Pregenerated sensors for ENKUR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026679Ensembl transcript IDs: ENSMUST00000027992.3
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGTGCAGCTTCTGACTTTAATGGTTTGTTTATAAGTAGAACTCTGACAGTGGAGCTATTCTTTCAACACTaGCCCTACATTTTCGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: GAASDFNGLFISRTLTVELFFQH*PYIFGE Trigger: TTCACCGAAAATGTAGGGGCAGTGTTGAAAGAATAG...CTCCACTGTCAGAGTTCTACTTATAAACAAACCATTAAAGTCAGAAGCTGCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| 3UTR-3UTR TCA 90 bp | TTGTTTATAAGTAGAACTCTGACAGTGGAGGAGAAAATTTTCTCTAGAGCAAGCCCCCTACATTTTCGGTaGAAACTTTATTCTCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LFISRTLTVEEKIFSRASPLHFR*KLYSLH Trigger: ATGAAGAGAATAAAGTTTTCACCGAAAATGTAGGGG...GCTTGCTCTAGAGAAAATTTTCTCCTCCACTGTCAGAGTTCTACTTATAAACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR GCA 90 bp | TTCATAGTCCTCTTTGAGAAGAGTGGGTTTAGTGTGATGGCCATGTGGCTTTTTGATGTATACCTAGGATaGTGGGGCGGCTCCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: FIVLFEKSGFSVMAMWLFDVYLG*WGGSFK Trigger: CTTGAAGGAGCCGCCCCAGCATCCTAGGTATACATC...AAAAAGCCACATGGCCATCACACTAAACCCACTCTTCTCAAAGAGGACTATGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR GCA 90 bp | CAAGGTGCAGCTTCTGACTTTAATGGTTTGTTTATAAGTAGAACTCTGACAGTGGGTTCTCAAGGGCACTaGAGGCTTCTTGGGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: QGAASDFNGLFISRTLTVGSQGH*RLLGRA Trigger: TGCTCTCCCAAGAAGCCTGCAGTGCCCTTGAGAACC...CACTGTCAGAGTTCTACTTATAAACAAACCATTAAAGTCAGAAGCTGCACCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR GCA 90 bp | TTGTTTATAAGTAGAACTCTGACAGTGGAGGAGAAAATTTTCTCTAGAGCAAGCCAGTCCCTGCAGAACTaGCTCCCTTTCTTCGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LFISRTLTVEEKIFSRASQSLQN*LPFFVR Trigger: TCTGACGAAGAAAGGGAGGCAGTTCTGCAGGGACTG...GCTTGCTCTAGAGAAAATTTTCTCCTCCACTGTCAGAGTTCTACTTATAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR CCA 90 bp | TTGTTTATAAGTAGAACTCTGACAGTGGAGGAGAAAATTTTCTCTAGAGCAAGCGTATACCTAGGATGCTaGGGCGGCTCCTTCAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: LFISRTLTVEEKIFSRASVYLGC*GGSFKS Trigger: TGACTTGAAGGAGCCGCCCCAGCATCCTAGGTATAC...GCTTGCTCTAGAGAAAATTTTCTCCTCCACTGTCAGAGTTCTACTTATAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR CCA 90 bp | TTCATAGTCCTCTTTGAGAAGAGTGGGTTTAGTGTGATGGCCATGTGGCTTTTTCTGTATTCCCATAACTaGATGATCGGTTCTCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: FIVLFEKSGFSVMAMWLFLYSHN*MIGSQG Trigger: CCCTTGAGAACCGATCATCCAGTTATGGGAATACAG...AAAAAGCCACATGGCCATCACACTAAACCCACTCTTCTCAAAGAGGACTATGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR CCA 90 bp | CAAGGTGCAGCTTCTGACTTTAATGGTTTGTTTATAAGTAGAACTCTGACAGTGCAACATAAATCGGCTTaGGCTTTTTGGCCACGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QGAASDFNGLFISRTLTVQHKSA*AFWPRP Trigger: