Pregenerated sensors for ENDOV (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039850Ensembl transcript IDs: ENSMUST00000064513.9, ENSMUST00000106244.9, ENSMUST00000106245.9, ENSMUST00000129327.9, ENSMUST00000140323.9, ENSMUST00000143817.8, ENSMUST00000153204.9, ENSMUST00000154370.8
Found 398 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCTCGGACACCCTGGGTGGCCGTGGGGTTCTTGCCCATGGAGGCTaGCCTATACATACCAGGTGTGTGGTGGGGAGGCTGCCTCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: CSDTLGGRGVLAHGG*PIHTRCVVGRLPPA Trigger: GGCAGGAGGCAGCCTCCCCACCACACACCTGGTATGTATAGGCCAGCCTCCATGGGCAAGAACCCCACGGCCACCCAGGGTGTCCGAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR GCA 90 bp | GCCAGGAAGAACCAGGTCTGTATTCCCAAGAGGGCAAGGCAGAGCTaGTGGCACAGGTTGCCAACCGCAGGGCCTCTGGGCACCCGAGGC | + |
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Preference number: 1 (lower is better) Translates to: ARKNQVCIPKRARQS*WHRLPTAGPLGTRG Trigger: GCCTCGGGTGCCCAGAGGCCCTGCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACAGACCTGGTTCTTCCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR GCA 90 bp | CACTCTGGTGAGCCTAGAATGTGTGTGGGAGGACAGGGAGGGCACTaGAGCCCTGCTGTTGGCCTGCCTCAGCAGCCCCTTCAAGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: HSGEPRMCVGGQGGH*SPAVGLPQQPLQGH Trigger: GTGGCCTTGAAGGGGCTGCTGAGGCAGGCCAACAGCAGGGCTGCAGTGCCCTCCCTGTCCTCCCACACACATTCTAGGCTCACCAGAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR GCA 90 bp | CCTGGAAGCCTGGCTCGGGGGCTTTCCGGTCTGAGCTGGAGTCTCTaGCGTCGCATTCAGGAGGCCTGCCTTGATCTGCAAGTGCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PGSLARGLSGLSWSL*RRIQEACLDLQVLL Trigger: CAGGAGCACTTGCAGATCAAGGCAGGCCTCCTGAATGCGACGGCAGAGACTCCAGCTCAGACCGGAAAGCCCCCGAGCCAGGCTTCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
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| 3UTR CCA 90 bp | CTCTCTGGTGAGAGGGTGGCAGGAAGAGGAGTGAGGAGCCGAGCCTaGGGCTTTCTCACCATGGGCCTCAACCGGCTTCCCATCTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: LSGERVAGRGVRSRA*GFLTMGLNRLPIWH Trigger: GTGCCAGATGGGAAGCCGGTTGAGGCCCATGGTGAGAAAGCCCCAGGCTCGGCTCCTCACTCCTCTTCCTGCCACCCTCTCACCAGAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR TCA 90 bp | GGAATATGGTCCTGCTGGGGCATGGTGACCACACTGACTAGCCAGTaGTGGAGGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTG | + |
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Preference number: 1 (lower is better) Translates to: GIWSCWGMVTTLTSQ*WRRLAATGLHWPTL Trigger: CAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCACTGGCTAGTCAGTGTGGTCACCATGCCCCAGCAGGACCATATTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
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| 3UTR CCA 90 bp | CTGGCCTACACTGGCCCACGCTGGATTAAGCCCGCTGCATCCTCCTaGAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTG | + |
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Preference number: 1 (lower is better) Translates to: LAYTGPRWIKPAASS*SSMHCCLWGVVLHL Trigger: CAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGGCTTAATCCAGCGTGGGCCAGTGTAGGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
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| 3UTR CCA 90 bp | CTGTGTCCCAGCTCAGATGCCACTCTGGTGAGCCTAGAATGTGTGTaGGAGGACAGGGAGGGCACTGCAGCCCTGCTGTTGGCCTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: LCPSSDATLVSLECV*EDREGTAALLLACL Trigger: GAGGCAGGCCAACAGCAGGGCTGCAGTGCCCTCCCTGTCCTCCCACACACATTCTAGGCTCACCAGAGTGGCATCTGAGCTGGGACACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR CCA 90 bp | GAAGGCCACGTTCAGGTTCTGCCCTGCTCCTCAGTATGTGGGGAGTaGGCCCCTGGCAGTGTCTGCCTGTACAGCAGCCTGGAGAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: EGHVQVLPCSSVCGE*APGSVCLYSSLESY Trigger: GTAGCTCTCCAGGCTGCTGTACAGGCAGACACTGCCAGGGGCCCACTCCCCACATACTGAGGAGCAGGGCAGAACCTGAACGTGGCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR CCA 90 bp | GCTCCTGGGCCTCCTTGGGGGCATGCATTTGGCCTCTGCTCTTTCTaGCTCCTGTCCTTTCTCTGTGCAGGAGCCACCCCAAGCTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: APGPPWGHAFGLCSF*LLSFLCAGATPSCP Trigger: AGGGCAGCTTGGGGTGGCTCCTGCACAGAGAAAGGACAGGAGCCAGAAAGAGCAGAGGCCAAATGCATGCCCCCAAGGAGGCCCAGGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
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| 3UTR TCA 90 bp | GACTGTACCCAGGCTGGAGAAGGAGGCCAGAGGTCCGAGTCTTCCTaGTGCCCGGTTCCCTCCAACTGCTGGTCCTTCTGCTCCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: DCTQAGEGGQRSESS*CPVPSNCWSFCSWK Trigger: CTTCCAGGAGCAGAAGGACCAGCAGTTGGAGGGAACCGGGCATCAGGAAGACTCGGACCTCTGGCCTCCTTCTCCAGCCTGGGTACAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
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| 3UTR GCA 90 bp | ATGTTTGTGAGAGACTGCGGAGGGCCAGTGGGTGGATGTGGACACTaGAGGAATGTCCTGCTCGGACACCCTGGGTGGCCGTGGGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: MFVRDCGGPVGGCGH*RNVLLGHPGWPWGS Trigger: AGAACCCCACGGCCACCCAGGGTGTCCGAGCAGGACATTCCTGCAGTGTCCACATCCACCCACTGGCCCTCCGCAGTCTCTCACAAACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR CCA 90 bp | AGTGATGGAGGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTaGATTAAGCCCGCTGCATCCTCCTGGAGTTCCATGCACTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: SDGGGWQPLAYTGPR*IKPAASSWSSMHCC Trigger: GCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGGCTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
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| 3UTR TCA 90 bp | GTTAGGGCAGTGCAGTGGGGATGCTGGATTGGGTTGCTGCTGGGGTaGGTGGGCCAGGTGGGTAAGCCTCTACCTTACGACGCTGATGCT | + |
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Preference number: 1 (lower is better) Translates to: VRAVQWGCWIGLLLG*VGQVGKPLPYDADA Trigger: AGCATCAGCGTCGTAAGGTAGAGGCTTACCCACCTGGCCCACTCACCCCAGCAGCAACCCAATCCAGCATCCCCACTGCACTGCCCTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR GCA 90 bp | GGAGTCTCTGCCGTCGCATTCAGGAGGCCTGCCTTGATCTGCAAGTaGTCCTGGGCCTCCTTGGGGGCATGCATTTGGCCTCTGCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: GVSAVAFRRPALICK*SWASLGACIWPLLF Trigger: AAAGAGCAGAGGCCAAATGCATGCCCCCAAGGAGGCCCAGGAGCACTTGCAGATCAAGGCAGGCCTCCTGAATGCGACGGCAGAGACTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
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| 3UTR CCA 90 bp | CCCCTCCACAACTCTGTCTTGACAGGGCTTGAGAAGGGAGAGGTCTaGAAGTTGGGAAGGCAGATGGTGGGGCCAGCTGTAGGCCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: PLHNSVLTGLEKGEV*KLGRQMVGPAVGPP Trigger: TGGAGGGCCTACAGCTGGCCCCACCATCTGCCTTCCCAACTTCCAGACCTCTCCCTTCTCAAGCCCTGTCAAGACAGAGTTGTGGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR CCA 90 bp | TCAGCCTGGCGTATAGGTTCTGGGATCCGGAACCTACAGCAGTGGTaGGTGAGGCGCACAGCGACCTCCAGGCTTATTCTGTGGCCCACA | + |
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Preference number: 1 (lower is better) Translates to: SAWRIGSGIRNLQQW*VRRTATSRLILWPT Trigger: TGTGGGCCACAGAATAAGCCTGGAGGTCGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCGGATCCCAGAACCTATACGCCAGGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
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| 3UTR CCA 90 bp | ATGTCAGCCTGGCGTATAGGTTCTGGGATCCGGAACCTACAGCAGTaGTGGGTGAGGCGCACAGCGACCTCCAGGCTTATTCTGTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: MSAWRIGSGIRNLQQ*WVRRTATSRLILWP Trigger: GGGCCACAGAATAAGCCTGGAGGTCGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCGGATCCCAGAACCTATACGCCAGGCTGACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
