | AAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAATGCAGGCCCAGAGTTGCCAGTCTaGCAGCTTTCAGTCCAAATC | + |
Preference number: 5 (lower is better) Translates to: KMSLSPRLPVRKLFRNAGPELPV*QLSVQI Trigger: GATTTGGACTGAAAGCTGCAAGACTGGCAACTCTGG...GCCTGCATTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | GAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAATGCAGGCCAGAGTTGCCAGTCTaGCAGCTTTCAGTCCAAATC | + |
Preference number: 5 (lower is better) Translates to: ENVSESTPSCEKTVQKCRPELPV*QLSVQI Trigger: GATTTGGACTGAAAGCTGCAAGACTGGCAACTCTGG...CCTGCATTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | AATAAAAGATGGCAGCCGCTGGAAAATGATGATGGCTACAACCTCTCAGGACAAGCCCATCTCCCCTTCTaGGTTACCACCATACTGGTA | + |
Preference number: 5 (lower is better) Translates to: NKRWQPLENDDGYNLSGQAHLPF*VTTILV Trigger: TACCAGTATGGTGGTAACCAAGAAGGGGAGATGGGC...TTGTCCTGAGAGGTTGTAGCCATCATCATTTTCCAGCGGCTGCCATCTTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CAA 90 bp | GAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAATGCAGGGTAGCCCCTAGGTGTTaGTTCCAGGGTTTTCTCAAA | + |
Preference number: 5 (lower is better) Translates to: ENVSESTPSCEKTVQKCRVAPRC*FQGFLK Trigger: TTTGAGAAAACCCTGGAACAAACACCTAGGGGCTAC...CCTGCATTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | GCAGGACTCTGTAACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGGTAGCCCCTAGGTGTTaGTTCCAGGGTTTTCTCAAA | + |
Preference number: 5 (lower is better) Translates to: AGLCNKESQKIYSLVPAMVAPRC*FQGFLK Trigger: TTTGAGAAAACCCTGGAACAAACACCTAGGGGCTAC...CATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTACAGAGTCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | AACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGTAGCCCCTAGGTGTTaGTTCCAGGGTTTTCTCAAA | + |
Preference number: 5 (lower is better) Translates to: NKESQKIYSLVPAMHPPSVAPRC*FQGFLK Trigger: TTTGAGAAAACCCTGGAACAAACACCTAGGGGCTAC...ACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | GTAACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAACTGCTTCCAACCATCTaGGTAAACAGGCACTTCGAA | + |
Preference number: 5 (lower is better) Translates to: VTKNPKRFTVWCQPCTHQLLPTI*VNRHFE Trigger: TTCGAAGTGCCTGTTTACCAAGATGGTTGGAAGCAG...TTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | AACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTCTGCTTCCAACCATCTaGGTAAACAGGCACTTCGAA | + |
Preference number: 5 (lower is better) Translates to: NKESQKIYSLVPAMHPPSLLPTI*VNRHFE Trigger: TTCGAAGTGCCTGTTTACCAAGATGGTTGGAAGCAG...ACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | AATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTGGTTAGGCAACCAGTCTCTATGTaGTTCACTTTCTTTGTGAGC | + |
Preference number: 5 (lower is better) Translates to: NPKRFTVWCQPCTHQVVRQPVSM*FTFFVS Trigger: GCTCACAAAGAAAGTGAACAACATAGAGACTGGTTG...CCTAACCACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | TGTAACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGGAAAGGTGAATTCTaGAAGATCTCCTCTACCTCC | + |
Preference number: 5 (lower is better) Translates to: CNKESQKIYSLVPAMHPPRKGEF*KISSTS Trigger: GGAGGTAGAGGAGATCTTCAAGAATTCACCTTTCCT...TGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | AGTAGTATATATAATACACACACAGCATCCACCATGTATGTACCAGACCACATCGGACCTGAGGCTTTGTaGCTGAAGCAGTGCTGCTCA | + |
Preference number: 5 (lower is better) Translates to: SSIYNTHTASTMYVPDHIGPEAL*LKQCCS Trigger: TGAGCAGCACTGCTTCAGCAACAAAGCCTCAGGTCC...GATGTGGTCTGGTACATACATGGTGGATGCTGTGTGTGTATTATATATACTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072061.12 |
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CDS-3UTR CAA 90 bp | AGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAAAGGAAAGGTGAATTCTaGAAGATCTCCTCTACCTCC | + |
