Pregenerated sensors for ENSA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038619Ensembl transcript IDs: ENSMUST00000037983.6, ENSMUST00000058230.13
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCAGGAGCCAGCACAGGACCCGAGTGGGCAGCGTCTCACGATCTaGTGGAGCCCCAGGAAGCATCACTCAACTTGGCCACTGTGGACG | + |
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Preference number: 1 (lower is better) Translates to: GQEPAQDPSGQRLTI*WSPRKHHSTWPLWT Trigger: CGTCCACAGTGGCCAAGTTGAGTGATGCTTCCTGGGGCTCCACCAGATCGTGAGACGCTGCCCACTCGGGTCCTGTGCTGGCTCCTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR CCA 90 bp | CAGGAGCCAGCACAGGACCCGAGTGGGCAGCGTCTCACGATCTGGTaGAGCCCCAGGAAGCATCACTCAACTTGGCCACTGTGGACGAAC | + |
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Preference number: 1 (lower is better) Translates to: QEPAQDPSGQRLTIW*SPRKHHSTWPLWTN Trigger: GTTCGTCCACAGTGGCCAAGTTGAGTGATGCTTCCTGGGGCTCCACCAGATCGTGAGACGCTGCCCACTCGGGTCCTGTGCTGGCTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR GCA 90 bp | GATGCCACGTCAATGAGCCTGTCTCCTCAGGCCTATCCAGTCTGCTaGCAGAGCAGCTTTGTAGCAGCTAGGGTCAACAGCAGACCCAGG | + |
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Preference number: 1 (lower is better) Translates to: DATSMSLSPQAYPVC*QSSFVAARVNSRPR Trigger: CCTGGGTCTGCTGTTGACCCTAGCTGCTACAAAGCTGCTCTGGCAGCAGACTGGATAGGCCTGAGGAGACAGGCTCATTGACGTGGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR TCA 90 bp | ACACAGTGCACAGCCACTGGCAGCGGTGAAGAGGAACCTCAGCACTaGGGTGCTGACTGGCAGAGGCCAGGGTCAAACCACATACTTGTT | + |
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Preference number: 1 (lower is better) Translates to: TQCTATGSGEEEPQH*GADWQRPGSNHILV Trigger: AACAAGTATGTGGTTTGACCCTGGCCTCTGCCAGTCAGCACCTCAGTGCTGAGGTTCCTCTTCACCGCTGCCAGTGGCTGTGCACTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR GCA 90 bp | AAGGGCACAGTGCAATCTGGAAAGGGGAGAGAGACTGCACCATCTTaGTCTTTTGAGCAGTTCTCACTCTGGCCCTCTCTGTCGATGACG | + |
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Preference number: 1 (lower is better) Translates to: KGTVQSGKGRETAPS*SFEQFSLWPSLSMT Trigger: CGTCATCGACAGAGAGGGCCAGAGTGAGAACTGCTCAAAAGAGCAAGATGGTGCAGTCTCTCTCCCCTTTCCAGATTGCACTGTGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR GCA 90 bp | TTCTCAGCATGTCAATTCAGCCTTGGGACACTGAACCTGTCACACTaGTCCACGATAGCCCGTCTAAGGACTTGCTCCTCCAACAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: FSACQFSLGTLNLSH*STIARLRTCSSNRR Trigger: TCTCCTGTTGGAGGAGCAAGTCCTTAGACGGGCTATCGTGGAGCAGTGTGACAGGTTCAGTGTCCCAAGGCTGAATTGACATGCTGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR CCA 90 bp | GAGCATCTCCTTCACTCTACCTTTCTCAGCATGTCAATTCAGCCTTaGGACACTGAACCTGTCACACTGCTCCACGATAGCCCGTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: EHLLHSTFLSMSIQP*DTEPVTLLHDSPSK Trigger: CTTAGACGGGCTATCGTGGAGCAGTGTGACAGGTTCAGTGTCCCAAGGCTGAATTGACATGCTGAGAAAGGTAGAGTGAAGGAGATGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR GCA 90 bp | CTAACACACACATCCACAAACTCGCCAGACATCCTAAGGGCACAGTaGAATCTGGAAAGGGGAGAGAGACTGCACCATCTTGCTCTTTTG | + |