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| 3UTR TCA 90 bp | TGTACAGCAGCCTGGAGAGCTACTCTGCCCAGGCTGAGGAGAGTCTaGGTGTTGGAAGGTGCCAAGCTGAGCAGCATCAGGCCTGACTTC | + |
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Preference number: 1 (lower is better) Translates to: CTAAWRATLPRLRRV*VLEGAKLSSIRPDF Trigger: GAAGTCAGGCCTGATGCTGCTCAGCTTGGCACCTTCCAACACTCAGACTCTCCTCAGCCTGGGCAGAGTAGCTCTCCAGGCTGCTGTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR GCA 90 bp | CAAGAGACATGTCACAGGCGTGCCATCTCTGTGTCCCAGCTCAGATaGCACTCTGGTGAGCCTAGAATGTGTGTGGGAGGACAGGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: QETCHRRAISVSQLR*HSGEPRMCVGGQGG Trigger: CCCTCCCTGTCCTCCCACACACATTCTAGGCTCACCAGAGTGGCATCTGAGCTGGGACACAGAGATGGCACGCCTGTGACATGTCTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR GCA 90 bp | ATCAATTGGTTAGGGCAGTGCAGTGGGGATGCTGGATTGGGTTGCTaGTGGGGTGAGTGGGCCAGGTGGGTAAGCCTCTACCTTACGACG | + |
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Preference number: 1 (lower is better) Translates to: INWLGQCSGDAGLGC*WGEWARWVSLYLTT Trigger: CGTCGTAAGGTAGAGGCTTACCCACCTGGCCCACTCACCCCAGCAGCAACCCAATCCAGCATCCCCACTGCACTGCCCTAACCAATTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR CCA 90 bp | GCTCCTGCACTTTATCTTCCCATTTCCCAGGAGCCTTTAAGGACCTaGAGCAGCGGGCGCCTGCTCTGTGTGGGGAATGGGAACCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: APALYLPISQEPLRT*SSGRLLCVGNGNQS Trigger: ACTCTGGTTCCCATTCCCCACACAGAGCAGGCGCCCGCTGCTCCAGGTCCTTAAAGGCTCCTGGGAAATGGGAAGATAAAGTGCAGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR TCA 90 bp | CAAAATCCCAGCCCAAGCCCAAACTACACCCTCTCCATCAAGACCTaGTCCAGGTGCCTCTGCCTGGAGTCCCGGCTCCTGCACTTTATC | + |
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Preference number: 1 (lower is better) Translates to: QNPSPSPNYTLSIKT*SRCLCLESRLLHFI Trigger: GATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAGGTCTTGATGGAGAGGGTGTAGTTTGGGCTTGGGCTGGGATTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR GCA 90 bp | CCATCAAGACCTGATCCAGGTGCCTCTGCCTGGAGTCCCGGCTCCTaGACTTTATCTTCCCATTTCCCAGGAGCCTTTAAGGACCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: PSRPDPGASAWSPGS*TLSSHFPGAFKDLE Trigger: CTCCAGGTCCTTAAAGGCTCCTGGGAAATGGGAAGATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAGGTCTTGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR CCA 90 bp | CAAACTACACCCTCTCCATCAAGACCTGATCCAGGTGCCTCTGCCTaGAGTCCCGGCTCCTGCACTTTATCTTCCCATTTCCCAGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: QTTPSPSRPDPGASA*SPGSCTLSSHFPGA Trigger: GGCTCCTGGGAAATGGGAAGATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAGGTCTTGATGGAGAGGGTGTAGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR GCA 90 bp | CTTAGCATTCAAGAACAGAGACCTGGGGCTGGAGCCCTGTACAGATaGAATCCCCAGGTCTCAACCCGAGACCTAGCCCTTCAAGGACTC | + |
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Preference number: 1 (lower is better) Translates to: LSIQEQRPGAGALYR*NPQVSTRDLALQGL Trigger: GAGTCCTTGAAGGGCTAGGTCTCGGGTTGAGACCTGGGGATTGCATCTGTACAGGGCTCCAGCCCCAGGTCTCTGTTCTTGAATGCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR TCA 90 bp | AATCCCCAGGTCTCAACCCGAGACCTAGCCCTTCAAGGACTCTTCTaGGGAGGCAGGACAGTATGCTCCCATTGGGGTCTAAGGAGCATA | + |
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Preference number: 1 (lower is better) Translates to: NPQVSTRDLALQGLF*GGRTVCSHWGLRSI Trigger: TATGCTCCTTAGACCCCAATGGGAGCATACTGTCCTGCCTCCTCAGAAGAGTCCTTGAAGGGCTAGGTCTCGGGTTGAGACCTGGGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR CCA 90 bp | AGAGTCCTATTCTATCACCACGGCGACACCCACCTGACTACTTCTTaGGCCATTCATCTGCAAGTCAGTGGTCCCGTGCCGCTGTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: RVLFYHHGDTHLTTS*AIHLQVSGPVPLFC Trigger: ACAGAACAGCGGCACGGGACCACTGACTTGCAGATGAATGGCCCAAGAAGTAGTCAGGTGGGTGTCGCCGTGGTGATAGAATAGGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR TCA 90 bp | CACCCACCATCTCACTATCAAGGAAAGAGTCACCCAGAGGCAGAGTaGCTTGGCCAGGCACACTTAGCATTCAAGAACAGAGACCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: HPPSHYQGKSHPEAE*LGQAHLAFKNRDLG Trigger: CCCCAGGTCTCTGTTCTTGAATGCTAAGTGTGCCTGGCCAAGTCACTCTGCCTCTGGGTGACTCTTTCCTTGATAGTGAGATGGTGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR GCA 90 bp | AGGCTGGCCTATACATACCAGGTGTGTGGTGGGGAGGCTGCCTCCTaGCCCACACTTCATTTACTGGGTGACAGAACCACATATCTATCT | + |
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Preference number: 1 (lower is better) Translates to: RLAYTYQVCGGEAAS*PTLHLLGDRTTYLS Trigger: AGATAGATATGTGGTTCTGTCACCCAGTAAATGAAGTGTGGGGCAGGAGGCAGCCTCCCCACCACACACCTGGTATGTATAGGCCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR GCA 90 bp | TGTATGTGTGGTTGTGTGTGTGTGCACAGAATGTTTGTGAGAGACTaGGGAGGGCCAGTGGGTGGATGTGGACACTGCAGGAATGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: CMCGCVCVHRMFVRD*GGPVGGCGHCRNVL Trigger: CAGGACATTCCTGCAGTGTCCACATCCACCCACTGGCCCTCCGCAGTCTCTCACAAACATTCTGTGCACACACACACAACCACACATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR CCA 90 bp | AGGCCTGAAGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTaGTCTGGAATATGGTCCTGCTGGGGCATGGTGACCACACTGACT | + |
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Preference number: 1 (lower is better) Translates to: RPEVLHVLLVLVCAS*SGIWSCWGMVTTLT Trigger: AGTCAGTGTGGTCACCATGCCCCAGCAGGACCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTTCAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
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| 3UTR CCA 90 bp | GAGCAGTCAGTGCTCTTAACCATTGAGCCACCTCTCCAGCCCAGTTaGTCGTGTTTGTTCAGCAAGCACAGAGCCTTGGCTTTGATCTCC | + |
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Preference number: 1 (lower is better) Translates to: EQSVLLTIEPPLQPS*SCLFSKHRALALIS Trigger: GGAGATCAAAGCCAAGGCTCTGTGCTTGCTGAACAAACACGACCAACTGGGCTGGAGAGGTGGCTCAATGGTTAAGAGCACTGACTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR CCA 90 bp | ACCATCTCACTATCAAGGAAAGAGTCACCCAGAGGCAGAGTGACTTaGCCAGGCACACTTAGCATTCAAGAACAGAGACCTGGGGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: TISLSRKESPRGRVT*PGTLSIQEQRPGAG Trigger: TCCAGCCCCAGGTCTCTGTTCTTGAATGCTAAGTGTGCCTGGCCAAGTCACTCTGCCTCTGGGTGACTCTTTCCTTGATAGTGAGATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR TCA 90 bp | GAGAGTCTGAGTGTTGGAAGGTGCCAAGCTGAGCAGCATCAGGCCTaGCTTCTGTGTCTTGGGGAAGGTCTTCTGTTAAGAGTTGAACAG | + |
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Preference number: 1 (lower is better) Translates to: ESLSVGRCQAEQHQA*LLCLGEGLLLRVEQ Trigger: CTGTTCAACTCTTAACAGAAGACCTTCCCCAAGACACAGAAGTCAGGCCTGATGCTGCTCAGCTTGGCACCTTCCAACACTCAGACTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR CCA 90 bp | CCTACTTCTCTAAACAGCTTCCCTTCAAACAAGGATGCTGTGTGCTaGCCCTCAAGCTCGGCTGCCTTACTTCTCACCTCACATCTAAGC | + |
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Preference number: 1 (lower is better) Translates to: PTSLNSFPSNKDAVC*PSSSAALLLTSHLS Trigger: GCTTAGATGTGAGGTGAGAAGTAAGGCAGCCGAGCTTGAGGGCCAGCACACAGCATCCTTGTTTGAAGGGAAGCTGTTTAGAGAAGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR CCA 90 bp | GTATCAGATCCCATTACAGATGGTTGTGAGCCAACATGTGGTTGCTaGGAGTTGAACTCGGGACCTCTGGAAGAGCAGTCAGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: VSDPITDGCEPTCGC*ELNSGPLEEQSVLL Trigger: TAAGAGCACTGACTGCTCTTCCAGAGGTCCCGAGTTCAACTCCCAGCAACCACATGTTGGCTCACAACCATCTGTAATGGGATCTGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCACTTAGGGCCCCCTGCCCTCAAGCACCGGTGTCTGGGGTGTCTGAACGCCAGGCACCTTGGGGGCTaGAGCCTGGCTATGACACGG | + |
