Pregenerated sensors for ENPEP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028024Ensembl transcript IDs: ENSMUST00000029658.14, ENSMUST00000169240.2, ENSMUST00000170918.8
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACTTGCGCTCCCTTTCAGCCAGGAGTCAAATAACTGGGAAGCATTaGCCAAGGCTTCTCTGTCCCCCATCTTGCATGCGAATCCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: YLRSLSARSQITGKH*PRLLCPPSCMRILR Trigger: TCTTAGGATTCGCATGCAAGATGGGGGACAGAGAAGCCTTGGGCAATGCTTCCCAGTTATTTGACTCCTGGCTGAAAGGGAGCGCAAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR GCA 90 bp | TTCACGTTTAGCCACTCGATGTTGTTCTTCACCGTCTCCAGCACTTaGTCTCTAGGTTTTGCTCCAGCGCCAGCATTTGGATATTTTGCA | + |
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Preference number: 1 (lower is better) Translates to: FTFSHSMLFFTVSST*SLGFAPAPAFGYFA Trigger: TGCAAAATATCCAAATGCTGGCGCTGGAGCAAAACCTAGAGAGCAAGTGCTGGAGACGGTGAAGAACAACATCGAGTGGCTAAACGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR CAA 90 bp | GGTATCCTGCCATCCCAGCAAATCTGCAACGGGCTTCACTTGGCCTaGAAAGTACGTCTCTATCATGGGGTACAGCTCTCTGTCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: GILPSQQICNGLHLA*KVRLYHGVQLSVIF Trigger: GAAGATGACAGAGAGCTGTACCCCATGATAGAGACGTACTTTCAAGGCCAAGTGAAGCCCGTTGCAGATTTGCTGGGATGGCAGGATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR CAA 90 bp | ATACTTGCGCTCCCTTTCAGCCAGGAGTCAAATAACTGGGAAGCATaGCCCAAGGCTTCTCTGTCCCCCATCTTGCATGCGAATCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: ILALPFSQESNNWEA*PKASLSPILHANPK Trigger: CTTAGGATTCGCATGCAAGATGGGGGACAGAGAAGCCTTGGGCAATGCTTCCCAGTTATTTGACTCCTGGCTGAAAGGGAGCGCAAGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR CAA 90 bp | AACCACTCTCTGATGGACTGTCTGTTCACGTTTAGCCACTCGATGTaGTTCTTCACCGTCTCCAGCACTTGCTCTCTAGGTTTTGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: NHSLMDCLFTFSHSM*FFTVSSTCSLGFAP Trigger: TGGAGCAAAACCTAGAGAGCAAGTGCTGGAGACGGTGAAGAACAACATCGAGTGGCTAAACGTGAACAGACAGTCCATCAGAGAGTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCACTTGCTCTCTAGGTTTTGCTCCAGCGCCAGCATTTGGATATTTTGCAAATGGCTTCCGGTATCCTaGCATCCCAGCAAATCTGCA | + |
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Preference number: 2 (lower is better) Translates to: QHLLSRFCSSASIWIFCKWLPVS*HPSKSA Trigger: TGCAGATTTGCTGGGATGGCAGGATACCGGAAGCCA...TTTGCAAAATATCCAAATGCTGGCGCTGGAGCAAAACCTAGAGAGCAAGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR CAA 90 bp | ATCAGGAGAGACAGCAGTGCATCATGCGTGACCAAGGTCAGGCTCTaGAAGCACACTTGTAATGTGCTAAATTATTTGGGGAATGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: IRRDSSASCVTKVRL*KHTCNVLNYLGNGA Trigger: GGCACCATTCCCCAAATAATTTAGCACATTACAAGTGTGCTTCAAGAGCCTGACCTTGGTCACGCATGATGCACTGCTGTCTCTCCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| 3UTR CAA 90 bp | TCAAATAACTGGGAAGCATTGCCCAAGGCTTCTCTGTCCCCCATCTaGCATGCGAATCCTAAGATAGAGGCCCGGAGTAACCTTCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: SNNWEALPKASLSPI*HANPKIEARSNLQK Trigger: TTTTTGAAGGTTACTCCGGGCCTCTATCTTAGGATTCGCATGCAAGATGGGGGACAGAGAAGCCTTGGGCAATGCTTCCCAGTTATTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCAGCACTTGCTCTCTAGGTTTTGCTCCAGCGCCAGCATTTGGATATTTTCCAGATAGTCCCAGTTaGGTTGTATCCAATTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: VSSTCSLGFAPAPAFGYFPDSPS*VVSNSR Trigger: CCTGGAATTGGATACAACTCAACTGGGACTATCTGG...AAAATATCCAAATGCTGGCGCTGGAGCAAAACCTAGAGAGCAAGTGCTGGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR-3UTR GCA 90 bp | CTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACTTTCTCCATTTTCACACTTTATTTGGGGAATGGTaGCGTCACATTCACTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LRCAALLEDNLNFLHFHTLFGEW*RHIHSG Trigger: TCCTGAGTGAATGTGACGGCACCATTCCCCAAATAA...AGTGTGAAAATGGAGAAAGTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| 3UTR-3UTR GCA 90 bp | GTCTCCAGCACTTGCTCTCTAGGTTTTGCTCCAGCGCCAGCATTTGGATATTTTCATTTCCAGATACCTTaGCAAGAGTTTAACATCCTT | + |
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Preference number: 2 (lower is better) Translates to: VSSTCSLGFAPAPAFGYFHFQIP*QEFNIL Trigger: AAGGATGTTAAACTCTTGGCAAGGTATCTGGAAATG...AAAATATCCAAATGCTGGCGCTGGAGCAAAACCTAGAGAGCAAGTGCTGGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR-3UTR GCA 90 bp | ATAATATTGGGGTCTTTGAGCATTTCCAGATACCTTGCCAAGAGTTTAACATCCTCCACGCTGCCTCATTaGCAGAGTTCTGCATTCCAT | + |
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Preference number: 2 (lower is better) Translates to: IILGSLSISRYLAKSLTSSTLPH*QSSAFH Trigger: ATGGAATGCAGAACTCTGGCAATGAGGCAGCGTGGA...GGATGTTAAACTCTTGGCAAGGTATCTGGAAATGCTCAAAGACCCCAATATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR CAA 90 bp | TCTGTCATTGATTGTAAATCTGCTGACCAGATAGTCCCAGTTGAGTaGTATCCAATTCCAGGCCATTGTCTTCCCATAACTGTTGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: SVIDCKSADQIVPVE*YPIPGHCLPITVVG Trigger: TCCTACAACAGTTATGGGAAGACAATGGCCTGGAATTGGATACAACTCAACTGGGACTATCTGGTCAGCAGATTTACAATCAATGACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR-3UTR TCA 90 bp | CTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACTTTCTCCATTTTCACACTCATTCCTTCAATCCTTaGTCAAAACTTAAGCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LRCAALLEDNLNFLHFHTHSFNP*SKLKPR Trigger: CCTTGGCTTAAGTTTTGATCAAGGATTGAAGGAATG...AGTGTGAAAATGGAGAAAGTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| 3UTR-3UTR TCA 90 bp | TCTATAAGAAGACATATCCTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACGCCTTCTCTCCTTCCTaGACAGTTTCCAATTACTTT | + |
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Preference number: 2 (lower is better) Translates to: SIRRHILRCAALLEDNLNAFSPS*TVSNYF Trigger: AAAGTAATTGGAAACTGTTCAGGAAGGAGAGAAGGC...GTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAGGATATGTCTTCTTATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| 3UTR-3UTR TCA 90 bp | CAGCACTTGCTCTCTAGGTTTTGCTCCAGCGCCAGCATTTGGATATTTTGCAAAAATCCTCTTCTGATTTaGGATACATGGTCAAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: QHLLSRFCSSASIWIFCKNPLLI*DTWSSS Trigger: TGAACTTGACCATGTATCTCAAATCAGAAGAGGATT...TTTGCAAAATATCCAAATGCTGGCGCTGGAGCAAAACCTAGAGAGCAAGTGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR-3UTR CCA 90 bp | ATAACTGTTGTAGGAGATGTAGCGGATGACGGTAAATACATCCTGAGTTTTAATAGTACGTCTCTATCATaGGGTACAGCTCTCTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: ITVVGDVADDGKYILSFNSTSLS*GTALCH Trigger: ATGACAGAGAGCTGTACCCCATGATAGAGACGTACT...ATTAAAACTCAGGATGTATTTACCGTCATCCGCTACATCTCCTACAACAGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCTAACCCATAGAGCAGTTTTTCTTTCTCTTGGGCAAGCGATGTTTTCTGATCATTTCCAGATACCTTaGCAAGAGTTTAACATCCTT | + |
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Preference number: 2 (lower is better) Translates to: KLTHRAVFLSLGQAMFSDHFQIP*QEFNIL Trigger: AAGGATGTTAAACTCTTGGCAAGGTATCTGGAAATG...ATCAGAAAACATCGCTTGCCCAAGAGAAAGAAAAACTGCTCTATGGGTTAGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169240.2 ENSMUST00000170918.8 |
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| 3UTR-3UTR TCA 90 bp | TCACTCAGGAGTAAGGTGATACTGGGAAACAATGTGTTTTTCAAGGTAATAATTGTAAAGACTTTCCCATaGAGAACACTTAGCAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: SLRSKVILGNNVFFKVIIVKTFP*RTLSRN Trigger: ATTTCTGCTAAGTGTTCTTCATGGGAAAGTCTTTAC...AATTATTACCTTGAAAAACACATTGTTTCCCAGTATCACCTTACTCCTGAGTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| 3UTR-3UTR GCA 90 bp | TCACTCAGGAGTAAGGTGATACTGGGAAACAATGTGTTTTTCAAGGTAATAATTAAGCTAGGACCAAATTaGTCCATTTTCACAGATCTA | + |
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Preference number: 2 (lower is better) Translates to: SLRSKVILGNNVFFKVIIKLGPN*SIFTDL Trigger: TAGATCTGTGAAAATGGAGCAATTTGGTCCTAGCTT...AATTATTACCTTGAAAAACACATTGTTTCCCAGTATCACCTTACTCCTGAGTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| 3UTR-3UTR CCA 90 bp | TCACTCAGGAGTAAGGTGATACTGGGAAACAATGTGTTTTTCAAGGTAATAATTAGTCAGTCATTTCTTTaGCTCATTCCTTCAATCCTT | + |
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Preference number: 2 (lower is better) Translates to: SLRSKVILGNNVFFKVIISQSFL*LIPSIL Trigger: AAGGATTGAAGGAATGAGCCAAAGAAATGACTGACT...AATTATTACCTTGAAAAACACATTGTTTCCCAGTATCACCTTACTCCTGAGTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| 3UTR GCA 72 bp | GTCTGTAAAACAGGCCATCTCAGGCTCCGCCCACGGTaGAGCAGAGGCACAGATGACGTGCCTTCACCCTTG | + |
