Pregenerated sensors for ENKD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013155Ensembl transcript IDs: ENSMUST00000013299.11, ENSMUST00000212061.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGAGTGTGTGGCCCGGGGGCATGGACGGGTCTGGCTGGCTACGCTaGCGAGCTTCCGCTTCCTTCCGCCACAGGTCCCTGCGTTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: MSVWPGGMDGSGWLR*RASASFRHRSLRSN Trigger: GTTGGAACGCAGGGACCTGTGGCGGAAGGAAGCGGAAGCTCGCCAGCGTAGCCAGCCAGACCCGTCCATGCCCCCGGGCCACACACTCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR CCA 90 bp | TTCTCAGGCATGAGTGTGTGGCCCGGGGGCATGGACGGGTCTGGCTaGCTACGCTGGCGAGCTTCCGCTTCCTTCCGCCACAGGTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: FSGMSVWPGGMDGSG*LRWRASASFRHRSL Trigger: CAGGGACCTGTGGCGGAAGGAAGCGGAAGCTCGCCAGCGTAGCCAGCCAGACCCGTCCATGCCCCCGGGCCACACACTCATGCCTGAGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR CCA 90 bp | CTGATTCTCAGGCATGAGTGTGTGGCCCGGGGGCATGGACGGGTCTaGCTGGCTACGCTGGCGAGCTTCCGCTTCCTTCCGCCACAGGTC | + |
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Preference number: 1 (lower is better) Translates to: LILRHECVARGHGRV*LATLASFRFLPPQV Trigger: GACCTGTGGCGGAAGGAAGCGGAAGCTCGCCAGCGTAGCCAGCCAGACCCGTCCATGCCCCCGGGCCACACACTCATGCCTGAGAATCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR CCA 90 bp | AGGCCGGGTCCCTGCAGAGACATGGCAAGCACGGTGGAGACCCCGTaGCACTACATTGCACCTCTGTACCGACTCTACCCGCGGGACTCC | + |
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Preference number: 1 (lower is better) Translates to: RPGPCRDMASTVETP*HYIAPLYRLYPRDS Trigger: GGAGTCCCGCGGGTAGAGTCGGTACAGAGGTGCAATGTAGTGCCACGGGGTCTCCACCGTGCTTGCCATGTCTCTGCAGGGACCCGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR TCA 90 bp | TTTGTAGCAGATTGTTCAGGGTCTCCAGCCGCTGATTCTCAGGCATaGGTGTGTGGCCCGGGGGCATGGACGGGTCTGGCTGGCTACGCT | + |
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Preference number: 1 (lower is better) Translates to: FVADCSGSPAADSQA*VCGPGAWTGLAGYA Trigger: AGCGTAGCCAGCCAGACCCGTCCATGCCCCCGGGCCACACACTCATGCCTGAGAATCAGCGGCTGGAGACCCTGAACAATCTGCTACAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR TCA 90 bp | AGCTGGCTCTGGCTTTGTAGCAGATTGTTCAGGGTCTCCAGCCGCTaGTTCTCAGGCATGAGTGTGTGGCCCGGGGGCATGGACGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: SWLWLCSRLFRVSSR*FSGMSVWPGGMDGS Trigger: AGACCCGTCCATGCCCCCGGGCCACACACTCATGCCTGAGAATCAGCGGCTGGAGACCCTGAACAATCTGCTACAAAGCCAGAGCCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR GCA 90 bp | GCTAGGGCGTTGCGACTAATGAAATCCACGCCTAGGCCGGGTCCCTaGAGAGACATGGCAAGCACGGTGGAGACCCCGTGGCACTACATT | + |
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Preference number: 1 (lower is better) Translates to: ARALRLMKSTPRPGP*RDMASTVETPWHYI Trigger: AATGTAGTGCCACGGGGTCTCCACCGTGCTTGCCATGTCTCTGCAGGGACCCGGCCTAGGCGTGGATTTCATTAGTCGCAACGCCCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR CCA 90 bp | GGTCCCTGCGTTCCAACAAGTAATGGGGCACATGGCCTTTCTGCGTaGCGTTGTAGCGCTCCTGGGCTTGGCGCTGCTGTTCCTGAACCT | + |
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Preference number: 1 (lower is better) Translates to: GPCVPTSNGAHGLSA*RCSAPGLGAAVPEP Trigger: AGGTTCAGGAACAGCAGCGCCAAGCCCAGGAGCGCTACAACGCCACGCAGAAAGGCCATGTGCCCCATTACTTGTTGGAACGCAGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR TCA 90 bp | TTGACAGAGAAGTTGGGAGGCTGGTGGCCCTTCTGCAGCCCCTGGTaGCTAAGAAGTGCTTTCGATTCTGCCCACCCCAACGCTCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: LTEKLGGWWPFCSPW*LRSAFDSAHPNAPV Trigger: GACAGGAGCGTTGGGGTGGGCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCTCCCAACTTCTCTGTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| 3UTR TCA 90 bp | ATTCTGCCCACCCCAACGCTCCTGTCTTTGAGCTATGACAGGGCTTaGGTCTGCCCTTGGCAGCCACGTGGTGATCCGCACACATATCTC | + |
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Preference number: 1 (lower is better) Translates to: ILPTPTLLSLSYDRA*VCPWQPRGDPHTYL Trigger: GAGATATGTGTGCGGATCACCACGTGGCTGCCAAGGGCAGACTCAAGCCCTGTCATAGCTCAAAGACAGGAGCGTTGGGGTGGGCAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| 3UTR TCA 90 bp | ATAGCCTCTTCTATTTGCACCAACTTCCGGTCCAGTTCAGCACGATaGCCCTGGGCTCTCAGCGAGTCTGCCCCAGCAGGTAATAGTACT | + |