Preference number: 5 (lower is better) Translates to: RSENVSESTPSCEKTVQKRKGEF*KISSTS Trigger: GGAGGTAGAGGAGATCTTCAAGAATTCACCTTTCCT...TTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTCTGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | TACTACACAAACAAAGGAATCTCCAAGATGTTCTCCCTCACTTCACTTGGCAACGTAGCCCCTAGGTGTTaGTTCCAGGGTTTTCTCAAA | + |
Preference number: 5 (lower is better) Translates to: YYTNKGISKMFSLTSLGNVAPRC*FQGFLK Trigger: TTTGAGAAAACCCTGGAACAAACACCTAGGGGCTAC...GTTGCCAAGTGAAGTGAGGGAGAACATCTTGGAGATTCCTTTGTTTGTGTAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CAA 90 bp | TACTACACAAACAAAGGAATCTCCAAGATGTTCTCCCTCACTTCACTTGGCAACCTGCTTCCAACCATCTaGGTAAACAGGCACTTCGAA | + |
Preference number: 5 (lower is better) Translates to: YYTNKGISKMFSLTSLGNLLPTI*VNRHFE Trigger: TTCGAAGTGCCTGTTTACCAAGATGGTTGGAAGCAG...GTTGCCAAGTGAAGTGAGGGAGAACATCTTGGAGATTCCTTTGTTTGTGTAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CAA 90 bp | AACAAAGAATCCCAAAAGATTTACAGTCTGGTGCCAGCCATGCACCCACCAAGTCAACCAGTCTCTATGTaGTTCACTTTCTTTGTGAGC | + |
Preference number: 5 (lower is better) Translates to: NKESQKIYSLVPAMHPPSQPVSM*FTFFVS Trigger: GCTCACAAAGAAAGTGAACAACATAGAGACTGGTTG...ACTTGGTGGGTGCATGGCTGGCACCAGACTGTAAATCTTTTGGGATTCTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS-3UTR CAA 90 bp | TGGCTGAGTGCTTCATTATTTGGGGTTTTGAAGTGTGTGTGTACTGCAAAGTGCCAACCAGTCTCTATGTaGTTCACTTTCTTTGTGAGC | + |
Preference number: 5 (lower is better) Translates to: WLSASLFGVLKCVCTAKCQPVSM*FTFFVS Trigger: GCTCACAAAGAAAGTGAACAACATAGAGACTGGTTG...GCACTTTGCAGTACACACACACTTCAAAACCCCAAATAATGAAGCACTCAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CAA 90 bp | AATAAAAGATGGCAGCCGCTGGAAAATGATGATGGCTACAACCTCTCAGGACAACAACCAGTCTCTATGTaGTTCACTTTCTTTGTGAGC | + |
Preference number: 5 (lower is better) Translates to: NKRWQPLENDDGYNLSGQQPVSM*FTFFVS Trigger: GCTCACAAAGAAAGTGAACAACATAGAGACTGGTTG...TTGTCCTGAGAGGTTGTAGCCATCATCATTTTCCAGCGGCTGCCATCTTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000120942.8 |
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CDS-3UTR CAA 90 bp | AGGTCAGAAAATGTCTCTGAGTCCACGCCTTCCTGTGAGAAAACTGTTCAGAAACAACCAGTCTCTATGTaGTTCACTTTCTTTGTGAGC | + |
Preference number: 5 (lower is better) Translates to: RSENVSESTPSCEKTVQKQPVSM*FTFFVS Trigger: GCTCACAAAGAAAGTGAACAACATAGAGACTGGTTG...TTTCTGAACAGTTTTCTCACAGGAAGGCGTGGACTCAGAGACATTTTCTGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS CAA 90 bp | GCAGAGCCTGGGCTTTCTGCTCAGGCAGCAAACGGAGTCCGGCCGTaGCTTTCAGAACCACCGGGGTCCTTTCCCAGTGGCTTCTGGGGA | + |
Preference number: 6 (lower is better) Translates to: AEPGLSAQAANGVRP*LSEPPGSFPSGFWG Trigger: TCCCCAGAAGCCACTGGGAAAGGACCCCGGTGGTTCTGAAAGCAACGGCCGGACTCCGTTTGCTGCCTGAGCAGAAAGCCCAGGCTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS CAA 72 bp | GGGGTCCTTTCCCAGTGGCTTCTGGGGATCGAGTCTTaGGCCACCTCCAAGAGCTCCTGGACAGTCTCAGCA | + |
Preference number: 6 (lower is better) Translates to: GVLSQWLLGIES*ATSKSSWTVSA Trigger: TGCTGAGACTGTCCAGGAGCTCTTGGAGGTGGCCAAAGACTCGATCCCCAGAAGCCACTGGGAAAGGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS CAA 90 bp | CCCCAGGAAGTGGCCATATTCTTCCCAAGATGTGGACCTGAGGCTTaGTTGCTGAAGCAGTGCTGCTCACACTCCTGTGGAGGCAGGGTC | + |
Preference number: 6 (lower is better) Translates to: PQEVAIFFPRCGPEA*LLKQCCSHSCGGRV Trigger: GACCCTGCCTCCACAGGAGTGTGAGCAGCACTGCTTCAGCAACAAAGCCTCAGGTCCACATCTTGGGAAGAATATGGCCACTTCCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072061.12 |