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Preference number: 2 (lower is better) Translates to: LHLGPPALKHRCLGCLNARHLGG*SLAMTR Trigger: CCGTGTCATAGCCAGGCTGCAGCCCCCAAGGTGCCT...GGCGTTCAGACACCCCAGACACCGGTGCTTGAGGGCAGGGGGCCCTAAGTGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR-3UTR GCA 90 bp | CCAGTGATGGAGGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAGCTGCTGGCACAGGTTaGCAACCGCAGGGCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PVMEEAGSHWPTLAHAGLAAGTG*QPQGLW Trigger: CCAGAGGCCCTGCGGTTGGCAACCTGTGCCAGCAGC...TAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCACTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
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| 3UTR-3UTR CCA 90 bp | GGGATCCGGAACCTACAGCAGTGGTGGGTGAGGCGCACAGCGACCTCCAGGCTTAGGGGCTTGGTGCTGTaGTCATGGCTCCTCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: GIRNLQQWWVRRTATSRLRGLVL*SWLLRA Trigger: GGCCCTGAGGAGCCATGACCACAGCACCAAGCCCCT...AAGCCTGGAGGTCGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCGGATCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGCCGAGCCTGGGGCTTTCTCACCATGGGCCTCAACCGGCTTCCCATCTGAGCGGCAAACAAGCTTaGGGACAGGCACCTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: EEPSLGLSHHGPQPASHLSGKQA*GQAPWG Trigger: CCCCCAAGGTGCCTGTCCTCAAGCTTGTTTGCCGCT...CAGATGGGAAGCCGGTTGAGGCCCATGGTGAGAAAGCCCCAGGCTCGGCTCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCACTTAGGGCCCCCTGCCCTCAAGCACCGGTGTCTGGGGTGTCTGAACGCCCTACTCTGCCCAGGCTaGGGAGAGTCTGAGTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LHLGPPALKHRCLGCLNALLCPG*GESECW Trigger: CCAACACTCAGACTCTCCTCAGCCTGGGCAGAGTAG...GGCGTTCAGACACCCCAGACACCGGTGCTTGAGGGCAGGGGGCCCTAAGTGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGCAGTGGTGGGTGAGGCGCACAGCGACCTCCAGGCTTATTCTGTGGCCCACAGGGGCTTGGTGCTGTaGTCATGGCTCCTCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: TAVVGEAHSDLQAYSVAHRGLVL*SWLLRA Trigger: GGCCCTGAGGAGCCATGACCACAGCACCAAGCCCCT...GTGGGCCACAGAATAAGCCTGGAGGTCGCTGTGCGCCTCACCCACCACTGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAGTGATGGAGGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTACCCATCGCCCACTCTTaGGCCTGCTCCAGGATTGAG | + |
|
Preference number: 2 (lower is better) Translates to: PVMEEAGSHWPTLAHAGLPIAHS*ACSRIE Trigger: CTCAATCCTGGAGCAGGCTCAAGAGTGGGCGATGGG...TAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGCCCGCTGCATCCTCCTGGAGTTCCATaGACTGTTGCCTCTGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: EAGSHWPTLAHAGLSPLHPPGVP*TVASGV Trigger: CACCCCAGAGGCAACAGTGCATGGAACTCCAGGAGG...ATGCAGCGGGCTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR GCA 90 bp | AGATGCCACTCTGGTGAGCCTAGAATGTGTGTGGGAGGACAGGGAGGGCACTGCGCTGCTGGCACAGGTTaGCAACCGCAGGGCCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RCHSGEPRMCVGGQGGHCAAGTG*QPQGLW Trigger: CCAGAGGCCCTGCGGTTGGCAACCTGTGCCAGCAGC...GCAGTGCCCTCCCTGTCCTCCCACACACATTCTAGGCTCACCAGAGTGGCATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAGGGCCAGTGGGTGGATGTGGACACTGCAGGAATGTCCTGCTCGGACACCCTAGGGCAAGGCAGAGCTaGTGGCACAGGTTGCCAACC | + |
|
Preference number: 2 (lower is better) Translates to: GGPVGGCGHCRNVLLGHPRARQS*WHRLPT Trigger: GGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCT...AGGGTGTCCGAGCAGGACATTCCTGCAGTGTCCACATCCACCCACTGGCCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGAGCCGAGCCTGGGGCTTTCTCACCATGGGCCTCAACCGGCTTCCCATCTGGTTGCCTCTGGGGTGTaGTGCTCCACCTGTGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: EEPSLGLSHHGPQPASHLVASGV*CSTCDC Trigger: ACAGTCACAGGTGGAGCACCACACCCCAGAGGCAAC...CAGATGGGAAGCCGGTTGAGGCCCATGGTGAGAAAGCCCCAGGCTCGGCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGCCCGCTGCATGTTGCCTCTGGGGTGTaGTGCTCCACCTGTGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: EAGSHWPTLAHAGLSPLHVASGV*CSTCDC Trigger: ACAGTCACAGGTGGAGCACCACACCCCAGAGGCAAC...ATGCAGCGGGCTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR CCA 90 bp | GCGCCTGCTCTGTGTGGGGAATGGGAACCAGAGTCCTATTCTATCACCACGGCGGAGGCTGGCAGCCACTaGCCTACACTGGCCCACGCT | + |
|
Preference number: 2 (lower is better) Translates to: APALCGEWEPESYSITTAEAGSH*PTLAHA Trigger: AGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTC...CGCCGTGGTGATAGAATAGGACTCTGGTTCCCATTCCCCACACAGAGCAGGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGCCCGCTGGTGTGCTTCCTGGTCTaGAATATGGTCCTGCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: EEAGSHWPTLAHAGLSPLVCFLV*NMVLLG Trigger: CCCCAGCAGGACCATATTCCAGACCAGGAAGCACAC...CAGCGGGCTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR CCA 90 bp | CCGGAACCTACAGCAGTGGTGGGTGAGGCGCACAGCGACCTCCAGGCTTATTCTAGGGGCTTGGTGCTGTaGTCATGGCTCCTCAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: PEPTAVVGEAHSDLQAYSRGLVL*SWLLRA Trigger: GGCCCTGAGGAGCCATGACCACAGCACCAAGCCCCT...AGAATAAGCCTGGAGGTCGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCGCAGGGACACTGACTAGCCAGTaGTGGAGGAGGCTGGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: CIPKRARQSCWHRLPTAGTLTSQ*WRRLAA Trigger: GGCTGCCAGCCTCCTCCATCACTGGCTAGTCAGTGT...CCCTGCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGAGCCGAGCCTGGGGCTTTCTCACCATGGGCCTCAACCGGCTTCCCATCTGATCTGGGGACTAGGGTaGGGGCAAGAGACATGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: EEPSLGLSHHGPQPASHLIWGLG*GQETCH Trigger: GTGACATGTCTCTTGCCCTCACCCTAGTCCCCAGAT...CAGATGGGAAGCCGGTTGAGGCCCATGGTGAGAAAGCCCCAGGCTCGGCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAGGGCCAGTGGGTGGATGTGGACACTGCAGGAATGTCCTGCTCGGACACCCTGGGGAGGCTGCCTCCTaGCCCACACTTCATTTACTG | + |
|
Preference number: 2 (lower is better) Translates to: GGPVGGCGHCRNVLLGHPGEAAS*PTLHLL Trigger: CAGTAAATGAAGTGTGGGGCAGGAGGCAGCCTCCCC...AGGGTGTCCGAGCAGGACATTCCTGCAGTGTCCACATCCACCCACTGGCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGGCCAGTGGGTGGATGTGGACACTGCAGGAATGTCCTGCTCGGACACCCTGGGGGAGGCTGCCTCCTaGCCCACACTTCATTTACTG | + |
|
Preference number: 2 (lower is better) Translates to: EGQWVDVDTAGMSCSDTLGEAAS*PTLHLL Trigger: CAGTAAATGAAGTGTGGGGCAGGAGGCAGCCTCCCC...CAGGGTGTCCGAGCAGGACATTCCTGCAGTGTCCACATCCACCCACTGGCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAGAGGTCCGAGTCTTCCTGATGCCCGGTTCCCTCCAACTGCTGGTCCTTCTGCCTTGATCTGCAAGTaGTCCTGGGCCTCCTTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: ARGPSLPDARFPPTAGPSALICK*SWASLG Trigger: CCCCAAGGAGGCCCAGGAGCACTTGCAGATCAAGGC...AGAAGGACCAGCAGTTGGAGGGAACCGGGCATCAGGAAGACTCGGACCTCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGATGGAGGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGCCCCGCTGCATCCTCCTaGAGTTCCATGCACTGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: VMEEAGSHWPTLAHAGLSPAASS*SSMHCC Trigger: GCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGG...GCTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGAGCTACTCTGCCCAGGCTGAGGAGAGTCTGAGTGTTGGAAGGTGCCAAGAGGCTGGCAGCCACTaGCCTACACTGGCCCACGCT | + |
|
