Pregenerated sensors for ENPP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037370Ensembl transcript IDs: ENSMUST00000039882.13, ENSMUST00000105520.8, ENSMUST00000135846.2
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGGGGAAAGGGCAAGGAGGACCAAACGTCTGCGGGCAGTCACCTaGCTCACCTCATCACATCTCCTGAACACATGGCTCCCCACAGCC | + |
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Preference number: 1 (lower is better) Translates to: TGERARRTKRLRAVT*LTSSHLLNTWLPTA Trigger: GGCTGTGGGGAGCCATGTGTTCAGGAGATGTGATGAGGTGAGGCAGGTGACTGCCCGCAGACGTTTGGTCCTCCTTGCCCTTTCCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR GCA 90 bp | CAGAGGGGCATGAGGAGGTCCAGGCTGTATCCGGTCAAGAACTGTTaGTGCTGGAGTAGACAGACGCGGTGCTGCTTCAGTAGAATCCGG | + |
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Preference number: 1 (lower is better) Translates to: QRGMRRSRLYPVKNC*CWSRQTRCCFSRIR Trigger: CCGGATTCTACTGAAGCAGCACCGCGTCTGTCTACTCCAGCAGCAACAGTTCTTGACCGGATACAGCCTGGACCTCCTCATGCCCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR TCA 90 bp | GTCTGTGACCCGAGCTCTGTGCAAGGTCAGCAACTCCTCGACCCATaGAGACTCCCGCTTCCCATGCGTACAGCTCTCAATGTTATCAGG | + |
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Preference number: 1 (lower is better) Translates to: VCDPSSVQGQQLLDP*RLPLPMRTALNVIR Trigger: CCTGATAACATTGAGAGCTGTACGCATGGGAAGCGGGAGTCTTCATGGGTCGAGGAGTTGCTGACCTTGCACAGAGCTCGGGTCACAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR TCA 90 bp | CCAAACGTCTGCGGGCAGTCACCTGCCTCACCTCATCACATCTCCTaGACACATGGCTCCCCACAGCCTCCATTTAAACAGTCCTTAAAC | + |
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Preference number: 1 (lower is better) Translates to: PNVCGQSPASPHHIS*THGSPQPPFKQSLN Trigger: GTTTAAGGACTGTTTAAATGGAGGCTGTGGGGAGCCATGTGTTCAGGAGATGTGATGAGGTGAGGCAGGTGACTGCCCGCAGACGTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR CCA 90 bp | GTTCCTCTGGCAGATAAGTATGTGCCCACAGGACAGAAGTTACCCTaGCTAATAACAGGGGAAAGGGCAAGGAGGACCAAACGTCTGCGG | + |
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Preference number: 1 (lower is better) Translates to: VPLADKYVPTGQKLP*LITGERARRTKRLR Trigger: CCGCAGACGTTTGGTCCTCCTTGCCCTTTCCCCTGTTATTAGCCAGGGTAACTTCTGTCCTGTGGGCACATACTTATCTGCCAGAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR CCA 90 bp | GACAGTCACATGCCCTTGTCCCCAAAGAGGACAGAGGCTGCAGGCTaGCACTGTTTGCTCTGCGAACCTGAAGTGAACTTTAATTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: DSHMPLSPKRTEAAG*HCLLCEPEVNFNSF Trigger: AAAGGAATTAAAGTTCACTTCAGGTTCGCAGAGCAAACAGTGCCAGCCTGCAGCCTCTGTCCTCTTTGGGGACAAGGGCATGTGACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR TCA 90 bp | GGAGTCTCAGACAGCTGCTTGCAGCTGGTGAGCACAATGAAGAAGTaGGTCGGAATCAGAATTTCCTGGCTTCGGATGACTCTGCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: GVSDSCLQLVSTMKK*VGIRISWLRMTLLF Trigger: AAACAGCAGAGTCATCCGAAGCCAGGAAATTCTGATTCCGACTCACTTCTTCATTGTGCTCACCAGCTGCAAGCAGCTGTCTGAGACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR GCA 90 bp | CTAGTAAAGAGGACTGGGATGTGCATGTGCATATGTGTGTGCATGTaGATATTCAAGAGCATGCACGTGTGTGGGTGTGTTACATGTGTA | + |
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Preference number: 1 (lower is better) Translates to: LVKRTGMCMCICVCM*IFKSMHVCGCVTCV Trigger: TACACATGTAACACACCCACACACGTGCATGCTCTTGAATATGCACATGCACACACATATGCACATGCACATCCCAGTCCTCTTTACTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR TCA 90 bp | TTCTACACGAAGGGTAATCAGCTTAATTGTTTCAAAGTTCAAGTGTaGGTTCCTCTGGCAGATAAGTATGTGCCCACAGGACAGAAGTTA | + |
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Preference number: 1 (lower is better) Translates to: FYTKGNQLNCFKVQV*VPLADKYVPTGQKL Trigger: TAACTTCTGTCCTGTGGGCACATACTTATCTGCCAGAGGAACTCACACTTGAACTTTGAAACAATTAAGCTGATTACCCTTCGTGTAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR-3UTR TCA 90 bp | CACGTACACTGCCCCTCGTCCCTTAAGAACACTTCCAGGTGTGAGGTGAAGTGTACGCCCAGAGGGGCATaGGGAGGTCCAGGCTGTATC | + |
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Preference number: 2 (lower is better) Translates to: HVHCPSSLKNTSRCEVKCTPRGA*GGPGCI Trigger: GATACAGCCTGGACCTCCTCATGCCCCTCTGGGCGT...ACACTTCACCTCACACCTGGAAGTGTTCTTAAGGGACGAGGGGCAGTGTACGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGGACATCGACACCACACAGGGAGTCCCAGTTGTAACTCCACTCGACCGTCAGTGGCAATGTCGGTaGGGGGAAGTTACATCACTG | + |
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Preference number: 2 (lower is better) Translates to: ARDIDTTQGVPVVTPLDRQWQCR*GEVTSL Trigger: CAGTGATGTAACTTCCCCTCACCGACATTGCCACTG...ACGGTCGAGTGGAGTTACAACTGGGACTCCCTGTGTGGTGTCGATGTCCCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGGAGGACCAAACGTCTGCGGGCAGTCACCTGCCTCACCTCATCACATCTCCAAGAGGACTGGGATGTaGATGTGCATATGTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: QGGPNVCGQSPASPHHISKRTGM*MCICVC Trigger: GCACACACATATGCACATGCACATCCCAGTCCTCTT...GGAGATGTGATGAGGTGAGGCAGGTGACTGCCCGCAGACGTTTGGTCCTCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCTGGTAGAAGCTGAGGCCAGTGATGAGTTCCACGTCTGTGACCCGAGCTCTTTCCATGCCGTGATCTaGAATGAGGATGAGGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: VLVEAEASDEFHVCDPSSFHAVI*NEDEVQ Trigger: CTGAACCTCATCCTCATTTCAGATCACGGCATGGAA...AGAGCTCGGGTCACAGACGTGGAACTCATCACTGGCCTCAGCTTCTACCAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR GCA 90 bp | GTACACTGCCCCTCGTCCCTTAAGAACACTTCCAGGTGTGAGGTGAAGTGTCTTGGAGTCTCAGACAGCTaGTTGCAGCTGGTGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: VHCPSSLKNTSRCEVKCLGVSDS*LQLVST Trigger: TGTGCTCACCAGCTGCAAGCAGCTGTCTGAGACTCC...AAGACACTTCACCTCACACCTGGAAGTGTTCTTAAGGGACGAGGGGCAGTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR GCA 90 bp | GCCAGGGACATCGACACCACACAGGGAGTCCCAGTTGTAACTCCACTCGACCGTGCATATTCAAGAGCATaGACGTGTGTGGGTGTGTTA | + |
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Preference number: 2 (lower is better) Translates to: ARDIDTTQGVPVVTPLDRAYSRA*TCVGVL Trigger: TAACACACCCACACACGTGCATGCTCTTGAATATGC...ACGGTCGAGTGGAGTTACAACTGGGACTCCCTGTGTGGTGTCGATGTCCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR-3UTR CCA 90 bp | CACGTACACTGCCCCTCGTCCCTTAAGAACACTTCCAGGTGTGAGGTGAAGTGTTCTCTGGAACATCAGTaGGTCTCAACCGAGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: HVHCPSSLKNTSRCEVKCSLEHQ*VSTEQQ Trigger: CTGCTGCTCGGTTGAGACCCACTGATGTTCCAGAGA...ACACTTCACCTCACACCTGGAAGTGTTCTTAAGGGACGAGGGGCAGTGTACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGGACATCGACACCACACAGGGAGTCCCAGTTGTAACTCCACTCGACCGTGGAATCCGAAGATCCTaGTACAGACAGTTGGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: ARDIDTTQGVPVVTPLDRGIRRS*YRQLEK Trigger: CTTTTCCAACTGTCTGTACCAGGATCTTCGGATTCC...ACGGTCGAGTGGAGTTACAACTGGGACTCCCTGTGTGGTGTCGATGTCCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR CAA 90 bp | ATGCCCTTGTCCCCAAAGAGGACAGAGGCTGCAGGCTGGCACTGTTaGCTCTGCGAACCTGAAGTGAACTTTAATTCCTTTTCTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: MPLSPKRTEAAGWHC*LCEPEVNFNSFSPS Trigger: GGAGGGAGAAAAGGAATTAAAGTTCACTTCAGGTTCGCAGAGCAAACAGTGCCAGCCTGCAGCCTCTGTCCTCTTTGGGGACAAGGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR-3UTR TCA 90 bp | GTACACTGCCCCTCGTCCCTTAAGAACACTTCCAGGTGTGAGGTGAAGTGTCTTCTTCAGCACCATGCTTaGAGGCAGGTCCATAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: VHCPSSLKNTSRCEVKCLLQHHA*RQVHSQ Trigger: TTGGCTATGGACCTGCCTTCAAGCATGGTGCTGAAG...AAGACACTTCACCTCACACCTGGAAGTGTTCTTAAGGGACGAGGGGCAGTGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR TCA 90 bp | GTCCTGGTAGAAGCTGAGGCCAGTGATGAGTTCCACGTCTGTGACCCGAGCTCTGTTTCTCAAAGTCCTTaGTTGGCACAATCCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: VLVEAEASDEFHVCDPSSVSQSP*LAQSKG Trigger: ACCCTTGGATTGTGCCAATCAAGGACTTTGAGAAAC...AGAGCTCGGGTCACAGACGTGGAACTCATCACTGGCCTCAGCTTCTACCAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR GCA 90 bp | ACCCTGGCTAATAACAGGGGAAAGGGCAAGGAGGACCAAACGTCTGCGGGCAGTTTCAGTGACATTTCCTaGTCCTTAGGAACCCACTCA | + |