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Preference number: 1 (lower is better) Translates to: LTHTSTNSPDILRAQ*NLERGERLHHLALL Trigger: CAAAAGAGCAAGATGGTGCAGTCTCTCTCCCCTTTCCAGATTGCACTGTGCCCTTAGGATGTCTGGCGAGTTTGTGGATGTGTGTGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR GCA 90 bp | ACTTGCATCTTCCACATTCTCACCACAGGAAAAGCTGCAGCACTCTaGACTCCTAGTCTTTCCTACTCTTGGGTCTCTACTGGGCTATCA | + |
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Preference number: 1 (lower is better) Translates to: TCIFHILTTGKAAAL*TPSLSYSWVSTGLS Trigger: TGATAGCCCAGTAGAGACCCAAGAGTAGGAAAGACTAGGAGTGCAGAGTGCTGCAGCTTTTCCTGTGGTGAGAATGTGGAAGATGCAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR CCA 90 bp | TGTTTACAGACGAGGAACAGGATCAATTCAGAGAGGCTACAGACCTaGCCAAGCTCACACATCAGTGCTGTTGAGCTTGACAAAAACTAC | + |
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Preference number: 1 (lower is better) Translates to: CLQTRNRINSERLQT*PSSHISAVELDKNY Trigger: GTAGTTTTTGTCAAGCTCAACAGCACTGATGTGTGAGCTTGGCCAGGTCTGTAGCCTCTCTGAATTGATCCTGTTCCTCGTCTGTAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR CCA 90 bp | AATCTATTTCTACCCAATCTGAATGATGGCCAGAGACCTGGGCAGTaGCCAATCAGGAGAAGGGCATATTTACATGTCCTTCCCCTAACA | + |
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Preference number: 1 (lower is better) Translates to: NLFLPNLNDGQRPGQ*PIRRRAYLHVLPLT Trigger: TGTTAGGGGAAGGACATGTAAATATGCCCTTCTCCTGATTGGCCACTGCCCAGGTCTCTGGCCATCATTCAGATTGGGTAGAAATAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR TCA 90 bp | AGAAGCAAGCCTGAGAAGTGCAGCTTGTTCCTTGGCATCCAAGAGTaGCACTATTTGATTCTGATTTCCTTTCCCCTTTCTCATCCCTAT | + |
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Preference number: 1 (lower is better) Translates to: RSKPEKCSLFLGIQE*HYLILISFPLSHPY Trigger: ATAGGGATGAGAAAGGGGAAAGGAAATCAGAATCAAATAGTGTCACTCTTGGATGCCAAGGAACAAGCTGCACTTCTCAGGCTTGCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR TCA 90 bp | TGCACTCCTAGTCTTTCCTACTCTTGGGTCTCTACTGGGCTATCATaGGGGTGTACAAGTTTCAATTTACCCAAAGAAATGAACTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: CTPSLSYSWVSTGLS*GCTSFNLPKEMNSE Trigger: CTCTGAGTTCATTTCTTTGGGTAAATTGAAACTTGTACACCCTCATGATAGCCCAGTAGAGACCCAAGAGTAGGAAAGACTAGGAGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR GCA 90 bp | CACAGGACCCGAGTGGGCAGCGTCTCACGATCTGGTGGAGCCCCAGGAAGCATCAGCAAGACAGGCTGCTaGCTCCCTCCCTGCACCCTC | + |
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Preference number: 2 (lower is better) Translates to: HRTRVGSVSRSGGAPGSISKTGC*LPPCTL Trigger: GAGGGTGCAGGGAGGGAGGCAGCAGCCTGTCTTGCT...GATGCTTCCTGGGGCTCCACCAGATCGTGAGACGCTGCCCACTCGGGTCCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR TCA 90 bp | CACAGGACCCGAGTGGGCAGCGTCTCACGATCTGGTGGAGCCCCAGGAAGCATCGAGGAACCTCAGCACTaGGGTGCTGACTGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: HRTRVGSVSRSGGAPGSIEEPQH*GADWQR Trigger: CCTCTGCCAGTCAGCACCTCAGTGCTGAGGTTCCTC...GATGCTTCCTGGGGCTCCACCAGATCGTGAGACGCTGCCCACTCGGGTCCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGGAGCCAGCACAGGACCCGAGTGGGCAGCGTCTCACGATCTGGTGGAGCCAGGCCTATCCAGTCTaGTGCCAGAGCAGCTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: GQEPAQDPSGQRLTIWWSQAYPV*CQSSFV Trigger: TACAAAGCTGCTCTGGCAGCAGACTGGATAGGCCTG...GCTCCACCAGATCGTGAGACGCTGCCCACTCGGGTCCTGTGCTGGCTCCTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR TCA 90 bp | CACAGGACCCGAGTGGGCAGCGTCTCACGATCTGGTGGAGCCCCAGGAAGCATCAAGATGCCACGTCAATaGGCCTGTCTCCTCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: HRTRVGSVSRSGGAPGSIKMPRQ*ACLLRP Trigger: AGGCCTGAGGAGACAGGCTCATTGACGTGGCATCTT...GATGCTTCCTGGGGCTCCACCAGATCGTGAGACGCTGCCCACTCGGGTCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGGAGCCAGCACAGGACCCGAGTGGGCAGCGTCTCACGATCTGGTGGAGCACCATCTTGCTCTTTTaGGCAGTTCTCACTCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: GQEPAQDPSGQRLTIWWSTILLF*AVLTLA Trigger: GGCCAGAGTGAGAACTGCTCAAAAGAGCAAGATGGT...GCTCCACCAGATCGTGAGACGCTGCCCACTCGGGTCCTGTGCTGGCTCCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGGAGCCAGCACAGGACCCGAGTGGGCAGCGTCTCACGATCTGGTGGAGCAAACTTTACACTCCTTaGGAAGCAGGGCAGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: GQEPAQDPSGQRLTIWWSKLYTP*EAGQLL Trigger: CAACAGCTGCCCTGCTTCTCAAGGAGTGTAAAGTTT...GCTCCACCAGATCGTGAGACGCTGCCCACTCGGGTCCTGTGCTGGCTCCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGGAGCCAGCACAGGACCCGAGTGGGCAGCGTCTCACGATCTGGTGGAGCTCAACTTGGCCACTGTaGACGAACAAGGAAGAAACA | + |
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Preference number: 2 (lower is better) Translates to: GQEPAQDPSGQRLTIWWSSTWPL*TNKEET Trigger: TGTTTCTTCCTTGTTCGTCCACAGTGGCCAAGTTGA...GCTCCACCAGATCGTGAGACGCTGCCCACTCGGGTCCTGTGCTGGCTCCTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR GCA 90 bp | CACAGGACCCGAGTGGGCAGCGTCTCACGATCTGGTGGAGCCCCAGGAAGCATCTCCAACAGGAGAACTTaGATCTTCCACATTCTCACC | + |
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Preference number: 2 (lower is better) Translates to: HRTRVGSVSRSGGAPGSISNRRT*IFHILT Trigger: GGTGAGAATGTGGAAGATGCAAGTTCTCCTGTTGGA...GATGCTTCCTGGGGCTCCACCAGATCGTGAGACGCTGCCCACTCGGGTCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR CCA 90 bp | CACAGGACCCGAGTGGGCAGCGTCTCACGATCTGGTGGAGCCCCAGGAAGCATCATGTCAATTCAGCCTTaGGACACTGAACCTGTCACA | + |
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Preference number: 2 (lower is better) Translates to: HRTRVGSVSRSGGAPGSIMSIQP*DTEPVT Trigger: TGTGACAGGTTCAGTGTCCCAAGGCTGAATTGACAT...GATGCTTCCTGGGGCTCCACCAGATCGTGAGACGCTGCCCACTCGGGTCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR TCA 90 bp | TTACCATCCCTCACCTTACAGTCAACCACAGCAACCCAGAGGTTCAGGAGAACGTGGCAAGCTGAGCTCTaGCTAGGTGCCCATTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: LPSLTLQSTTATQRFRRTWQAEL*LGAHSL Trigger: CAGGGAATGGGCACCTAGTCAGAGCTCAGCTTGCCA...CGTTCTCCTGAACCTCTGGGTTGCTGTGGTTGACTGTAAGGTGAGGGATGGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR TCA 90 bp | CACAGGACCCGAGTGGGCAGCGTCTCACGATCTGGTGGAGCCCCAGGAAGCATCATTTACCCAAAGAAATaGACTCAGAGCCCATCTTCA | + |
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Preference number: 2 (lower is better) Translates to: HRTRVGSVSRSGGAPGSIIYPKK*TQSPSS Trigger: TGAAGATGGGCTCTGAGTTCATTTCTTTGGGTAAAT...GATGCTTCCTGGGGCTCCACCAGATCGTGAGACGCTGCCCACTCGGGTCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR TCA 90 bp | ATTCAAAGAGTGCTTCTCTCTTCAGAGCTGAACCTGAACCCCTTACCATCCCTCCCCTGGATGGCAAGCTaGGCTCTGACTAGGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: IQRVLLSSELNLNPLPSLPWMAS*ALTRCP Trigger: TGGGCACCTAGTCAGAGCTCAGCTTGCCATCCAGGG...GAGGGATGGTAAGGGGTTCAGGTTCAGCTCTGAAGAGAGAAGCACTCTTTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTTTCCTAGTGAAGGCTCACAGGAGCCACACAGTGCACAGCCACTGGCAGTATTTCTACCCAATCTaGATGATGGCCAGAGACCTG | + |