Preference number: 2 (lower is better) Translates to: LESYSAQAEESLSVGRCQEAGSH*PTLAHA Trigger: AGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTC...TTGGCACCTTCCAACACTCAGACTCTCCTCAGCCTGGGCAGAGTAGCTCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCAAGACCTGATCCAGGTGCCTCTGCCTGGAGTCCCGGCTCCTGCACTTTATCTGCAGCCCTGCTGTTaGCCTGCCTCAGCAGCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: HQDLIQVPLPGVPAPALYLQPCC*PASAAP Trigger: AGGGGCTGCTGAGGCAGGCCAACAGCAGGGCTGCAG...ATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAGGTCTTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR-3UTR CCA 90 bp | GTGATGGAGGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGCTTGGTGCTGTGGTCATaGCTCCTCAGGGCCATTCCC | + |
|
Preference number: 2 (lower is better) Translates to: VMEEAGSHWPTLAHAGLSLVLWS*LLRAIP Trigger: GGGAATGGCCCTGAGGAGCCATGACCACAGCACCAA...GCTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTGGTGGGTGAGGCGCACAGCGACCTCCAGGCTTATTCTGTGGCCCACAGATTGGTGCTGTGGTCATaGCTCCTCAGGGCCATTCCC | + |
|
Preference number: 2 (lower is better) Translates to: AVVGEAHSDLQAYSVAHRLVLWS*LLRAIP Trigger: GGGAATGGCCCTGAGGAGCCATGACCACAGCACCAA...TCTGTGGGCCACAGAATAAGCCTGGAGGTCGCTGTGCGCCTCACCCACCACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTTGGTCCTTCTGCTCCTaGAAGCCTGGCTCGGGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: GVPCTVASGVWCSTCDCGWSFCS*KPGSGA Trigger: AGCCCCCGAGCCAGGCTTCCAGGAGCAGAAGGACCA...ACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
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| 3UTR-3UTR TCA 90 bp | GCCTGCTCTGTGTGGGGAATGGGAACCAGAGTCCTATTCTATCACCACGGCGACCACCCTCTGTGCAGCTaGCTCCCCATCGCCCACTCT | + |
|
Preference number: 2 (lower is better) Translates to: ACSVWGMGTRVLFYHHGDHPLCS*LPIAHS Trigger: AGAGTGGGCGATGGGGAGTCAGCTGCACAGAGGGTG...GTCGCCGTGGTGATAGAATAGGACTCTGGTTCCCATTCCCCACACAGAGCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCATCAGAGACAGCAGCAGCAGACCTACCCCCAAGGGGTAGTCACTATGCACCCTCTGTGCAGCTaGCTCCCCATCGCCCACTCT | + |
|
Preference number: 2 (lower is better) Translates to: QLHQRQQQQTYPQGVVTMHPLCS*LPIAHS Trigger: AGAGTGGGCGATGGGGAGTCAGCTGCACAGAGGGTG...CATAGTGACTACCCCTTGGGGGTAGGTCTGCTGCTGCTGTCTCTGATGGAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCCCCTTCAAGGCCACCCAGACAAGAAGCCACCAGGCTAGAACAGACCCGCAGTGGGATGGGATTTTaGCGCTCTCTGGTGAGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: AAPSRPPRQEATRLEQTRSGMGF*RSLVRG Trigger: CCCTCTCACCAGAGAGCGTCAAAATCCCATCCCACT...GCGGGTCTGTTCTAGCCTGGTGGCTTCTTGTCTGGGTGGCCTTGAAGGGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTGCTCTGTGTGGGGAATGGGAACCAGAGTCCTATTCTATCACCACGGCGACCCCAGGGAGTGGGGATaGGCCACCAGCTCCATCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ACSVWGMGTRVLFYHHGDPREWG*ATSSIR Trigger: TCTGATGGAGCTGGTGGCTCATCCCCACTCCCTGGG...GTCGCCGTGGTGATAGAATAGGACTCTGGTTCCCATTCCCCACACAGAGCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| 3UTR-3UTR GCA 90 bp | GGTCTGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCGCCCTCCTGGAGTTCCATaGACTGTTGCCTCTGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: GLYSQEGKAELLAQVANRPPGVP*TVASGV Trigger: CACCCCAGAGGCAACAGTGCATGGAACTCCAGGAGG...GCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGTGAGGGCAAGAGACATGTCACAGGCGTGCCATCTCTGTGTCCCAGCTCAGAGGGCAAGGCAGAGCTaGTGGCACAGGTTGCCAACC | + |
|
Preference number: 2 (lower is better) Translates to: RVRARDMSQACHLCVPAQRARQS*WHRLPT Trigger: GGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCT...CTGAGCTGGGACACAGAGATGGCACGCCTGTGACATGTCTCTTGCCCTCACCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAGGTCCGAGTCTTCCTGATGCCCGGTTCCCTCCAACTGCTGGTCCTTCTGTTGCCTCTGGGGTGTaGTGCTCCACCTGTGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: ARGPSLPDARFPPTAGPSVASGV*CSTCDC Trigger: ACAGTCACAGGTGGAGCACCACACCCCAGAGGCAAC...AGAAGGACCAGCAGTTGGAGGGAACCGGGCATCAGGAAGACTCGGACCTCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
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| 3UTR-3UTR CCA 90 bp | TGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCGCAGGGAGTGATGGAGGAGGCTaGCAGCCACTGGCCTACACT | + |
|
Preference number: 2 (lower is better) Translates to: CIPKRARQSCWHRLPTAGSDGGG*QPLAYT Trigger: AGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCACT...CCCTGCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
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| 3UTR-3UTR CCA 90 bp | CGCTGGATTAAGCCCGCTGCATCCTCCTGGAGTTCCATGCACTGTTGCCTCTGGGCAAGGCAGAGCTGCTaGCACAGGTTGCCAACCGCA | + |
|
Preference number: 2 (lower is better) Translates to: RWIKPAASSWSSMHCCLWARQSC*HRLPTA Trigger: TGCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGC...CCAGAGGCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGGCTTAATCCAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGCCAGTGGGTGGATGTGGACACTGCAGGAATGTCCTGCTCGGACACCCTGGATGGCCTTGGCCTCTaGGGCCCTACTTCTCTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: EGQWVDVDTAGMSCSDTLDGLGL*GPTSLN Trigger: GTTTAGAGAAGTAGGGCCCCAGAGGCCAAGGCCATC...CAGGGTGTCCGAGCAGGACATTCCTGCAGTGTCCACATCCACCCACTGGCCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCCTGGTCTGGAATATGGTCCTGCTGGGGCATGGTGACCACACTGACTAGCCGGAACCTACAGCAGTaGTGGGTGAGGCGCACAGCG | + |
|
Preference number: 2 (lower is better) Translates to: ASWSGIWSCWGMVTTLTSRNLQQ*WVRRTA Trigger: CGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCG...GCTAGTCAGTGTGGTCACCATGCCCCAGCAGGACCATATTCCAGACCAGGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGCCGAGCCTGGGGCTTTCTCACCATGGGCCTCAACCGGCTTCCCATCTGCTGGCGTATAGGTTCTaGGATCCGGAACCTACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: EEPSLGLSHHGPQPASHLLAYRF*DPEPTA Trigger: TGCTGTAGGTTCCGGATCCCAGAACCTATACGCCAG...CAGATGGGAAGCCGGTTGAGGCCCATGGTGAGAAAGCCCCAGGCTCGGCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143817.8 |
||
| 3UTR CAA 90 bp | CGCAGGGCCTCTGGGCACCCGAGGCCTGAAGTCCTTCATGTACTCTaGGTGCTTGTGTGTGCTTCCTGGTCTGGAATATGGTCCTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RRASGHPRPEVLHVL*VLVCASWSGIWSCW Trigger: CCAGCAGGACCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTTCAGGCCTCGGGTGCCCAGAGGCCCTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
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| 3UTR CAA 90 bp | TGTGCAGCTGACTCCCCATCGCCCACTCTTGAGCCTGCTCCAGGATaGAGGCTTTCCCAACTGCAGGTCCCTCAAGCTCAGCGGCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: CAADSPSPTLEPAPG*RLSQLQVPQAQRQT Trigger: TGTTTGCCGCTGAGCTTGAGGGACCTGCAGTTGGGAAAGCCTCAATCCTGGAGCAGGCTCAAGAGTGGGCGATGGGGAGTCAGCTGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| 3UTR CAA 90 bp | GCATTCAGGAGGCCTGCCTTGATCTGCAAGTGCTCCTGGGCCTCCTaGGGGGCATGCATTTGGCCTCTGCTCTTTCTGGCTCCTGTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: AFRRPALICKCSWAS*GACIWPLLFLAPVL Trigger: AAGGACAGGAGCCAGAAAGAGCAGAGGCCAAATGCATGCCCCCAAGGAGGCCCAGGAGCACTTGCAGATCAAGGCAGGCCTCCTGAATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGATCCAGGTGCCTCTGCCTGGAGTCCCGGCTCCTGCACTTTATCTTCCCATTACACTGACTAGCCAGTaGTGGAGGAGGCTGGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LIQVPLPGVPAPALYLPITLTSQ*WRRLAA Trigger: GGCTGCCAGCCTCCTCCATCACTGGCTAGTCAGTGT...AATGGGAAGATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR TCA 90 bp | CGGGAGGGGAAGGTGGTCCAGGCTGATATCCTGCTGACTCTGGAGACACTACACCACCCAGAGGCAGAGTaGCTTGGCCAGGCACACTTA | + |