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Preference number: 1 (lower is better) Translates to: IASSICTNFRSSSAR*PWALSESAPAGNST Trigger: AGTACTATTACCTGCTGGGGCAGACTCGCTGAGAGCCCAGGGTCATCGTGCTGAACTGGACCGGAAGTTGGTGCAAATAGAAGAGGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGCATGGACGGGTCTGGCTGGCTACGCTGGCGAGCTTCCGCTTCCTTCCGCGTCCCTGCAGAGACATaGCAAGCACGGTGGAGACCC | + |
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Preference number: 2 (lower is better) Translates to: GGMDGSGWLRWRASASFRVPAET*QARWRP Trigger: GGGTCTCCACCGTGCTTGCCATGTCTCTGCAGGGAC...GCGGAAGGAAGCGGAAGCTCGCCAGCGTAGCCAGCCAGACCCGTCCATGCCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGCTACGCTGGCGAGCTTCCGCTTCCTTCCGCCACAGGTCCCTGCGTTCCCTGTTCCTGAACCTGTaGAAGGACCTGCAGGGAGCG | + |
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Preference number: 2 (lower is better) Translates to: GWLRWRASASFRHRSLRSLFLNL*KDLQGA Trigger: CGCTCCCTGCAGGTCCTTGCACAGGTTCAGGAACAG...GGAACGCAGGGACCTGTGGCGGAAGGAAGCGGAAGCTCGCCAGCGTAGCCAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGGGCACATGGCCTTTCTGCGTGGCGTTGTAGCGCTCCTGGGCTTGGCGCTGGAGAAGTTGGGAGGCTaGTGGCCCTTCTGCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: MGHMAFLRGVVALLGLALEKLGG*WPFCSP Trigger: GGGGCTGCAGAAGGGCCACCAGCCTCCCAACTTCTC...CAGCGCCAAGCCCAGGAGCGCTACAACGCCACGCAGAAAGGCCATGTGCCCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR CAA 90 bp | ATGGGGCACATGGCCTTTCTGCGTGGCGTTGTAGCGCTCCTGGGCTaGGCGCTGCTGTTCCTGAACCTGTGCAAGGACCTGCAGGGAGCG | + |
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Preference number: 2 (lower is better) Translates to: MGHMAFLRGVVALLG*ALLFLNLCKDLQGA Trigger: CGCTCCCTGCAGGTCCTTGCACAGGTTCAGGAACAGCAGCGCCAAGCCCAGGAGCGCTACAACGCCACGCAGAAAGGCCATGTGCCCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCGAGCTTCCGCTTCCTTCCGCCACAGGTCCCTGCGTTCCAACAAGTAATTTGGCAGCCACGTGGTaGTCCGCACACATATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: AGELPLPSATGPCVPTSNLAATW*SAHISP Trigger: GGGAGATATGTGTGCGGATCACCACGTGGCTGCCAA...ATTACTTGTTGGAACGCAGGGACCTGTGGCGGAAGGAAGCGGAAGCTCGCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTGCCCACCCCAACGCTTGGCAGCCACGTGGTaGTCCGCACACATATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LLQPLVTKKCFRFCPPQRLAATW*SAHISP Trigger: GGGAGATATGTGTGCGGATCACCACGTGGCTGCCAA...GCGTTGGGGTGGGCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTCCCTGCGTTCCAACAAGTAATGGGGCACATGGCCTTTCTGCGTGGCGTACATGGCAAGCACGGTaGAGACCCCGTGGCACTACA | + |
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Preference number: 2 (lower is better) Translates to: TGPCVPTSNGAHGLSAWRTWQAR*RPRGTT Trigger: TGTAGTGCCACGGGGTCTCCACCGTGCTTGCCATGT...ACGCCACGCAGAAAGGCCATGTGCCCCATTACTTGTTGGAACGCAGGGACCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTGCCCACCCCAACGCCCCTGTTACTCTTGGTaGGTACCAAGCGGGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LLQPLVTKKCFRFCPPQRPCYSW*VPSGEG Trigger: TCCTTCCCCGCTTGGTACCCACCAAGAGTAACAGGG...GCGTTGGGGTGGGCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTATTTGCACCAACTTCCGGTCCAGTTCAGCACGATGACCCTGGGCTCTCAGAGCTCACGTAGCAGCTaGCTCTGGCTTTGTAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: FYLHQLPVQFSTMTLGSQSSRSS*LWLCSR Trigger: TCTGCTACAAAGCCAGAGCCAGCTGCTACGTGAGCT...CTGAGAGCCCAGGGTCATCGTGCTGAACTGGACCGGAAGTTGGTGCAAATAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR-3UTR TCA 90 bp | GGACTAGGTATCCATCTTCACAAAGACTTTGGGTCGGGAAAAGATCTTGATAGCGCTGATTCTCAGGCATaGGTGTGTGGCCCGGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: GLGIHLHKDFGSGKDLDSADSQA*VCGPGA Trigger: TGCCCCCGGGCCACACACTCATGCCTGAGAATCAGC...GCTATCAAGATCTTTTCCCGACCCAAAGTCTTTGTGAAGATGGATACCTAGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR CAA 90 bp | CACAAAGACTTTGGGTCGGGAAAAGATCTTGATAGCCTCTTCTATTaGCACCAACTTCCGGTCCAGTTCAGCACGATGACCCTGGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: HKDFGSGKDLDSLFY*HQLPVQFSTMTLGS Trigger: AGAGCCCAGGGTCATCGTGCTGAACTGGACCGGAAGTTGGTGCAAATAGAAGAGGCTATCAAGATCTTTTCCCGACCCAAAGTCTTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR-3UTR CCA 90 bp | CGGGAAAAGATCTTGATAGCCTCTTCTATTTGCACCAACTTCCGGTCCAGTTCACCCTGTTACTCTTGGTaGGTACCAAGCGGGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: REKILIASSICTNFRSSSPCYSW*VPSGEG Trigger: TCCTTCCCCGCTTGGTACCCACCAAGAGTAACAGGG...TGAACTGGACCGGAAGTTGGTGCAAATAGAAGAGGCTATCAAGATCTTTTCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCGGGAAAAGATCTTGATAGCCTCTTCTATTTGCACCAACTTCCGGTCCAGTTTCTGCAGCCCCTGGTaGCTAAGAAGTGCTTTCGAT | + |