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Preference number: 2 (lower is better) Translates to: TLANNRGKGKEDQTSAGSFSDIS*SLGTHS Trigger: TGAGTGGGTTCCTAAGGAGCAGGAAATGTCACTGAA...ACTGCCCGCAGACGTTTGGTCCTCCTTGCCCTTTCCCCTGTTATTAGCCAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCTGGTAGAAGCTGAGGCCAGTGATGAGTTCCACGTCTGTGACCCGAGCTCTAAGAGCTTGCATGTTTaGAAACAAGTTGTCAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: VLVEAEASDEFHVCDPSSKSLHV*KQVVRA Trigger: GGCTCTGACAACTTGTTTTCAAACATGCAAGCTCTT...AGAGCTCGGGTCACAGACGTGGAACTCATCACTGGCCTCAGCTTCTACCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR TCA 90 bp | TCATGGTTCAGTGACATTTCCTGCTCCTTAGGAACCCACTCACACTTCTGCCACCTTCCAGGTGTGAGGTaGAGTGTCTTTACTCCCCGT | + |
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Preference number: 2 (lower is better) Translates to: SWFSDISCSLGTHSHFCHLPGVR*SVFTPR Trigger: ACGGGGAGTAAAGACACTTCACCTCACACCTGGAAG...GTGGCAGAAGTGTGAGTGGGTTCCTAAGGAGCAGGAAATGTCACTGAACCATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGCACTCCAAGGGAGTCTCAGACAGCTGCTTGCAGCTGGTGAGCACAATGAACATACTTCTTACAGCTaGCTTGTTCCATGCCGTGAT | + |
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Preference number: 2 (lower is better) Translates to: GALQGSLRQLLAAGEHNEHTSYS*LVPCRD Trigger: ATCACGGCATGGAACAAGGCAGCTGTAAGAAGTATG...TTCATTGTGCTCACCAGCTGCAAGCAGCTGTCTGAGACTCCCTTGGAGTGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR GCA 90 bp | GTACACTGCCCCTCGTCCCTTAAGAACACTTCCAGGTGTGAGGTGAAGTGTCTTAGGACAGGAACACTCTaGAGATGTGCTGAGTCGTCA | + |
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Preference number: 2 (lower is better) Translates to: VHCPSSLKNTSRCEVKCLRTGTL*RCAESS Trigger: TGACGACTCAGCACATCTGCAGAGTGTTCCTGTCCT...AAGACACTTCACCTCACACCTGGAAGTGTTCTTAAGGGACGAGGGGCAGTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
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| 3UTR-3UTR GCA 90 bp | GTACACTGCCCCTCGTCCCTTAAGAACACTTCCAGGTGTGAGGTGAAGTGTCTTCTTAGACAGGAAGTCTaGATGGCACAGGACAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: VHCPSSLKNTSRCEVKCLLRQEV*MAQDRN Trigger: GTTCCTGTCCTGTGCCATGCAGACTTCCTGTCTAAG...AAGACACTTCACCTCACACCTGGAAGTGTTCTTAAGGGACGAGGGGCAGTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
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| 3UTR CAA 90 bp | CCGAAGATCCTGGTACAGACAGTTGGAAAAGTCATCTCTGGAGAATaGGTCATTACTGAGGAAGGTGTAAGACGCCCAGAGGGGCATGAG | + |
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Preference number: 2 (lower is better) Translates to: PKILVQTVGKVISGE*VITEEGVRRPEGHE Trigger: CTCATGCCCCTCTGGGCGTCTTACACCTTCCTCAGTAATGACCAATTCTCCAGAGATGACTTTTCCAACTGTCTGTACCAGGATCTTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCCTCACCTCATCACATCTCCTGAACACATGGCTCCCCACAGCCTCCATTTTGGAAAGAACAGACTaGAAGATATGCATGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: TCLTSSHLLNTWLPTASILERTD*KICMPE Trigger: CTCTGGCATGCATATCTTTCAGTCTGTTCTTTCCAA...AATGGAGGCTGTGGGGAGCCATGTGTTCAGGAGATGTGATGAGGTGAGGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR-3UTR CCA 90 bp | GTACACTGCCCCTCGTCCCTTAAGAACACTTCCAGGTGTGAGGTGAAGTGTCTTCGAAGTGTAAGCGCTTaGGTAAGAAGGGTTTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: VHCPSSLKNTSRCEVKCLRSVSA*VRRVSG Trigger: ACCTGAAACCCTTCTTACCCAAGCGCTTACACTTCG...AAGACACTTCACCTCACACCTGGAAGTGTTCTTAAGGGACGAGGGGCAGTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR TCA 90 bp | GTGTTTTCAACCTCAGCAGTTCTGAAACTGACTCTTGTCGGTCCTGGTAGAAGCCCTTGTTCCATGCCGTaGTCTGAAATGAGGATGAGG | + |
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Preference number: 2 (lower is better) Translates to: VFSTSAVLKLTLVGPGRSPCSMP*SEMRMR Trigger: CCTCATCCTCATTTCAGATCACGGCATGGAACAAGG...GCTTCTACCAGGACCGACAAGAGTCAGTTTCAGAACTGCTGAGGTTGAAAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR GCA 90 bp | ACCTGCCTCACCTCATCACATCTCCTGAACACATGGCTCCCCACAGCCTCCATTACCGTTTCCAAACAATaGAAAAGTGTAGAGGACTGT | + |
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Preference number: 2 (lower is better) Translates to: TCLTSSHLLNTWLPTASITVSKQ*KSVEDC Trigger: ACAGTCCTCTACACTTTTGCATTGTTTGGAAACGGT...AATGGAGGCTGTGGGGAGCCATGTGTTCAGGAGATGTGATGAGGTGAGGCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR-3UTR CCA 90 bp | GCACTCCAAGGGAGTCTCAGACAGCTGCTTGCAGCTGGTGAGCACAATGAAGAATCATCTCTGGAGAATTaGTCATTACTGAGGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ALQGSLRQLLAAGEHNEESSLEN*SLLRKV Trigger: CACCTTCCTCAGTAATGACCAATTCTCCAGAGATGA...TTCTTCATTGTGCTCACCAGCTGCAAGCAGCTGTCTGAGACTCCCTTGGAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR CCA 90 bp | TCATGGTTCAGTGACATTTCCTGCTCCTTAGGAACCCACTCACACTTCTGCCACGCATGCCAGAGGCTATaGGTAACACAAAACAACACC | + |
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Preference number: 2 (lower is better) Translates to: SWFSDISCSLGTHSHFCHACQRL*VTQNNT Trigger: GGTGTTGTTTTGTGTTACCCATAGCCTCTGGCATGC...GTGGCAGAAGTGTGAGTGGGTTCCTAAGGAGCAGGAAATGTCACTGAACCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGCAGCTGGTGAGCACAATGAAGAAGTGAGTCGGAATCAGAATTTCCTGGCTTGGTTAAGGCTGCCATaGCTTCCATTATTGGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: LAAGEHNEEVSRNQNFLAWLRLP*LPLLGA Trigger: AGCTCCCAATAATGGAAGTCATGGCAGCCTTAACCA...AGCCAGGAAATTCTGATTCCGACTCACTTCTTCATTGTGCTCACCAGCTGCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR TCA 90 bp | GTACACTGCCCCTCGTCCCTTAAGAACACTTCCAGGTGTGAGGTGAAGTGTCTTTACACAGCTTCAAACTaGAGAACTAAGCCAGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: VHCPSSLKNTSRCEVKCLYTASN*RTKPGK Trigger: TTTGCCTGGCTTAGTTCTTCAGTTTGAAGCTGTGTA...AAGACACTTCACCTCACACCTGGAAGTGTTCTTAAGGGACGAGGGGCAGTGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR-3UTR GCA 90 bp | CACGTACACTGCCCCTCGTCCCTTAAGAACACTTCCAGGTGTGAGGTGAAGTGTGTGTCATTTGTCGTGTaGACAGTGAAGATGTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: HVHCPSSLKNTSRCEVKCVSFVV*TVKMLS Trigger: ACTTAACATCTTCACTGTGCACACGACAAATGACAC...ACACTTCACCTCACACCTGGAAGTGTTCTTAAGGGACGAGGGGCAGTGTACGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR-3UTR CCA 90 bp | CCGCTTCCCATGCGTACAGCTCTCAATGTTATCAGGCCTATGAGGCAGTATGTACTCAAAGTCCTTGATTaGCACAATCCAAGGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: PLPMRTALNVIRPMRQYVLKVLD*HNPRVT Trigger: TGTGACCCTTGGATTGTGCCAATCAAGGACTTTGAG...TACATACTGCCTCATAGGCCTGATAACATTGAGAGCTGTACGCATGGGAAGCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTTCAACCTCAGCAGTTCTGAAACTGACTCTTGTCGGTCCTGGTAGAAGCGGAATCAGAATTTCCTaGCTTCGGATGACTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VFSTSAVLKLTLVGPGRSGIRIS*LRMTLL Trigger: CAGCAGAGTCATCCGAAGCCAGGAAATTCTGATTCC...GCTTCTACCAGGACCGACAAGAGTCAGTTTCAGAACTGCTGAGGTTGAAAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR CCA 90 bp | GAATGCGTTTACATCACTCTCTTCCTGCTACAAGCTTCTACACGAAGGGTAATCGACAGGAAGTCTGCATaGCACAGGACAGGAACACTC | + |
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Preference number: 2 (lower is better) Translates to: ECVYITLFLLQASTRRVIDRKSA*HRTGTL Trigger: GAGTGTTCCTGTCCTGTGCCATGCAGACTTCCTGTC...GATTACCCTTCGTGTAGAAGCTTGTAGCAGGAAGAGAGTGATGTAAACGCATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR CAA 90 bp | TTATGCACAGGACTAAGGGGAATCCGAAGATCCTGGTACAGACAGTaGGAAAAGTCATCTCTGGAGAATTGGTCATTACTGAGGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LCTGLRGIRRSWYRQ*EKSSLENWSLLRKV Trigger: CACCTTCCTCAGTAATGACCAATTCTCCAGAGATGACTTTTCCAACTGTCTGTACCAGGATCTTCGGATTCCCCTTAGTCCTGTGCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR CCA 90 bp | CCGCTTCCCATGCGTACAGCTCTCAATGTTATCAGGCCTATGAGGCAGTATGTAGACTTGGGTTGTAAATaGGTTTCTTTAGAAGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: PLPMRTALNVIRPMRQYVDLGCK*VSLEGG Trigger: ACCACCTTCTAAAGAAACCCATTTACAACCCAAGTC...TACATACTGCCTCATAGGCCTGATAACATTGAGAGCTGTACGCATGGGAAGCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR CAA 90 bp | TCAGTGGGTCTCAACCGAGCAGCAGGTCCATACACAACTTTCACATaGTTCACATCCCCCAAGTACTTATTCAGGTACACATACTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: SVGLNRAAGPYTTFT*FTSPKYLFRYTYFL Trigger: TAAGAAGTATGTGTACCTGAATAAGTACTTGGGGGATGTGAACAATGTGAAAGTTGTGTATGGACCTGCTGCTCGGTTGAGACCCACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAGTTACCCTGGCTAATAACAGGGGAAAGGGCAAGGAGGACCAAACGTCTATGTTAAGTGATGAGTaGCGAATTCTCTTCAGATCT | + |