|
Preference number: 2 (lower is better) Translates to: REGKVVQADILLTLETLHHPEAE*LGQAHL Trigger: TAAGTGTGCCTGGCCAAGTCACTCTGCCTCTGGGTG...GTGTAGTGTCTCCAGAGTCAGCAGGATATCAGCCTGGACCACCTTCCCCTCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR GCA 90 bp | GTAAAGCCAGGAAGAACCAGGTCTGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGCTGCTGGCACAGGTTaGCAACCGCAGGGCCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VKPGRTRSVFPRGQGRAAAAGTG*QPQGLW Trigger: CCAGAGGCCCTGCGGTTGGCAACCTGTGCCAGCAGC...AGCAGCTCTGCCTTGCCCTCTTGGGAATACAGACCTGGTTCTTCCTGGCTTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTGAGGTCTCCACTGCTCGCCTCCTTGGGGGCATaGATTTGGCCTCTGCTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LPLGCGAPPVTVVRSPLLASLGA*IWPLLF Trigger: AAAGAGCAGAGGCCAAATGCATGCCCCCAAGGAGGC...GAGCAGTGGAGACCTCACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR GCA 90 bp | GGAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTAACTGCTGGTCCTTCTaGTCCTGGAAGCCTGGCTCG | + |
|
Preference number: 2 (lower is better) Translates to: GVPCTVASGVWCSTCDCGNCWSF*SWKPGS Trigger: CGAGCCAGGCTTCCAGGAGCAGAAGGACCAGCAGTT...ACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCGCAGGGTGTGCTTCCTGGTCTaGAATATGGTCCTGCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LYSQEGKAELLAQVANRRVCFLV*NMVLLG Trigger: CCCCAGCAGGACCATATTCCAGACCAGGAAGCACAC...CCTGCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTCTGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCGCGTGTGCTTCCTGGTCTaGAATATGGTCCTGCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: GLYSQEGKAELLAQVANRVCFLV*NMVLLG Trigger: CCCCAGCAGGACCATATTCCAGACCAGGAAGCACAC...GCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | GACTTAGTAGCTAGCTTCCCCACCATCTGTCACCTCTCCTCCAGGGAATCTGGGGTGAGGAGCCGAGCCTaGGGCTTTCTCACCATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: DLVASFPTICHLSSRESGVRSRA*GFLTMG Trigger: GCCCATGGTGAGAAAGCCCCAGGCTCGGCTCCTCAC...CCCAGATTCCCTGGAGGAGAGGTGACAGATGGTGGGGAAGCTAGCTACTAAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTCCATCAGAGACAGCAGCAGCAGACCTACCCCCAAGGGGTAGTCACTATGATCTGCAAGTGCTCCTaGGCCTCCTTGGGGGCATGC | + |
|
Preference number: 2 (lower is better) Translates to: QLHQRQQQQTYPQGVVTMICKCS*ASLGAC Trigger: GCATGCCCCCAAGGAGGCCCAGGAGCACTTGCAGAT...CATAGTGACTACCCCTTGGGGGTAGGTCTGCTGCTGCTGTCTCTGATGGAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000143817.8 |
||
| 3UTR CAA 90 bp | TGCCTTGATCTGCAAGTGCTCCTGGGCCTCCTTGGGGGCATGCATTaGGCCTCTGCTCTTTCTGGCTCCTGTCCTTTCTCTGTGCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: CLDLQVLLGLLGGMH*ASALSGSCPFSVQE Trigger: CTCCTGCACAGAGAAAGGACAGGAGCCAGAAAGAGCAGAGGCCAAATGCATGCCCCCAAGGAGGCCCAGGAGCACTTGCAGATCAAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR TCA 90 bp | GCGCCTGCTCTGTGTGGGGAATGGGAACCAGAGTCCTATTCTATCACCACGGCGATCTGGGGACTAGGGTaGGGGCAAGAGACATGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: APALCGEWEPESYSITTAIWGLG*GQETCH Trigger: GTGACATGTCTCTTGCCCTCACCCTAGTCCCCAGAT...CGCCGTGGTGATAGAATAGGACTCTGGTTCCCATTCCCCACACAGAGCAGGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGGAGAGCTACTCTGCCCAGGCTGAGGAGAGTCTGAGTGTTGGAAGGTGCCAACCTCCTGGAGTTCCATaGACTGTTGCCTCTGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LESYSAQAEESLSVGRCQPPGVP*TVASGV Trigger: CACCCCAGAGGCAACAGTGCATGGAACTCCAGGAGG...TTGGCACCTTCCAACACTCAGACTCTCCTCAGCCTGGGCAGAGTAGCTCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGAGCCGAGCCTGGGGCTTTCTCACCATGGGCCTCAACCGGCTTCCCATCTGCTTGGTGCTTGTGTGTaGTTCCTGGTCTGGAATATG | + |
|
Preference number: 2 (lower is better) Translates to: EEPSLGLSHHGPQPASHLLGACV*FLVWNM Trigger: CATATTCCAGACCAGGAAGCACACACAAGCACCAAG...CAGATGGGAAGCCGGTTGAGGCCCATGGTGAGAAAGCCCCAGGCTCGGCTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCAGCCCAGTTGGTCGTGTTTGTTCAGCAAGCACAGAGCCTTGGCTTTGATGCTGCTGGCACAGGTTaGCAACCGCAGGGCCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SPAQLVVFVQQAQSLGFDAAGTG*QPQGLW Trigger: CCAGAGGCCCTGCGGTTGGCAACCTGTGCCAGCAGC...ATCAAAGCCAAGGCTCTGTGCTTGCTGAACAAACACGACCAACTGGGCTGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAAAGCCTCAGGCCTATGTTACTCAGGGTTGCCTTGAGCCCATGCCCAGAGACTGGCCGTGGGGTTCTTaGCCATGGAGGCTGGCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: TKPQAYVTQGCLEPMPRDWPWGS*PWRLAY Trigger: ATAGGCCAGCCTCCATGGGCAAGAACCCCACGGCCA...GTCTCTGGGCATGGGCTCAAGGCAACCCTGAGTAACATAGGCCTGAGGCTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR GCA 90 bp | CGGGAGGGGAAGGTGGTCCAGGCTGATATCCTGCTGACTCTGGAGACACTACACATGTTTGTGAGAGACTaGGGAGGGCCAGTGGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: REGKVVQADILLTLETLHMFVRD*GGPVGG Trigger: TCCACCCACTGGCCCTCCGCAGTCTCTCACAAACAT...GTGTAGTGTCTCCAGAGTCAGCAGGATATCAGCCTGGACCACCTTCCCCTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTGCCAAGCTGAGCAGCATCAGGCCTGACTTCTGTGTCTTGGGGAAGGTCTTCAGTGATGGAGGAGGCTaGCAGCCACTGGCCTACACT | + |
|
Preference number: 2 (lower is better) Translates to: GAKLSSIRPDFCVLGKVFSDGGG*QPLAYT Trigger: AGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCACT...GAAGACCTTCCCCAAGACACAGAAGTCAGGCCTGATGCTGCTCAGCTTGGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGCCCGCTGTCCTTCATGTACTCTTaGTGCTTGTGTGTGCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: EEAGSHWPTLAHAGLSPLSFMYS*CLCVLP Trigger: AGGAAGCACACACAAGCACCAAGAGTACATGAAGGA...CAGCGGGCTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTGAGGATGGTCTTAAGGACTGATGGCCTTGGCCTCTGGGGCCCTACTTCTGCAAGGCAGAGCTGCTaGCACAGGTTGCCAACCGCA | + |
|
Preference number: 2 (lower is better) Translates to: SVRMVLRTDGLGLWGPTSARQSC*HRLPTA Trigger: TGCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGC...AGAAGTAGGGCCCCAGAGGCCAAGGCCATCAGTCCTTAAGACCATCCTCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGTCTAAGGAGCATATGGGCTCCCCAGAAGCCAGGAGACAGCAATTGGCTCTACATACCAGGTGTGTaGTGGGGAGGCTGCCTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: WGLRSIWAPQKPGDSNWLYIPGV*WGGCLL Trigger: CAGGAGGCAGCCTCCCCACCACACACCTGGTATGTA...GAGCCAATTGCTGTCTCCTGGCTTCTGGGGAGCCCATATGCTCCTTAGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGATCCAGGTGCCTCTGCCTGGAGTCCCGGCTCCTGCACTTTATCTTCCCATTAGGCGGCTCCAGCCCTaGCAGTCCACCATTCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LIQVPLPGVPAPALYLPIRRLQP*QSTILV Trigger: AACAAGAATGGTGGACTGCCAGGGCTGGAGCCGCCT...AATGGGAAGATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CCA 90 bp | GCGCCTGCTCTGTGTGGGGAATGGGAACCAGAGTCCTATTCTATCACCACGGCGTCAAGAACAGAGACCTaGGGCTGGAGCCCTGTACAG | + |
|