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Preference number: 2 (lower is better) Translates to: GREKILIASSICTNFRSSFCSPW*LRSAFD Trigger: ATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAA...ACTGGACCGGAAGTTGGTGCAAATAGAAGAGGCTATCAAGATCTTTTCCCGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR-3UTR TCA 90 bp | CACAAAGACTTTGGGTCGGGAAAAGATCTTGATAGCCTCTTCTATTTGCACCAAAGGGTCTCCAGCCGCTaGTTCTCAGGCATGAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: HKDFGSGKDLDSLFYLHQRVSSR*FSGMSV Trigger: CACACTCATGCCTGAGAATCAGCGGCTGGAGACCCT...TTGGTGCAAATAGAAGAGGCTATCAAGATCTTTTCCCGACCCAAAGTCTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR CCA 72 bp | TGGCCCGGGGGCATGGACGGGTCTGGCTGGCTACGCTaGCGAGCTTCCGCTTCCTTCCGCCACAGGTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: WPGGMDGSGWLR*RASASFRHRSL Trigger: CAGGGACCTGTGGCGGAAGGAAGCGGAAGCTCGCCAGCGTAGCCAGCCAGACCCGTCCATGCCCCCGGGCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR CCA 72 bp | AGGCATGAGTGTGTGGCCCGGGGGCATGGACGGGTCTaGCTGGCTACGCTGGCGAGCTTCCGCTTCCTTCCG | + |
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Preference number: 3 (lower is better) Translates to: RHECVARGHGRV*LATLASFRFLP Trigger: CGGAAGGAAGCGGAAGCTCGCCAGCGTAGCCAGCCAGACCCGTCCATGCCCCCGGGCCACACACTCATGCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR TCA 72 bp | GATTGTTCAGGGTCTCCAGCCGCTGATTCTCAGGCATaGGTGTGTGGCCCGGGGGCATGGACGGGTCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: DCSGSPAADSQA*VCGPGAWTGLA Trigger: AGCCAGACCCGTCCATGCCCCCGGGCCACACACTCATGCCTGAGAATCAGCGGCTGGAGACCCTGAACAATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR CCA 72 bp | CCCTGCAGAGACATGGCAAGCACGGTGGAGACCCCGTaGCACTACATTGCACCTCTGTACCGACTCTACCCG | + |
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Preference number: 3 (lower is better) Translates to: PCRDMASTVETP*HYIAPLYRLYP Trigger: CGGGTAGAGTCGGTACAGAGGTGCAATGTAGTGCCACGGGGTCTCCACCGTGCTTGCCATGTCTCTGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR GCA 72 bp | GCTGGCGAGCTTCCGCTTCCTTCCGCCACAGGTCCCTaGGTTCCAACAAGTAATGGGGCACATGGCCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: AGELPLPSATGP*VPTSNGAHGLS Trigger: AGAAAGGCCATGTGCCCCATTACTTGTTGGAACGCAGGGACCTGTGGCGGAAGGAAGCGGAAGCTCGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCAGGGTCTCCAGCCGCTGATTCTCAGGCATGAGTGTGTGGCCCGGGGGCATTTGGCAGCTAGGGCGTaGCGACTAATGAAATCCACG | + |
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Preference number: 3 (lower is better) Translates to: VQGLQPLILRHECVARGHLAARA*RLMKST Trigger: CGTGGATTTCATTAGTCGCAACGCCCTAGCTGCCAA...ATGCCCCCGGGCCACACACTCATGCCTGAGAATCAGCGGCTGGAGACCCTGAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCTGCCCCAGCAGGTAATAGTACTAGCTCACGTAGCAGCTGGCTCTGGCTTTGTAGCGCTCCTGGGCTaGGCGCTGCTGTTCCTGAAC | + |
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Preference number: 3 (lower is better) Translates to: SLPQQVIVLAHVAAGSGFVALLG*ALLFLN Trigger: GTTCAGGAACAGCAGCGCCAAGCCCAGGAGCGCTAC...AAAGCCAGAGCCAGCTGCTACGTGAGCTAGTACTATTACCTGCTGGGGCAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR TCA 72 bp | TGGCTTTGTAGCAGATTGTTCAGGGTCTCCAGCCGCTaGTTCTCAGGCATGAGTGTGTGGCCCGGGGGCATG | + |