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Preference number: 2 (lower is better) Translates to: GGFLVKAHRSHTVHSHWQYFYPI*MMARDL Trigger: CAGGTCTCTGGCCATCATTCAGATTGGGTAGAAATA...CTGCCAGTGGCTGTGCACTGTGTGGCTCCTGTGAGCCTTCACTAGGAAACCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR TCA 90 bp | ACTGAGGTGCTGACTGGCAGAGGCCAGGGTCAAACCACATACTTGTTTGGAGTGGCTAAGAAGCAAGCCTaGGAAGTGCAGCTTGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: TEVLTGRGQGQTTYLFGVAKKQA*EVQLVP Trigger: AGGAACAAGCTGCACTTCTCAGGCTTGCTTCTTAGC...CACTCCAAACAAGTATGTGGTTTGACCCTGGCCTCTGCCAGTCAGCACCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR CCA 90 bp | AATCTATTTCTACCCAATCTGAATGATGGCCAGAGACCTGGGCAGTGGCCAATCGGGCACAGTGCAATCTaGAAAGGGGAGAGAGACTGC | + |
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Preference number: 2 (lower is better) Translates to: NLFLPNLNDGQRPGQWPIGHSAI*KGERDC Trigger: GCAGTCTCTCTCCCCTTTCCAGATTGCACTGTGCCC...GATTGGCCACTGCCCAGGTCTCTGGCCATCATTCAGATTGGGTAGAAATAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCCCTTTCTCATCCCTATCTCCAGCTCATTGTGTGTATGTGTACACACTAGAGAGTCAAAGAGTTTaGGGGCCAGGGAGACCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LSPFSSLSPAHCVYVYTLESQRV*GPGRPG Trigger: CCCTGGTCTCCCTGGCCCCCAAACTCTTTGACTCTC...TAGTGTGTACACATACACACAATGAGCTGGAGATAGGGATGAGAAAGGGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR TCA 90 bp | ACTGAGGTGCTGACTGGCAGAGGCCAGGGTCAAACCACATACTTGTTTGGAGTGACATGGTTGGGACATTaGAGAAACTATACAGTGATG | + |
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Preference number: 2 (lower is better) Translates to: TEVLTGRGQGQTTYLFGVTWLGH*RNYTVM Trigger: CATCACTGTATAGTTTCTTCAATGTCCCAACCATGT...CACTCCAAACAAGTATGTGGTTTGACCCTGGCCTCTGCCAGTCAGCACCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR GCA 90 bp | AATCTATTTCTACCCAATCTGAATGATGGCCAGAGACCTGGGCAGTGGCCAATCACATCTGAAGCAAGATaGCACGTCAATGAGCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: NLFLPNLNDGQRPGQWPITSEAR*HVNEPV Trigger: GACAGGCTCATTGACGTGGCATCTTGCTTCAGATGT...GATTGGCCACTGCCCAGGTCTCTGGCCATCATTCAGATTGGGTAGAAATAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR TCA 90 bp | AATCTATTTCTACCCAATCTGAATGATGGCCAGAGACCTGGGCAGTGGCCAATCAAATCTCCTCTCTTTTaGAGGTCCCCTAAACACCCA | + |
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Preference number: 2 (lower is better) Translates to: NLFLPNLNDGQRPGQWPIKSPLF*RSPKHP Trigger: TGGGTGTTTAGGGGACCTTCAAAAGAGAGGAGATTT...GATTGGCCACTGCCCAGGTCTCTGGCCATCATTCAGATTGGGTAGAAATAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGAGCATCTCCTTCACTCTACCTTTCTCAGCATGTCAATTCAGCCTTGGAGTCTTTCCTACTCTTaGGTCTCTACTGGGCTATCA | + |
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Preference number: 2 (lower is better) Translates to: HREHLLHSTFLSMSIQPWSLSYS*VSTGLS Trigger: TGATAGCCCAGTAGAGACCCAAGAGTAGGAAAGACT...CCAAGGCTGAATTGACATGCTGAGAAAGGTAGAGTGAAGGAGATGCTCTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCCCTTTCTCATCCCTATCTCCAGCTCATTGTGTGTATGTGTACACACTAGCAGACCCAGGAAAATaGGCAGAGTCAAGACACATC | + |