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Preference number: 3 (lower is better) Translates to: VCKTGHLRLRPR*SRGTDDVPSPL Trigger: CAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGAGCCTGAGATGGCCTGTTTTACAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| 3UTR GCA 72 bp | GATGTGGCTTCCGGTATCCTGCCATCCCAGCAAATCTaGAACGGGCTTCACTTGGCCTTGAAAGTACGTCTC | + |
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Preference number: 3 (lower is better) Translates to: DVASGILPSQQI*NGLHLALKVRL Trigger: GAGACGTACTTTCAAGGCCAAGTGAAGCCCGTTGCAGATTTGCTGGGATGGCAGGATACCGGAAGCCACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR TCA 72 bp | CAGAGTTCTGCATTCCATAGCGGTACACAAGCAGCCTaGGGTTTACCGGAATACTTGCGCTCCCTTTCAGCC | + |
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Preference number: 3 (lower is better) Translates to: QSSAFHSGTQAA*GLPEYLRSLSA Trigger: GGCTGAAAGGGAGCGCAAGTATTCCGGTAAACCTCAGGCTGCTTGTGTACCGCTATGGAATGCAGAACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR GCA 72 bp | TCCCTTTCAGCCAGGAGTCAAATAACTGGGAAGCATTaGCCAAGGCTTCTCTGTCCCCCATCTTGCATGCGA | + |
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Preference number: 3 (lower is better) Translates to: SLSARSQITGKH*PRLLCPPSCMR Trigger: TCGCATGCAAGATGGGGGACAGAGAAGCCTTGGGCAATGCTTCCCAGTTATTTGACTCCTGGCTGAAAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR-3UTR CAA 90 bp | CACCGTCTCCAGCACTTGCTCTCTAGGTTTTGCTCCAGCGCCAGCATTTGGATAAATAACTGGGAAGCATaGCCCAAGGCTTCTCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: HRLQHLLSRFCSSASIWINNWEA*PKASLS Trigger: GGACAGAGAAGCCTTGGGCAATGCTTCCCAGTTATT...TATCCAAATGCTGGCGCTGGAGCAAAACCTAGAGAGCAAGTGCTGGAGACGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR GCA 72 bp | AACTTTGCACGCATCAGGAGAGACAGCAGTGCATCATaGGTGACCAAGGTCAGGCTCTTGAAGCACACTTGT | + |
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Preference number: 3 (lower is better) Translates to: NFARIRRDSSAS*VTKVRLLKHTC Trigger: ACAAGTGTGCTTCAAGAGCCTGACCTTGGTCACGCATGATGCACTGCTGTCTCTCCTGATGCGTGCAAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| 3UTR GCA 72 bp | GATACTGCTCTAGGGTATAGTTCCACGCTGCCTCATTaGCAGAGTTCTGCATTCCATAGCGGTACACAAGCA | + |
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Preference number: 3 (lower is better) Translates to: DTALGYSSTLPH*QSSAFHSGTQA Trigger: TGCTTGTGTACCGCTATGGAATGCAGAACTCTGGCAATGAGGCAGCGTGGAACTATACCCTAGAGCAGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR-3UTR CAA 90 bp | TGTTCACGTTTAGCCACTCGATGTTGTTCTTCACCGTCTCCAGCACTTGCTCTCATAGTCCCAGTTGAGTaGTATCCAATTCCAGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: CSRLATRCCSSPSPALALIVPVE*YPIPGH Trigger: ATGGCCTGGAATTGGATACAACTCAACTGGGACTAT...GAGAGCAAGTGCTGGAGACGGTGAAGAACAACATCGAGTGGCTAAACGTGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR-3UTR CAA 90 bp | ATAATATTGGGGTCTTTGAGCATTTCCAGATACCTTGCCAAGAGTTTAACATCCTTCCACGCTGCCTCATaGCCAGAGTTCTGCATTCCA | + |
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Preference number: 3 (lower is better) Translates to: IILGSLSISRYLAKSLTSFHAAS*PEFCIP Trigger: TGGAATGCAGAACTCTGGCAATGAGGCAGCGTGGAA...GGATGTTAAACTCTTGGCAAGGTATCTGGAAATGCTCAAAGACCCCAATATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR-3UTR CAA 90 bp | GTCTCCAGCACTTGCTCTCTAGGTTTTGCTCCAGCGCCAGCATTTGGATATTTTAAATCCTCTTCTGATTaGAGATACATGGTCAAGTTC | + |
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Preference number: 3 (lower is better) Translates to: VSSTCSLGFAPAPAFGYFKSSSD*RYMVKF Trigger: GAACTTGACCATGTATCTCAAATCAGAAGAGGATTT...AAAATATCCAAATGCTGGCGCTGGAGCAAAACCTAGAGAGCAAGTGCTGGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR-3UTR CAA 90 bp | AAGTACGTCTCTATCATGGGGTACAGCTCTCTGTCATCTTCAAACATGCTAATGCAGTTTTTCTTTCTCTaGGGCAAGCGATGTTTTCTG | + |
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Preference number: 3 (lower is better) Translates to: KYVSIMGYSSLSSSNMLMQFFFL*GKRCFL Trigger: CAGAAAACATCGCTTGCCCAAGAGAAAGAAAAACTG...CATTAGCATGTTTGAAGATGACAGAGAGCTGTACCCCATGATAGAGACGTACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCTGAACAGTTTCCAATTACTTTCATTCTTCCCTATAAAAATCCATGGAGCGAATGTGCTAAATTATTaGGGGAATGGTGCCGTCACA | + |
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Preference number: 3 (lower is better) Translates to: FLNSFQLLSFFPIKIHGANVLNY*GNGAVT Trigger: TGTGACGGCACCATTCCCCAAATAATTTAGCACATT...CGCTCCATGGATTTTTATAGGGAAGAATGAAAGTAATTGGAAACTGTTCAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR TCA 90 bp | TCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCACGTGTCAGACATTCTGGTCCTaGGGAGGGAGGGCAGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SAHGAAEAQMTCLHPCTCQTFWS*GGRAVL Trigger: CAGCACTGCCCTCCCTCCTCAGGACCAGAATGTCTG...ACACGTGCAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR GCA 90 bp | CTCAGGCTCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGGGCCGCAAGGTCTTCTaGAGCCTGGATCACCACGTA | + |
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Preference number: 4 (lower is better) Translates to: LRLRPRCSRGTDDVPSPLGRKVF*SLDHHV Trigger: TACGTGGTGATCCAGGCTGCAGAAGACCTTGCGGCC...CAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGAGCCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR TCA 90 bp | CTCAGGCTCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCCCGGAGTAACTTTGTaGTGTGGCTTCCGGTATCCT | + |
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Preference number: 4 (lower is better) Translates to: LRLRPRCSRGTDDVPSPLPGVTL*CGFRYP Trigger: AGGATACCGGAAGCCACATCACAAAGTTACTCCGGG...CAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGAGCCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR GCA 90 bp | TCAGGCTCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCTGCATCTGCCAGAGCTaGAGTTCAGTGTTGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SGSAHGAAEAQMTCLHPCCICQS*SSVLKG Trigger: GCCCTTCAACACTGAACTGCAGCTCTGGCAGATGCA...GCAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGAGCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR GCA 90 bp | CTCAGGCTCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGTTCTGGGTGATGTTCTaGCTTCCACTCACAGTGACC | + |
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Preference number: 4 (lower is better) Translates to: LRLRPRCSRGTDDVPSPLFWVMF*LPLTVT Trigger: GGTCACTGTGAGTGGAAGGCAGAACATCACCCAGAA...CAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGAGCCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR GCA 90 bp | TCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCACGTGTGGTATAGTTCCACGCTaGCTCATTGCCAGAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SAHGAAEAQMTCLHPCTCGIVPR*LIARVL Trigger: CAGAACTCTGGCAATGAGGCAGCGTGGAACTATACC...ACACGTGCAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR CCA 90 bp | CTCAGGCTCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCAGGTCGTAGTGAACTaGATTGATGAAGTCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LRLRPRCSRGTDDVPSPLQVVVN*IDEVRQ Trigger: CTGCCTGACTTCATCAATCCAGTTCACTACGACCTG...CAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGAGCCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR TCA 90 bp | TCAGGCTCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCAGCTTACAGATGAAATaGCTCTCTCCCATGGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: SGSAHGAAEAQMTCLHPCSLQMK*LSPMVG Trigger: TCCTACCATGGGAGAGAGTCATTTCATCTGTAAGCT...GCAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGAGCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR TCA 90 bp | TCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCACGTGTCCAGATAGTCCCAGTTaGGTTGTATCCAATTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SAHGAAEAQMTCLHPCTCPDSPS*VVSNSR Trigger: CCTGGAATTGGATACAACTCAACTGGGACTATCTGG...ACACGTGCAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR GCA 90 bp | GCTCATTTGAAGGGAACTTTGCACGCATCAGGAGAGACAGCAGTGCATCATGCGGAGGAGGGAGGGCAGTaGTGGCTTCCGGAGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: AHLKGTLHASGETAVHHAEEGGQ*WLPEEV Trigger: AACCTCCTCCGGAAGCCAGCACTGCCCTCCCTCCTC...CGCATGATGCACTGCTGTCTCTCCTGATGCGTGCAAAGTTCCCTTCAAATGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR CCA 90 bp | TCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCACGTGTGACATAGACCTTGAGTaGTTTGCCGCTCCTGGATTT | + |