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Preference number: 2 (lower is better) Translates to: TEVTLANNRGKGKEDQTSMLSDE*RILFRS Trigger: AGATCTGAAGAGAATTCGTCACTCATCACTTAACAT...AGACGTTTGGTCCTCCTTGCCCTTTCCCCTGTTATTAGCCAGGGTAACTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR-3UTR CCA 90 bp | TCATGGTTCAGTGACATTTCCTGCTCCTTAGGAACCCACTCACACTTCTGCCACAAAAGCACAAGACTTTaGTTATTGGAGGAGACAGAA | + |
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Preference number: 2 (lower is better) Translates to: SWFSDISCSLGTHSHFCHKSTRL*LLEETE Trigger: TTCTGTCTCCTCCAATAACCAAAGTCTTGTGCTTTT...GTGGCAGAAGTGTGAGTGGGTTCCTAAGGAGCAGGAAATGTCACTGAACCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTTCCTAGAACCATTACTTACAGAGGAAGGAATACAGTCAAACACTTCACACATCTCCTGAACACATaGCTCCCCACAGCCTCCATT | + |
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Preference number: 2 (lower is better) Translates to: HFPRTITYRGRNTVKHFTHLLNT*LPTASI Trigger: AATGGAGGCTGTGGGGAGCCATGTGTTCAGGAGATG...TGTGAAGTGTTTGACTGTATTCCTTCCTCTGTAAGTAATGGTTCTAGGAAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR CAA 90 bp | CTACAGACTCTGAGCCTTCACCTTCTTCCCACTGTGGTCCTGTTCTaGAAAACATTGTTTAAAAACTCCTGCTTGGTTCTTTCTCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LQTLSLHLLPTVVLF*KTLFKNSCLVLSQQ Trigger: TTGCTGAGAAAGAACCAAGCAGGAGTTTTTAAACAATGTTTTCAAGAACAGGACCACAGTGGGAAGAAGGTGAAGGCTCAGAGTCTGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCGTTTCCAAACAATGCAAAAGTGTAGAGGACTGTATCAAATATAAGACTCTTCCGGTCAAGAACTGTTaGTGCTGGAGTAGACAGACG | + |
|
Preference number: 2 (lower is better) Translates to: TVSKQCKSVEDCIKYKTLPVKNC*CWSRQT Trigger: CGTCTGTCTACTCCAGCAGCAACAGTTCTTGACCGG...AAGAGTCTTATATTTGATACAGTCCTCTACACTTTTGCATTGTTTGGAAACGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| 3UTR-3UTR TCA 90 bp | TTACTCAGTTTTATTAACAACAATAGGATTCCAACATCAGGTCCCCAGACCACGACAATATTTCCTCTCTaGTGGATTCAACGCAAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LLSFINNNRIPTSGPQTTTIFPL*WIQRKL Trigger: CAACTTGCGTTGAATCCATCAGAGAGGAAATATTGT...CGTGGTCTGGGGACCTGATGTTGGAATCCTATTGTTGTTAATAAAACTGAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| 3UTR-3UTR TCA 90 bp | TCATCTTCTGTGGTCAGATTAAGCTGTTTCTCAAAGTCCTTGATTGGCACAATCAAGTTGTCAGAGCCATaGAATCCACTTCCACAATAT | + |
|
Preference number: 2 (lower is better) Translates to: SSSVVRLSCFSKSLIGTIKLSEP*NPLPQY Trigger: ATATTGTGGAAGTGGATTTCATGGCTCTGACAACTT...GATTGTGCCAATCAAGGACTTTGAGAAACAGCTTAATCTGACCACAGAAGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| 3UTR CAA 90 bp | GCCTTGCTTTGTCAATTTCTGTGTCATTCAGGCCGATTCTGCCATTaGTACGGAACTAAGACATCACATTTCATGATATTTCATGTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: ALLCQFLCHSGRFCH*YGTKTSHFMIFHVF Trigger: AAACACATGAAATATCATGAAATGTGATGTCTTAGTTCCGTACAAATGGCAGAATCGGCCTGAATGACACAGAAATTGACAAAGCAAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR-3UTR CCA 90 bp | CACTTTCCTAGAACCATTACTTACAGAGGAAGGAATACAGTCAAACACTTCACACTGGGAACAACAGAATaGATAAAAGGTAGCATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HFPRTITYRGRNTVKHFTLGTTE*IKGSIK Trigger: TTTTATGCTACCTTTTATCCATTCTGTTGTTCCCAG...TGTGAAGTGTTTGACTGTATTCCTTCCTCTGTAAGTAATGGTTCTAGGAAAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR GCA 72 bp | GCCATACCCAGCTCTCCAGCTCCGCTGCCAGGGCAGTaGCAGTGGAGGCTGAGTAGCCTGAGAGGGTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: AIPSSPAPLPGQ*QWRLSSLRGSS Trigger: AGATGACCCTCTCAGGCTACTCAGCCTCCACTGGCACTGCCCTGGCAGCGGAGCTGGAGAGCTGGGTATGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR CCA 72 bp | TGCCTGCATCACTGGAGACCCGCCAGGAGCAGTAAGTaGTACTGTTCACATCCCAGCACGGGAGGCATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CLHHWRPARSSK*YCSHPSTGGIS Trigger: GCTGATGCCTCCCGTGCTGGGATGTGAACAGTACCACTTACTGCTCCTGGCGGGTCTCCAGTGATGCAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR GCA 72 bp | AGGGCAAGGAGGACCAAACGTCTGCGGGCAGTCACCTaGCTCACCTCATCACATCTCCTGAACACATGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RARRTKRLRAVT*LTSSHLLNTWL Trigger: GAGCCATGTGTTCAGGAGATGTGATGAGGTGAGGCAGGTGACTGCCCGCAGACGTTTGGTCCTCCTTGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR TCA 72 bp | CCGAGCTCTGTGCAAGGTCAGCAACTCCTCGACCCATaGAGACTCCCGCTTCCCATGCGTACAGCTCTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: PSSVQGQQLLDP*RLPLPMRTALN Trigger: ATTGAGAGCTGTACGCATGGGAAGCGGGAGTCTTCATGGGTCGAGGAGTTGCTGACCTTGCACAGAGCTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| 3UTR TCA 72 bp | TGCATGGCACAGGACAGGAACACTCTGCAGATGTGCTaGGTCGTCACACAACCCAGCCAGGGACATCGACAC | + |
|
Preference number: 3 (lower is better) Translates to: CMAQDRNTLQMC*VVTQPSQGHRH Trigger: GTGTCGATGTCCCTGGCTGGGTTGTGTGACGACTCAGCACATCTGCAGAGTGTTCCTGTCCTGTGCCATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
||
| 3UTR GCA 72 bp | GACAGGAAGTCTGCATGGCACAGGACAGGAACACTCTaGAGATGTGCTGAGTCGTCACACAACCCAGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DRKSAWHRTGTL*RCAESSHNPAR Trigger: CCTGGCTGGGTTGTGTGACGACTCAGCACATCTGCAGAGTGTTCCTGTCCTGTGCCATGCAGACTTCCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
||
| 3UTR GCA 72 bp | ATGAGGAGGTCCAGGCTGTATCCGGTCAAGAACTGTTaGTGCTGGAGTAGACAGACGCGGTGCTGCTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: MRRSRLYPVKNC*CWSRQTRCCFS Trigger: ACTGAAGCAGCACCGCGTCTGTCTACTCCAGCAGCAACAGTTCTTGACCGGATACAGCCTGGACCTCCTCAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGACATCGACACCACACAGGGAGTCCCAGTTGTAACTCCACTCGACCGTTTTGGATTCAACGCAAGTaGCCACTGAGGGTCCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: QGHRHHTGSPSCNSTRPFWIQRK*PLRVQV Trigger: TACCTGGACCCTCAGTGGCAACTTGCGTTGAATCCA...AAACGGTCGAGTGGAGTTACAACTGGGACTCCCTGTGTGGTGTCGATGTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| 3UTR GCA 72 bp | CATCTCTATCCAGTGGTGATGAAGCTTTCTCCAGGATaGCTGCATCACTGGAGACCCGCCAGGAGCAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: HLYPVVMKLSPG*LHHWRPARSSK Trigger: CTTACTGCTCCTGGCGGGTCTCCAGTGATGCAGGCATCCTGGAGAAAGCTTCATCACCACTGGATAGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR TCA 72 bp | CCAAGGGTCACATGTGCAGCCGAGGTCATTGGATGTTaGTTTGATTGGACACTGAGACAGGAAGCCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PRVTCAAEVIGC*FDWTLRQEALF Trigger: GAAGAGGGCTTCCTGTCTCAGTGTCCAATCAAATCAACATCCAATGACCTCGGCTGCACATGTGACCCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| 3UTR GCA 72 bp | TGCTCCTTAGGAACCCACTCACACTTCTGCCACCGCTaGCTGTTTCCTCGGGATTATAGGAATTGTAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: CSLGTHSHFCHR*LFPRDYRNCNQ Trigger: CTGGTTACAATTCCTATAATCCCGAGGAAACAGGCAGCGGTGGCAGAAGTGTGAGTGGGTTCCTAAGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR TCA 72 bp | GGTCACATGTGCAGCCGAGGTCATTGGATGTTGATTTaGTTGGACACTGAGACAGGAAGCCCTCTTCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GHMCSRGHWMLI*LDTETGSPLLW Trigger: CCAAAGAAGAGGGCTTCCTGTCTCAGTGTCCAATCAAATCAACATCCAATGACCTCGGCTGCACATGTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| 3UTR TCA 72 bp | GACAGCTGCTTGCAGCTGGTGAGCACAATGAAGAAGTaGGTCGGAATCAGAATTTCCTGGCTTCGGATGACT | + |
|
Preference number: 3 (lower is better) Translates to: DSCLQLVSTMKK*VGIRISWLRMT Trigger: AGTCATCCGAAGCCAGGAAATTCTGATTCCGACTCACTTCTTCATTGTGCTCACCAGCTGCAAGCAGCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| 3UTR TCA 72 bp | AAGAAGGAGGCCGAGTCCCCAGTATTTCTGCAGGGATaGTGTCAGAGGAGATTTACCGAAGATGCAGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: KKEAESPVFLQG*CQRRFTEDAEC Trigger: GCATTCTGCATCTTCGGTAAATCTCCTCTGACATCATCCCTGCAGAAATACTGGGGACTCGGCCTCCTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR GCA 72 bp | CAGAGAGTAAGAAGGAGGCCGAGTCCCCAGTATTTCTaGAGGGATGATGTCAGAGGAGATTTACCGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: QRVRRRPSPQYF*RDDVRGDLPKM Trigger: CATCTTCGGTAAATCTCCTCTGACATCATCCCTGCAGAAATACTGGGGACTCGGCCTCCTTCTTACTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR CCA 72 bp | GCAGATAAGTATGTGCCCACAGGACAGAAGTTACCCTaGCTAATAACAGGGGAAAGGGCAAGGAGGACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: ADKYVPTGQKLP*LITGERARRTK Trigger: TTTGGTCCTCCTTGCCCTTTCCCCTGTTATTAGCCAGGGTAACTTCTGTCCTGTGGGCACATACTTATCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACTCCAAGGGAGTCTCAGACAGCTGCTTGCAGCTGGTGAGCACAATGAAGAATACACAACTTTCACATaGTTCACATCCCCCAAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: ALQGSLRQLLAAGEHNEEYTTFT*FTSPKY Trigger: GTACTTGGGGGATGTGAACAATGTGAAAGTTGTGTA...TTCTTCATTGTGCTCACCAGCTGCAAGCAGCTGTCTGAGACTCCCTTGGAGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| 3UTR GCA 72 bp | TACCCAGTATATCTTTCATGGTTCAGTGACATTTCCTaGTCCTTAGGAACCCACTCACACTTCTGCCACCGC | + |