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Preference number: 2 (lower is better) Translates to: LSPFSSLSPAHCVYVYTLADPGK*AESRHI Trigger: GATGTGTCTTGACTCTGCCCATTTTCCTGGGTCTGC...TAGTGTGTACACATACACACAATGAGCTGGAGATAGGGATGAGAAAGGGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR CAA 90 bp | AGAGGCTACAGACCTGGCCAAGCTCACACATCAGTGCTGTTGAGCTaGACAAAAACTACAGCCCAAGTATTTCAACTCCTAAACTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: RGYRPGQAHTSVLLS*TKTTAQVFQLLNSF Trigger: GAAAGAGTTTAGGAGTTGAAATACTTGGGCTGTAGTTTTTGTCAAGCTCAACAGCACTGATGTGTGAGCTTGGCCAGGTCTGTAGCCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR CAA 90 bp | ATTCAGAGAGGCTACAGACCTGGCCAAGCTCACACATCAGTGCTGTaGAGCTTGACAAAAACTACAGCCCAAGTATTTCAACTCCTAAAC | + |
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Preference number: 2 (lower is better) Translates to: IQRGYRPGQAHTSVL*SLTKTTAQVFQLLN Trigger: GTTTAGGAGTTGAAATACTTGGGCTGTAGTTTTTGTCAAGCTCAACAGCACTGATGTGTGAGCTTGGCCAGGTCTGTAGCCTCTCTGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR CAA 90 bp | TTCTCTTTCTCTCTCAAAAAGGCTATGATACCTATGAGACTGTTGTaGGAAGCTATGGCCCTTAAATCTCAAACTCTCTCTCGTCCCATG | + |
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Preference number: 2 (lower is better) Translates to: FSFSLKKAMIPMRLL*EAMALKSQTLSRPM Trigger: CATGGGACGAGAGAGAGTTTGAGATTTAAGGGCCATAGCTTCCAACAACAGTCTCATAGGTATCATAGCCTTTTTGAGAGAGAAAGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR CAA 90 bp | TTGTTCTCTTTCTCTCTCAAAAAGGCTATGATACCTATGAGACTGTaGTTGGAAGCTATGGCCCTTAAATCTCAAACTCTCTCTCGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LFSFSLKKAMIPMRL*LEAMALKSQTLSRP Trigger: GGGACGAGAGAGAGTTTGAGATTTAAGGGCCATAGCTTCCAACAACAGTCTCATAGGTATCATAGCCTTTTTGAGAGAGAAAGAGAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR CCA 72 bp | CCAGCACAGGACCCGAGTGGGCAGCGTCTCACGATCTaGTGGAGCCCCAGGAAGCATCACTCAACTTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: PAQDPSGQRLTI*WSPRKHHSTWP Trigger: TGGCCAAGTTGAGTGATGCTTCCTGGGGCTCCACCAGATCGTGAGACGCTGCCCACTCGGGTCCTGTGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR CCA 72 bp | GGAGCAGCTGCTCCAGCTGGCAGTAGCTCTAAGCTCTaGGGACCAGCTCCCTTCATCCCTTCTTCCTCCATG | + |
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Preference number: 3 (lower is better) Translates to: GAAAPAGSSSKL*GPAPFIPSSSM Trigger: CATGGAGGAAGAAGGGATGAAGGGAGCTGGTCCCCAGAGCTTAGAGCTACTGCCAGCTGGAGCAGCTGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR TCA 72 bp | CTCTGTAGCCCAGGCTACCAGCCTGCCTCAGTTTGTTaGACAGCTGGGATGACAAGCCAGCTTGATTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: LCSPGYQPASVC*TAGMTSQLDFP Trigger: AGGGAAATCAAGCTGGCTTGTCATCCCAGCTGTTCAACAAACTGAGGCAGGCTGGTAGCCTGGGCTACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR GCA 72 bp | TGTCAATTCAGCCTTGGGACACTGAACCTGTCACACTaGTCCACGATAGCCCGTCTAAGGACTTGCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: CQFSLGTLNLSH*STIARLRTCSS Trigger: GGAGGAGCAAGTCCTTAGACGGGCTATCGTGGAGCAGTGTGACAGGTTCAGTGTCCCAAGGCTGAATTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR TCA 72 bp | CTCTCGTCCCATGTAGCACTTCTGGCTCTACAGAGCTaGGGTTCAGCCATGGGCCTGCCTCAATTTTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: LSSHVALLALQS*GSAMGLPQFWF Trigger: AAACCAAAATTGAGGCAGGCCCATGGCTGAACCTCAGCTCTGTAGAGCCAGAAGTGCTACATGGGACGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR TCA 72 bp | TGGAAAGGGGAGAGAGACTGCACCATCTTGCTCTTTTaGGCAGTTCTCACTCTGGCCCTCTCTGTCGATGAC | + |
