RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENHO (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028445

Ensembl transcript IDs: ENSMUST00000127306.2

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGTCCAGTGTCAAATCGACTGGACCCCAGGCCGACTGACTTCTTaGATCCGATTCCACGCTCTGACTCAGGTATACTCAGGTCCAGGA +
Preference number: 1 (lower is better)
Translates to: WVQCQIDWTPGRLTS*IRFHALTQVYSGPG
Trigger: TCCTGGACCTGAGTATACCTGAGTCAGAGCGTGGAATCGGATCCAAGAAGTCAGTCGGCCTGGGGTCCAGTCGATTTGACACTGGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000127306.2
3UTR CAA 90 bp CTGGGTCCAGTGTCAAATCGACTGGACCCCAGGCCGACTGACTTCTaGGATCCGATTCCACGCTCTGACTCAGGTATACTCAGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: LGPVSNRLDPRPTDF*DPIPRSDSGILRSR
Trigger: CCTGGACCTGAGTATACCTGAGTCAGAGCGTGGAATCGGATCCAAGAAGTCAGTCGGCCTGGGGTCCAGTCGATTTGACACTGGACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000127306.2
3UTR-3UTR CCA 90 bp AGGGAGCCCAGATGTGCTGAGCCTAGGGAAGGCATGGACTCAGCCCTTGGCCCTTACAATCTAGGCTGCTaGGTCCAGTGTCAAATCGAC +
Preference number: 2 (lower is better)
Translates to: REPRCAEPREGMDSALGPYNLGC*VQCQID
Trigger: GTCGATTTGACACTGGACCCAGCAGCCTAGATTGTA...AGGGCCAAGGGCTGAGTCCATGCCTTCCCTAGGCTCAGCACATCTGGGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000127306.2
3UTR CCA 72 bp TGTCAAATCGACTGGACCCCAGGCCGACTGACTTCTTaGATCCGATTCCACGCTCTGACTCAGGTATACTCA +
Preference number: 3 (lower is better)
Translates to: CQIDWTPGRLTS*IRFHALTQVYS
Trigger: TGAGTATACCTGAGTCAGAGCGTGGAATCGGATCCAAGAAGTCAGTCGGCCTGGGGTCCAGTCGATTTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000127306.2
CDS-3UTR CCA 90 bp CCATGGGGTTCCCGTTTGCTCCCCAACCTAGGGAGCCCAGATGTGCTGAGCCTAGGGCTTCTGGGGTGGTaGCGCCTTCTCAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: PWGSRLLPNLGSPDVLSLGLLGW*RLLRTG
Trigger: CCCTGTCCTGAGAAGGCGCCACCACCCCAGAAGCCC...TAGGCTCAGCACATCTGGGCTCCCTAGGTTGGGGAGCAAACGGGAACCCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000127306.2
CDS-3UTR TCA 90 bp CCATGGGGTTCCCGTTTGCTCCCCAACCTAGGGAGCCCAGATGTGCTGAGCCTATGCAGACGATGGCGATaGGAGCCCCTTGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: PWGSRLLPNLGSPDVLSLCRRWR*EPLGRW
Trigger: CCATCTCCCAAGGGGCTCTCATCGCCATCGTCTGCA...TAGGCTCAGCACATCTGGGCTCCCTAGGTTGGGGAGCAAACGGGAACCCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000127306.2
3UTR CAA 72 bp TCCAGGCCTTTCTCTCTAGGGCCACTCAGGCCTCTCTaGGAGCCAGGCTGGCTACAATCTAGGCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SRPFSLGPLRPL*EPGWLQSRLLG
Trigger: ACCCAGCAGCCTAGATTGTAGCCAGCCTGGCTCCAAGAGAGGCCTGAGTGGCCCTAGAGAGAAAGGCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000127306.2
CDS-3UTR CCA 90 bp GTGTCAAATCGACTGGACCCCAGGCCGACTGACTTCTTGGATCCGATTCCACGCTCATGGCTGGGCTTCTaGGGTGGTGGCGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VSNRLDPRPTDFLDPIPRSWLGF*GGGAFS
Trigger: TGAGAAGGCGCCACCACCCCAGAAGCCCAGCCATGA...GCGTGGAATCGGATCCAAGAAGTCAGTCGGCCTGGGGTCCAGTCGATTTGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000127306.2
CDS-3UTR CCA 90 bp GGGTTCCCGTTTGCTCCCCAACCTAGGGAGCCCAGATGTGCTGAGCCTAGGGAAGGCTGGAGTTGGGACTaGATTCCGAGAGAGAATCGA +
Preference number: 4 (lower is better)
Translates to: GFPFAPQPREPRCAEPREGWSWD*IPRENR
Trigger: TCGATTCTCTCTCGGAATCCAGTCCCAACTCCAGCC...TTCCCTAGGCTCAGCACATCTGGGCTCCCTAGGTTGGGGAGCAAACGGGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000127306.2
CDS-3UTR CCA 90 bp TGGAGCCAGGCTGGCTACAATCTAGGCTGCTGGGTCCAGTGTCAAATCGACTGGTCAGCAGATCGAGAATaGCAGGCCCAGCAGAGAATG +
Preference number: 4 (lower is better)
Translates to: WSQAGYNLGCWVQCQIDWSADRE*QAQQRM
Trigger: CATTCTCTGCTGGGCCTGCCATTCTCGATCTGCTGA...CCAGTCGATTTGACACTGGACCCAGCAGCCTAGATTGTAGCCAGCCTGGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000127306.2
3UTR CAA 72 bp GTGTCAAATCGACTGGACCCCAGGCCGACTGACTTCTaGGATCCGATTCCACGCTCTGACTCAGGTATACTC +
Preference number: 4 (lower is better)
Translates to: VSNRLDPRPTDF*DPIPRSDSGIL
Trigger: GAGTATACCTGAGTCAGAGCGTGGAATCGGATCCAAGAAGTCAGTCGGCCTGGGGTCCAGTCGATTTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000127306.2
CDS-3UTR CAA 90 bp CCAGTGTCAAATCGACTGGACCCCAGGCCGACTGACTTCTTGGATCCGATTCCAGGCGATGAGAGCCCCTaGGGAGATGGCTGCCCCCAT +
Preference number: 5 (lower is better)
Translates to: PVSNRLDPRPTDFLDPIPGDESP*GDGCPH
Trigger: ATGGGGGCAGCCATCTCCCAAGGGGCTCTCATCGCC...TGGAATCGGATCCAAGAAGTCAGTCGGCCTGGGGTCCAGTCGATTTGACACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000127306.2
CDS-3UTR CAA 90 bp CCATGGGGTTCCCGTTTGCTCCCCAACCTAGGGAGCCCAGATGTGCTGAGCCTAAAGCCTACGAGGCCATaGCAGACGATGGCGATGAGA +
Preference number: 5 (lower is better)
Translates to: PWGSRLLPNLGSPDVLSLKPTRP*QTMAMR
Trigger: TCTCATCGCCATCGTCTGCAATGGCCTCGTAGGCTT...TAGGCTCAGCACATCTGGGCTCCCTAGGTTGGGGAGCAAACGGGAACCCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000127306.2