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Preference number: 3 (lower is better) Translates to: WLCSRLFRVSSR*FSGMSVWPGGM Trigger: CATGCCCCCGGGCCACACACTCATGCCTGAGAATCAGCGGCTGGAGACCCTGAACAATCTGCTACAAAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR TCA 72 bp | TCTATTTGCACCAACTTCCGGTCCAGTTCAGCACGATaGCCCTGGGCTCTCAGCGAGTCTGCCCCAGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: SICTNFRSSSAR*PWALSESAPAG Trigger: ACCTGCTGGGGCAGACTCGCTGAGAGCCCAGGGTCATCGTGCTGAACTGGACCGGAAGTTGGTGCAAATAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR GCA 72 bp | CTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTaGTTTCGATTCTGCCCACCCCAACGCTCCTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: LVALLQPLVTKK*FRFCPPQRSCL Trigger: AAGACAGGAGCGTTGGGGTGGGCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| 3UTR CCA 72 bp | GTTCCAACAAGTAATGGGGCACATGGCCTTTCTGCGTaGCGTTGTAGCGCTCCTGGGCTTGGCGCTGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: VPTSNGAHGLSA*RCSAPGLGAAV Trigger: AACAGCAGCGCCAAGCCCAGGAGCGCTACAACGCCACGCAGAAAGGCCATGTGCCCCATTACTTGTTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR CCA 72 bp | GCAGGTAATAGTACTAGCTCACGTAGCAGCTGGCTCTaGCTTTGTAGCAGATTGTTCAGGGTCTCCAGCCGC | + |
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Preference number: 3 (lower is better) Translates to: AGNSTSSRSSWL*LCSRLFRVSSR Trigger: GCGGCTGGAGACCCTGAACAATCTGCTACAAAGCCAGAGCCAGCTGCTACGTGAGCTAGTACTATTACCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR-3UTR CAA 90 bp | GGTACCAAGCGGGGAAGGACTAGGTATCCATCTTCACAAAGACTTTGGGTCGGGATTTTGACAGAGAAGTaGGGAGGCTGGTGGCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: GTKRGRTRYPSSQRLWVGILTEK*GGWWPF Trigger: GAAGGGCCACCAGCCTCCCAACTTCTCTGTCAAAAT...CCCGACCCAAAGTCTTTGTGAAGATGGATACCTAGTCCTTCCCCGCTTGGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR-3UTR CAA 90 bp | ACGCTGGCGAGCTTCCGCTTCCTTCCGCCACAGGTCCCTGCGTTCCAACAAGTAACAAAAGGTTTAATTTaGACAGAGAAGTTGGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: TLASFRFLPPQVPAFQQVTKGLI*TEKLGG Trigger: GCCTCCCAACTTCTCTGTCAAAATTAAACCTTTTGT...TACTTGTTGGAACGCAGGGACCTGTGGCGGAAGGAAGCGGAAGCTCGCCAGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| CDS-3UTR GCA 90 bp | CGGGGGCATGGACGGGTCTGGCTGGCTACGCTGGCGAGCTTCCGCTTCCTTCCGCCGAACCGAGGGAGATaGACCCCAGTTGCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RGHGRVWLATLASFRFLPPNRGR*TPVAAA Trigger: TGCTGCTGCAACTGGGGTGCATCTCCCTCGGTTCGG...CGGAAGGAAGCGGAAGCTCGCCAGCGTAGCCAGCCAGACCCGTCCATGCCCCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| CDS-3UTR TCA 90 bp | AGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTGCCCTGGAAGGGCGAGCTaGGGACTGGAGGCACGGGAT | + |
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Preference number: 4 (lower is better) Translates to: RLVALLQPLVTKKCFRFCPGRAS*GLEARD Trigger: ATCCCGTGCCTCCAGTCCTCAGCTCGCCCTTCCAGG...GCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| CDS-3UTR TCA 90 bp | GGGAGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCGCTGATTCTCAGGCATaGGTGTGTGGCCCGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GRLVALLQPLVTKKCFRFADSQA*VCGPGA Trigger: TGCCCCCGGGCCACACACTCATGCCTGAGAATCAGC...GAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013299.11 |
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| CDS-3UTR GCA 90 bp | CTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTGCCCACCCCAACGCGCCACAGCGGGAGTGTaGCCGCAGAAAGTGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LLQPLVTKKCFRFCPPQRATAGV*PQKVGR Trigger: CCTGCCCACTTTCTGCGGGCACACTCCCGCTGTGGC...GCGTTGGGGTGGGCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| CDS-3UTR CCA 90 bp | AGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTGCCCGGGTCCCTTAGCTTaGGGACCTGGAAGGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: RLVALLQPLVTKKCFRFCPGPLA*GPGRAS Trigger: GCTCGCCCTTCCAGGTCCCCAAGCTAAGGGACCCGG...GCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013299.11 |
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| CDS-3UTR CCA 90 bp | GGGAGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCGCAGAGAGTGGGGTCTaGGGGGATGGGTCCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: GRLVALLQPLVTKKCFRFAESGV*GDGSRD Trigger: ATCTCTGGACCCATCCCCCCAGACCCCACTCTCTGC...GAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| CDS-3UTR CCA 90 bp | ACGCTGGCGAGCTTCCGCTTCCTTCCGCCACAGGTCCCTGCGTTCCAACAAGTACTTAGCTTGGGGACCTaGAAGGGCGAGCTGAGGACT | + |