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Preference number: 4 (lower is better) Translates to: SAHGAAEAQMTCLHPCTCDIDLE*FAAPGF Trigger: AAATCCAGGAGCGGCAAACCACTCAAGGTCTATGTC...ACACGTGCAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR GCA 90 bp | TCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCACGTGTCTGCCAGTCTTTTTCTaGGTGGTTTACTCCCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SAHGAAEAQMTCLHPCTCLPVFF*VVYSQE Trigger: TTCTTGGGAGTAAACCACGCAGAAAAAGACTGGCAG...ACACGTGCAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR CCA 90 bp | TCAGGCTCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCATCAGCCCATCTGACTaGAATATTCCATGTGTAACC | + |
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Preference number: 4 (lower is better) Translates to: SGSAHGAAEAQMTCLHPCISPSD*NIPCVT Trigger: GGTTACACATGGAATATTCCAGTCAGATGGGCTGAT...GCAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGAGCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR CCA 90 bp | TCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCACGTGTAGTACGTCTCTATCATaGGGTACAGCTCTCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAHGAAEAQMTCLHPCTCSTSLS*GTALCH Trigger: ATGACAGAGAGCTGTACCCCATGATAGAGACGTACT...ACACGTGCAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| 3UTR CAA 72 bp | TGGGAAGCATTGCCCAAGGCTTCTCTGTCCCCCATCTaGCATGCGAATCCTAAGATAGAGGCCCGGAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: WEALPKASLSPI*HANPKIEARSN Trigger: GTTACTCCGGGCCTCTATCTTAGGATTCGCATGCAAGATGGGGGACAGAGAAGCCTTGGGCAATGCTTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| 3UTR CAA 72 bp | CTCCCTTTCAGCCAGGAGTCAAATAACTGGGAAGCATaGCCCAAGGCTTCTCTGTCCCCCATCTTGCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: LPFSQESNNWEA*PKASLSPILHA Trigger: CGCATGCAAGATGGGGGACAGAGAAGCCTTGGGCAATGCTTCCCAGTTATTTGACTCCTGGCTGAAAGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGGCTCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCATATTAGAAAGTGCTaGGTATTCTTTTGGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRLRPRCSRGTDDVPSPLHIRKC*VFFWVD Trigger: ATCCACCCAAAAGAATACTCAGCACTTTCTAATATG...CAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGAGCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CCA 90 bp | TCAGGCTCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCCAGACTTCACAAAAGTaGTTTTCTTCCAGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGSAHGAAEAQMTCLHPCQTSQK*FSSSCH Trigger: ATGACAACTGGAAGAAAACCACTTTTGTGAAGTCTG...GCAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGAGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR TCA 90 bp | TCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCACGTGTAATCCTCTTCTGATTTaGGATACATGGTCAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SAHGAAEAQMTCLHPCTCNPLLI*DTWSSS Trigger: TGAACTTGACCATGTATCTCAAATCAGAAGAGGATT...ACACGTGCAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CCA 90 bp | GATGTGGCTTCCGGTATCCTGCCATCCCAGCAAATCTGCAACGGGCTTCACTTGAACAGAAAGCGTTTCTaGGTGATGTTCTGCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DVASGILPSQQICNGLHLNRKRF*VMFCLP Trigger: TGGAAGGCAGAACATCACCCAGAAACGCTTTCTGTT...CAAGTGAAGCCCGTTGCAGATTTGCTGGGATGGCAGGATACCGGAAGCCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| 3UTR CAA 72 bp | CCATCCCAGCAAATCTGCAACGGGCTTCACTTGGCCTaGAAAGTACGTCTCTATCATGGGGTACAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSQQICNGLHLA*KVRLYHGVQLS Trigger: AGAGAGCTGTACCCCATGATAGAGACGTACTTTCAAGGCCAAGTGAAGCCCGTTGCAGATTTGCTGGGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| 3UTR CAA 72 bp | ATCCTGCCATCCCAGCAAATCTGCAACGGGCTTCACTaGGCCTTGAAAGTACGTCTCTATCATGGGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: ILPSQQICNGLH*ALKVRLYHGVQ Trigger: CTGTACCCCATGATAGAGACGTACTTTCAAGGCCAAGTGAAGCCCGTTGCAGATTTGCTGGGATGGCAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR TCA 90 bp | CATCCTTCACTGAAGCTAACCCATAGAGCAGTTTTTCTTTCTCTTGGGCAAGCGGACGACCACTGGATGTaGAGACATCAGGGAGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: HPSLKLTHRAVFLSLGQADDHWM*RHQGVV Trigger: GACGACTCCCTGATGTCTTCACATCCAGTGGTCGTC...CGCTTGCCCAAGAGAAAGAAAAACTGCTCTATGGGTTAGCTTCAGTGAAGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS-3UTR GCA 90 bp | ACGTTTAGCCACTCGATGTTGTTCTTCACCGTCTCCAGCACTTGCTCTCTAGGTATAGCAGTGAACCGATaGACAGCAAAGCACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TFSHSMLFFTVSSTCSLGIAVNR*TAKHTR Trigger: CCTGGTGTGCTTTGCTGTGCATCGGTTCACTGCTAT...ACCTAGAGAGCAAGTGCTGGAGACGGTGAAGAACAACATCGAGTGGCTAAACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR CCA 90 bp | GCTCATTTGAAGGGAACTTTGCACGCATCAGGAGAGACAGCAGTGCATCATGCGGCGAAGGATCAGCTTTaGAGTCCAACAGAAAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: AHLKGTLHASGETAVHHAAKDQL*SPTESV Trigger: AACGCTTTCTGTTGGACTCCAAAGCTGATCCTTCGC...CGCATGATGCACTGCTGTCTCTCCTGATGCGTGCAAAGTTCCCTTCAAATGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| 3UTR CAA 72 bp | CTGATGGACTGTCTGTTCACGTTTAGCCACTCGATGTaGTTCTTCACCGTCTCCAGCACTTGCTCTCTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LMDCLFTFSHSM*FFTVSSTCSLG Trigger: ACCTAGAGAGCAAGTGCTGGAGACGGTGAAGAACAACATCGAGTGGCTAAACGTGAACAGACAGTCCATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCACGTTTAGCCACTCGATGTTGTTCTTCACCGTCTCCAGCACTTGCTCTCCAGGTCGTAGTGAACTaGATTGATGAAGTCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSRLATRCCSSPSPALALQVVVN*IDEVRQ Trigger: CTGCCTGACTTCATCAATCCAGTTCACTACGACCTG...GAGAGCAAGTGCTGGAGACGGTGAAGAACAACATCGAGTGGCTAAACGTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| 3UTR CAA 72 bp | TTAAGCGCCCCCATGCCCACTAATTTCATAGCTCATTaGAAGGGAACTTTGCACGCATCAGGAGAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSAPMPTNFIAH*KGTLHASGETA Trigger: TGCTGTCTCTCCTGATGCGTGCAAAGTTCCCTTCAAATGAGCTATGAAATTAGTGGGCATGGGGGCGCTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR TCA 90 bp | CTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACTTTCTCCATTTTCACACTTCTTCAAGCAGCACCTaGCTGAGCATCTGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRCAALLEDNLNFLHFHTSSSST*LSICQS Trigger: AGACTGGCAGATGCTCAGTCAGGTGCTGCTTGAAGA...AGTGTGAAAATGGAGAAAGTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR GCA 90 bp | GCTCATTTGAAGGGAACTTTGCACGCATCAGGAGAGACAGCAGTGCATCATGCGCAGAAGTTGAGCTCTTaGCAAAGCAAAAGCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: AHLKGTLHASGETAVHHAQKLSS*QSKSII Trigger: GATGATGCTTTTGCTTTGGCAAGAGCTCAACTTCTG...CGCATGATGCACTGCTGTCTCTCCTGATGCGTGCAAAGTTCCCTTCAAATGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CCA 90 bp | TCTATAAGAAGACATATCCTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACAGGTTGGGAAGGAGCTaGGGTTGTGTCCTGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SIRRHILRCAALLEDNLNRLGRS*GCVLLT Trigger: TGTGAGCAGGACACAACCCCAGCTCCTTCCCAACCT...GTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAGGATATGTCTTCTTATAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR TCA 90 bp | TTTCTTTCTCTTGGGCAAGCGATGTTTTCTGATACTGCTCTAGGGTATAGTTCCTCTTCAAGCAGCACCTaGCTGAGCATCTGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLSLGQAMFSDTALGYSSSSSST*LSICQS Trigger: AGACTGGCAGATGCTCAGTCAGGTGCTGCTTGAAGA...GGAACTATACCCTAGAGCAGTATCAGAAAACATCGCTTGCCCAAGAGAAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS-3UTR TCA 90 bp | AAGTACGTCTCTATCATGGGGTACAGCTCTCTGTCATCTTCAAACATGCTAATGTCTTCAAGCAGCACCTaGCTGAGCATCTGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KYVSIMGYSSLSSSNMLMSSSST*LSICQS Trigger: AGACTGGCAGATGCTCAGTCAGGTGCTGCTTGAAGA...CATTAGCATGTTTGAAGATGACAGAGAGCTGTACCCCATGATAGAGACGTACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR TCA 90 bp | GCGCAGTTAAGCGCCCCCATGCCCACTAATTTCATAGCTCATTTGAAGGGAACTCATTATCAGCCCATCTaGCTGGAATATTCCATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AQLSAPMPTNFIAHLKGTHYQPI*LEYSMC Trigger: ACACATGGAATATTCCAGTCAGATGGGCTGATAATG...AGTTCCCTTCAAATGAGCTATGAAATTAGTGGGCATGGGGGCGCTTAACTGCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CCA 90 bp | CGTGACATAAATACAGTACTTAGCAAAAGCAGAACTGGTTTCAAAGGCTCCCCTTTGGTCTCCCTGATGTaGAGCCATAGGTCACGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDINTVLSKSRTGFKGSPLVSLM*SHRSRV Trigger: CACTCGTGACCTATGGCTCCACATCAGGGAGACCAA...AGGGGAGCCTTTGAAACCAGTTCTGCTTTTGCTAAGTACTGTATTTATGTCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| 3UTR CAA 72 bp | GACAGCAGTGCATCATGCGTGACCAAGGTCAGGCTCTaGAAGCACACTTGTAATGTGCTAAATTATTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSSASCVTKVRL*KHTCNVLNYLG Trigger: CCCCAAATAATTTAGCACATTACAAGTGTGCTTCAAGAGCCTGACCTTGGTCACGCATGATGCACTGCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| 3UTR CAA 72 bp | ATGCCCACTAATTTCATAGCTCATTTGAAGGGAACTTaGCACGCATCAGGAGAGACAGCAGTGCATCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: MPTNFIAHLKGT*HASGETAVHHA Trigger: CGCATGATGCACTGCTGTCTCTCCTGATGCGTGCAAAGTTCCCTTCAAATGAGCTATGAAATTAGTGGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR TCA 90 bp | TCTATAAGAAGACATATCCTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACGAAAGCGTTTCTGGGTaGTGTTCTGCCTTCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIRRHILRCAALLEDNLNESVSG*CSAFHS Trigger: TGAGTGGAAGGCAGAACATCACCCAGAAACGCTTTC...GTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAGGATATGTCTTCTTATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR TCA 90 bp | ACTCTCTCCCATGGTAGGAAATCCTCTTCTGATTTGAGATACATGGTCAAGTTCGAAAGCGTTTCTGGGTaGTGTTCTGCCTTCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLSHGRKSSSDLRYMVKFESVSG*CSAFHS Trigger: TGAGTGGAAGGCAGAACATCACCCAGAAACGCTTTC...GAACTTGACCATGTATCTCAAATCAGAAGAGGATTTCCTACCATGGGAGAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR TCA 90 bp | GCGCAGTTAAGCGCCCCCATGCCCACTAATTTCATAGCTCATTTGAAGGGAACTACCTATTGTACACGGTaGTCCTTGAGTTGTCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: AQLSAPMPTNFIAHLKGTTYCTR*SLSCHY Trigger: ATAATGACAACTCAAGGATCACCGTGTACAATAGGT...AGTTCCCTTCAAATGAGCTATGAAATTAGTGGGCATGGGGGCGCTTAACTGCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR GCA 90 bp | GGTAGGAAATCCTCTTCTGATTTGAGATACATGGTCAAGTTCAGAGCTATTTTAGGCCGCAAGGTCTTCTaGAGCCTGGATCACCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRKSSSDLRYMVKFRAILGRKVF*SLDHHV Trigger: TACGTGGTGATCCAGGCTGCAGAAGACCTTGCGGCC...TAAAATAGCTCTGAACTTGACCATGTATCTCAAATCAGAAGAGGATTTCCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR GCA 90 bp | CGTGACATAAATACAGTACTTAGCAAAAGCAGAACTGGTTTCAAAGGCTCCCCTATAGCAGTGAACCGATaGACAGCAAAGCACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RDINTVLSKSRTGFKGSPIAVNR*TAKHTR Trigger: CCTGGTGTGCTTTGCTGTGCATCGGTTCACTGCTAT...AGGGGAGCCTTTGAAACCAGTTCTGCTTTTGCTAAGTACTGTATTTATGTCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR GCA 90 bp | CATCCTTCACTGAAGCTAACCCATAGAGCAGTTTTTCTTTCTCTTGGGCAAGCGCTGCCAGTCTTTTTCTaGGTGGTTTACTCCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HPSLKLTHRAVFLSLGQALPVFF*VVYSQE Trigger: TTCTTGGGAGTAAACCACGCAGAAAAAGACTGGCAG...CGCTTGCCCAAGAGAAAGAAAAACTGCTCTATGGGTTAGCTTCAGTGAAGGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTCTCCCATGGTAGGAAATCCTCTTCTGATTTGAGATACATGGTCAAGTTCTTCTGGGTGATGTTCTaGCTTCCACTCACAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: TLSHGRKSSSDLRYMVKFFWVMF*LPLTVT Trigger: GGTCACTGTGAGTGGAAGGCAGAACATCACCCAGAA...GAACTTGACCATGTATCTCAAATCAGAAGAGGATTTCCTACCATGGGAGAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR GCA 90 bp | CGTGACATAAATACAGTACTTAGCAAAAGCAGAACTGGTTTCAAAGGCTCCCCTTCCACGCTGCCTCATTaGCAGAGTTCTGCATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RDINTVLSKSRTGFKGSPSTLPH*QSSAFH Trigger: ATGGAATGCAGAACTCTGGCAATGAGGCAGCGTGGA...AGGGGAGCCTTTGAAACCAGTTCTGCTTTTGCTAAGTACTGTATTTATGTCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CCA 90 bp | TCACTCAGGAGTAAGGTGATACTGGGAAACAATGTGTTTTTCAAGGTAATAATTGCTTCCGGAGGAGGTTaGGAAGGAGCTGGGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRSKVILGNNVFFKVIIASGGG*EGAGVV Trigger: CACAACCCCAGCTCCTTCCCAACCTCCTCCGGAAGC...AATTATTACCTTGAAAAACACATTGTTTCCCAGTATCACCTTACTCCTGAGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CCA 90 bp | GTCTCCAGCACTTGCTCTCTAGGTTTTGCTCCAGCGCCAGCATTTGGATATTTTCGTCCTCCATGTAGGTaGTTTTGTAAAAACCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VSSTCSLGFAPAPAFGYFRPPCR*FCKNPQ Trigger: TTGTGGGTTTTTACAAAACCACCTACATGGAGGACG...AAAATATCCAAATGCTGGCGCTGGAGCAAAACCTAGAGAGCAAGTGCTGGAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR CCA 90 bp | GCCCGGAGTAACCTTCAAAAACAAACAAGCACAGAGCCAGGGCCTCAGCAAATGCAGACTTCACAAAAGTaGTTTTCTTCCAGTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ARSNLQKQTSTEPGPQQMQTSQK*FSSSCH Trigger: ATGACAACTGGAAGAAAACCACTTTTGTGAAGTCTG...CATTTGCTGAGGCCCTGGCTCTGTGCTTGTTTGTTTTTGAAGGTTACTCCGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR CCA 90 bp | CATCCTTCACTGAAGCTAACCCATAGAGCAGTTTTTCTTTCTCTTGGGCAAGCGAACAGAAAGCGTTTCTaGGTGATGTTCTGCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HPSLKLTHRAVFLSLGQANRKRF*VMFCLP Trigger: TGGAAGGCAGAACATCACCCAGAAACGCTTTCTGTT...CGCTTGCCCAAGAGAAAGAAAAACTGCTCTATGGGTTAGCTTCAGTGAAGGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCAAAAACAAACAAGCACAGAGCCAGGGCCTCAGCAAATGTTCACTATATCGCGAAGGATCAGCTTTaGAGTCCAACAGAAAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSKTNKHRARASANVHYIAKDQL*SPTESV Trigger: AACGCTTTCTGTTGGACTCCAAAGCTGATCCTTCGC...GATATAGTGAACATTTGCTGAGGCCCTGGCTCTGTGCTTGTTTGTTTTTGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTGAACAGTTTCCAATTACTTTCATTCTTCCCTATAAAAATCCATGGAGCGGACGACCACTGGATGTaGAGACATCAGGGAGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLNSFQLLSFFPIKIHGADDHWM*RHQGVV Trigger: GACGACTCCCTGATGTCTTCACATCCAGTGGTCGTC...CGCTCCATGGATTTTTATAGGGAAGAATGAAAGTAATTGGAAACTGTTCAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCTTTCTCTTGGGCAAGCGATGTTTTCTGATACTGCTCTAGGGTATAGTGAAAGCGTTTCTGGGTaGTGTTCTGCCTTCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFLSLGQAMFSDTALGYSESVSG*CSAFHS Trigger: TGAGTGGAAGGCAGAACATCACCCAGAAACGCTTTC...ACTATACCCTAGAGCAGTATCAGAAAACATCGCTTGCCCAAGAGAAAGAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACTTTCTCCATTTTCACACTGATGTAGCTTACAGATaGAATGACTCTCTCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LRCAALLEDNLNFLHFHTDVAYR*NDSLPW Trigger: CCATGGGAGAGAGTCATTTCATCTGTAAGCTACATC...AGTGTGAAAATGGAGAAAGTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR GCA 90 bp | AAGCTAACCCATAGAGCAGTTTTTCTTTCTCTTGGGCAAGCGATGTTTTCTGATTTCTGGGTGATGTTCTaGCTTCCACTCACAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: KLTHRAVFLSLGQAMFSDFWVMF*LPLTVT Trigger: GGTCACTGTGAGTGGAAGGCAGAACATCACCCAGAA...ATCAGAAAACATCGCTTGCCCAAGAGAAAGAAAAACTGCTCTATGGGTTAGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS-3UTR CCA 90 bp | CATCCTTCACTGAAGCTAACCCATAGAGCAGTTTTTCTTTCTCTTGGGCAAGCGATCAGCCCATCTGACTaGAATATTCCATGTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: HPSLKLTHRAVFLSLGQAISPSD*NIPCVT Trigger: GGTTACACATGGAATATTCCAGTCAGATGGGCTGAT...CGCTTGCCCAAGAGAAAGAAAAACTGCTCTATGGGTTAGCTTCAGTGAAGGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169240.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCAAAAACAAACAAGCACAGAGCCAGGGCCTCAGCAAATGTTCACTATATCGTCATCCACCATCTCTaGTTTCTCTTCTGGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: PSKTNKHRARASANVHYIVIHHL*FLFWHI Trigger: AATATGCCAGAAGAGAAATCAGAGATGGTGGATGAC...GATATAGTGAACATTTGCTGAGGCCCTGGCTCTGTGCTTGTTTGTTTTTGAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR TCA 90 bp | CATCCTTCACTGAAGCTAACCCATAGAGCAGTTTTTCTTTCTCTTGGGCAAGCGACCTATTGTACACGGTaGTCCTTGAGTTGTCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: HPSLKLTHRAVFLSLGQATYCTR*SLSCHY Trigger: ATAATGACAACTCAAGGATCACCGTGTACAATAGGT...CGCTTGCCCAAGAGAAAGAAAAACTGCTCTATGGGTTAGCTTCAGTGAAGGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169240.2 |
||