TGGGCGTGGCCAAAAAGCCCAAGCCGATTTATGTTG...CACTGTCAGAGTTCTACTTATAAACAAACCATTAAAGTCAGAAGCTGCACCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR CCA 90 bp | GGTGCAGCTTCTGACTTTAATGGTTTGTTTATAAGTAGAACTCTGACAGTGGAGAAGACCGAGAGGGATTaGAACTCTTTGTGCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: GAASDFNGLFISRTLTVEKTERD*NSLCTS Trigger: AGAGGTGCACAAAGAGTTCCAATCCCTCTCGGTCTT...CTCCACTGTCAGAGTTCTACTTATAAACAAACCATTAAAGTCAGAAGCTGCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR TCA 90 bp | TTCATAGTCCTCTTTGAGAAGAGTGGGTTTAGTGTGATGGCCATGTGGCTTTTTTCAAGTCACTGGGTATaGGGTTATAAATACTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: FIVLFEKSGFSVMAMWLFSSHWV*GYKYSR Trigger: CCGAGAGTATTTATAACCTCATACCCAGTGACTTGA...AAAAAGCCACATGGCCATCACACTAAACCCACTCTTCTCAAAGAGGACTATGAA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR GCA 90 bp | GGTGCAGCTTCTGACTTTAATGGTTTGTTTATAAGTAGAACTCTGACAGTGGAGATGTCGTGTTCCAGCTaGTTCATCTCTTTTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GAASDFNGLFISRTLTVEMSCSS*FISFSS Trigger: GCTGGAAAAAGAGATGAAGCAGCTGGAACACGACAT...CTCCACTGTCAGAGTTCTACTTATAAACAAACCATTAAAGTCAGAAGCTGCACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR CCA 90 bp | TTCATAGTCCTCTTTGAGAAGAGTGGGTTTAGTGTGATGGCCATGTGGCTTTTTTCTTTAGAAAATCCTTaGGGGAAGGTATCTCTACTT | + |
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Preference number: 4 (lower is better) Translates to: FIVLFEKSGFSVMAMWLFSLENP*GKVSLL Trigger: AAGTAGAGATACCTTCCCCCAAGGATTTTCTAAAGA...AAAAAGCCACATGGCCATCACACTAAACCCACTCTTCTCAAAGAGGACTATGAA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR TCA 90 bp | TTTATAAGTAGAACTCTGACAGTGGAGGAGAAAATTTTCTCTAGAGCAAGCAAATTGGTACAGAATCAATaGAGACCGAGAGGGATTGGA | + |
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Preference number: 4 (lower is better) Translates to: FISRTLTVEEKIFSRASKLVQNQ*RPRGIG Trigger: TCCAATCCCTCTCGGTCTTCATTGATTCTGTACCAA...TTTGCTTGCTCTAGAGAAAATTTTCTCCTCCACTGTCAGAGTTCTACTTATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR CCA 90 bp | GGTGCAGCTTCTGACTTTAATGGTTTGTTTATAAGTAGAACTCTGACAGTGGAGCTTGCGAATCTTCTTTaGTACAGAATCAATGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: GAASDFNGLFISRTLTVELANLL*YRINED Trigger: GTCTTCATTGATTCTGTACCAAAGAAGATTCGCAAG...CTCCACTGTCAGAGTTCTACTTATAAACAAACCATTAAAGTCAGAAGCTGCACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR GCA 90 bp | TTGTTTATAAGTAGAACTCTGACAGTGGAGGAGAAAATTTTCTCTAGAGCAAGCCATGATGACGTCAGCTaGATTTGTGTTTATGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: LFISRTLTVEEKIFSRASHDDVS*ICVYEV Trigger: AACTTCATAAACACAAATGCAGCTGACGTCATCATG...GCTTGCTCTAGAGAAAATTTTCTCCTCCACTGTCAGAGTTCTACTTATAAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR GCA 90 bp | TTTATAAGTAGAACTCTGACAGTGGAGGAGAAAATTTTCTCTAGAGCAAGCAAATCTTTTTCCAGCTTCTaGTTGCGAATCTTCTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: FISRTLTVEEKIFSRASKSFSSF*LRIFFG Trigger: ACCAAAGAAGATTCGCAAGCAGAAGCTGGAAAAAGA...TTTGCTTGCTCTAGAGAAAATTTTCTCCTCCACTGTCAGAGTTCTACTTATAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR GCA 90 bp | TTTATAAGTAGAACTCTGACAGTGGAGGAGAAAATTTTCTCTAGAGCAAGCAAAGTCATACTCTTCTTGTaGTTTCTTCACATCCTCATT | + |