|
Preference number: 3 (lower is better) Translates to: YPVYLSWFSDIS*SLGTHSHFCHR Trigger: GCGGTGGCAGAAGTGTGAGTGGGTTCCTAAGGAGCAGGAAATGTCACTGAACCATGAAAGATATACTGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR TCA 72 bp | GACTGGCAGGAAGTAGCAAACTTGGAAAGAACAGACTaGAAGATATGCATGCCAGAGGCTATGGGTAACACA | + |
|
Preference number: 3 (lower is better) Translates to: DWQEVANLERTD*KICMPEAMGNT Trigger: TGTGTTACCCATAGCCTCTGGCATGCATATCTTTCAGTCTGTTCTTTCCAAGTTTGCTACTTCCTGCCAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR CCA 72 bp | CATTTATGCACAGGACTAAGGGGAATCCGAAGATCCTaGTACAGACAGTTGGAAAAGTCATCTCTGGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HLCTGLRGIRRS*YRQLEKSSLEN Trigger: ATTCTCCAGAGATGACTTTTCCAACTGTCTGTACCAGGATCTTCGGATTCCCCTTAGTCCTGTGCATAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| 3UTR TCA 72 bp | AGAAGTGAGTCGGAATCAGAATTTCCTGGCTTCGGATaGCTCTGCTGTTTTGTTTCAGGATCTCTAAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RSESESEFPGFG*LCCFVSGSLRN Trigger: ATTCCTTAGAGATCCTGAAACAAAACAGCAGAGTCATCCGAAGCCAGGAAATTCTGATTCCGACTCACTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| 3UTR TCA 72 bp | AAGGGTAATCAGCTTAATTGTTTCAAAGTTCAAGTGTaGGTTCCTCTGGCAGATAAGTATGTGCCCACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KGNQLNCFKVQV*VPLADKYVPTG Trigger: TCCTGTGGGCACATACTTATCTGCCAGAGGAACTCACACTTGAACTTTGAAACAATTAAGCTGATTACCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR CCA 72 bp | AGCTTAATTGTTTCAAAGTTCAAGTGTGAGTTCCTCTaGCAGATAAGTATGTGCCCACAGGACAGAAGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SLIVSKFKCEFL*QISMCPQDRSY Trigger: GTAACTTCTGTCCTGTGGGCACATACTTATCTGCCAGAGGAACTCACACTTGAACTTTGAAACAATTAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR TCA 72 bp | TTTGTCGTGTGCACAGTGAAGATGTTAAGTGATGAGTaGCGAATTCTCTTCAGATCTACACAGCTTCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: FVVCTVKMLSDE*RILFRSTQLQT Trigger: AGTTTGAAGCTGTGTAGATCTGAAGAGAATTCGTCACTCATCACTTAACATCTTCACTGTGCACACGACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR GCA 72 bp | TTGCTTTGTCAATTTCTGTGTCATTCAGGCCGATTCTaGCATTTGTACGGAACTAAGACATCACATTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: LLCQFLCHSGRF*HLYGTKTSHFM Trigger: CATGAAATGTGATGTCTTAGTTCCGTACAAATGGCAGAATCGGCCTGAATGACACAGAAATTGACAAAGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACTCAGTTTTATTAACAACAATAGGATTCCAACATCAGGTCCCCAGACCACGGTAGTGCCATATAACTaGAAAACTCTGATACATTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLSFINNNRIPTSGPQTTVVPYN*KTLIHW Trigger: CCAATGTATCAGAGTTTTCAAGTTATATGGCACTAC...CGTGGTCTGGGGACCTGATGTTGGAATCCTATTGTTGTTAATAAAACTGAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| CDS-3UTR CCA 90 bp | AAAGCCATACCCAGCTCTCCAGCTCCGCTGCCAGGGCAGTGCCAGTGGAGGCTGAGGTGTTGGGGTCTTTaGCAGGGCGGGCACGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KAIPSSPAPLPGQCQWRLRCWGL*QGGHAP Trigger: CGGAGCGTGCCCGCCCTGCCAAAGACCCCAACACCT...CAGCCTCCACTGGCACTGCCCTGGCAGCGGAGCTGGAGAGCTGGGTATGGCTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCATACCCAGCTCTCCAGCTCCGCTGCCAGGGCAGTGCCAGTGGAGGCTGACGCCCAGAGGGGCATaGGGAGGTCCAGGCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: KAIPSSPAPLPGQCQWRLTPRGA*GGPGCI Trigger: GATACAGCCTGGACCTCCTCATGCCCCTCTGGGCGT...CAGCCTCCACTGGCACTGCCCTGGCAGCGGAGCTGGAGAGCTGGGTATGGCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCATACCCAGCTCTCCAGCTCCGCTGCCAGGGCAGTGCCAGTGGAGGCTGTCTCTGGAACATCAGTaGGTCTCAACCGAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KAIPSSPAPLPGQCQWRLSLEHQ*VSTEQQ Trigger: CTGCTGCTCGGTTGAGACCCACTGATGTTCCAGAGA...CAGCCTCCACTGGCACTGCCCTGGCAGCGGAGCTGGAGAGCTGGGTATGGCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCATACCCAGCTCTCCAGCTCCGCTGCCAGGGCAGTGCCAGTGGAGGCTGAAGTGTGGTCTTTCATaGCTAGGAAGCTGCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KAIPSSPAPLPGQCQWRLKCGLS*LGSCSH Trigger: GTGGCTGCAGCTTCCTAGCCATGAAAGACCACACTT...CAGCCTCCACTGGCACTGCCCTGGCAGCGGAGCTGGAGAGCTGGGTATGGCTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCATACCCAGCTCTCCAGCTCCGCTGCCAGGGCAGTGCCAGTGGAGGCTGGATTTGATTGGACACTaGGACAGGAAGCCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAIPSSPAPLPGQCQWRLDLIGH*DRKPSS Trigger: AGAAGAGGGCTTCCTGTCTCAGTGTCCAATCAAATC...CAGCCTCCACTGGCACTGCCCTGGCAGCGGAGCTGGAGAGCTGGGTATGGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR CCA 90 bp | GTACACTGCCCCTCGTCCCTTAAGAACACTTCCAGGTGTGAGGTGAAGTGTCTTAGGTGTTGGGGTCTTTaGCAGGGCGGGCACGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VHCPSSLKNTSRCEVKCLRCWGL*QGGHAP Trigger: CGGAGCGTGCCCGCCCTGCCAAAGACCCCAACACCT...AAGACACTTCACCTCACACCTGGAAGTGTTCTTAAGGGACGAGGGGCAGTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
||
| CDS-3UTR CCA 90 bp | GACGCCCAGAGGGGCATGAGGAGGTCCAGGCTGTATCCGGTCAAGAACTGTTGCTCCACACAGGTCTCCTaGAAATCCAGACAGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DAQRGMRRSRLYPVKNCCSTQVS*KSRQQF Trigger: GAACTGCTGTCTGGATTTCCAGGAGACCTGTGTGGA...GCAACAGTTCTTGACCGGATACAGCCTGGACCTCCTCATGCCCCTCTGGGCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| CDS-3UTR CCA 90 bp | GACGCCCAGAGGGGCATGAGGAGGTCCAGGCTGTATCCGGTCAAGAACTGTTGCCTGGTTCTTCTTTCATaGCTAGGAAGCTGCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DAQRGMRRSRLYPVKNCCLVLLS*LGSCSH Trigger: GTGGCTGCAGCTTCCTAGCCATGAAAGAAGAACCAG...GCAACAGTTCTTGACCGGATACAGCCTGGACCTCCTCATGCCCCTCTGGGCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| CDS-3UTR CCA 90 bp | AAAGCCATACCCAGCTCTCCAGCTCCGCTGCCAGGGCAGTGCCAGTGGAGGCTGCCTGGTACAGACAGTTaGAAAAGTCATCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAIPSSPAPLPGQCQWRLPGTDS*KSHLWR Trigger: TCTCCAGAGATGACTTTTCCAACTGTCTGTACCAGG...CAGCCTCCACTGGCACTGCCCTGGCAGCGGAGCTGGAGAGCTGGGTATGGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR CCA 90 bp | GAAATGAGGATGAGGTTCAGGCATTTATCCAAGCCCAGGTCCTTCAGGCCGTCCGCACTTTGTAGGTGTTaGGGTCTTTGGCAGGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EMRMRFRHLSKPRSFRPSALCRC*GLWQGG Trigger: CCCGCCCTGCCAAAGACCCCAACACCTACAAAGTGC...GGACGGCCTGAAGGACCTGGGCTTGGATAAATGCCTGAACCTCATCCTCATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| CDS-3UTR CCA 90 bp | AAAGCCATACCCAGCTCTCCAGCTCCGCTGCCAGGGCAGTGCCAGTGGAGGCTGCAGAGTGTAAAAGTGTaGTCTTTCATGGCTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KAIPSSPAPLPGQCQWRLQSVKV*SFMARK Trigger: CTTCCTAGCCATGAAAGACCACACTTTTACACTCTG...CAGCCTCCACTGGCACTGCCCTGGCAGCGGAGCTGGAGAGCTGGGTATGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR GCA 90 bp | CACGTACACTGCCCCTCGTCCCTTAAGAACACTTCCAGGTGTGAGGTGAAGTGTGGAGTCTCAGACAGCTaGTTGCAGCTGGTGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HVHCPSSLKNTSRCEVKCGVSDS*LQLVST Trigger: TGTGCTCACCAGCTGCAAGCAGCTGTCTGAGACTCC...ACACTTCACCTCACACCTGGAAGTGTTCTTAAGGGACGAGGGGCAGTGTACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGGGACATCGACACCACACAGGGAGTCCCAGTTGTAACTCCACTCGACCGTACACAGAACTGTAGTTaGTGCAACAGTCATTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARDIDTTQGVPVVTPLDRTQNCS*CNSHCG Trigger: CCCACAATGACTGTTGCATCAACTACAGTTCTGTGT...ACGGTCGAGTGGAGTTACAACTGGGACTCCCTGTGTGGTGTCGATGTCCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGAGGACCAAACGTCTGCGGGCAGTCACCTGCCTCACCTCATCACATCTCCTTTCCTGGCTTCGGATaGCTCTGCTGTTTTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGGPNVCGQSPASPHHISFPGFG*LCCFVS Trigger: TGAAACAAAACAGCAGAGTCATCCGAAGCCAGGAAA...GGAGATGTGATGAGGTGAGGCAGGTGACTGCCCGCAGACGTTTGGTCCTCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR GCA 90 bp | TGCCAGAATGACAGGGCAGGGAGTGGAAAACACGGCTTACTCTCCCCATCCAAACCGGTCAAGAACTGTTaGTGCTGGAGTAGACAGACG | + |