| CDS-3UTR CCA 90 bp | CTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACTTTCTCCATTTTCACACTCGTCCTCCATGTAGGTaGTTTTGTAAAAACCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LRCAALLEDNLNFLHFHTRPPCR*FCKNPQ Trigger: TTGTGGGTTTTTACAAAACCACCTACATGGAGGACG...AGTGTGAAAATGGAGAAAGTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CCA 90 bp | CTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACTTTCTCCATTTTCACACTGCCGGTGCCAAAATCTaGAATAGCAATTTTATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRCAALLEDNLNFLHFHTAGAKI*NSNFIQ Trigger: CTGGATAAAATTGCTATTCCAGATTTTGGCACCGGC...AGTGTGAAAATGGAGAAAGTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CCA 90 bp | GTAACCTTCAAAAACAAACAAGCACAGAGCCAGGGCCTCAGCAAATGTTCACTAGCCGGTGCCAAAATCTaGAATAGCAATTTTATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTFKNKQAQSQGLSKCSLAGAKI*NSNFIQ Trigger: CTGGATAAAATTGCTATTCCAGATTTTGGCACCGGC...TAGTGAACATTTGCTGAGGCCCTGGCTCTGTGCTTGTTTGTTTTTGAAGGTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| CDS-3UTR CCA 90 bp | TCTATAAGAAGACATATCCTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACCAGTCTTTTTCTGCGTaGTTTACTCCCAAGAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: SIRRHILRCAALLEDNLNQSFSA*FTPKNS Trigger: CGAGTTCTTGGGAGTAAACCACGCAGAAAAAGACTG...GTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAGGATATGTCTTCTTATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR CCA 90 bp | AAGTACGTCTCTATCATGGGGTACAGCTCTCTGTCATCTTCAAACATGCTAATGCAGTCTTTTTCTGCGTaGTTTACTCCCAAGAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: KYVSIMGYSSLSSSNMLMQSFSA*FTPKNS Trigger: CGAGTTCTTGGGAGTAAACCACGCAGAAAAAGACTG...CATTAGCATGTTTGAAGATGACAGAGAGCTGTACCCCATGATAGAGACGTACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| CDS-3UTR CCA 90 bp | TCTATAAGAAGACATATCCTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACAACAGAAAGCGTTTCTaGGTGATGTTCTGCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIRRHILRCAALLEDNLNNRKRF*VMFCLP Trigger: TGGAAGGCAGAACATCACCCAGAAACGCTTTCTGTT...GTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAGGATATGTCTTCTTATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR CCA 90 bp | AAGCTAACCCATAGAGCAGTTTTTCTTTCTCTTGGGCAAGCGATGTTTTCTGATGCGAAGGATCAGCTTTaGAGTCCAACAGAAAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLTHRAVFLSLGQAMFSDAKDQL*SPTESV Trigger: AACGCTTTCTGTTGGACTCCAAAGCTGATCCTTCGC...ATCAGAAAACATCGCTTGCCCAAGAGAAAGAAAAACTGCTCTATGGGTTAGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169240.2 ENSMUST00000170918.8 |
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| 3UTR CAA 72 bp | GATTGTAAATCTGCTGACCAGATAGTCCCAGTTGAGTaGTATCCAATTCCAGGCCATTGTCTTCCCATAACT | + |
|
Preference number: 4 (lower is better) Translates to: DCKSADQIVPVE*YPIPGHCLPIT Trigger: AGTTATGGGAAGACAATGGCCTGGAATTGGATACAACTCAACTGGGACTATCTGGTCAGCAGATTTACAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| CDS-3UTR TCA 90 bp | CGTGACATAAATACAGTACTTAGCAAAAGCAGAACTGGTTTCAAAGGCTCCCCTGTCATCCACCATCTCTaGTTTCTCTTCTGGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: RDINTVLSKSRTGFKGSPVIHHL*FLFWHI Trigger: AATATGCCAGAAGAGAAATCAGAGATGGTGGATGAC...AGGGGAGCCTTTGAAACCAGTTCTGCTTTTGCTAAGTACTGTATTTATGTCACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR TCA 90 bp | CTGAAGCTAACCCATAGAGCAGTTTTTCTTTCTCTTGGGCAAGCGATGTTTTCTCATTATCAGCCCATCTaGCTGGAATATTCCATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKLTHRAVFLSLGQAMFSHYQPI*LEYSMC Trigger: ACACATGGAATATTCCAGTCAGATGGGCTGATAATG...AGAAAACATCGCTTGCCCAAGAGAAAGAAAAACTGCTCTATGGGTTAGCTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169240.2 |
||
| CDS-3UTR GCA 90 bp | TCACTCAGGAGTAAGGTGATACTGGGAAACAATGTGTTTTTCAAGGTAATAATTTGGCTTCCGGTATCCTaGCATCCCAGCAAATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLRSKVILGNNVFFKVIIWLPVS*HPSKSA Trigger: TGCAGATTTGCTGGGATGGCAGGATACCGGAAGCCA...AATTATTACCTTGAAAAACACATTGTTTCCCAGTATCACCTTACTCCTGAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTCTCTTGGGCAAGCGATGTTTTCTGATACTGCTCTAGGGTATAGTTCCCAGGTAAGTGCTCATTaGGACAGACTTCACAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLSLGQAMFSDTALGYSSQVSAH*DRLHKS Trigger: ACTTTTGTGAAGTCTGTCCCAATGAGCACTTACCTG...GGAACTATACCCTAGAGCAGTATCAGAAAACATCGCTTGCCCAAGAGAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| CDS-3UTR CCA 90 bp | TATCCAATCCCACGTTCCTCCTTCATAATTTACACGATAAAACCCAATGTGATCGACATAGACCTTGAGTaGTTTGCCGCTCCTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: YPIPRSSFIIYTIKPNVIDIDLE*FAAPGF Trigger: AAATCCAGGAGCGGCAAACCACTCAAGGTCTATGTC...GATCACATTGGGTTTTATCGTGTAAATTATGAAGGAGGAACGTGGGATTGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| CDS-3UTR CCA 90 bp | GTAACCTTCAAAAACAAACAAGCACAGAGCCAGGGCCTCAGCAAATGTTCACTAGGTGTTATCCAGTCTTaGAGCATTCTCAGAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTFKNKQAQSQGLSKCSLGVIQS*SILRIE Trigger: TTCTATTCTGAGAATGCTCCAAGACTGGATAACACC...TAGTGAACATTTGCTGAGGCCCTGGCTCTGTGCTTGTTTGTTTTTGAAGGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR GCA 90 bp | CTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACTTTCTCCATTTTCACACTCATTTCCAGATACCTTaGCAAGAGTTTAACATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRCAALLEDNLNFLHFHTHFQIP*QEFNIL Trigger: AAGGATGTTAAACTCTTGGCAAGGTATCTGGAAATG...AGTGTGAAAATGGAGAAAGTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR CCA 90 bp | GTTTTTCTTTCTCTTGGGCAAGCGATGTTTTCTGATACTGCTCTAGGGTATAGTGGTGTTATCCAGTCTTaGAGCATTCTCAGAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VFLSLGQAMFSDTALGYSGVIQS*SILRIE Trigger: TTCTATTCTGAGAATGCTCCAAGACTGGATAACACC...ACTATACCCTAGAGCAGTATCAGAAAACATCGCTTGCCCAAGAGAAAGAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS-3UTR CCA 90 bp | CGTGACATAAATACAGTACTTAGCAAAAGCAGAACTGGTTTCAAAGGCTCCCCTTTTTTGGAATTTCTCTaGTGTTATCCAGTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDINTVLSKSRTGFKGSPFLEFL*CYPVLE Trigger: CTCCAAGACTGGATAACACCAGAGAAATTCCAAAAA...AGGGGAGCCTTTGAAACCAGTTCTGCTTTTGCTAAGTACTGTATTTATGTCACG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR CCA 90 bp | CTGAAGCTAACCCATAGAGCAGTTTTTCTTTCTCTTGGGCAAGCGATGTTTTCTTTTTTGGAATTTCTCTaGTGTTATCCAGTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKLTHRAVFLSLGQAMFSFLEFL*CYPVLE Trigger: CTCCAAGACTGGATAACACCAGAGAAATTCCAAAAA...AGAAAACATCGCTTGCCCAAGAGAAAGAAAAACTGCTCTATGGGTTAGCTTCAG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000169240.2 ENSMUST00000170918.8 |
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| CDS-3UTR CCA 90 bp | TTCCTGAACAGTTTCCAATTACTTTCATTCTTCCCTATAAAAATCCATGGAGCGCAGGTAAGTGCTCATTaGGACAGACTTCACAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLNSFQLLSFFPIKIHGAQVSAH*DRLHKS Trigger: ACTTTTGTGAAGTCTGTCCCAATGAGCACTTACCTG...CGCTCCATGGATTTTTATAGGGAAGAATGAAAGTAATTGGAAACTGTTCAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR TCA 90 bp | GGTAGGAAATCCTCTTCTGATTTGAGATACATGGTCAAGTTCAGAGCTATTTTACATATTAGAAAGTGCTaGGTATTCTTTTGGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRKSSSDLRYMVKFRAILHIRKC*VFFWVD Trigger: ATCCACCCAAAAGAATACTCAGCACTTTCTAATATG...TAAAATAGCTCTGAACTTGACCATGTATCTCAAATCAGAAGAGGATTTCCTACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| CDS-3UTR CCA 90 bp | TCACTCAGGAGTAAGGTGATACTGGGAAACAATGTGTTTTTCAAGGTAATAATTGGTGTTATCCAGTCTTaGAGCATTCTCAGAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLRSKVILGNNVFFKVIIGVIQS*SILRIE Trigger: TTCTATTCTGAGAATGCTCCAAGACTGGATAACACC...AATTATTACCTTGAAAAACACATTGTTTCCCAGTATCACCTTACTCCTGAGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR CCA 90 bp | ATAACTGTTGTAGGAGATGTAGCGGATGACGGTAAATACATCCTGAGTTTTAATTTTTTGGAATTTCTCTaGTGTTATCCAGTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ITVVGDVADDGKYILSFNFLEFL*CYPVLE Trigger: CTCCAAGACTGGATAACACCAGAGAAATTCCAAAAA...ATTAAAACTCAGGATGTATTTACCGTCATCCGCTACATCTCCTACAACAGTTAT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| CDS-3UTR CAA 90 bp | TCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCACGTGTGGGAAGGAGCTGGGGTaGTGTCCTGCTCACACGACC | + |
|
Preference number: 5 (lower is better) Translates to: SAHGAAEAQMTCLHPCTCGKELG*CPAHTT Trigger: GGTCGTGTGAGCAGGACACAACCCCAGCTCCTTCCC...ACACGTGCAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS CCA 90 bp | CACTGTCAGGGCAGACATTCTGGTCCTGAGGAGGGAGGGCAGTGCTaGCTTCCGGAGGAGGTTGGGAAGGAGCTGGGGTTGTGTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HCQGRHSGPEEGGQC*LPEEVGKELGLCPA Trigger: AGCAGGACACAACCCCAGCTCCTTCCCAACCTCCTCCGGAAGCCAGCACTGCCCTCCCTCCTCAGGACCAGAATGTCTGCCCTGACAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS GCA 90 bp | CTTCACTGTCAGGGCAGACATTCTGGTCCTGAGGAGGGAGGGCAGTaGTGGCTTCCGGAGGAGGTTGGGAAGGAGCTGGGGTTGTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LHCQGRHSGPEEGGQ*WLPEEVGKELGLCP Trigger: AGGACACAACCCCAGCTCCTTCCCAACCTCCTCCGGAAGCCAGCACTGCCCTCCCTCCTCAGGACCAGAATGTCTGCCCTGACAGTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS CCA 90 bp | AGGAGGGAGGGCAGTGCTGGCTTCCGGAGGAGGTTGGGAAGGAGCTaGGGTTGTGTCCTGCTCACACGACCTGGTCAAACCCACAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RREGSAGFRRRLGRS*GCVLLTRPGQTHRK Trigger: CTTTCTGTGGGTTTGACCAGGTCGTGTGAGCAGGACACAACCCCAGCTCCTTCCCAACCTCCTCCGGAAGCCAGCACTGCCCTCCCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR CAA 90 bp | TCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCACGTGTGGCAGCTTGGTGATCTaGGTCTCCCTGATGTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SAHGAAEAQMTCLHPCTCGSLVI*VSLMWS Trigger: GCTCCACATCAGGGAGACCAAGATCACCAAGCTGCC...ACACGTGCAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS GCA 90 bp | GTGCTGGCTTCCGGAGGAGGTTGGGAAGGAGCTGGGGTTGTGTCCTaGTCACACGACCTGGTCAAACCCACAGAAAGTCCCACTATTAAT | + |