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Preference number: 4 (lower is better) Translates to: FISRTLTVEEKIFSRASKVILFL*FLHILI Trigger: AATGAGGATGTGAAGAAAGCACAAGAAGAGTATGAC...TTTGCTTGCTCTAGAGAAAATTTTCTCCTCCACTGTCAGAGTTCTACTTATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS TCA 90 bp | CTGCCTCCCTTTCTTCGTCAGAGAGTCTCTTCATGGCCGCTTTCTTaGGGTTCTCCTGGATGTAATTGTCATACTCTTCTTGTGCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: LPPFLRQRVSSWPLS*GSPGCNCHTLLVLS Trigger: AGAAAGCACAAGAAGAGTATGACAATTACATCCAGGAGAACCTCAAGAAAGCGGCCATGAAGAGACTCTCTGACGAAGAAAGGGAGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS CCA 90 bp | TTGCGAATCTTCTTTGGTACAGAATCAATGAAGACCGAGAGGGATTaGAACTCTTTGTGCACCTCTTCCCAGTTCTTCTTCAGTCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: LRIFFGTESMKTERD*NSLCTSSQFFFSPC Trigger: GCAGGGACTGAAGAAGAACTGGGAAGAGGTGCACAAAGAGTTCCAATCCCTCTCGGTCTTCATTGATTCTGTACCAAAGAAGATTCGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS TCA 90 bp | CTTTTTCCAGCTTCTGCTTGCGAATCTTCTTTGGTACAGAATCAATaGAGACCGAGAGGGATTGGAACTCTTTGTGCACCTCTTCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: LFPASACESSLVQNQ*RPRGIGTLCAPLPS Trigger: ACTGGGAAGAGGTGCACAAAGAGTTCCAATCCCTCTCGGTCTTCATTGATTCTGTACCAAAGAAGATTCGCAAGCAGAAGCTGGAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR CAA 90 bp | GGTGCAGCTTCTGACTTTAATGGTTTGTTTATAAGTAGAACTCTGACAGTGGAGGGCACTGCAGGCTTCTaGGGAGAGCACCTATTAAAC | + |
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Preference number: 5 (lower is better) Translates to: GAASDFNGLFISRTLTVEGTAGF*GEHLLN Trigger: GTTTAATAGGTGCTCTCCCAAGAAGCCTGCAGTGCC...CTCCACTGTCAGAGTTCTACTTATAAACAAACCATTAAAGTCAGAAGCTGCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR CAA 90 bp | CAAGGTGCAGCTTCTGACTTTAATGGTTTGTTTATAAGTAGAACTCTGACAGTGGAAGACCGAGAGGGATaGGAACTCTTTGTGCACCTC | + |
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Preference number: 5 (lower is better) Translates to: QGAASDFNGLFISRTLTVEDREG*ELFVHL Trigger: GAGGTGCACAAAGAGTTCCAATCCCTCTCGGTCTTC...CACTGTCAGAGTTCTACTTATAAACAAACCATTAAAGTCAGAAGCTGCACCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR CAA 90 bp | CAAGGTGCAGCTTCTGACTTTAATGGTTTGTTTATAAGTAGAACTCTGACAGTGAGGGATTGGAACTCTTaGTGCACCTCTTCCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: QGAASDFNGLFISRTLTVRDWNS*CTSSQF Trigger: GAACTGGGAAGAGGTGCACAAAGAGTTCCAATCCCT...CACTGTCAGAGTTCTACTTATAAACAAACCATTAAAGTCAGAAGCTGCACCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR CAA 90 bp | CAAGGTGCAGCTTCTGACTTTAATGGTTTGTTTATAAGTAGAACTCTGACAGTGACATCCTCATTTCGCTaGCATATGTACTCAGGCGTG | + |