|
Preference number: 4 (lower is better) Translates to: CQNDRAGSGKHGLLSPSKPVKNC*CWSRQT Trigger: CGTCTGTCTACTCCAGCAGCAACAGTTCTTGACCGG...TTTGGATGGGGAGAGTAAGCCGTGTTTTCCACTCCCTGCCCTGTCATTCTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCACTCCAAGGGAGTCTCAGACAGCTGCTTGCAGCTGGTGAGCACAATGAAAGTCCACCCCAGGTGTaGAAATACTCAGCTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GALQGSLRQLLAAGEHNESPPQV*KYSALN Trigger: ATTCAGAGCTGAGTATTTGCACACCTGGGGTGGACT...TTCATTGTGCTCACCAGCTGCAAGCAGCTGTCTGAGACTCCCTTGGAGTGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| CDS-3UTR GCA 90 bp | ACCCTGGCTAATAACAGGGGAAAGGGCAAGGAGGACCAAACGTCTGCGGGCAGTACTGGTCCATGTGAATaGCCTGAAGAATCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLANNRGKGKEDQTSAGSTGPCE*PEESGS Trigger: AGAACCAGATTCTTCAGGGCATTCACATGGACCAGT...ACTGCCCGCAGACGTTTGGTCCTCCTTGCCCTTTCCCCTGTTATTAGCCAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGTTACCCTGGCTAATAACAGGGGAAAGGGCAAGGAGGACCAAACGTCTAGGCGGTCAACCTTCTaGAAGGCCTTGATGACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TEVTLANNRGKGKEDQTSRRSTF*KALMTS Trigger: CGAGGTCATCAAGGCCTTGCAGAAGGTTGACCGCCT...AGACGTTTGGTCCTCCTTGCCCTTTCCCCTGTTATTAGCCAGGGTAACTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR CCA 90 bp | GACGCCCAGAGGGGCATGAGGAGGTCCAGGCTGTATCCGGTCAAGAACTGTTGCTTCTTTGGCGCAGCTTaGTTTCAACCCAAATATACA | + |
|
Preference number: 4 (lower is better) Translates to: DAQRGMRRSRLYPVKNCCFFGAA*FQPKYT Trigger: TGTATATTTGGGTTGAAACCAAGCTGCGCCAAAGAA...GCAACAGTTCTTGACCGGATACAGCCTGGACCTCCTCATGCCCCTCTGGGCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| CDS-3UTR CCA 90 bp | CAAGGAGGACCAAACGTCTGCGGGCAGTCACCTGCCTCACCTCATCACATCTCCTCATCTCTGGAGAATTaGTCATTACTGAGGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGGPNVCGQSPASPHHISSSLEN*SLLRKV Trigger: CACCTTCCTCAGTAATGACCAATTCTCCAGAGATGA...GGAGATGTGATGAGGTGAGGCAGGTGACTGCCCGCAGACGTTTGGTCCTCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTCATTACTGAGGAAGGTGTAAGACGCCCAGAGGGGCATGAGGAGGTCCAGTCTTCTCACCGCACCTaGATTTGTTGCAAGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LVITEEGVRRPEGHEEVQSSHRT*ICCKSI Trigger: TATGGACTTGCAACAAATTCAGGTGCGGTGAGAAGA...CTGGACCTCCTCATGCCCCTCTGGGCGTCTTACACCTTCCTCAGTAATGACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| CDS-3UTR TCA 90 bp | ACAGAAGTTACCCTGGCTAATAACAGGGGAAAGGGCAAGGAGGACCAAACGTCTCTTCAGCACCATGCTTaGAGGCAGGTCCATAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TEVTLANNRGKGKEDQTSLQHHA*RQVHSQ Trigger: TTGGCTATGGACCTGCCTTCAAGCATGGTGCTGAAG...AGACGTTTGGTCCTCCTTGCCCTTTCCCCTGTTATTAGCCAGGGTAACTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAGAGAGTAAGAAGGAGGCCGAGTCCCCAGTATTTCTGCAGGGATGATGTCTGGTTAAGGCTGCCATaGCTTCCATTATTGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQRVRRRPSPQYFCRDDVWLRLP*LPLLGA Trigger: AGCTCCCAATAATGGAAGTCATGGCAGCCTTAACCA...GACATCATCCCTGCAGAAATACTGGGGACTCGGCCTCCTTCTTACTCTCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGGGACATCGACACCACACAGGGAGTCCCAGTTGTAACTCCACTCGACCGTAACTTTTTACTTCTTTaGCGCAGCTTGGTTTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: ARDIDTTQGVPVVTPLDRNFLLL*RSLVST Trigger: GGTTGAAACCAAGCTGCGCCAAAGAAGTAAAAAGTT...ACGGTCGAGTGGAGTTACAACTGGGACTCCCTGTGTGGTGTCGATGTCCCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGCCTCACCTCATCACATCTCCTGAACACATGGCTCCCCACAGCCTCCATTGGAATCCGAAGATCCTaGTACAGACAGTTGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCLTSSHLLNTWLPTASIGIRRS*YRQLEK Trigger: CTTTTCCAACTGTCTGTACCAGGATCTTCGGATTCC...AATGGAGGCTGTGGGGAGCCATGTGTTCAGGAGATGTGATGAGGTGAGGCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGAGAGTAAGAAGGAGGCCGAGTCCCCAGTATTTCTGCAGGGATGATGTCGGAATCAGAATTTCCTaGCTTCGGATGACTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQRVRRRPSPQYFCRDDVGIRIS*LRMTLL Trigger: CAGCAGAGTCATCCGAAGCCAGGAAATTCTGATTCC...GACATCATCCCTGCAGAAATACTGGGGACTCGGCCTCCTTCTTACTCTCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR TCA 90 bp | ACCCTGGCTAATAACAGGGGAAAGGGCAAGGAGGACCAAACGTCTGCGGGCAGTAAGTTGTCAGAGCCATaGAATCCACTTCCACAATAT | + |
|
Preference number: 4 (lower is better) Translates to: TLANNRGKGKEDQTSAGSKLSEP*NPLPQY Trigger: ATATTGTGGAAGTGGATTTCATGGCTCTGACAACTT...ACTGCCCGCAGACGTTTGGTCCTCCTTGCCCTTTCCCCTGTTATTAGCCAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGACATCGACACCACACAGGGAGTCCCAGTTGTAACTCCACTCGACCGTTTCATTGGATGTTGATTTaGTTGGACACTGAGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGHRHHTGSPSCNSTRPFHWMLI*LDTETG Trigger: TCCTGTCTCAGTGTCCAATCAAATCAACATCCAATG...AAACGGTCGAGTGGAGTTACAACTGGGACTCCCTGTGTGGTGTCGATGTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCACTCCAAGGGAGTCTCAGACAGCTGCTTGCAGCTGGTGAGCACAATGAACAAAGCAGCGGCCTTTaGAACTTTTTACTTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GALQGSLRQLLAAGEHNEQSSGL*NFLLLW Trigger: CCAAAGAAGTAAAAAGTTGCAAAGGCCGCTGCTTTG...TTCATTGTGCTCACCAGCTGCAAGCAGCTGTCTGAGACTCCCTTGGAGTGCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| CDS-3UTR GCA 90 bp | TTGGTCATTACTGAGGAAGGTGTAAGACGCCCAGAGGGGCATGAGGAGGTCCAGACTCCGGGGTATCGATaGTTTCACATGTTTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LVITEEGVRRPEGHEEVQTPGYR*FHMFLL Trigger: TAGAAGAAACATGTGAAAGCATCGATACCCCGGAGT...CTGGACCTCCTCATGCCCCTCTGGGCGTCTTACACCTTCCTCAGTAATGACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| CDS-3UTR CCA 90 bp | TACATCAATGTCAGTGGCAATGTCGGTGAGGGGAAGTTACATCACTGTGTCATTGCACTTTGTAGGTGTTaGGGTCTTTGGCAGGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YINVSGNVGEGKLHHCVIALCRC*GLWQGG Trigger: CCCGCCCTGCCAAAGACCCCAACACCTACAAAGTGC...AATGACACAGTGATGTAACTTCCCCTCACCGACATTGCCACTGACATTGATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR CCA 90 bp | CACGTACACTGCCCCTCGTCCCTTAAGAACACTTCCAGGTGTGAGGTGAAGTGTCTCAAAGTCCTTGATTaGCACAATCCAAGGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: HVHCPSSLKNTSRCEVKCLKVLD*HNPRVT Trigger: TGTGACCCTTGGATTGTGCCAATCAAGGACTTTGAG...ACACTTCACCTCACACCTGGAAGTGTTCTTAAGGGACGAGGGGCAGTGTACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR TCA 90 bp | CAGGGACATCGACACCACACAGGGAGTCCCAGTTGTAACTCCACTCGACCGTTTGGCTTCATAGTTAAATaGATAGTATGTCTCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QGHRHHTGSPSCNSTRPFGFIVK*IVCLWN Trigger: GTTCCAGAGACATACTATTCATTTAACTATGAAGCC...AAACGGTCGAGTGGAGTTACAACTGGGACTCCCTGTGTGGTGTCGATGTCCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAGAGAGTAAGAAGGAGGCCGAGTCCCCAGTATTTCTGCAGGGATGATGTCACAATATTTCCTCTCTaGTGGATTCAACGCAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQRVRRRPSPQYFCRDDVTIFPL*WIQRKL Trigger: CAACTTGCGTTGAATCCATCAGAGAGGAAATATTGT...GACATCATCCCTGCAGAAATACTGGGGACTCGGCCTCCTTCTTACTCTCTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR CCA 90 bp | GATGAGGTTCAGGCATTTATCCAAGCCCAGGTCCTTCAGGCCGTCCATCAGCATAACTTTTTACTTCTTTaGCGCAGCTTGGTTTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: DEVQAFIQAQVLQAVHQHNFLLL*RSLVST Trigger: GGTTGAAACCAAGCTGCGCCAAAGAAGTAAAAAGTT...ATGCTGATGGACGGCCTGAAGGACCTGGGCTTGGATAAATGCCTGAACCTCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| CDS-3UTR CCA 90 bp | TCCCAGAGAGTAAGAAGGAGGCCGAGTCCCCAGTATTTCTGCAGGGATGATGTCGACTTGGGTTGTAAATaGGTTTCTTTAGAAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQRVRRRPSPQYFCRDDVDLGCK*VSLEGG Trigger: ACCACCTTCTAAAGAAACCCATTTACAACCCAAGTC...GACATCATCCCTGCAGAAATACTGGGGACTCGGCCTCCTTCTTACTCTCTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR GCA 90 bp | ACAGAAGTTACCCTGGCTAATAACAGGGGAAAGGGCAAGGAGGACCAAACGTCTCAAAGCAGCGGCCTTTaGAACTTTTTACTTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TEVTLANNRGKGKEDQTSQSSGL*NFLLLW Trigger: CCAAAGAAGTAAAAAGTTGCAAAGGCCGCTGCTTTG...AGACGTTTGGTCCTCCTTGCCCTTTCCCCTGTTATTAGCCAGGGTAACTTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR GCA 90 bp | CACTTTCCTAGAACCATTACTTACAGAGGAAGGAATACAGTCAAACACTTCACAAGACAGACGCGGTGCTaGTTCAGTAGAATCCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HFPRTITYRGRNTVKHFTRQTRC*FSRIRG Trigger: GCCCCGGATTCTACTGAAGCAGCACCGCGTCTGTCT...TGTGAAGTGTTTGACTGTATTCCTTCCTCTGTAAGTAATGGTTCTAGGAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR CAA 72 bp | TCTTCTGTGGTCAGATTAAGCTGTTTCTCAAAGTCCTaGATTGGCACAATCCAAGGGTCACATGTGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSVVRLSCFSKS*IGTIQGSHVQP Trigger: CGGCTGCACATGTGACCCTTGGATTGTGCCAATCAAGGACTTTGAGAAACAGCTTAATCTGACCACAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| 3UTR CAA 72 bp | CTGGTACAGACAGTTGGAAAAGTCATCTCTGGAGAATaGGTCATTACTGAGGAAGGTGTAAGACGCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVQTVGKVISGE*VITEEGVRRPE Trigger: CTCTGGGCGTCTTACACCTTCCTCAGTAATGACCAATTCTCCAGAGATGACTTTTCCAACTGTCTGTACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| CDS-3UTR GCA 90 bp | TACATCAATGTCAGTGGCAATGTCGGTGAGGGGAAGTTACATCACTGTGTCATTAGTCCACCCCAGGTGTaGAAATACTCAGCTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YINVSGNVGEGKLHHCVISPPQV*KYSALN Trigger: ATTCAGAGCTGAGTATTTGCACACCTGGGGTGGACT...AATGACACAGTGATGTAACTTCCCCTCACCGACATTGCCACTGACATTGATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| 3UTR CAA 72 bp | CTCAACCGAGCAGCAGGTCCATACACAACTTTCACATaGTTCACATCCCCCAAGTACTTATTCAGGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: LNRAAGPYTTFT*FTSPKYLFRYT Trigger: TGTGTACCTGAATAAGTACTTGGGGGATGTGAACAATGTGAAAGTTGTGTATGGACCTGCTGCTCGGTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| 3UTR CAA 72 bp | GGACTAAGGGGAATCCGAAGATCCTGGTACAGACAGTaGGAAAAGTCATCTCTGGAGAATTGGTCATTACTG | + |
|
Preference number: 4 (lower is better) Translates to: GLRGIRRSWYRQ*EKSSLENWSLL Trigger: CAGTAATGACCAATTCTCCAGAGATGACTTTTCCAACTGTCTGTACCAGGATCTTCGGATTCCCCTTAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| CDS-3UTR TCA 90 bp | TACATCAATGTCAGTGGCAATGTCGGTGAGGGGAAGTTACATCACTGTGTCATTTCTTCTCACCGCACCTaGATTTGTTGCAAGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: YINVSGNVGEGKLHHCVISSHRT*ICCKSI Trigger: TATGGACTTGCAACAAATTCAGGTGCGGTGAGAAGA...AATGACACAGTGATGTAACTTCCCCTCACCGACATTGCCACTGACATTGATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR GCA 90 bp | AGAAACCCACTACACATAGAAACAAACATTGACAGAGGAAGTGAGGATGTACCAAGTCATTGTGGGTTTTaGAGTCGTCTGCACAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RNPLHIETNIDRGSEDVPSHCGF*SRLHRS Trigger: GCTCCTGTGCAGACGACTGCAAAACCCACAATGACT...TGGTACATCCTCACTTCCTCTGTCAATGTTTGTTTCTATGTGTAGTGGGTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR GCA 90 bp | GTTCACATCCCCCAAGTACTTATTCAGGTACACATACTTCTTACAGCTGCCTTGACTGGTCCATGTGAATaGCCTGAAGAATCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VHIPQVLIQVHILLTAALTGPCE*PEESGS Trigger: AGAACCAGATTCTTCAGGGCATTCACATGGACCAGT...CAAGGCAGCTGTAAGAAGTATGTGTACCTGAATAAGTACTTGGGGGATGTGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| CDS-3UTR CCA 90 bp | TTACTCAGTTTTATTAACAACAATAGGATTCCAACATCAGGTCCCCAGACCACGTCCACACAGGTCTCCTaGAAATCCAGACAGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSFINNNRIPTSGPQTTSTQVS*KSRQQF Trigger: GAACTGCTGTCTGGATTTCCAGGAGACCTGTGTGGA...CGTGGTCTGGGGACCTGATGTTGGAATCCTATTGTTGTTAATAAAACTGAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
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| CDS-3UTR TCA 90 bp | TTACTCAGTTTTATTAACAACAATAGGATTCCAACATCAGGTCCCCAGACCACGTTCCATGCCGTGATCTaGAATGAGGATGAGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSFINNNRIPTSGPQTTFHAVI*NEDEVQ Trigger: CTGAACCTCATCCTCATTTCAGATCACGGCATGGAA...CGTGGTCTGGGGACCTGATGTTGGAATCCTATTGTTGTTAATAAAACTGAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR CCA 90 bp | AGAAACCCACTACACATAGAAACAAACATTGACAGAGGAAGTGAGGATGTACCACGAAGTGTAAGCGCTTaGGTAAGAAGGGTTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RNPLHIETNIDRGSEDVPRSVSA*VRRVSG Trigger: ACCTGAAACCCTTCTTACCCAAGCGCTTACACTTCG...TGGTACATCCTCACTTCCTCTGTCAATGTTTGTTTCTATGTGTAGTGGGTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR TCA 90 bp | TTACTCAGTTTTATTAACAACAATAGGATTCCAACATCAGGTCCCCAGACCACGACACAGAACTGTAGTTaGTGCAACAGTCATTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSFINNNRIPTSGPQTTTQNCS*CNSHCG Trigger: CCCACAATGACTGTTGCATCAACTACAGTTCTGTGT...CGTGGTCTGGGGACCTGATGTTGGAATCCTATTGTTGTTAATAAAACTGAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
||
| CDS-3UTR TCA 90 bp | TTACTCAGTTTTATTAACAACAATAGGATTCCAACATCAGGTCCCCAGACCACGGTTTCTCAAAGTCCTTaGTTGGCACAATCCAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSFINNNRIPTSGPQTTVSQSP*LAQSKG Trigger: ACCCTTGGATTGTGCCAATCAAGGACTTTGAGAAAC...CGTGGTCTGGGGACCTGATGTTGGAATCCTATTGTTGTTAATAAAACTGAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR GCA 90 bp | AGAAACCCACTACACATAGAAACAAACATTGACAGAGGAAGTGAGGATGTACCACATACTTCTTACAGCTaGCTTGTTCCATGCCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RNPLHIETNIDRGSEDVPHTSYS*LVPCRD Trigger: ATCACGGCATGGAACAAGGCAGCTGTAAGAAGTATG...TGGTACATCCTCACTTCCTCTGTCAATGTTTGTTTCTATGTGTAGTGGGTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR GCA 90 bp | ACCGTTTCCAAACAATGCAAAAGTGTAGAGGACTGTATCAAATATAAGACTCTTGTCAAGAACTGTTGCTaGTGGAGTAGACAGACGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TVSKQCKSVEDCIKYKTLVKNCC*WSRQTR Trigger: CCGCGTCTGTCTACTCCAGCAGCAACAGTTCTTGAC...AAGAGTCTTATATTTGATACAGTCCTCTACACTTTTGCATTGTTTGGAAACGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR TCA 90 bp | ACCGTTTCCAAACAATGCAAAAGTGTAGAGGACTGTATCAAATATAAGACTCTTCCTTGTTCCATGCCGTaGTCTGAAATGAGGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVSKQCKSVEDCIKYKTLPCSMP*SEMRMR Trigger: CCTCATCCTCATTTCAGATCACGGCATGGAACAAGG...AAGAGTCTTATATTTGATACAGTCCTCTACACTTTTGCATTGTTTGGAAACGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR GCA 90 bp | ACCGTTTCCAAACAATGCAAAAGTGTAGAGGACTGTATCAAATATAAGACTCTTAGTCATTGTGGGTTTTaGAGTCGTCTGCACAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVSKQCKSVEDCIKYKTLSHCGF*SRLHRS Trigger: GCTCCTGTGCAGACGACTGCAAAACCCACAATGACT...AAGAGTCTTATATTTGATACAGTCCTCTACACTTTTGCATTGTTTGGAAACGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
||
| CDS-3UTR TCA 90 bp | CACTTTCCTAGAACCATTACTTACAGAGGAAGGAATACAGTCAAACACTTCACAAAGAGCTTGCATGTTTaGAAACAAGTTGTCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HFPRTITYRGRNTVKHFTKSLHV*KQVVRA Trigger: GGCTCTGACAACTTGTTTTCAAACATGCAAGCTCTT...TGTGAAGTGTTTGACTGTATTCCTTCCTCTGTAAGTAATGGTTCTAGGAAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR TCA 90 bp | CACTTTCCTAGAACCATTACTTACAGAGGAAGGAATACAGTCAAACACTTCACAAGCACAATGAAGAAGTaGGTCGGAATCAGAATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HFPRTITYRGRNTVKHFTSTMKK*VGIRIS Trigger: GGAAATTCTGATTCCGACTCACTTCTTCATTGTGCT...TGTGAAGTGTTTGACTGTATTCCTTCCTCTGTAAGTAATGGTTCTAGGAAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR GCA 90 bp | GAATGCGTTTACATCACTCTCTTCCTGCTACAAGCTTCTACACGAAGGGTAATCTCTTGTTATCAATTATaGCATGGGATTCCGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: ECVYITLFLLQASTRRVISCYQL*HGIPDK Trigger: TTTATCCGGAATCCCATGGCATAATTGATAACAAGA...GATTACCCTTCGTGTAGAAGCTTGTAGCAGGAAGAGAGTGATGTAAACGCATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR GCA 90 bp | AGATCCTGGTACAGACAGTTGGAAAAGTCATCTCTGGAGAATTGGTCATTACTGTCTTGTTATCAATTATaGCATGGGATTCCGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSWYRQLEKSSLENWSLLSCYQL*HGIPDK Trigger: TTTATCCGGAATCCCATGGCATAATTGATAACAAGA...CAGTAATGACCAATTCTCCAGAGATGACTTTTCCAACTGTCTGTACCAGGATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| CDS-3UTR CCA 90 bp | CACTTTCCTAGAACCATTACTTACAGAGGAAGGAATACAGTCAAACACTTCACATTCTTGGCTGAAGATTaGCAAATGTGTTTTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: HFPRTITYRGRNTVKHFTFLAED*QMCFQP Trigger: AGGTTGAAAACACATTTGCCAATCTTCAGCCAAGAA...TGTGAAGTGTTTGACTGTATTCCTTCCTCTGTAAGTAATGGTTCTAGGAAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| 3UTR CAA 72 bp | TGTCAATTTCTGTGTCATTCAGGCCGATTCTGCCATTaGTACGGAACTAAGACATCACATTTCATGATATTT | + |
|
Preference number: 4 (lower is better) Translates to: CQFLCHSGRFCH*YGTKTSHFMIF Trigger: AAATATCATGAAATGTGATGTCTTAGTTCCGTACAAATGGCAGAATCGGCCTGAATGACACAGAAATTGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
||