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CDS CCA 72 bp | TTCTTGAAGATCTCCTCTACCTCCAAGAGCAGAGCCTaGGCTTTCTGCTCAGGCAGCAAACGGAGTCCGGCC | + |
Preference number: 6 (lower is better) Translates to: FLKISSTSKSRA*AFCSGSKRSPA Trigger: GGCCGGACTCCGTTTGCTGCCTGAGCAGAAAGCCCAGGCTCTGCTCTTGGAGGTAGAGGAGATCTTCAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS TCA 72 bp | TATTCTTCCCAAGATGTGGACCTGAGGCTTTGTTGCTaGAGCAGTGCTGCTCACACTCCTGTGGAGGCAGGG | + |
Preference number: 6 (lower is better) Translates to: YSSQDVDLRLCC*SSAAHTPVEAG Trigger: CCCTGCCTCCACAGGAGTGTGAGCAGCACTGCTTCAGCAACAAAGCCTCAGGTCCACATCTTGGGAAGAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072061.12 |
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CDS CCA 72 bp | AGAGAAAGCGTAGAAGGCGCTTCCTCGGACTTCTTCTaGCTGGTGAAGTTTCCCCTGTACTACCCTCAGCAC | + |
Preference number: 6 (lower is better) Translates to: RESVEGASSDFF*LVKFPLYYPQH Trigger: GTGCTGAGGGTAGTACAGGGGAAACTTCACCAGCCAGAAGAAGTCCGAGGAAGCGCCTTCTACGCTTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS CAA 72 bp | GCCATATTCTTCCCAAGATGTGGACCTGAGGCTTTGTaGCTGAAGCAGTGCTGCTCACACTCCTGTGGAGGC | + |
Preference number: 6 (lower is better) Translates to: AIFFPRCGPEAL*LKQCCSHSCGG Trigger: GCCTCCACAGGAGTGTGAGCAGCACTGCTTCAGCAACAAAGCCTCAGGTCCACATCTTGGGAAGAATATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072061.12 |
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CDS TCA 72 bp | CCAGGAAGTGGCCATATTCTTCCCAAGATGTGGACCTaGGGCTTTGTTGCTGAAGCAGTGCTGCTCACACTC | + |
Preference number: 6 (lower is better) Translates to: PGSGHILPKMWT*GFVAEAVLLTL Trigger: GAGTGTGAGCAGCACTGCTTCAGCAACAAAGCCTCAGGTCCACATCTTGGGAAGAATATGGCCACTTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072061.12 |
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CDS CAA 72 bp | CTAACGCTGCCATCTGGGACCAGGAAAGGTGAATTCTaGAAGATCTCCTCTACCTCCAAGAGCAGAGCCTGG | + |
Preference number: 6 (lower is better) Translates to: LTLPSGTRKGEF*KISSTSKSRAW Trigger: CCAGGCTCTGCTCTTGGAGGTAGAGGAGATCTTCAAGAATTCACCTTTCCTGGTCCCAGATGGCAGCGTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS CAA 72 bp | GTGGCCATATTCTTCCCAAGATGTGGACCTGAGGCTTaGTTGCTGAAGCAGTGCTGCTCACACTCCTGTGGA | + |
Preference number: 6 (lower is better) Translates to: VAIFFPRCGPEA*LLKQCCSHSCG Trigger: TCCACAGGAGTGTGAGCAGCACTGCTTCAGCAACAAAGCCTCAGGTCCACATCTTGGGAAGAATATGGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072061.12 |
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CDS GCA 72 bp | TCCATCAGTCCCTTTTGCTTCCAGGGCTCCCAGAGTTaGCAGTCTTGCAGCTTTCAGTCCAAATCCCAAGTA | + |
Preference number: 6 (lower is better) Translates to: SISPFCFQGSQS*QSCSFQSKSQV Trigger: TACTTGGGATTTGGACTGAAAGCTGCAAGACTGGCAACTCTGGGAGCCCTGGAAGCAAAAGGGACTGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS CCA 72 bp | TCAAAGCCCATCTCCCCTTCTTGGTTACCACCATACTaGTATTTCACACCCCCAAAGATCCACTCTGCTTCC | + |
Preference number: 6 (lower is better) Translates to: SKPISPSWLPPY*YFTPPKIHSAS Trigger: GGAAGCAGAGTGGATCTTTGGGGGTGTGAAATACCAGTATGGTGGTAACCAAGAAGGGGAGATGGGCTTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |
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CDS CAA 90 bp | ACTGGTATTTCACACCCCCAAAGATCCACTCTGCTTCCAACCATCTaGGTAAACAGGCACTTCGAAACGTATGTCCATCAGTCCCTTTTG | + |
Preference number: 6 (lower is better) Translates to: TGISHPQRSTLLPTI*VNRHFETYVHQSLL Trigger: CAAAAGGGACTGATGGACATACGTTTCGAAGTGCCTGTTTACCAAGATGGTTGGAAGCAGAGTGGATCTTTGGGGGTGTGAAATACCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000021662.12 ENSMUST00000072061.12 ENSMUST00000110272.9 ENSMUST00000117286.2 ENSMUST00000120942.8 ENSMUST00000122194.8 |