Preference number: 2 (lower is better) Translates to: APALCGEWEPESYSITTASRTET*GWSPVQ Trigger: CTGTACAGGGCTCCAGCCCCAGGTCTCTGTTCTTGA...CGCCGTGGTGATAGAATAGGACTCTGGTTCCCATTCCCCACACAGAGCAGGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTGAGCGGATGTCAGCCTaGCGTATAGGTTCTGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: GVPCTVASGVWCSTCDCGERMSA*RIGSGI Trigger: GATCCCAGAACCTATACGCCAGGCTGACATCCGCTC...ACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR CAA 90 bp | AGCCCTTCAAGGACTCTTCTGAGGAGGCAGGACAGTATGCTCCCATaGGGGTCTAAGGAGCATATGGGCTCCCCAGAAGCCAGGAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: SPSRTLLRRQDSMLP*GSKEHMGSPEARRQ Trigger: CTGTCTCCTGGCTTCTGGGGAGCCCATATGCTCCTTAGACCCCAATGGGAGCATACTGTCCTGCCTCCTCAGAAGAGTCCTTGAAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTGCCAAGCTGAGCAGCATCAGGCCTGACTTCTGTGTCTTGGGGAAGGTCTTCGAGCAGCATCAGGCCTaGCTTCTGTGTCTTGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GAKLSSIRPDFCVLGKVFEQHQA*LLCLGE Trigger: TTCCCCAAGACACAGAAGTCAGGCCTGATGCTGCTC...GAAGACCTTCCCCAAGACACAGAAGTCAGGCCTGATGCTGCTCAGCTTGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGAGCCGAGCCTGGGGCTTTCTCACCATGGGCCTCAACCGGCTTCCCATCTGTTCATGTACTCTTGGTaGTTGTGTGTGCTTCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: EEPSLGLSHHGPQPASHLFMYSW*LCVLPG Trigger: ACCAGGAAGCACACACAAGCACCAAGAGTACATGAA...CAGATGGGAAGCCGGTTGAGGCCCATGGTGAGAAAGCCCCAGGCTCGGCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTCCATCAGAGACAGCAGCAGCAGACCTACCCCCAAGGGGTAGTCACTATGGTGTCCCAGCTCAGATaGCACTCTGGTGAGCCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: QLHQRQQQQTYPQGVVTMVSQLR*HSGEPR Trigger: TCTAGGCTCACCAGAGTGGCATCTGAGCTGGGACAC...CATAGTGACTACCCCTTGGGGGTAGGTCTGCTGCTGCTGTCTCTGATGGAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGAGAGCTACTCTGCCCAGGCTGAGGAGAGTCTGAGTGTTGGAAGGTGCCAAAACAAGGATGCTGTGTaGTGGCCCTCAAGCTCGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LESYSAQAEESLSVGRCQNKDAV*WPSSSA Trigger: AGCCGAGCTTGAGGGCCAGCACACAGCATCCTTGTT...TTGGCACCTTCCAACACTCAGACTCTCCTCAGCCTGGGCAGAGTAGCTCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTGAGGATGGTCTTAAGGACTGATGGCCTTGGCCTCTGGGGCCCTACTTCTAGTGATGGAGGAGGCTaGCAGCCACTGGCCTACACT | + |
|
Preference number: 2 (lower is better) Translates to: SVRMVLRTDGLGLWGPTSSDGGG*QPLAYT Trigger: AGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCACT...AGAAGTAGGGCCCCAGAGGCCAAGGCCATCAGTCCTTAAGACCATCCTCACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTCCATCAGAGACAGCAGCAGCAGACCTACCCCCAAGGGGTAGTCACTATGTCCTGGTCTGGAATATaGTCCTGCTGGGGCATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: QLHQRQQQQTYPQGVVTMSWSGI*SCWGMV Trigger: CACCATGCCCCAGCAGGACCATATTCCAGACCAGGA...CATAGTGACTACCCCTTGGGGGTAGGTCTGCTGCTGCTGTCTCTGATGGAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCTCCTGCCCCACACTTCATTTACTGGGTGACAGAACCACATATCTATCTTCCCTGCAGCCCTGCTGTTaGCCTGCCTCAGCAGCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: ASCPTLHLLGDRTTYLSSLQPCC*PASAAP Trigger: AGGGGCTGCTGAGGCAGGCCAACAGCAGGGCTGCAG...GGAAGATAGATATGTGGTTCTGTCACCCAGTAAATGAAGTGTGGGGCAGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCATTCATCTGCAAGTCAGTGGTCCCGTGCCGCTGTTCTGTGCCTCTGCTTTAGCCTAGAATGTGTGTaGGAGGACAGGGAGGGCACT | + |
|
Preference number: 2 (lower is better) Translates to: GHSSASQWSRAAVLCLCFSLECV*EDREGT Trigger: AGTGCCCTCCCTGTCCTCCCACACACATTCTAGGCT...AAAGCAGAGGCACAGAACAGCGGCACGGGACCACTGACTTGCAGATGAATGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTGCCAAGCTGAGCAGCATCAGGCCTGACTTCTGTGTCTTGGGGAAGGTCTTCGATGGCCTTGGCCTCTaGGGCCCTACTTCTCTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: GAKLSSIRPDFCVLGKVFDGLGL*GPTSLN Trigger: GTTTAGAGAAGTAGGGCCCCAGAGGCCAAGGCCATC...GAAGACCTTCCCCAAGACACAGAAGTCAGGCCTGATGCTGCTCAGCTTGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAGAGCTACTCTGCCCAGGCTGAGGAGAGTCTGAGTGTTGGAAGGTGCCAAGTTGAACAGATGAGATaGGGTGACCAGGCTGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LESYSAQAEESLSVGRCQVEQMR*GDQAGS Trigger: GGACCCAGCCTGGTCACCCCATCTCATCTGTTCAAC...TTGGCACCTTCCAACACTCAGACTCTCCTCAGCCTGGGCAGAGTAGCTCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCAGCCCAGTTGGTCGTGTTTGTTCAGCAAGCACAGAGCCTTGGCTTTGATTGCTGCTGGGGTGAGTaGGCCAGGTGGGTAAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: SPAQLVVFVQQAQSLGFDCCWGE*ARWVSL Trigger: GAGGCTTACCCACCTGGCCCACTCACCCCAGCAGCA...ATCAAAGCCAAGGCTCTGTGCTTGCTGAACAAACACGACCAACTGGGCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTCTGGCGTATAGGTTCTaGGATCCGGAACCTACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GVPCTVASGVWCSTCDCGLAYRF*DPEPTA Trigger: TGCTGTAGGTTCCGGATCCCAGAACCTATACGCCAG...ACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR TCA 90 bp | CATCAAGACCTGATCCAGGTGCCTCTGCCTGGAGTCCCGGCTCCTGCACTTTATTGTCTTGACAGGGCTTaGGAAGGGAGAGGTCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: HQDLIQVPLPGVPAPALYCLDRA*EGRGLE Trigger: TTCCAGACCTCTCCCTTCTCAAGCCCTGTCAAGACA...ATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAGGTCTTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTGCCAAGCTGAGCAGCATCAGGCCTGACTTCTGTGTCTTGGGGAAGGTCTTCTGTCTTGACAGGGCTTaGGAAGGGAGAGGTCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GAKLSSIRPDFCVLGKVFCLDRA*EGRGLE Trigger: TTCCAGACCTCTCCCTTCTCAAGCCCTGTCAAGACA...GAAGACCTTCCCCAAGACACAGAAGTCAGGCCTGATGCTGCTCAGCTTGGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR TCA 90 bp | CACACTCTATGTTCTATCCACCCTGCTCCTTCAGTTTGCATCCCCCTGGCCCTGGAGCAGCATCAGGCCTaGCTTCTGTGTCTTGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: HTLCSIHPAPSVCIPLALEQHQA*LLCLGE Trigger: TTCCCCAAGACACAGAAGTCAGGCCTGATGCTGCTC...CAGGGCCAGGGGGATGCAAACTGAAGGAGCAGGGTGGATAGAACATAGAGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR TCA 90 bp | GACTTAGTAGCTAGCTTCCCCACCATCTGTCACCTCTCCTCCAGGGAATCTGGGATCTTCTCAGGGTGGTaGCTGTACCCAGGCTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: DLVASFPTICHLSSRESGIFSGW*LYPGWR Trigger: TCTCCAGCCTGGGTACAGTCACCACCCTGAGAAGAT...CCCAGATTCCCTGGAGGAGAGGTGACAGATGGTGGGGAAGCTAGCTACTAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143817.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCCCCTTCAAGGCCACCCAGACAAGAAGCCACCAGGCTAGAACAGACCCGCTTCATGTACTCTTGGTaGTTGTGTGTGCTTCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: AAPSRPPRQEATRLEQTRFMYSW*LCVLPG Trigger: ACCAGGAAGCACACACAAGCACCAAGAGTACATGAA...GCGGGTCTGTTCTAGCCTGGTGGCTTCTTGTCTGGGTGGCCTTGAAGGGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGATCCAGGTGCCTCTGCCTGGAGTCCCGGCTCCTGCACTTTATCTTCCCATTTGGGGTTCTTGCCCATaGAGGCTGGCCTATACATAC | + |
|
Preference number: 2 (lower is better) Translates to: LIQVPLPGVPAPALYLPIWGSCP*RLAYTY Trigger: GTATGTATAGGCCAGCCTCCATGGGCAAGAACCCCA...AATGGGAAGATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTGAGGATGGTCTTAAGGACTGATGGCCTTGGCCTCTGGGGCCCTACTTCTGCCAGTGGGTGGATGTaGACACTGCAGGAATGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SVRMVLRTDGLGLWGPTSASGWM*TLQECP Trigger: AGGACATTCCTGCAGTGTCCACATCCACCCACTGGC...AGAAGTAGGGCCCCAGAGGCCAAGGCCATCAGTCCTTAAGACCATCCTCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCAGCCCAGTTGGTCGTGTTTGTTCAGCAAGCACAGAGCCTTGGCTTTGATACTGCGGAGGGCCAGTaGGTGGATGTGGACACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SPAQLVVFVQQAQSLGFDTAEGQ*VDVDTA Trigger: TGCAGTGTCCACATCCACCCACTGGCCCTCCGCAGT...ATCAAAGCCAAGGCTCTGTGCTTGCTGAACAAACACGACCAACTGGGCTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCTGCTCTGTGTGGGGAATGGGAACCAGAGTCCTATTCTATCACCACGGCGACGAGAAGGGAGAGGTCTaGAAGTTGGGAAGGCAGATG | + |
|
Preference number: 2 (lower is better) Translates to: ACSVWGMGTRVLFYHHGDEKGEV*KLGRQM Trigger: CATCTGCCTTCCCAACTTCCAGACCTCTCCCTTCTC...GTCGCCGTGGTGATAGAATAGGACTCTGGTTCCCATTCCCCACACAGAGCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR TCA 90 bp | GCGCCTGCTCTGTGTGGGGAATGGGAACCAGAGTCCTATTCTATCACCACGGCGATTCTTGTTGTCCCATaGGCAGGAAATGGGGATGAC | + |
|