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Preference number: 5 (lower is better) Translates to: QGAASDFNGLFISRTLTVTSSFR*HMYSGV Trigger: CACGCCTGAGTACATATGCAAGCGAAATGAGGATGT...CACTGTCAGAGTTCTACTTATAAACAAACCATTAAAGTCAGAAGCTGCACCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR CAA 90 bp | GGTGCAGCTTCTGACTTTAATGGTTTGTTTATAAGTAGAACTCTGACAGTGGAGTTTTCCAGCTTCTGCTaGCGAATCTTCTTTGGTACA | + |
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Preference number: 5 (lower is better) Translates to: GAASDFNGLFISRTLTVEFSSFC*RIFFGT Trigger: TGTACCAAAGAAGATTCGCAAGCAGAAGCTGGAAAA...CTCCACTGTCAGAGTTCTACTTATAAACAAACCATTAAAGTCAGAAGCTGCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS-3UTR CAA 90 bp | CAAGGTGCAGCTTCTGACTTTAATGGTTTGTTTATAAGTAGAACTCTGACAGTGATTGTCATACTCTTCTaGTGCTTTCTTCACATCCTC | + |
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Preference number: 5 (lower is better) Translates to: QGAASDFNGLFISRTLTVIVILF*CFLHIL Trigger: GAGGATGTGAAGAAAGCACAAGAAGAGTATGACAAT...CACTGTCAGAGTTCTACTTATAAACAAACCATTAAAGTCAGAAGCTGCACCTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS CAA 90 bp | CTTGCGAATCTTCTTTGGTACAGAATCAATGAAGACCGAGAGGGATaGGAACTCTTTGTGCACCTCTTCCCAGTTCTTCTTCAGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LANLLWYRINEDREG*ELFVHLFPVLLQSL Trigger: CAGGGACTGAAGAAGAACTGGGAAGAGGTGCACAAAGAGTTCCAATCCCTCTCGGTCTTCATTGATTCTGTACCAAAGAAGATTCGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS GCA 72 bp | TTTATAGTTGCTCTAAACAGTGATGTATACCTAGGATaGTGGGGCGGCTCCTTCAAGTCACTGGGTATGAGG | + |
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Preference number: 6 (lower is better) Translates to: FIVALNSDVYLG*WGGSFKSLGMR Trigger: CCTCATACCCAGTGACTTGAAGGAGCCGCCCCAGCATCCTAGGTATACATCACTGTTTAGAGCAACTATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS CCA 72 bp | ATAGTTGCTCTAAACAGTGATGTATACCTAGGATGCTaGGGCGGCTCCTTCAAGTCACTGGGTATGAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: IVALNSDVYLGC*GGSFKSLGMRL Trigger: TAACCTCATACCCAGTGACTTGAAGGAGCCGCCCCAGCATCCTAGGTATACATCACTGTTTAGAGCAACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS TCA 72 bp | TTTCTTCGTCAGAGAGTCTCTTCATGGCCGCTTTCTTaGGGTTCTCCTGGATGTAATTGTCATACTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FLRQRVSSWPLS*GSPGCNCHTLL Trigger: AAGAAGAGTATGACAATTACATCCAGGAGAACCTCAAGAAAGCGGCCATGAAGAGACTCTCTGACGAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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| CDS CAA 72 bp | CTTGAGGTTCTCCTGGATGTAATTGTCATACTCTTCTaGTGCTTTCTTCACATCCTCATTTCGCTTGCATAT | + |
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Preference number: 6 (lower is better) Translates to: LEVLLDVIVILF*CFLHILISLAY Trigger: ATATGCAAGCGAAATGAGGATGTGAAGAAAGCACAAGAAGAGTATGACAATTACATCCAGGAGAACCTCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027992.3 |
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