| CDS-3UTR CAA 90 bp | GTGATGAGTTCCACGTCTGTGACCCGAGCTCTGTGCAAGGTCAGCAACTCCTCGACCTTCTGCAAGGCCTaGATGACCTCGCTGCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: VMSSTSVTRALCKVSNSSTFCKA*MTSLLT Trigger: AGTCAGCAGCGAGGTCATCAAGGCCTTGCAGAAGGT...CGAGGAGTTGCTGACCTTGCACAGAGCTCGGGTCACAGACGTGGAACTCATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
||
| CDS-3UTR CAA 90 bp | ACCTGCCTCACCTCATCACATCTCCTGAACACATGGCTCCCCACAGCCTCCATTACCTTCTGCAAGGCCTaGATGACCTCGCTGCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: TCLTSSHLLNTWLPTASITFCKA*MTSLLT Trigger: AGTCAGCAGCGAGGTCATCAAGGCCTTGCAGAAGGT...AATGGAGGCTGTGGGGAGCCATGTGTTCAGGAGATGTGATGAGGTGAGGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | GCCAGGGACATCGACACCACACAGGGAGTCCCAGTTGTAACTCCACTCGACCGTAAGTCCATATATGTGTaGGTTCCACACAGGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ARDIDTTQGVPVVTPLDRKSIYV*VPHRSP Trigger: AGGAGACCTGTGTGGAACCAACACATATATGGACTT...ACGGTCGAGTGGAGTTACAACTGGGACTCCCTGTGTGGTGTCGATGTCCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | TCCCAGAGAGTAAGAAGGAGGCCGAGTCCCCAGTATTTCTGCAGGGATGATGTCTGGATTCAACGCAAGTaGCCACTGAGGGTCCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SQRVRRRPSPQYFCRDDVWIQRK*PLRVQV Trigger: TACCTGGACCCTCAGTGGCAACTTGCGTTGAATCCA...GACATCATCCCTGCAGAAATACTGGGGACTCGGCCTCCTTCTTACTCTCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | GCCAGGGACATCGACACCACACAGGGAGTCCCAGTTGTAACTCCACTCGACCGTCCACAGTTTTTCAGCTaGCTAATGACAGGAAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ARDIDTTQGVPVVTPLDRPQFFS*LMTGRS Trigger: ACTTCTTCCTGTCATTAGCAAGCTGAAAAACTGTGG...ACGGTCGAGTGGAGTTACAACTGGGACTCCCTGTGTGGTGTCGATGTCCCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | GCCAGGGACATCGACACCACACAGGGAGTCCCAGTTGTAACTCCACTCGACCGTCTTCTTTGGGATGACTaGGGTTGTAAATGGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ARDIDTTQGVPVVTPLDRLLWDD*GCKWVS Trigger: AGAAACCCATTTACAACCCAAGTCATCCCAAAGAAG...ACGGTCGAGTGGAGTTACAACTGGGACTCCCTGTGTGGTGTCGATGTCCCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | CAGGGACATCGACACCACACAGGGAGTCCCAGTTGTAACTCCACTCGACCGTTTTCCTGGTACAGACAGTaGGAAAAGTCATCTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGHRHHTGSPSCNSTRPFSWYRQ*EKSSLE Trigger: CTCCAGAGATGACTTTTCCAACTGTCTGTACCAGGA...AAACGGTCGAGTGGAGTTACAACTGGGACTCCCTGTGTGGTGTCGATGTCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS TCA 90 bp | CTGCACAGGAGCACACGAACCTGGACAGCCTCTTCTCACCGCACCTaGATTTGTTGCAAGTCCATATATGTGTTGGTTCCACACAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHRSTRTWTASSHRT*ICCKSIYVLVPHRS Trigger: AGACCTGTGTGGAACCAACACATATATGGACTTGCAACAAATTCAGGTGCGGTGAGAAGAGGCTGTCCAGGTTCGTGTGCTCCTGTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
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| CDS-3UTR CAA 90 bp | GTGATGAGTTCCACGTCTGTGACCCGAGCTCTGTGCAAGGTCAGCAACTCCTCGCCGCACCTGAATTTGTaGCAAGTCCATATATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VMSSTSVTRALCKVSNSSPHLNL*QVHICV Trigger: AACACATATATGGACTTGCAACAAATTCAGGTGCGG...CGAGGAGTTGCTGACCTTGCACAGAGCTCGGGTCACAGACGTGGAACTCATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| CDS-3UTR CAA 90 bp | ACCTGCCTCACCTCATCACATCTCCTGAACACATGGCTCCCCACAGCCTCCATTCCAACTCTTCTTATCTaGGCACACAGAACTGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TCLTSSHLLNTWLPTASIPTLLI*AHRTVV Trigger: AACTACAGTTCTGTGTGCCAAGATAAGAAGAGTTGG...AATGGAGGCTGTGGGGAGCCATGTGTTCAGGAGATGTGATGAGGTGAGGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | TGCCAGAATGACAGGGCAGGGAGTGGAAAACACGGCTTACTCTCCCCATCCAAATGTTTCTCAAAGTCCTaGATTGGCACAATCCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CQNDRAGSGKHGLLSPSKCFSKS*IGTIQG Trigger: CCCTTGGATTGTGCCAATCAAGGACTTTGAGAAACA...TTTGGATGGGGAGAGTAAGCCGTGTTTTCCACTCCCTGCCCTGTCATTCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | GAAATGAGGATGAGGTTCAGGCATTTATCCAAGCCCAGGTCCTTCAGGCCGTCCTCACCGCACCTGAATTaGTTGCAAGTCCATATATGT | + |
|
Preference number: 5 (lower is better) Translates to: EMRMRFRHLSKPRSFRPSSPHLN*LQVHIC Trigger: ACATATATGGACTTGCAACAAATTCAGGTGCGGTGA...GGACGGCCTGAAGGACCTGGGCTTGGATAAATGCCTGAACCTCATCCTCATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| CDS-3UTR CAA 90 bp | TGCCAGAATGACAGGGCAGGGAGTGGAAAACACGGCTTACTCTCCCCATCCAAATCACCGCACCTGAATTaGTTGCAAGTCCATATATGT | + |
|
Preference number: 5 (lower is better) Translates to: CQNDRAGSGKHGLLSPSKSPHLN*LQVHIC Trigger: ACATATATGGACTTGCAACAAATTCAGGTGCGGTGA...TTTGGATGGGGAGAGTAAGCCGTGTTTTCCACTCCCTGCCCTGTCATTCTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | CACGTACACTGCCCCTCGTCCCTTAAGAACACTTCCAGGTGTGAGGTGAAGTGTCCACAGTTTTTCAGCTaGCTAATGACAGGAAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HVHCPSSLKNTSRCEVKCPQFFS*LMTGRS Trigger: ACTTCTTCCTGTCATTAGCAAGCTGAAAAACTGTGG...ACACTTCACCTCACACCTGGAAGTGTTCTTAAGGGACGAGGGGCAGTGTACGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | GTACACTGCCCCTCGTCCCTTAAGAACACTTCCAGGTGTGAGGTGAAGTGTCTTCAAATCGGCTGTCCTTaGTACCACAAAGGGTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VHCPSSLKNTSRCEVKCLQIGCP*YHKGLN Trigger: ATTCAACCCTTTGTGGTACAAAGGACAGCCGATTTG...AAGACACTTCACCTCACACCTGGAAGTGTTCTTAAGGGACGAGGGGCAGTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | GAATGCGTTTACATCACTCTCTTCCTGCTACAAGCTTCTACACGAAGGGTAATCGTCTCAGACAGCTGCTaGCAGCTGGTGAGCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: ECVYITLFLLQASTRRVIVSDSC*QLVSTM Trigger: CATTGTGCTCACCAGCTGCAAGCAGCTGTCTGAGAC...GATTACCCTTCGTGTAGAAGCTTGTAGCAGGAAGAGAGTGATGTAAACGCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | CAGGGACATCGACACCACACAGGGAGTCCCAGTTGTAACTCCACTCGACCGTTTTACAACCAAGAATTGTaGTTAGCACACATACTGACA | + |
|
Preference number: 5 (lower is better) Translates to: QGHRHHTGSPSCNSTRPFYNQEL*LAHILT Trigger: TGTCAGTATGTGTGCTAACAACAATTCTTGGTTGTA...AAACGGTCGAGTGGAGTTACAACTGGGACTCCCTGTGTGGTGTCGATGTCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | GATGAGGTTCAGGCATTTATCCAAGCCCAGGTCCTTCAGGCCGTCCATCAGCATTACAACCAAGAATTGTaGTTAGCACACATACTGACA | + |
|
Preference number: 5 (lower is better) Translates to: DEVQAFIQAQVLQAVHQHYNQEL*LAHILT Trigger: TGTCAGTATGTGTGCTAACAACAATTCTTGGTTGTA...ATGCTGATGGACGGCCTGAAGGACCTGGGCTTGGATAAATGCCTGAACCTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| CDS-3UTR CAA 90 bp | CCGCTTCCCATGCGTACAGCTCTCAATGTTATCAGGCCTATGAGGCAGTATGTACCAACTCTTCTTATCTaGGCACACAGAACTGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PLPMRTALNVIRPMRQYVPTLLI*AHRTVV Trigger: AACTACAGTTCTGTGTGCCAAGATAAGAAGAGTTGG...TACATACTGCCTCATAGGCCTGATAACATTGAGAGCTGTACGCATGGGAAGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| CDS-3UTR CAA 90 bp | GCACTCCAAGGGAGTCTCAGACAGCTGCTTGCAGCTGGTGAGCACAATGAAGAATTGGGATCATACATCTaGTTATCAATTATGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: ALQGSLRQLLAAGEHNEELGSYI*LSIMPW Trigger: CCATGGCATAATTGATAACAAGATGTATGATCCCAA...TTCTTCATTGTGCTCACCAGCTGCAAGCAGCTGTCTGAGACTCCCTTGGAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| CDS TCA 90 bp | TTTCTTCTACCCAACTCTTCTTATCTTGGCACACAGAACTGTAGTTaGTGCAACAGTCATTGTGGGTTTTGCAGTCGTCTGCACAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLLPNSSYLGTQNCS*CNSHCGFCSRLHRS Trigger: GCTCCTGTGCAGACGACTGCAAAACCCACAATGACTGTTGCATCAACTACAGTTCTGTGTGCCAAGATAAGAAGAGTTGGGTAGAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
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| CDS-3UTR CAA 90 bp | TCTCAACCGAGCAGCAGGTCCATACACAACTTTCACATTGTTCACATCCCCCAACAACTTTTTACTTCTTaGGCGCAGCTTGGTTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SQPSSRSIHNFHIVHIPQQLFTS*AQLGFN Trigger: GTTGAAACCAAGCTGCGCCAAAGAAGTAAAAAGTTG...TTGGGGGATGTGAACAATGTGAAAGTTGTGTATGGACCTGCTGCTCGGTTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| CDS-3UTR CAA 90 bp | ACATCCCCCAAGTACTTATTCAGGTACACATACTTCTTACAGCTGCCTTGTTCCCTTCTTTGGCGCAGCTaGGTTTCAACCCAAATATAC | + |
|
Preference number: 5 (lower is better) Translates to: TSPKYLFRYTYFLQLPCSLLWRS*VSTQIY Trigger: GTATATTTGGGTTGAAACCAAGCTGCGCCAAAGAAG...GGAACAAGGCAGCTGTAAGAAGTATGTGTACCTGAATAAGTACTTGGGGGATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039882.13 |
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| CDS-3UTR CAA 90 bp | AGAAACCCACTACACATAGAAACAAACATTGACAGAGGAAGTGAGGATGTACCACTTCTTTGGCGCAGCTaGGTTTCAACCCAAATATAC | + |