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Preference number: 3 (lower is better) Translates to: WKGERDCTILLF*AVLTLALSVDD Trigger: GTCATCGACAGAGAGGGCCAGAGTGAGAACTGCTCAAAAGAGCAAGATGGTGCAGTCTCTCTCCCCTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR TCA 72 bp | GCTACCAGCCTGCCTCAGTTTGTTGAACAGCTGGGATaGCAAGCCAGCTTGATTTCCCTATTTCTCCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: ATSLPQFVEQLG*QASLISLFLLS Trigger: GGACAGGAGAAATAGGGAAATCAAGCTGGCTTGTCATCCCAGCTGTTCAACAAACTGAGGCAGGCTGGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR GCA 72 bp | GCCCGTCTAAGGACTTGCTCCTCCAACAGGAGAACTTaGATCTTCCACATTCTCACCACAGGAAAAGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: ARLRTCSSNRRT*IFHILTTGKAA Trigger: TGCAGCTTTTCCTGTGGTGAGAATGTGGAAGATGCAAGTTCTCCTGTTGGAGGAGCAAGTCCTTAGACGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR GCA 72 bp | ACATCCACAAACTCGCCAGACATCCTAAGGGCACAGTaGAATCTGGAAAGGGGAGAGAGACTGCACCATCTT | + |
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Preference number: 3 (lower is better) Translates to: TSTNSPDILRAQ*NLERGERLHHL Trigger: AAGATGGTGCAGTCTCTCTCCCCTTTCCAGATTGCACTGTGCCCTTAGGATGTCTGGCGAGTTTGTGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR CCA 72 bp | ACGAGGAACAGGATCAATTCAGAGAGGCTACAGACCTaGCCAAGCTCACACATCAGTGCTGTTGAGCTTGAC | + |
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Preference number: 3 (lower is better) Translates to: TRNRINSERLQT*PSSHISAVELD Trigger: GTCAAGCTCAACAGCACTGATGTGTGAGCTTGGCCAGGTCTGTAGCCTCTCTGAATTGATCCTGTTCCTCGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR CCA 72 bp | CTTCACTCTACCTTTCTCAGCATGTCAATTCAGCCTTaGGACACTGAACCTGTCACACTGCTCCACGATAGC | + |
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Preference number: 3 (lower is better) Translates to: LHSTFLSMSIQP*DTEPVTLLHDS Trigger: GCTATCGTGGAGCAGTGTGACAGGTTCAGTGTCCCAAGGCTGAATTGACATGCTGAGAAAGGTAGAGTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR GCA 72 bp | TTCCACATTCTCACCACAGGAAAAGCTGCAGCACTCTaGACTCCTAGTCTTTCCTACTCTTGGGTCTCTACT | + |
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Preference number: 3 (lower is better) Translates to: FHILTTGKAAAL*TPSLSYSWVST Trigger: AGTAGAGACCCAAGAGTAGGAAAGACTAGGAGTGCAGAGTGCTGCAGCTTTTCCTGTGGTGAGAATGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR GCA 72 bp | TTCTGGCTCTACAGAGCTGAGGTTCAGCCATGGGCCTaGCTCAATTTTGGTTTTATGATGACCAGAAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: FWLYRAEVQPWA*LNFGFMMTRRV Trigger: TACCCTTCTGGTCATCATAAAACCAAAATTGAGGCAGGCCCATGGCTGAACCTCAGCTCTGTAGAGCCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR-3UTR CAA 90 bp | CTTTCCCCTTTCTCATCCCTATCTCCAGCTCATTGTGTGTATGTGTACACACTACACACATCAGTGCTGTaGAGCTTGACAAAAACTACA | + |