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Preference number: 4 (lower is better) Translates to: TLASFRFLPPQVPAFQQVLSLGT*KGELRT Trigger: AGTCCTCAGCTCGCCCTTCCAGGTCCCCAAGCTAAG...TACTTGTTGGAACGCAGGGACCTGTGGCGGAAGGAAGCGGAAGCTCGCCAGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| CDS-3UTR TCA 90 bp | AGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTGCTTCAGTGGCTTAGGCTaGCCCTGTTCCCGGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RLVALLQPLVTKKCFRFCFSGLG*PCSRLR Trigger: ACGCAGCCGGGAACAGGGTCAGCCTAAGCCACTGAA...GCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCAGGGTCTCCAGCCGCTaGTTCTCAGGCATGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRLVALLQPLVTKKCFRFRVSSR*FSGMSV Trigger: CACACTCATGCCTGAGAATCAGCGGCTGGAGACCCT...GAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013299.11 |
||
| CDS-3UTR TCA 90 bp | CTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTGCCCACCCCAACGCTCCAGTTCAGCACGATaGCCCTGGGCTCTCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLQPLVTKKCFRFCPPQRSSSAR*PWALSE Trigger: CTCGCTGAGAGCCCAGGGTCATCGTGCTGAACTGGA...GCGTTGGGGTGGGCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013299.11 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTGCCCGAACCGAGGGAGATaGACCCCAGTTGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLVALLQPLVTKKCFRFCPNRGR*TPVAAA Trigger: TGCTGCTGCAACTGGGGTGCATCTCCCTCGGTTCGG...GCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS-3UTR GCA 90 bp | AGTCTGCCCCAGCAGGTAATAGTACTAGCTCACGTAGCAGCTGGCTCTGGCTTTGCCACAGCGGGAGTGTaGCCGCAGAAAGTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPQQVIVLAHVAAGSGFATAGV*PQKVGR Trigger: CCTGCCCACTTTCTGCGGGCACACTCCCGCTGTGGC...AAAGCCAGAGCCAGCTGCTACGTGAGCTAGTACTATTACCTGCTGGGGCAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCCTTAGCTTGGGGACCTaGAAGGGCGAGCTGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GRLVALLQPLVTKKCFRFLSLGT*KGELRT Trigger: AGTCCTCAGCTCGCCCTTCCAGGTCCCCAAGCTAAG...GAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTGCCTGTTCCTGAACCTGTaGAAGGACCTGCAGGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RLVALLQPLVTKKCFRFCLFLNL*KDLQGA Trigger: CGCTCCCTGCAGGTCCTTGCACAGGTTCAGGAACAG...GCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013299.11 |
||
| CDS-3UTR GCA 90 bp | GGGAGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTCCGCCACAGGTCCCTaGGTTCCAACAAGTAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRLVALLQPLVTKKCFRFSATGP*VPTSNG Trigger: CCCATTACTTGTTGGAACGCAGGGACCTGTGGCGGA...GAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013299.11 |
||
| CDS-3UTR CCA 90 bp | GGGAGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCGTTCTGTCACAGAGGTaGGGCCAAGCTCCTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GRLVALLQPLVTKKCFRFVLSQR*GQAPSS Trigger: GGATGAAGGAGCTTGGCCCCACCTCTGTGACAGAAC...GAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTGCCCCAGCAGGTAATAGTACTAGCTCACGTAGCAGCTGGCTCTGGCTTTGCAGAGAGTGGGGTCTaGGGGGATGGGTCCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLPQQVIVLAHVAAGSGFAESGV*GDGSRD Trigger: ATCTCTGGACCCATCCCCCCAGACCCCACTCTCTGC...AAAGCCAGAGCCAGCTGCTACGTGAGCTAGTACTATTACCTGCTGGGGCAGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTGCCCACCCCAACGCTGTGCCCGCAGAAAGTaGGCAGGTTCTGTCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLQPLVTKKCFRFCPPQRCARRK*AGSVTE Trigger: CTCTGTGACAGAACCTGCCCACTTTCTGCGGGCACA...GCGTTGGGGTGGGCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGGCTTTGTAGCAGATTGTTCAGGGTCTCCAGCCGCTGATTCTCAGGCATCTCTCACCTTAGCTTaGGGACCTGGAAGGGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSGFVADCSGSPAADSQASLTLA*GPGRAS Trigger: GCTCGCCCTTCCAGGTCCCCAAGCTAAGGTGAGAGA...TGCCTGAGAATCAGCGGCTGGAGACCCTGAACAATCTGCTACAAAGCCAGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTGCCCACCCCAACGCCCACATTGTCATACTTaGGTGAGCGCCACAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLQPLVTKKCFRFCPPQRPHCHT*VSATVP Trigger: AGGCACTGTGGCGCTCACCCAAGTATGACAATGTGG...GCGTTGGGGTGGGCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGGCTTTGTAGCAGATTGTTCAGGGTCTCCAGCCGCTGATTCTCAGGCATGTGCCCGCAGAAAGTaGGCAGGTTCTGTCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSGFVADCSGSPAADSQACARRK*AGSVTE Trigger: CTCTGTGACAGAACCTGCCCACTTTCTGCGGGCACA...TGCCTGAGAATCAGCGGCTGGAGACCCTGAACAATCTGCTACAAAGCCAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTGCAGCTCACGTAGCAGCTaGCTCTGGCTTTGTAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLVALLQPLVTKKCFRFCSSRSS*LWLCSR Trigger: TCTGCTACAAAGCCAGAGCCAGCTGCTACGTGAGCT...GCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013299.11 |