|
Preference number: 5 (lower is better) Translates to: VLASGGGWEGAGVVS*SHDLVKPTESPTIN Trigger: ATTAATAGTGGGACTTTCTGTGGGTTTGACCAGGTCGTGTGAGCAGGACACAACCCCAGCTCCTTCCCAACCTCCTCCGGAAGCCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR CAA 90 bp | TCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCACGTGTGTGGTTTTCTTCCAGTaGTCATCCACCATCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SAHGAAEAQMTCLHPCTCVVFFQ*SSTISD Trigger: ATCAGAGATGGTGGATGACAACTGGAAGAAAACCAC...ACACGTGCAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS CCA 90 bp | GAGGAGGTTGGGAAGGAGCTGGGGTTGTGTCCTGCTCACACGACCTaGTCAAACCCACAGAAAGTCCCACTATTAATCCAACTGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: EEVGKELGLCPAHTT*SNPQKVPLLIQLPP Trigger: TGGTGGCAGTTGGATTAATAGTGGGACTTTCTGTGGGTTTGACCAGGTCGTGTGAGCAGGACACAACCCCAGCTCCTTCCCAACCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS TCA 90 bp | AGGGAGTCGTCCTCTTGCACGGGGAACACATCTTCAAGCAGCACCTaGCTGAGCATCTGCCAGTCTTTTTCTGCGTGGTTTACTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RESSSCTGNTSSSST*LSICQSFSAWFTPK Trigger: CTTGGGAGTAAACCACGCAGAAAAAGACTGGCAGATGCTCAGTCAGGTGCTGCTTGAAGATGTGTTCCCCGTGCAAGAGGACGACTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
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| CDS TCA 90 bp | AGATGTTATTTCAGCTGGCGTGGACACGGTGACGACCACTGGATGTaGAGACATCAGGGAGTCGTCCTCTTGCACGGGGAACACATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RCYFSWRGHGDDHWM*RHQGVVLLHGEHIF Trigger: GAAGATGTGTTCCCCGTGCAAGAGGACGACTCCCTGATGTCTTCACATCCAGTGGTCGTCACCGTGTCCACGCCAGCTGAAATAACATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029658.14 ENSMUST00000169240.2 ENSMUST00000170918.8 |
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| CDS CCA 90 bp | CAGTCCATGGTCACAGTATTTCCAAACCACTGGTGTACAAGTTCGTaGGCAACCACGCTGGCCACTCTCTGCTGGTTAGATGAGGCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: QSMVTVFPNHWCTSS*ATTLATLCWLDEAD Trigger: ATCGGCCTCATCTAACCAGCAGAGAGTGGCCAGCGTGGTTGCCCACGAACTTGTACACCAGTGGTTTGGAAATACTGTGACCATGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
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| CDS CCA 90 bp | TTGCATGCGAATCCTAAGATAGAGGCCCGGAGTAACTTTGTGATGTaGCTTCCGGTATCCTGCCATCCCAGCAAATCTGCAACGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LHANPKIEARSNFVM*LPVSCHPSKSATGF Trigger: GAAGCCCGTTGCAGATTTGCTGGGATGGCAGGATACCGGAAGCCACATCACAAAGTTACTCCGGGCCTCTATCTTAGGATTCGCATGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR CAA 90 bp | TCCGCCCACGGTGCAGCAGAGGCACAGATGACGTGCCTTCACCCTTGCACGTGTAAATCCTCTTCTGATTaGAGATACATGGTCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SAHGAAEAQMTCLHPCTCKSSSD*RYMVKF Trigger: GAACTTGACCATGTATCTCAAATCAGAAGAGGATTT...ACACGTGCAAGGGTGAAGGCACGTCATCTGTGCCTCTGCTGCACCGTGGGCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS TCA 90 bp | AGTCGTCCTCTTGCACGGGGAACACATCTTCAAGCAGCACCTGACTaGGCATCTGCCAGTCTTTTTCTGCGTGGTTTACTCCCAAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SRPLARGTHLQAAPD*ASASLFLRGLLPRT Trigger: AGTTCTTGGGAGTAAACCACGCAGAAAAAGACTGGCAGATGCTCAGTCAGGTGCTGCTTGAAGATGTGTTCCCCGTGCAAGAGGACGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
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| CDS-3UTR CAA 90 bp | GCTCATTTGAAGGGAACTTTGCACGCATCAGGAGAGACAGCAGTGCATCATGCGTGCGAAGGATCAGCTTaGGAGTCCAACAGAAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: AHLKGTLHASGETAVHHACEGSA*ESNRKR Trigger: ACGCTTTCTGTTGGACTCCAAAGCTGATCCTTCGCA...CGCATGATGCACTGCTGTCTCTCCTGATGCGTGCAAAGTTCCCTTCAAATGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS TCA 90 bp | ATATCCCATCAAACACAGATGTTATTTCAGCTGGCGTGGACACGGTaGCGACCACTGGATGTGAAGACATCAGGGAGTCGTCCTCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ISHQTQMLFQLAWTR*RPLDVKTSGSRPLA Trigger: TGCAAGAGGACGACTCCCTGATGTCTTCACATCCAGTGGTCGTCACCGTGTCCACGCCAGCTGAAATAACATCTGTGTTTGATGGGATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029658.14 ENSMUST00000169240.2 ENSMUST00000170918.8 |
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| CDS TCA 90 bp | ATTATCAGCCCATCTGACTGGAATATTCCATGTGTAACCGAGCTCTaGCGGTGGCTGCGAAGGATCAGCTTTGGAGTCCAACAGAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: IISPSDWNIPCVTEL*RWLRRISFGVQQKA Trigger: CGCTTTCTGTTGGACTCCAAAGCTGATCCTTCGCAGCCACCGTCAGAGCTCGGTTACACATGGAATATTCCAGTCAGATGGGCTGATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000169240.2 |
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| CDS-3UTR CAA 90 bp | CATCCTTCACTGAAGCTAACCCATAGAGCAGTTTTTCTTTCTCTTGGGCAAGCGCGGAATACGTGTGGTTaGAGGAGAGAGCCTCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: HPSLKLTHRAVFLSLGQARNTCG*RREPRL Trigger: TAGCCGAGGCTCTCTCCTCAAACCACACGTATTCCG...CGCTTGCCCAAGAGAAAGAAAAACTGCTCTATGGGTTAGCTTCAGTGAAGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169240.2 |
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| CDS-3UTR CAA 90 bp | AAGTACGTCTCTATCATGGGGTACAGCTCTCTGTCATCTTCAAACATGCTAATGGGCAGCTTGGTGATCTaGGTCTCCCTGATGTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KYVSIMGYSSLSSSNMLMGSLVI*VSLMWS Trigger: GCTCCACATCAGGGAGACCAAGATCACCAAGCTGCC...CATTAGCATGTTTGAAGATGACAGAGAGCTGTACCCCATGATAGAGACGTACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
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| CDS-3UTR CAA 90 bp | CGTGACATAAATACAGTACTTAGCAAAAGCAGAACTGGTTTCAAAGGCTCCCCTCAGGGAGTCGTCCTCTaGCACGGGGAACACATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RDINTVLSKSRTGFKGSPQGVVL*HGEHIF Trigger: GAAGATGTGTTCCCCGTGCAAGAGGACGACTCCCTG...AGGGGAGCCTTTGAAACCAGTTCTGCTTTTGCTAAGTACTGTATTTATGTCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
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| CDS-3UTR CAA 90 bp | AAGTACGTCTCTATCATGGGGTACAGCTCTCTGTCATCTTCAAACATGCTAATGCAGGGAGTCGTCCTCTaGCACGGGGAACACATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KYVSIMGYSSLSSSNMLMQGVVL*HGEHIF Trigger: GAAGATGTGTTCCCCGTGCAAGAGGACGACTCCCTG...CATTAGCATGTTTGAAGATGACAGAGAGCTGTACCCCATGATAGAGACGTACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR CAA 90 bp | GTCTCCAGCACTTGCTCTCTAGGTTTTGCTCCAGCGCCAGCATTTGGATATTTTTGCGAAGGATCAGCTTaGGAGTCCAACAGAAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VSSTCSLGFAPAPAFGYFCEGSA*ESNRKR Trigger: ACGCTTTCTGTTGGACTCCAAAGCTGATCCTTCGCA...AAAATATCCAAATGCTGGCGCTGGAGCAAAACCTAGAGAGCAAGTGCTGGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR CAA 90 bp | GCGCAGTTAAGCGCCCCCATGCCCACTAATTTCATAGCTCATTTGAAGGGAACTTTAATGCAGTATTTCTaGGAGGGCTCTTCCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AQLSAPMPTNFIAHLKGTLMQYF*EGSSSA Trigger: TGCAGAGGAAGAGCCCTCCAAGAAATACTGCATTAA...AGTTCCCTTCAAATGAGCTATGAAATTAGTGGGCATGGGGGCGCTTAACTGCGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CAA 90 bp | GTTTTTCTTTCTCTTGGGCAAGCGATGTTTTCTGATACTGCTCTAGGGTATAGTCAGGGAGTCGTCCTCTaGCACGGGGAACACATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VFLSLGQAMFSDTALGYSQGVVL*HGEHIF Trigger: GAAGATGTGTTCCCCGTGCAAGAGGACGACTCCCTG...ACTATACCCTAGAGCAGTATCAGAAAACATCGCTTGCCCAAGAGAAAGAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS-3UTR CAA 90 bp | CGTGACATAAATACAGTACTTAGCAAAAGCAGAACTGGTTTCAAAGGCTCCCCTCACCGTCTCCAGCACTaGCTCTCTAGGTTTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RDINTVLSKSRTGFKGSPHRLQH*LSRFCS Trigger: GGAGCAAAACCTAGAGAGCAAGTGCTGGAGACGGTG...AGGGGAGCCTTTGAAACCAGTTCTGCTTTTGCTAAGTACTGTATTTATGTCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CAA 90 bp | TTCCTGAACAGTTTCCAATTACTTTCATTCTTCCCTATAAAAATCCATGGAGCGCGAAGCACCGTCGAATaGGTACCTGCTCCCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLNSFQLLSFFPIKIHGARSTVE*VPAPQR Trigger: CCTCTGGGGAGCAGGTACCAATTCGACGGTGCTTCG...CGCTCCATGGATTTTTATAGGGAAGAATGAAAGTAATTGGAAACTGTTCAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CAA 90 bp | TCTATAAGAAGACATATCCTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACTTCCACGCTGCCTCATaGCCAGAGTTCTGCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SIRRHILRCAALLEDNLNFHAAS*PEFCIP Trigger: TGGAATGCAGAACTCTGGCAATGAGGCAGCGTGGAA...GTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAGGATATGTCTTCTTATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CAA 90 bp | TCTATAAGAAGACATATCCTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACAGCTGCAGTTCAGTGTaGAAGGGCTCAGCTATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SIRRHILRCAALLEDNLNSCSSV*KGSAMV Trigger: CACCATAGCTGAGCCCTTCAACACTGAACTGCAGCT...GTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAGGATATGTCTTCTTATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS GCA 90 bp | AGCGAAGTAGTCTTCGAAGTAATCAAATACAGCTTGGGTTATGTTTaGCGCATACTCTGCTGTCTCCTTCTGATTGGGCTGGACATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SEVVFEVIKYSLGYV*RILCCLLLIGLDID Trigger: GTCTATGTCCAGCCCAATCAGAAGGAGACAGCAGAGTATGCGGCAAACATAACCCAAGCTGTATTTGATTACTTCGAAGACTACTTCGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAGCTAACCCATAGAGCAGTTTTTCTTTCTCTTGGGCAAGCGATGTTTTCTTGCGAAGGATCAGCTTaGGAGTCCAACAGAAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LKLTHRAVFLSLGQAMFSCEGSA*ESNRKR Trigger: ACGCTTTCTGTTGGACTCCAAAGCTGATCCTTCGCA...AGAAAACATCGCTTGCCCAAGAGAAAGAAAAACTGCTCTATGGGTTAGCTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS-3UTR CAA 90 bp | CGTGACATAAATACAGTACTTAGCAAAAGCAGAACTGGTTTCAAAGGCTCCCCTTTTAGCCACTCGATGTaGTTCTTCACCGTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RDINTVLSKSRTGFKGSPFSHSM*FFTVSS Trigger: GCTGGAGACGGTGAAGAACAACATCGAGTGGCTAAA...AGGGGAGCCTTTGAAACCAGTTCTGCTTTTGCTAAGTACTGTATTTATGTCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS GCA 90 bp | TTCGAAGTAATCAAATACAGCTTGGGTTATGTTTGCCGCATACTCTaGTGTCTCCTTCTGATTGGGCTGGACATAGACCTTGAGTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FEVIKYSLGYVCRIL*CLLLIGLDIDLEWF Trigger: AAACCACTCAAGGTCTATGTCCAGCCCAATCAGAAGGAGACAGCAGAGTATGCGGCAAACATAACCCAAGCTGTATTTGATTACTTCGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACTTTCTCCATTTTCACACTTCCAATTCCAGGCCATaGTCTTCCCATAACTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LRCAALLEDNLNFLHFHTSNSRP*SSHNCC Trigger: ACAACAGTTATGGGAAGACAATGGCCTGGAATTGGA...AGTGTGAAAATGGAGAAAGTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CAA 90 bp | CTCGGCTATCCAATCCCACGTTCCTCCTTCATAATTTACACGATAAAACCCAATGTGGTTTTCTTCCAGTaGTCATCCACCATCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LGYPIPRSSFIIYTIKPNVVFFQ*SSTISD Trigger: ATCAGAGATGGTGGATGACAACTGGAAGAAAACCAC...ATTGGGTTTTATCGTGTAAATTATGAAGGAGGAACGTGGGATTGGATAGCCGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS-3UTR CAA 90 bp | TCTATAAGAAGACATATCCTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACATAGTCCCAGTTGAGTaGTATCCAATTCCAGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SIRRHILRCAALLEDNLNIVPVE*YPIPGH Trigger: ATGGCCTGGAATTGGATACAACTCAACTGGGACTAT...GTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAGGATATGTCTTCTTATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CAA 90 bp | TCTATAAGAAGACATATCCTTAGATGTGCAGCTTTGCTGGAGGACAACCTCAACTGGTGTTATCCAGTCTaGGAGCATTCTCAGAATAGA | + |
|
Preference number: 5 (lower is better) Translates to: SIRRHILRCAALLEDNLNWCYPV*EHSQNR Trigger: TCTATTCTGAGAATGCTCCAAGACTGGATAACACCA...GTTGAGGTTGTCCTCCAGCAAAGCTGCACATCTAAGGATATGTCTTCTTATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CAA 90 bp | CGTGACATAAATACAGTACTTAGCAAAAGCAGAACTGGTTTCAAAGGCTCCCCTCAGTTTTTCTTTCTCTaGGGCAAGCGATGTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RDINTVLSKSRTGFKGSPQFFFL*GKRCFL Trigger: CAGAAAACATCGCTTGCCCAAGAGAAAGAAAAACTG...AGGGGAGCCTTTGAAACCAGTTCTGCTTTTGCTAAGTACTGTATTTATGTCACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CAA 90 bp | AAGCTAACCCATAGAGCAGTTTTTCTTTCTCTTGGGCAAGCGATGTTTTCTGATTGGTGTTATCCAGTCTaGGAGCATTCTCAGAATAGA | + |
|
Preference number: 5 (lower is better) Translates to: KLTHRAVFLSLGQAMFSDWCYPV*EHSQNR Trigger: TCTATTCTGAGAATGCTCCAAGACTGGATAACACCA...ATCAGAAAACATCGCTTGCCCAAGAGAAAGAAAAACTGCTCTATGGGTTAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTTCTTTCTCTTGGGCAAGCGATGTTTTCTGATACTGCTCTAGGGTATAGTTGGTGTTATCCAGTCTaGGAGCATTCTCAGAATAGA | + |
|
Preference number: 5 (lower is better) Translates to: VFLSLGQAMFSDTALGYSWCYPV*EHSQNR Trigger: TCTATTCTGAGAATGCTCCAAGACTGGATAACACCA...ACTATACCCTAGAGCAGTATCAGAAAACATCGCTTGCCCAAGAGAAAGAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTAACCCATAGAGCAGTTTTTCTTTCTCTTGGGCAAGCGATGTTTTCTGATAGAGTGATTCCTCCTTaGTCTAACCTATTGTACACG | + |
|
Preference number: 5 (lower is better) Translates to: KLTHRAVFLSLGQAMFSDRVIPP*SNLLYT Trigger: CGTGTACAATAGGTTAGACAAAGGAGGAATCACTCT...ATCAGAAAACATCGCTTGCCCAAGAGAAAGAAAAACTGCTCTATGGGTTAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169240.2 |
||
| CDS-3UTR CAA 90 bp | TCACTCAGGAGTAAGGTGATACTGGGAAACAATGTGTTTTTCAAGGTAATAATTAATAACTGGGAAGCATaGCCCAAGGCTTCTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLRSKVILGNNVFFKVIINNWEA*PKASLS Trigger: GGACAGAGAAGCCTTGGGCAATGCTTCCCAGTTATT...AATTATTACCTTGAAAAACACATTGTTTCCCAGTATCACCTTACTCCTGAGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CAA 90 bp | TTCCTGAACAGTTTCCAATTACTTTCATTCTTCCCTATAAAAATCCATGGAGCGAGAGTGATTCCTCCTTaGTCTAACCTATTGTACACG | + |
|
Preference number: 5 (lower is better) Translates to: FLNSFQLLSFFPIKIHGARVIPP*SNLLYT Trigger: CGTGTACAATAGGTTAGACAAAGGAGGAATCACTCT...CGCTCCATGGATTTTTATAGGGAAGAATGAAAGTAATTGGAAACTGTTCAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS-3UTR CAA 90 bp | TTCCTGAACAGTTTCCAATTACTTTCATTCTTCCCTATAAAAATCCATGGAGCGATAATATTGGGGTCTTaGAGCATTTCCAGATACCTT | + |
|
Preference number: 5 (lower is better) Translates to: FLNSFQLLSFFPIKIHGAIILGS*SISRYL Trigger: AAGGTATCTGGAAATGCTCAAAGACCCCAATATTAT...CGCTCCATGGATTTTTATAGGGAAGAATGAAAGTAATTGGAAACTGTTCAGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS CCA 72 bp | GGCAGTGCTGGCTTCCGGAGGAGGTTGGGAAGGAGCTaGGGTTGTGTCCTGCTCACACGACCTGGTCAAACC | + |
|
Preference number: 6 (lower is better) Translates to: GSAGFRRRLGRS*GCVLLTRPGQT Trigger: GGTTTGACCAGGTCGTGTGAGCAGGACACAACCCCAGCTCCTTCCCAACCTCCTCCGGAAGCCAGCACTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS CAA 90 bp | GGAGGGCAGTGCTGGCTTCCGGAGGAGGTTGGGAAGGAGCTGGGGTaGTGTCCTGCTCACACGACCTGGTCAAACCCACAGAAAGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GGQCWLPEEVGKELG*CPAHTTWSNPQKVP Trigger: TGGGACTTTCTGTGGGTTTGACCAGGTCGTGTGAGCAGGACACAACCCCAGCTCCTTCCCAACCTCCTCCGGAAGCCAGCACTGCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS CAA 72 bp | ACCTGCTCCCCAGAGGGCCTCCTTAGCTCCGGCAGCTaGGTGATCTTGGTCTCCCTGATGTGGAGCCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: TCSPEGLLSSGS*VILVSLMWSHR Trigger: CCTATGGCTCCACATCAGGGAGACCAAGATCACCAAGCTGCCGGAGCTAAGGAGGCCCTCTGGGGAGCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS CAA 90 bp | ACCTGCTCCCCAGAGGGCCTCCTTAGCTCCGGCAGCTTGGTGATCTaGGTCTCCCTGATGTGGAGCCATAGGTCACGAGTGGGTTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TCSPEGLLSSGSLVI*VSLMWSHRSRVGLL Trigger: GAGCAAACCCACTCGTGACCTATGGCTCCACATCAGGGAGACCAAGATCACCAAGCTGCCGGAGCTAAGGAGGCCCTCTGGGGAGCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS GCA 72 bp | TCCGGAGGAGGTTGGGAAGGAGCTGGGGTTGTGTCCTaGTCACACGACCTGGTCAAACCCACAGAAAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SGGGWEGAGVVS*SHDLVKPTESP Trigger: GGGACTTTCTGTGGGTTTGACCAGGTCGTGTGAGCAGGACACAACCCCAGCTCCTTCCCAACCTCCTCCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS CCA 72 bp | ACTCCATGGTCAGCCGATAGACACTGTCCCCACTGGTaGCCGCAAGGTCTTCTGCAGCCTGGATCACCACGT | + |
|