|
Preference number: 5 (lower is better) Translates to: RNPLHIETNIDRGSEDVPLLWRS*VSTQIY Trigger: GTATATTTGGGTTGAAACCAAGCTGCGCCAAAGAAG...TGGTACATCCTCACTTCCTCTGTCAATGTTTGTTTCTATGTGTAGTGGGTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | TTACTCAGTTTTATTAACAACAATAGGATTCCAACATCAGGTCCCCAGACCACGAAGTCCATATATGTGTaGGTTCCACACAGGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSFINNNRIPTSGPQTTKSIYV*VPHRSP Trigger: AGGAGACCTGTGTGGAACCAACACATATATGGACTT...CGTGGTCTGGGGACCTGATGTTGGAATCCTATTGTTGTTAATAAAACTGAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | TTACTCAGTTTTATTAACAACAATAGGATTCCAACATCAGGTCCCCAGACCACGCCGCACCTGAATTTGTaGCAAGTCCATATATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLSFINNNRIPTSGPQTTPHLNL*QVHICV Trigger: AACACATATATGGACTTGCAACAAATTCAGGTGCGG...CGTGGTCTGGGGACCTGATGTTGGAATCCTATTGTTGTTAATAAAACTGAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | TACATCAATGTCAGTGGCAATGTCGGTGAGGGGAAGTTACATCACTGTGTCATTTTGGGATCATACATCTaGTTATCAATTATGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: YINVSGNVGEGKLHHCVILGSYI*LSIMPW Trigger: CCATGGCATAATTGATAACAAGATGTATGATCCCAA...AATGACACAGTGATGTAACTTCCCCTCACCGACATTGCCACTGACATTGATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | CACTTTCCTAGAACCATTACTTACAGAGGAAGGAATACAGTCAAACACTTCACACAAATCGGCTGTCCTTaGTACCACAAAGGGTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HFPRTITYRGRNTVKHFTQIGCP*YHKGLN Trigger: ATTCAACCCTTTGTGGTACAAAGGACAGCCGATTTG...TGTGAAGTGTTTGACTGTATTCCTTCCTCTGTAAGTAATGGTTCTAGGAAAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | AGAAACCCACTACACATAGAAACAAACATTGACAGAGGAAGTGAGGATGTACCATACACAACTTTCACATaGTTCACATCCCCCAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RNPLHIETNIDRGSEDVPYTTFT*FTSPKY Trigger: GTACTTGGGGGATGTGAACAATGTGAAAGTTGTGTA...TGGTACATCCTCACTTCCTCTGTCAATGTTTGTTTCTATGTGTAGTGGGTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS-3UTR CAA 90 bp | CACTTTCCTAGAACCATTACTTACAGAGGAAGGAATACAGTCAAACACTTCACAGTAGTGCCATATAACTaGAAAACTCTGATACATTGG | + |
|
Preference number: 5 (lower is better) Translates to: HFPRTITYRGRNTVKHFTVVPYN*KTLIHW Trigger: CCAATGTATCAGAGTTTTCAAGTTATATGGCACTAC...TGTGAAGTGTTTGACTGTATTCCTTCCTCTGTAAGTAATGGTTCTAGGAAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105520.8 |
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| CDS GCA 72 bp | GGTGACTCGAGCTCGCGACCGTTTCCCGCTGACCCGTaGCGGGGCCCGTGCCCTGCCTGGTCGCCGTCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GDSSSRPFPADP*RGPCPAWSPSR Trigger: GCGCGACGGCGACCAGGCAGGGCACGGGCCCCGGCACGGGTCAGCGGGAAACGGTCGCGAGCTCGAGTCACC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
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| CDS CCA 72 bp | GCTCCGCCTTCTCCAGCGGCTCCTCTCCTAGGTCCATaGGCGCGAGCAGCGAAGCCGCGGCTGGTGACTCGA | + |
|
Preference number: 6 (lower is better) Translates to: APPSPAAPLLGP*ARAAKPRLVTR Trigger: TCGAGTCACCAGCCGCGGCTTCGCTGCTCGCGCCCATGGACCTAGGAGAGGAGCCGCTGGAGAAGGCGGAGC 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
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| CDS CAA 72 bp | AGCATGCCGACCAGGCGGTCAACCTTCTGCAAGGCCTaGATGACCTCGCTGCTGACTGGTCCATGTGAATGC | + |
|
Preference number: 6 (lower is better) Translates to: SMPTRRSTFCKA*MTSLLTGPCEC Trigger: GCATTCACATGGACCAGTCAGCAGCGAGGTCATCAAGGCCTTGCAGAAGGTTGACCGCCTGGTCGGCATGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105520.8 ENSMUST00000135846.2 |
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| CDS CCA 72 bp | ATACTGACAAAACCAGCGACAGCACTTTGTAGGTGTTaGGGTCTTTGGCAGGGCGGGCACGCTCCGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ILTKPATALCRC*GLWQGGHAPPS Trigger: AGAAGGCGGAGCGTGCCCGCCCTGCCAAAGACCCCAACACCTACAAAGTGCTGTCGCTGGTTTTGTCAGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
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| CDS CAA 90 bp | CAGGAGCACACGAACCTGGACAGCCTCTTCTCACCGCACCTGAATTaGTTGCAAGTCCATATATGTGTTGGTTCCACACAGGTCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QEHTNLDSLFSPHLN*LQVHICVGSTQVSW Trigger: CCAGGAGACCTGTGTGGAACCAACACATATATGGACTTGCAACAAATTCAGGTGCGGTGAGAAGAGGCTGTCCAGGTTCGTGTGCTCCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
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| CDS CAA 90 bp | AGACAGCAGTTCCCAAGGCTGACACAGGCAGCATCACAGCGACAGTaGCTGAACGTCCTTTCAAAGCAGCGGCCTTTGCAACTTTTTACT | + |
|
Preference number: 6 (lower is better) Translates to: RQQFPRLTQAASQRQ*LNVLSKQRPLQLFT Trigger: AGTAAAAAGTTGCAAAGGCCGCTGCTTTGAAAGGACGTTCAGCAACTGTCGCTGTGATGCTGCCTGTGTCAGCCTTGGGAACTGCTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
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| CDS CAA 90 bp | GAGCACACGAACCTGGACAGCCTCTTCTCACCGCACCTGAATTTGTaGCAAGTCCATATATGTGTTGGTTCCACACAGGTCTCCTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: EHTNLDSLFSPHLNL*QVHICVGSTQVSWK Trigger: TTTCCAGGAGACCTGTGTGGAACCAACACATATATGGACTTGCAACAAATTCAGGTGCGGTGAGAAGAGGCTGTCCAGGTTCGTGTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
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| CDS CCA 72 bp | CAAGTCCATATATGTGTTGGTTCCACACAGGTCTCCTaGAAATCCAGACAGCAGTTCCCAAGGCTGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: QVHICVGSTQVS*KSRQQFPRLTQ Trigger: CTGTGTCAGCCTTGGGAACTGCTGTCTGGATTTCCAGGAGACCTGTGTGGAACCAACACATATATGGACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
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| CDS TCA 72 bp | AGCACACGAACCTGGACAGCCTCTTCTCACCGCACCTaGATTTGTTGCAAGTCCATATATGTGTTGGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: STRTWTASSHRT*ICCKSIYVLVP Trigger: TGGAACCAACACATATATGGACTTGCAACAAATTCAGGTGCGGTGAGAAGAGGCTGTCCAGGTTCGTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
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| CDS CAA 72 bp | CGACAGTTGCTGAACGTCCTTTCAAAGCAGCGGCCTTaGCAACTTTTTACTTCTTTGGCGCAGCTTGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RQLLNVLSKQRP*QLFTSLAQLGF Trigger: GAAACCAAGCTGCGCCAAAGAAGTAAAAAGTTGCAAAGGCCGCTGCTTTGAAAGGACGTTCAGCAACTGTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
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| CDS CAA 72 bp | AACCTGGACAGCCTCTTCTCACCGCACCTGAATTTGTaGCAAGTCCATATATGTGTTGGTTCCACACAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: NLDSLFSPHLNL*QVHICVGSTQV Trigger: GACCTGTGTGGAACCAACACATATATGGACTTGCAACAAATTCAGGTGCGGTGAGAAGAGGCTGTCCAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
||
| CDS CAA 72 bp | ACGAACCTGGACAGCCTCTTCTCACCGCACCTGAATTaGTTGCAAGTCCATATATGTGTTGGTTCCACACAG | + |
|
Preference number: 6 (lower is better) Translates to: TNLDSLFSPHLN*LQVHICVGSTQ Trigger: CTGTGTGGAACCAACACATATATGGACTTGCAACAAATTCAGGTGCGGTGAGAAGAGGCTGTCCAGGTTCGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
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| CDS CAA 90 bp | CTTTGGCGCAGCTTGGTTTCAACCCAAATATACAACCAAGAATTGTaGTTAGCACACATACTGACAAAACCAGCGACAGCACTTTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LWRSLVSTQIYNQEL*LAHILTKPATALCR Trigger: CCTACAAAGTGCTGTCGCTGGTTTTGTCAGTATGTGTGCTAACAACAATTCTTGGTTGTATATTTGGGTTGAAACCAAGCTGCGCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
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| CDS CAA 90 bp | TTTCAAAGCAGCGGCCTTTGCAACTTTTTACTTCTTTGGCGCAGCTaGGTTTCAACCCAAATATACAACCAAGAATTGTTGTTAGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: FQSSGLCNFLLLWRS*VSTQIYNQELLLAH Trigger: GTGTGCTAACAACAATTCTTGGTTGTATATTTGGGTTGAAACCAAGCTGCGCCAAAGAAGTAAAAAGTTGCAAAGGCCGCTGCTTTGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
||
| CDS CAA 72 bp | AGCTTGGTTTCAACCCAAATATACAACCAAGAATTGTaGTTAGCACACATACTGACAAAACCAGCGACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLVSTQIYNQEL*LAHILTKPATA Trigger: TGCTGTCGCTGGTTTTGTCAGTATGTGTGCTAACAACAATTCTTGGTTGTATATTTGGGTTGAAACCAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039882.13 ENSMUST00000105520.8 ENSMUST00000135846.2 |
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