||
| CDS-3UTR CCA 90 bp | TTCTATTTGCACCAACTTCCGGTCCAGTTCAGCACGATGACCCTGGGCTCTCAGGTTCTGTCACAGAGGTaGGGCCAAGCTCCTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: FYLHQLPVQFSTMTLGSQVLSQR*GQAPSS Trigger: GGATGAAGGAGCTTGGCCCCACCTCTGTGACAGAAC...CTGAGAGCCCAGGGTCATCGTGCTGAACTGGACCGGAAGTTGGTGCAAATAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTGCCCACCCCAACGCGCCTCTGAATCTCTTTaGTCCGCCTCAAGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLQPLVTKKCFRFCPPQRASESL*SASSFP Trigger: AGGAAAACTTGAGGCGGATCAAAGAGATTCAGAGGC...GCGTTGGGGTGGGCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS-3UTR CCA 90 bp | TGGCGTTGTAGCGCTCCTGGGCTTGGCGCTGCTGTTCCTGAACCTGTGCAAGGACTTCTCATGGTCCTTTaGATTCTTCCTCTTAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WRCSAPGLGAAVPEPVQGLLMVL*ILPLRR Trigger: TCTCCTAAGAGGAAGAATCCAAAGGACCATGAGAAG...TCCTTGCACAGGTTCAGGAACAGCAGCGCCAAGCCCAGGAGCGCTACAACGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
||
| CDS-3UTR TCA 90 bp | TCGGGAAAAGATCTTGATAGCCTCTTCTATTTGCACCAACTTCCGGTCCAGTTCTTCAGTGGCTTAGGCTaGCCCTGTTCCCGGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SGKDLDSLFYLHQLPVQFFSGLG*PCSRLR Trigger: ACGCAGCCGGGAACAGGGTCAGCCTAAGCCACTGAA...GAACTGGACCGGAAGTTGGTGCAAATAGAAGAGGCTATCAAGATCTTTTCCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCCTTCTCATGGTCCTTTaGATTCTTCCTCTTAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRLVALLQPLVTKKCFRFLLMVL*ILPLRR Trigger: TCTCCTAAGAGGAAGAATCCAAAGGACCATGAGAAG...GAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| 3UTR CAA 72 bp | TTTGGGTCGGGAAAAGATCTTGATAGCCTCTTCTATTaGCACCAACTTCCGGTCCAGTTCAGCACGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: FGSGKDLDSLFY*HQLPVQFSTMT Trigger: GGTCATCGTGCTGAACTGGACCGGAAGTTGGTGCAAATAGAAGAGGCTATCAAGATCTTTTCCCGACCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
||
| CDS-3UTR GCA 90 bp | GGACTAGGTATCCATCTTCACAAAGACTTTGGGTCGGGAAAAGATCTTGATAGCAAGTCCCCACAGACCTaGTCTCTCACCTTAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGIHLHKDFGSGKDLDSKSPQT*SLTLAW Trigger: CCAAGCTAAGGTGAGAGAGCAGGTCTGTGGGGACTT...GCTATCAAGATCTTTTCCCGACCCAAAGTCTTTGTGAAGATGGATACCTAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| CDS-3UTR TCA 90 bp | GAAAAGATCTTGATAGCCTCTTCTATTTGCACCAACTTCCGGTCCAGTTCAGCAGCCTCTGAATCTCTTTaGTCCGCCTCAAGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EKILIASSICTNFRSSSAASESL*SASSFP Trigger: AGGAAAACTTGAGGCGGATCAAAGAGATTCAGAGGC...TGCTGAACTGGACCGGAAGTTGGTGCAAATAGAAGAGGCTATCAAGATCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| 3UTR CAA 72 bp | TCCATCTTCACAAAGACTTTGGGTCGGGAAAAGATCTaGATAGCCTCTTCTATTTGCACCAACTTCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIFTKTLGREKI*IASSICTNFRS Trigger: GGACCGGAAGTTGGTGCAAATAGAAGAGGCTATCAAGATCTTTTCCCGACCCAAAGTCTTTGTGAAGATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| CDS CCA 90 bp | AGGGAGATGCACCCCAGTTGCAGCAGCACGTCCCCCACGCCTCGCTaGCCACGCTCTAGGATCTCTCGGGCTTCAGGCCTGATGCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: REMHPSCSSTSPTPR*PRSRISRASGLMRG Trigger: CCCTCGCATCAGGCCTGAAGCCCGAGAGATCCTAGAGCGTGGCCAGCGAGGCGTGGGGGACGTGCTGCTGCAACTGGGGTGCATCTCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| CDS CCA 90 bp | CGTCAAGTCCCCACAGACCTGCTCTCTCACCTTAGCTTGGGGACCTaGAAGGGCGAGCTGAGGACTGGAGGCACGGGATGGTGGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RQVPTDLLSHLSLGT*KGELRTGGTGWWEP Trigger: GGGCTCCCACCATCCCGTGCCTCCAGTCCTCAGCTCGCCCTTCCAGGTCCCCAAGCTAAGGTGAGAGAGCAGGTCTGTGGGGACTTGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