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Preference number: 3 (lower is better) Translates to: LSPFSSLSPAHCVYVYTLHTSVL*SLTKTT Trigger: TGTAGTTTTTGTCAAGCTCAACAGCACTGATGTGTG...TAGTGTGTACACATACACACAATGAGCTGGAGATAGGGATGAGAAAGGGGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR GCA 72 bp | CCTCAACTTGTTCTGCAGAACCAGAGAGACCTCGTCTaGTTTAAAGAACACAATTCCTTTTCTCTGACACTA | + |
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Preference number: 3 (lower is better) Translates to: PQLVLQNQRDLV*FKEHNSFSLTL Trigger: TAGTGTCAGAGAAAAGGAATTGTGTTCTTTAAAGCAGACGAGGTCTCTCTGGTTCTGCAGAACAAGTTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037983.6 ENSMUST00000058230.13 |
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| CDS-3UTR CCA 90 bp | GGGCAGGAGCCAGCACAGGACCCGAGTGGGCAGCGTCTCACGATCTGGTGGAGCGTCTGCTCCTGCACTTaGCAGCTGCTTGTTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: GQEPAQDPSGQRLTIWWSVCSCT*QLLVLH Trigger: ATGAAGAACAAGCAGCTGCCAAGTGCAGGAGCAGAC...GCTCCACCAGATCGTGAGACGCTGCCCACTCGGGTCCTGTGCTGGCTCCTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037983.6 ENSMUST00000058230.13 |
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| CDS-3UTR GCA 90 bp | CTCACTCTGGCCCTCTCTGTCGATGACGAGCAGGTGGCATTTAGTAAGATCCAGTTCTCCTGTGTATCCTaGTTCTCCTCGCCGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LTLALSVDDEQVAFSKIQFSCVS*FSSPVS Trigger: GGAGACCGGCGAGGAGAAGCAGGATACACAGGAGAA...CTGGATCTTACTAAATGCCACCTGCTCGTCATCGACAGAGAGGGCCAGAGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| 3UTR CAA 72 bp | CCTGTCACACTGCTCCACGATAGCCCGTCTAAGGACTaGCTCCTCCAACAGGAGAACTTGCATCTTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: PVTLLHDSPSKD*LLQQENLHLPH Trigger: ATGTGGAAGATGCAAGTTCTCCTGTTGGAGGAGCAAGTCCTTAGACGGGCTATCGTGGAGCAGTGTGACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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| CDS-3UTR GCA 90 bp | AGCCATATTCAAAGAGTGCTTCTCTCTTCAGAGCTGAACCTGAACCCCTTACCATTCTCCTGTGTATCCTaGTTCTCCTCGCCGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SHIQRVLLSSELNLNPLPFSCVS*FSSPVS Trigger: GGAGACCGGCGAGGAGAAGCAGGATACACAGGAGAA...TGGTAAGGGGTTCAGGTTCAGCTCTGAAGAGAGAAGCACTCTTTGAATATGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037983.6 ENSMUST00000058230.13 |
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| CDS-3UTR CCA 90 bp | GGAACAGTTTATCCTAAATCCTCAACTTGTTCTGCAGAACCAGAGAGACCTCGTGTCTGCTCCTGCACTTaGCAGCTGCTTGTTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: GTVYPKSSTCSAEPERPRVCSCT*QLLVLH Trigger: ATGAAGAACAAGCAGCTGCCAAGTGCAGGAGCAGAC...ACGAGGTCTCTCTGGTTCTGCAGAACAAGTTGAGGATTTAGGATAAACTGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037983.6 ENSMUST00000058230.13 |
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| 3UTR CAA 72 bp | TTCTCTCTCAAAAAGGCTATGATACCTATGAGACTGTaGTTGGAAGCTATGGCCCTTAAATCTCAAACTCTC | + |
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Preference number: 4 (lower is better) Translates to: FSLKKAMIPMRL*LEAMALKSQTL Trigger: GAGAGTTTGAGATTTAAGGGCCATAGCTTCCAACAACAGTCTCATAGGTATCATAGCCTTTTTGAGAGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037983.6 |
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