Preference number: 6 (lower is better) Translates to: TPWSADRHCPHW*PQGLLQPGSPR Trigger: ACGTGGTGATCCAGGCTGCAGAAGACCTTGCGGCCACCAGTGGGGACAGTGTCTATCGGCTGACCATGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS CAA 72 bp | CCAGAGGGCCTCCTTAGCTCCGGCAGCTTGGTGATCTaGGTCTCCCTGATGTGGAGCCATAGGTCACGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PEGLLSSGSLVI*VSLMWSHRSRV Trigger: CACTCGTGACCTATGGCTCCACATCAGGGAGACCAAGATCACCAAGCTGCCGGAGCTAAGGAGGCCCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS CAA 90 bp | CGAATTGGTACCTGCTCCCCAGAGGGCCTCCTTAGCTCCGGCAGCTaGGTGATCTTGGTCTCCCTGATGTGGAGCCATAGGTCACGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RIGTCSPEGLLSSGS*VILVSLMWSHRSRV Trigger: CACTCGTGACCTATGGCTCCACATCAGGGAGACCAAGATCACCAAGCTGCCGGAGCTAAGGAGGCCCTCTGGGGAGCAGGTACCAATTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS TCA 72 bp | TTCAGCTGGCGTGGACACGGTGACGACCACTGGATGTaGAGACATCAGGGAGTCGTCCTCTTGCACGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: FSWRGHGDDHWM*RHQGVVLLHGE Trigger: TTCCCCGTGCAAGAGGACGACTCCCTGATGTCTTCACATCCAGTGGTCGTCACCGTGTCCACGCCAGCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029658.14 ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS GCA 72 bp | TGCTTCTTATACTCGAAGCACCGTCGAATTGGTACCTaGTCCCCAGAGGGCCTCCTTAGCTCCGGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CFLYSKHRRIGT*SPEGLLSSGSL Trigger: CAAGCTGCCGGAGCTAAGGAGGCCCTCTGGGGAGCAGGTACCAATTCGACGGTGCTTCGAGTATAAGAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS CAA 72 bp | TTCCCGAGCTCTGACGGTGGCTGCGAAGGATCAGCTTaGGAGTCCAACAGAAAGCGTTTCTGGGTGATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FPSSDGGCEGSA*ESNRKRFWVMF Trigger: GAACATCACCCAGAAACGCTTTCTGTTGGACTCCAAAGCTGATCCTTCGCAGCCACCGTCAGAGCTCGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170918.8 |
||
| CDS CAA 72 bp | CACAAGCAGCCTGAGGTTTACCGGAATACGTGTGGTTaGAGGAGAGAGCCTCGGCTATCCAATCCCACGTTC | + |
|
Preference number: 6 (lower is better) Translates to: HKQPEVYRNTCG*RREPRLSNPTF Trigger: GAACGTGGGATTGGATAGCCGAGGCTCTCTCCTCAAACCACACGTATTCCGGTAAACCTCAGGCTGCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169240.2 |
||
| CDS CCA 72 bp | GGGAAGGAGCTGGGGTTGTGTCCTGCTCACACGACCTaGTCAAACCCACAGAAAGTCCCACTATTAATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GKELGLCPAHTT*SNPQKVPLLIQ Trigger: TTGGATTAATAGTGGGACTTTCTGTGGGTTTGACCAGGTCGTGTGAGCAGGACACAACCCCAGCTCCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS CAA 72 bp | GTCTCCCTGATGTGGAGCCATAGGTCACGAGTGGGTTaGCTCAAGTTGACAGAGATGGTCACTATTCCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: VSLMWSHRSRVG*LKLTEMVTIPV Trigger: CACGGGAATAGTGACCATCTCTGTCAACTTGAGCAAACCCACTCGTGACCTATGGCTCCACATCAGGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS TCA 72 bp | TCCTCTTGCACGGGGAACACATCTTCAAGCAGCACCTaGCTGAGCATCTGCCAGTCTTTTTCTGCGTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSCTGNTSSSST*LSICQSFSAWF Trigger: AAACCACGCAGAAAAAGACTGGCAGATGCTCAGTCAGGTGCTGCTTGAAGATGTGTTCCCCGTGCAAGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS TCA 72 bp | CAAACACAGATGTTATTTCAGCTGGCGTGGACACGGTaGCGACCACTGGATGTGAAGACATCAGGGAGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: QTQMLFQLAWTR*RPLDVKTSGSR Trigger: ACGACTCCCTGATGTCTTCACATCCAGTGGTCGTCACCGTGTCCACGCCAGCTGAAATAACATCTGTGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029658.14 ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS CCA 72 bp | GTCACAGTATTTCCAAACCACTGGTGTACAAGTTCGTaGGCAACCACGCTGGCCACTCTCTGCTGGTTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: VTVFPNHWCTSS*ATTLATLCWLD Trigger: ATCTAACCAGCAGAGAGTGGCCAGCGTGGTTGCCCACGAACTTGTACACCAGTGGTTTGGAAATACTGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS TCA 72 bp | CAGAGTTCTGCATTCCATAGCGGTACACAAGCAGCCTaGGGTTTACCGGAATACGTGTGGTTTGAGGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QSSAFHSGTQAA*GLPEYVWFEER Trigger: TCTCTCCTCAAACCACACGTATTCCGGTAAACCTCAGGCTGCTTGTGTACCGCTATGGAATGCAGAACTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169240.2 |
||
| CDS CCA 72 bp | GAAGGATCAGCTTTGGAGTCCAACAGAAAGCGTTTCTaGGTGATGTTCTGCCTTCCACTCACAGTGACCACA | + |
|
Preference number: 6 (lower is better) Translates to: EGSALESNRKRF*VMFCLPLTVTT Trigger: TGTGGTCACTGTGAGTGGAAGGCAGAACATCACCCAGAAACGCTTTCTGTTGGACTCCAAAGCTGATCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029658.14 ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS CCA 72 bp | AATCCTAAGATAGAGGCCCGGAGTAACTTTGTGATGTaGCTTCCGGTATCCTGCCATCCCAGCAAATCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: NPKIEARSNFVM*LPVSCHPSKSA Trigger: TGCAGATTTGCTGGGATGGCAGGATACCGGAAGCCACATCACAAAGTTACTCCGGGCCTCTATCTTAGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS CAA 90 bp | TCAAATAACTGGGAAGCATTGCCCAAGGCTTCTCTGTCCCCCATCTaGCATGCGAATCCTAAGATAGAGGCCCGGAGTAACTTTGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SNNWEALPKASLSPI*HANPKIEARSNFVM Trigger: CATCACAAAGTTACTCCGGGCCTCTATCTTAGGATTCGCATGCAAGATGGGGGACAGAGAAGCCTTGGGCAATGCTTCCCAGTTATTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029658.14 |
||
| CDS CCA 72 bp | TGTCTCCTTCTGATTGGGCTGGACATAGACCTTGAGTaGTTTGCCGCTCCTGGATTTTCTCTCTATAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CLLLIGLDIDLE*FAAPGFSLYSS Trigger: ACTGCTATAGAGAGAAAATCCAGGAGCGGCAAACCACTCAAGGTCTATGTCCAGCCCAATCAGAAGGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS CAA 72 bp | CTAGTCCAGGTGTCCATCACTTCTTTCACTGGCAGATaGCTTGCCTCTTGCAGTGAATCCCAAAAGTCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LVQVSITSFTGR*LASCSESQKSE Trigger: TTCCGACTTTTGGGATTCACTGCAAGAGGCAAGCAATCTGCCAGTGAAAGAAGTGATGGACACCTGGACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029658.14 ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS CAA 72 bp | TCCAGGTGTCCATCACTTCTTTCACTGGCAGATTGCTaGCCTCTTGCAGTGAATCCCAAAAGTCGGAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SRCPSLLSLADC*PLAVNPKSRKF Trigger: AAACTTCCGACTTTTGGGATTCACTGCAAGAGGCAAGCAATCTGCCAGTGAAAGAAGTGATGGACACCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029658.14 ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS CAA 90 bp | CGCATACTCCATAGCGAAGTAGTCTTCGAAGTAATCAAATACAGCTaGGGTTATGTTTGCCGCATACTCTGCTGTCTCCTTCTGATTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RILHSEVVFEVIKYS*GYVCRILCCLLLIG Trigger: CCCAATCAGAAGGAGACAGCAGAGTATGCGGCAAACATAACCCAAGCTGTATTTGATTACTTCGAAGACTACTTCGCTATGGAGTATGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS TCA 72 bp | CACTTCTTTCACTGGCAGATTGCTTGCCTCTTGCAGTaGATCCCAAAAGTCGGAAGTTTTTGCATTCGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: HFFHWQIACLLQ*IPKVGSFCIRE Trigger: TTCGCGAATGCAAAAACTTCCGACTTTTGGGATTCACTGCAAGAGGCAAGCAATCTGCCAGTGAAAGAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029658.14 ENSMUST00000169240.2 ENSMUST00000170918.8 |
||
| CDS GCA 72 bp | ATCAAATACAGCTTGGGTTATGTTTGCCGCATACTCTaGTGTCTCCTTCTGATTGGGCTGGACATAGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: IKYSLGYVCRIL*CLLLIGLDIDL Trigger: AAGGTCTATGTCCAGCCCAATCAGAAGGAGACAGCAGAGTATGCGGCAAACATAACCCAAGCTGTATTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS CAA 72 bp | AGTCTTCGAAGTAATCAAATACAGCTTGGGTTATGTTaGCCGCATACTCTGCTGTCTCCTTCTGATTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLRSNQIQLGLC*PHTLLSPSDWA Trigger: AGCCCAATCAGAAGGAGACAGCAGAGTATGCGGCAAACATAACCCAAGCTGTATTTGATTACTTCGAAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS CAA 72 bp | CATAGCGAAGTAGTCTTCGAAGTAATCAAATACAGCTaGGGTTATGTTTGCCGCATACTCTGCTGTCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: HSEVVFEVIKYS*GYVCRILCCLL Trigger: AAGGAGACAGCAGAGTATGCGGCAAACATAACCCAAGCTGTATTTGATTACTTCGAAGACTACTTCGCTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000170918.8 |
||
| CDS CAA 72 bp | ACAGCCTTTTTGGAATTTCTCTGGTGTTATCCAGTCTaGGAGCATTCTCAGAATAGAAGCTCCCTTGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: TAFLEFLWCYPV*EHSQNRSSLAV Trigger: TACAGCAAGGGAGCTTCTATTCTGAGAATGCTCCAAGACTGGATAACACCAGAGAAATTCCAAAAAGGCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029658.14 ENSMUST00000169240.2 ENSMUST00000170918.8 |
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| CDS CAA 72 bp | TCTCCGCTAAGATTAGCATTCAGAGTGATTCCTCCTTaGTCTAACCTATTGTACACGGTGATCCTTGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SPLRLAFRVIPP*SNLLYTVILEL Trigger: CAACTCAAGGATCACCGTGTACAATAGGTTAGACAAAGGAGGAATCACTCTGAATGCTAATCTTAGCGGAGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029658.14 ENSMUST00000169240.2 |
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| CDS TCA 72 bp | TTGGAGCATTCTCAGAATAGAAGCTCCCTTGCTGTATaGTATCCCATCAAACACAGATGTTATTTCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LEHSQNRSSLAV*YPIKHRCYFSW Trigger: CCAGCTGAAATAACATCTGTGTTTGATGGGATATCATACAGCAAGGGAGCTTCTATTCTGAGAATGCTCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029658.14 ENSMUST00000169240.2 ENSMUST00000170918.8 |
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