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| CDS TCA 90 bp | CCTGATGCGAGGGCCACGAGGAGGACTGGAGTCCAGGTCCCGACCTaGAGTCAGCAGGTCCAGCTTCAACGCGTTTCCTTCCAGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PDARATRRTGVQVPT*SQQVQLQRVSFQAS Trigger: GGACGCCTGGAAGGAAACGCGTTGAAGCTGGACCTGCTGACTTCAGGTCGGGACCTGGACTCCAGTCCTCCTCGTGGCCCTCGCATCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| CDS-3UTR CAA 90 bp | GGGAGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCGGAGATGCACCCCAGTaGCAGCAGCACGTCCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GRLVALLQPLVTKKCFRFGDAPQ*QQHVPH Trigger: GTGGGGGACGTGCTGCTGCAACTGGGGTGCATCTCC...GAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| CDS-3UTR CAA 90 bp | ATGGGGCACATGGCCTTTCTGCGTGGCGTTGTAGCGCTCCTGGGCTTGGCGCTGTCCACATTGTCATACTaGGGTGAGCGCCACAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: MGHMAFLRGVVALLGLALSTLSY*GERHSA Trigger: GGCACTGTGGCGCTCACCCAAGTATGACAATGTGGA...CAGCGCCAAGCCCAGGAGCGCTACAACGCCACGCAGAAAGGCCATGTGCCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCGTAGCGCTCCTGGGCTaGGCGCTGCTGTTCCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GRLVALLQPLVTKKCFRFVALLG*ALLFLN Trigger: GTTCAGGAACAGCAGCGCCAAGCCCAGGAGCGCTAC...GAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013299.11 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTCCACATTGTCATACTaGGGTGAGCGCCACAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRLVALLQPLVTKKCFRFSTLSY*GERHSA Trigger: GGCACTGTGGCGCTCACCCAAGTATGACAATGTGGA...GAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCACTCGAGACTCCACATaGTCATACTTGGGTGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GRLVALLQPLVTKKCFRFTRDST*SYLGER Trigger: GCGCTCACCCAAGTATGACAATGTGGAGTCTCGAGT...GAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTGCCCACCCCAACGCTGGCTTTGTAGCAGATaGTTCAGGGTCTCCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LLQPLVTKKCFRFCPPQRWLCSR*FRVSSR Trigger: GCGGCTGGAGACCCTGAACAATCTGCTACAAAGCCA...GCGTTGGGGTGGGCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013299.11 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCTGCTTGGCAGCTAGGGCGTaGCGACTAATGAAATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: RLVALLQPLVTKKCFRFCLAARA*RLMKST Trigger: CGTGGATTTCATTAGTCGCAACGCCCTAGCTGCCAA...GCAGAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013299.11 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCGATAGCCTCTTCTATTaGCACCAACTTCCGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRLVALLQPLVTKKCFRFDSLFY*HQLPVQ Trigger: CTGGACCGGAAGTTGGTGCAAATAGAAGAGGCTATC...GAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013299.11 |
||
| CDS-3UTR CAA 90 bp | TGGGTACCAAGCGGGGAAGGACTAGGTATCCATCTTCACAAAGACTTTGGGTCGCTCTCTCACCTTAGCTaGGGGACCTGGAAGGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: WVPSGEGLGIHLHKDFGSLSHLS*GTWKGE Trigger: CTCGCCCTTCCAGGTCCCCAAGCTAAGGTGAGAGAG...CGACCCAAAGTCTTTGTGAAGATGGATACCTAGTCCTTCCCCGCTTGGTACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
||
| CDS-3UTR CAA 90 bp | GGACTAGGTATCCATCTTCACAAAGACTTTGGGTCGGGAAAAGATCTTGATAGCGGAGATGCACCCCAGTaGCAGCAGCACGTCCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GLGIHLHKDFGSGKDLDSGDAPQ*QQHVPH Trigger: GTGGGGGACGTGCTGCTGCAACTGGGGTGCATCTCC...GCTATCAAGATCTTTTCCCGACCCAAAGTCTTTGTGAAGATGGATACCTAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
||
| CDS TCA 90 bp | GTTCCCGGCTGCGTTCCTGGTCTTGGAAGCGCCTCTGAATCTCTTTaGTCCGCCTCAAGTTTTCCTTCTCATGGTCCTTTGGATTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VPGCVPGLGSASESL*SASSFPSHGPLDSS Trigger: GGAAGAATCCAAAGGACCATGAGAAGGAAAACTTGAGGCGGATCAAAGAGATTCAGAGGCGCTTCCAAGACCAGGAACGCAGCCGGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCTGGTGGCCCTTCTGCAGCCCCTGGTGACTAAGAAGTGCTTTCGATTCATCTTCACAAAGACTTaGGGTCGGGAAAAGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GRLVALLQPLVTKKCFRFIFTKT*GREKIL Trigger: CAAGATCTTTTCCCGACCCAAAGTCTTTGTGAAGAT...GAATCGAAAGCACTTCTTAGTCACCAGGGGCTGCAGAAGGGCCACCAGCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013299.11 |
||