Preference number: 2 (lower is better) Translates to: APALCGEWEPESYSITTAILVVP*AGNGDD Trigger: GTCATCCCCATTTCCTGCTCATGGGACAACAAGAAT...CGCCGTGGTGATAGAATAGGACTCTGGTTCCCATTCCCCACACAGAGCAGGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCGCAGGGTTCATGTACTCTTGGTaGTTGTGTGTGCTTCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: CIPKRARQSCWHRLPTAGFMYSW*LCVLPG Trigger: ACCAGGAAGCACACACAAGCACCAAGAGTACATGAA...CCCTGCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGACTTAGTAGCTAGCTTCCCCACCATCTGTCACCTCTCCTCCAGGGAATCTGTGTGCTTCCTGGTCTaGAATATGGTCCTGCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: QDLVASFPTICHLSSRESVCFLV*NMVLLG Trigger: CCCCAGCAGGACCATATTCCAGACCAGGAAGCACAC...AGATTCCCTGGAGGAGAGGTGACAGATGGTGGGGAAGCTAGCTACTAAGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTCTGGAATATGGTCCTACACTGACTAGCCAGTaGTGGAGGAGGCTGGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: SFMYSWCLCVLPGLEYGPTLTSQ*WRRLAA Trigger: GGCTGCCAGCCTCCTCCATCACTGGCTAGTCAGTGT...AGGACCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTCCACAAGAGTGTCAGGGAATATGAAGAGAGAGAGAGAGAGAGTGTGTATAGGCACCTTGGGGGCTaGAGCCTGGCTATGACACGG | + |
|
Preference number: 2 (lower is better) Translates to: GFHKSVREYEERERESVYRHLGG*SLAMTR Trigger: CCGTGTCATAGCCAGGCTGCAGCCCCCAAGGTGCCT...ATACACACTCTCTCTCTCTCTCTCTTCATATTCCCTGACACTCTTGTGGAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCAGCCCAGTTGGTCGTGTTTGTTCAGCAAGCACAGAGCCTTGGCTTTGATGCCCTCAAGCTCGGCTaGCTTACTTCTCACCTCACA | + |
|
Preference number: 2 (lower is better) Translates to: SPAQLVVFVQQAQSLGFDALKLG*LTSHLT Trigger: TGTGAGGTGAGAAGTAAGGCAGCCGAGCTTGAGGGC...ATCAAAGCCAAGGCTCTGTGCTTGCTGAACAAACACGACCAACTGGGCTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR GCA 90 bp | GGCCATTCATCTGCAAGTCAGTGGTCCCGTGCCGCTGTTCTGTGCCTCTGCTTTCTATTTTTAAGGTTCTaGGGGAAGGAGCTGAGACGC | + |
|
Preference number: 2 (lower is better) Translates to: GHSSASQWSRAAVLCLCFLFLRF*GKELRR Trigger: GCGTCTCAGCTCCTTCCCGCAGAACCTTAAAAATAG...AAAGCAGAGGCACAGAACAGCGGCACGGGACCACTGACTTGCAGATGAATGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCATCTGCAAGTCAGTGGTCCCGTGCCGCTGTTCTGTGCCTCTGCTTTTAATTCCCGCTGCATCCTCCTaGAGTTCCATGCACTGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: FICKSVVPCRCSVPLLLIPAASS*SSMHCC Trigger: GCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGG...AATTAAAAGCAGAGGCACAGAACAGCGGCACGGGACCACTGACTTGCAGATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTGAGGGCAAGAGACATGTCACAGGCGTGCCATCTCTGTGTCCCAGCTCAGTCCTTCATGTACTCTTaGTGCTTGTGTGTGCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RVRARDMSQACHLCVPAQSFMYS*CLCVLP Trigger: AGGAAGCACACACAAGCACCAAGAGTACATGAAGGA...CTGAGCTGGGACACAGAGATGGCACGCCTGTGACATGTCTCTTGCCCTCACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTGTCCTTCATGTACTCTTaGTGCTTGTGTGTGCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: EFHALLPLGCGAPPVTVVSFMYS*CLCVLP Trigger: AGGAAGCACACACAAGCACCAAGAGTACATGAAGGA...CACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR CCA 90 bp | CGTGCCATCTCTGTGTCCCAGCTCAGATGCCACTCTGGTGAGCCTAGAATGTGTGCCTTCTTAGTGGGATaGGATTTTGACGCTCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RAISVSQLRCHSGEPRMCAFLVG*DFDALW Trigger: CCAGAGAGCGTCAAAATCCCATCCCACTAAGAAGGC...ACACATTCTAGGCTCACCAGAGTGGCATCTGAGCTGGGACACAGAGATGGCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCATCTGCAAGTCAGTGGTCCCGTGCCGCTGTTCTGTGCCTCTGCTTTTAATTTGCACAGAATGTTTGTaGGAGACTGCGGAGGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: FICKSVVPCRCSVPLLLICTECL*ETAEGQ Trigger: CTGGCCCTCCGCAGTCTCTCACAAACATTCTGTGCA...AATTAAAAGCAGAGGCACAGAACAGCGGCACGGGACCACTGACTTGCAGATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTCCAGCCCAGTTGGTCGTGTTTGTTCAGCAAGCACAGAGCCTTGGCTTTGATTCCACAACTCTGTCTTaGCAGGGCTTGAGAAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SPAQLVVFVQQAQSLGFDSTTLS*QGLRRE Trigger: CTCCCTTCTCAAGCCCTGTCAAGACAGAGTTGTGGA...ATCAAAGCCAAGGCTCTGTGCTTGCTGAACAAACACGACCAACTGGGCTGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCATCTGCAAGTCAGTGGTCCCGTGCCGCTGTTCTGTGCCTCTGCTTTTAATTGAGCAGCATCAGGCCTaGCTTCTGTGTCTTGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: FICKSVVPCRCSVPLLLIEQHQA*LLCLGE Trigger: TTCCCCAAGACACAGAAGTCAGGCCTGATGCTGCTC...AATTAAAAGCAGAGGCACAGAACAGCGGCACGGGACCACTGACTTGCAGATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR GCA 90 bp | CACACTCTATGTTCTATCCACCCTGCTCCTTCAGTTTGCATCCCCCTGGCCCTGCTTGGTGCTTGTGTGTaGTTCCTGGTCTGGAATATG | + |
|
Preference number: 2 (lower is better) Translates to: HTLCSIHPAPSVCIPLALLGACV*FLVWNM Trigger: CATATTCCAGACCAGGAAGCACACACAAGCACCAAG...CAGGGCCAGGGGGATGCAAACTGAAGGAGCAGGGTGGATAGAACATAGAGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTCTGGAATATGGTCAGTGATGGAGGAGGCTaGCAGCCACTGGCCTACACT | + |
|
Preference number: 2 (lower is better) Translates to: SPSCTLGACVCFLVWNMVSDGGG*QPLAYT Trigger: AGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCACT...GACCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCATCTGCAAGTCAGTGGTCCCGTGCCGCTGTTCTGTGCCTCTGCTTTTAATTTGTCTTGACAGGGCTTaGGAAGGGAGAGGTCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: FICKSVVPCRCSVPLLLICLDRA*EGRGLE Trigger: TTCCAGACCTCTCCCTTCTCAAGCCCTGTCAAGACA...AATTAAAAGCAGAGGCACAGAACAGCGGCACGGGACCACTGACTTGCAGATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR GCA 90 bp | CACACCAGAAGAGGGTATCAGATCCCATTACAGATGGTTGTGAGCCAACATGTGGCAGCTAGTTTAGGTTaGCTCCCCCTGGAAGCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: HTRRGYQIPLQMVVSQHVAASLG*LPLEAN Trigger: GTTGGCTTCCAGGGGGAGGCAACCTAAACTAGCTGC...CACATGTTGGCTCACAACCATCTGTAATGGGATCTGATACCCTCTTCTGGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTGACCCATGAGGGTAAAGCCAGGAAGAACCAGGTCTGTATTCCCAAGAGGGCCTTCTTAGTGGGATaGGATTTTGACGCTCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RVTHEGKARKNQVCIPKRAFLVG*DFDALW Trigger: CCAGAGAGCGTCAAAATCCCATCCCACTAAGAAGGC...CCTCTTGGGAATACAGACCTGGTTCTTCCTGGCTTTACCCTCATGGGTCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTCCACAAGAGTGTCAGGGAATATGAAGAGAGAGAGAGAGAGAGTGTGTATGAGAGGTCTGGAAGTTaGGAAGGCAGATGGTGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: GFHKSVREYEERERESVYERSGS*EGRWWG Trigger: GCCCCACCATCTGCCTTCCCAACTTCCAGACCTCTC...ATACACACTCTCTCTCTCTCTCTCTTCATATTCCCTGACACTCTTGTGGAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAGCCTCAGGCCTATGTTACTCAGGGTTGCCTTGAGCCCATGCCCAGAGACCTGACTTCTGTGTCTTaGGGAAGGTCTTCTGTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: TKPQAYVTQGCLEPMPRDLTSVS*GRSSVK Trigger: CTTAACAGAAGACCTTCCCCAAGACACAGAAGTCAG...GTCTCTGGGCATGGGCTCAAGGCAACCCTGAGTAACATAGGCCTGAGGCTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTCTGGAATATGGTCCTGTTCCCTCCAACTGCTaGTCCTTCTGCTCCTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SFMYSWCLCVLPGLEYGPVPSNC*SFCSWK Trigger: CTTCCAGGAGCAGAAGGACCAGCAGTTGGAGGGAAC...AGGACCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR TCA 90 bp | AGACACACCAGAAGAGGGTATCAGATCCCATTACAGATGGTTGTGAGCCAACATGACTGGGGTCCTGAGTaGCAGACACAGCAGCTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: RHTRRGYQIPLQMVVSQHDWGPE*QTQQLV Trigger: AACTAGCTGCTGTGTCTGTCACTCAGGACCCCAGTC...ATGTTGGCTCACAACCATCTGTAATGGGATCTGATACCCTCTTCTGGTGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCATCTGCAAGTCAGTGGTCCCGTGCCGCTGTTCTGTGCCTCTGCTTTTAATTAGCAATTGGCTCTCTTaGGGTGTTGAGGAAGGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: FICKSVVPCRCSVPLLLISNWLS*GVEEGS Trigger: TGACCCTTCCTCAACACCTCAAGAGAGCCAATTGCT...AATTAAAAGCAGAGGCACAGAACAGCGGCACGGGACCACTGACTTGCAGATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR GCA 90 bp | CACACCAGAAGAGGGTATCAGATCCCATTACAGATGGTTGTGAGCCAACATGTGGCCCCACCCCAGACTTaGCCACACTCTATGTTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: HTRRGYQIPLQMVVSQHVAPPQT*PHSMFY Trigger: ATAGAACATAGAGTGTGGGCAAGTCTGGGGTGGGGC...CACATGTTGGCTCACAACCATCTGTAATGGGATCTGATACCCTCTTCTGGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTAAGAGTGACCCATGAGGGTAAAGCCAGGAAGAACCAGGTCTGTATTCCCGCCTTCTTAGTGGGATaGGATTTTGACGCTCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: EVRVTHEGKARKNQVCIPAFLVG*DFDALW Trigger: CCAGAGAGCGTCAAAATCCCATCCCACTAAGAAGGC...GGGAATACAGACCTGGTTCTTCCTGGCTTTACCCTCATGGGTCACTCTTACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CCA 90 bp | CACACCAGAAGAGGGTATCAGATCCCATTACAGATGGTTGTGAGCCAACATGTGGCTGACAGGCCCTTGTaGGTATGGGAGAGTACTAGA | + |