| CDS CCA 90 bp | CTGAATCTCTTTGATCCGCCTCAAGTTTTCCTTCTCATGGTCCTTTaGATTCTTCCTCTTAGGAGAGACCCCCGAACCGAGGGAGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LNLFDPPQVFLLMVL*ILPLRRDPRTEGDA Trigger: TGCATCTCCCTCGGTTCGGGGGTCTCTCCTAAGAGGAAGAATCCAAAGGACCATGAGAAGGAAAACTTGAGGCGGATCAAAGAGATTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS CCA 72 bp | CGGCCGCCGGTAGTAGTCCGGGCAGAGAGTGGGGTCTaGGGGGATGGGTCCAGAGATGCGGGACGGGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RPPVVVRAESGV*GDGSRDAGRAL Trigger: GAGGGCCCGTCCCGCATCTCTGGACCCATCCCCCCAGACCCCACTCTCTGCCCGGACTACTACCGGCGGCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS CCA 72 bp | CACCCCAGTTGCAGCAGCACGTCCCCCACGCCTCGCTaGCCACGCTCTAGGATCTCTCGGGCTTCAGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HPSCSSTSPTPR*PRSRISRASGL Trigger: CAGGCCTGAAGCCCGAGAGATCCTAGAGCGTGGCCAGCGAGGCGTGGGGGACGTGCTGCTGCAACTGGGGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS CAA 72 bp | CAGGTCCAGCTTCAACGCGTTTCCTTCCAGGCGTCCTaGGGCCGAGGCCGGCCGCCGGTAGTAGTCCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QVQLQRVSFQAS*GRGRPPVVVRA Trigger: TGCCCGGACTACTACCGGCGGCCGGCCTCGGCCCAAGGACGCCTGGAAGGAAACGCGTTGAAGCTGGACCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS CCA 72 bp | CCCACAGACCTGCTCTCTCACCTTAGCTTGGGGACCTaGAAGGGCGAGCTGAGGACTGGAGGCACGGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: PTDLLSHLSLGT*KGELRTGGTGW Trigger: CCATCCCGTGCCTCCAGTCCTCAGCTCGCCCTTCCAGGTCCCCAAGCTAAGGTGAGAGAGCAGGTCTGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212061.2 |
||
| CDS TCA 72 bp | TTGGGTGAGCGCCACAGTGCCTTCAGTGGCTTAGGCTaGCCCTGTTCCCGGCTGCGTTCCTGGTCTTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LGERHSAFSGLG*PCSRLRSWSWK Trigger: CTTCCAAGACCAGGAACGCAGCCGGGAACAGGGTCAGCCTAAGCCACTGAAGGCACTGTGGCGCTCACCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS CAA 90 bp | GTGGGGCCAAGCTCCTTCATCCTGGCCTTGACTCGAGACTCCACATaGTCATACTTGGGTGAGCGCCACAGTGCCTTCAGTGGCTTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VGPSSFILALTRDST*SYLGERHSAFSGLG Trigger: GCCTAAGCCACTGAAGGCACTGTGGCGCTCACCCAAGTATGACAATGTGGAGTCTCGAGTCAAGGCCAGGATGAAGGAGCTTGGCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
||
| CDS CAA 90 bp | GCAGGTTCTGTCACAGAGGTGGGGCCAAGCTCCTTCATCCTGGCCTaGACTCGAGACTCCACATTGTCATACTTGGGTGAGCGCCACAGT | + |
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Preference number: 6 (lower is better) Translates to: AGSVTEVGPSSFILA*TRDSTLSYLGERHS Trigger: ACTGTGGCGCTCACCCAAGTATGACAATGTGGAGTCTCGAGTCAAGGCCAGGATGAAGGAGCTTGGCCCCACCTCTGTGACAGAACCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| CDS CAA 72 bp | ATCCTGGCCTTGACTCGAGACTCCACATTGTCATACTaGGGTGAGCGCCACAGTGCCTTCAGTGGCTTAGGC | + |
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Preference number: 6 (lower is better) Translates to: ILALTRDSTLSY*GERHSAFSGLG Trigger: GCCTAAGCCACTGAAGGCACTGTGGCGCTCACCCAAGTATGACAATGTGGAGTCTCGAGTCAAGGCCAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| CDS CAA 72 bp | GTCACAGAGGTGGGGCCAAGCTCCTTCATCCTGGCCTaGACTCGAGACTCCACATTGTCATACTTGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: VTEVGPSSFILA*TRDSTLSYLGE Trigger: CTCACCCAAGTATGACAATGTGGAGTCTCGAGTCAAGGCCAGGATGAAGGAGCTTGGCCCCACCTCTGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| CDS CAA 90 bp | CTTCAGTGGCTTAGGCTGACCCTGTTCCCGGCTGCGTTCCTGGTCTaGGAAGCGCCTCTGAATCTCTTTGATCCGCCTCAAGTTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LQWLRLTLFPAAFLV*EAPLNLFDPPQVFL Trigger: AAGGAAAACTTGAGGCGGATCAAAGAGATTCAGAGGCGCTTCCAAGACCAGGAACGCAGCCGGGAACAGGGTCAGCCTAAGCCACTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| CDS CAA 72 bp | AGCTCCTTCATCCTGGCCTTGACTCGAGACTCCACATaGTCATACTTGGGTGAGCGCCACAGTGCCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SSFILALTRDST*SYLGERHSAFS Trigger: ACTGAAGGCACTGTGGCGCTCACCCAAGTATGACAATGTGGAGTCTCGAGTCAAGGCCAGGATGAAGGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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| CDS TCA 72 bp | TGTTCCCGGCTGCGTTCCTGGTCTTGGAAGCGCCTCTaGATCTCTTTGATCCGCCTCAAGTTTTCCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: CSRLRSWSWKRL*ISLIRLKFSFS Trigger: TGAGAAGGAAAACTTGAGGCGGATCAAAGAGATTCAGAGGCGCTTCCAAGACCAGGAACGCAGCCGGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013299.11 ENSMUST00000212061.2 |
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