|
Preference number: 2 (lower is better) Translates to: HTRRGYQIPLQMVVSQHVADRPL*VWESTR Trigger: TCTAGTACTCTCCCATACCCACAAGGGCCTGTCAGC...CACATGTTGGCTCACAACCATCTGTAATGGGATCTGATACCCTCTTCTGGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR GCA 90 bp | AGACACACCAGAAGAGGGTATCAGATCCCATTACAGATGGTTGTGAGCCAACATCTGAGTGTTGGAAGGTaGCAAGCTGAGCAGCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: RHTRRGYQIPLQMVVSQHLSVGR*QAEQHQ Trigger: CTGATGCTGCTCAGCTTGGCACCTTCCAACACTCAG...ATGTTGGCTCACAACCATCTGTAATGGGATCTGATACCCTCTTCTGGTGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTCCACAAGAGTGTCAGGGAATATGAAGAGAGAGAGAGAGAGAGTGTGTATTGGTTCGAGCTATTGTaGTTGAGCTTCAGCCTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: GFHKSVREYEERERESVYWFELL*LSFSLF Trigger: GAAAAGGCTGAAGCTCAACCACAATAGCTCGAACCA...ATACACACTCTCTCTCTCTCTCTCTTCATATTCCCTGACACTCTTGTGGAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCACTTAGGGCCCCCTGCCCTCAAGCACCGGTGTCTGGGGTGTCTGAACGCCTTGAGGACAGGCACCTaGGGGGCTGCAGCCTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: LHLGPPALKHRCLGCLNALRTGT*GAAAWL Trigger: TAGCCAGGCTGCAGCCCCCAAGGTGCCTGTCCTCAA...GGCGTTCAGACACCCCAGACACCGGTGCTTGAGGGCAGGGGGCCCTAAGTGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR TCA 72 bp | CTGCTCCTGGAAGCCTGGCTCGGGGGCTTTCCGGTCTaGGCTGGAGTCTCTGCCGTCGCATTCAGGAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLLEAWLGGFPV*AGVSAVAFRRP Trigger: AGGCCTCCTGAATGCGACGGCAGAGACTCCAGCTCAGACCGGAAAGCCCCCGAGCCAGGCTTCCAGGAGCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR GCA 72 bp | GGCCAGTGGGTGGATGTGGACACTGCAGGAATGTCCTaGTCGGACACCCTGGGTGGCCGTGGGGTTCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GQWVDVDTAGMS*SDTLGGRGVLA Trigger: GGCAAGAACCCCACGGCCACCCAGGGTGTCCGAGCAGGACATTCCTGCAGTGTCCACATCCACCCACTGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR GCA 72 bp | AGAGACTGCGGAGGGCCAGTGGGTGGATGTGGACACTaGAGGAATGTCCTGCTCGGACACCCTGGGTGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: RDCGGPVGGCGH*RNVLLGHPGWP Trigger: CGGCCACCCAGGGTGTCCGAGCAGGACATTCCTGCAGTGTCCACATCCACCCACTGGCCCTCCGCAGTCTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR CCA 72 bp | TGCCCGGTTCCCTCCAACTGCTGGTCCTTCTGCTCCTaGAAGCCTGGCTCGGGGGCTTTCCGGTCTGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CPVPSNCWSFCS*KPGSGAFRSEL Trigger: CAGCTCAGACCGGAAAGCCCCCGAGCCAGGCTTCCAGGAGCAGAAGGACCAGCAGTTGGAGGGAACCGGGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR CCA 72 bp | GGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTaGATTAAGCCCGCTGCATCCTCCTGGAGTTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: GGWQPLAYTGPR*IKPAASSWSSM Trigger: CATGGAACTCCAGGAGGATGCAGCGGGCTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR CCA 72 bp | CAGGTCTGTATTCCCAAGAGGGCAAGGCAGAGCTGCTaGCACAGGTTGCCAACCGCAGGGCCTCTGGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: QVCIPKRARQSC*HRLPTAGPLGT Trigger: GGTGCCCAGAGGCCCTGCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACAGACCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
||
| 3UTR CCA 72 bp | ACCCTGGGTGGCCGTGGGGTTCTTGCCCATGGAGGCTaGCCTATACATACCAGGTGTGTGGTGGGGAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TLGGRGVLAHGG*PIHTRCVVGRL Trigger: CAGCCTCCCCACCACACACCTGGTATGTATAGGCCAGCCTCCATGGGCAAGAACCCCACGGCCACCCAGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR CCA 72 bp | CTCGGACACCCTGGGTGGCCGTGGGGTTCTTGCCCATaGAGGCTGGCCTATACATACCAGGTGTGTGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LGHPGWPWGSCP*RLAYTYQVCGG Trigger: CCCACCACACACCTGGTATGTATAGGCCAGCCTCCATGGGCAAGAACCCCACGGCCACCCAGGGTGTCCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR TCA 72 bp | TCCTGCTGGGGCATGGTGACCACACTGACTAGCCAGTaGTGGAGGAGGCTGGCAGCCACTGGCCTACACTGG | + |
|
Preference number: 3 (lower is better) Translates to: SCWGMVTTLTSQ*WRRLAATGLHW Trigger: CCAGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCACTGGCTAGTCAGTGTGGTCACCATGCCCCAGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR TCA 72 bp | CAGGCTGGAGAAGGAGGCCAGAGGTCCGAGTCTTCCTaGTGCCCGGTTCCCTCCAACTGCTGGTCCTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QAGEGGQRSESS*CPVPSNCWSFC Trigger: GCAGAAGGACCAGCAGTTGGAGGGAACCGGGCATCAGGAAGACTCGGACCTCTGGCCTCCTTCTCCAGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR GCA 72 bp | AACCAGGTCTGTATTCCCAAGAGGGCAAGGCAGAGCTaGTGGCACAGGTTGCCAACCGCAGGGCCTCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: NQVCIPKRARQS*WHRLPTAGPLG Trigger: GCCCAGAGGCCCTGCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACAGACCTGGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR GCA 72 bp | TCCTCAGTATGTGGGGAGTGGGCCCCTGGCAGTGTCTaGCTGTACAGCAGCCTGGAGAGCTACTCTGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSVCGEWAPGSV*LYSSLESYSAQ Trigger: CTGGGCAGAGTAGCTCTCCAGGCTGCTGTACAGGCAGACACTGCCAGGGGCCCACTCCCCACATACTGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR GCA 72 bp | CTGAGCTGGAGTCTCTGCCGTCGCATTCAGGAGGCCTaGCTTGATCTGCAAGTGCTCCTGGGCCTCCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LSWSLCRRIQEA*LDLQVLLGLLG Trigger: CCCAAGGAGGCCCAGGAGCACTTGCAGATCAAGGCAGGCCTCCTGAATGCGACGGCAGAGACTCCAGCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR GCA 72 bp | CTGGCTCGGGGGCTTTCCGGTCTGAGCTGGAGTCTCTaGCGTCGCATTCAGGAGGCCTGCCTTGATCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LARGLSGLSWSL*RRIQEACLDLQ Trigger: TTGCAGATCAAGGCAGGCCTCCTGAATGCGACGGCAGAGACTCCAGCTCAGACCGGAAAGCCCCCGAGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGATCCAGGTGCCTCTGCCTGGAGTCCCGGCTCCTGCACTTTATCTTCCCATTCCCTGCTCCTTCAGTTaGCATCCCCCTGGCCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LIQVPLPGVPAPALYLPIPCSFS*HPPGPG Trigger: GCCAGGGCCAGGGGGATGCAAACTGAAGGAGCAGGG...AATGGGAAGATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGCCAGTGGGTGGATGTGGACACTGCAGGAATGTCCTGCTCGGACACCCTGCTTGGGGGCATGCATTaGGCCTCTGCTCTTTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: EGQWVDVDTAGMSCSDTLLGGMH*ASALSG Trigger: GCCAGAAAGAGCAGAGGCCAAATGCATGCCCCCAAG...CAGGGTGTCCGAGCAGGACATTCCTGCAGTGTCCACATCCACCCACTGGCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143817.8 |
||
| 3UTR TCA 72 bp | AGCCCAAGCCCAAACTACACCCTCTCCATCAAGACCTaGTCCAGGTGCCTCTGCCTGGAGTCCCGGCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SPSPNYTLSIKT*SRCLCLESRLL Trigger: CAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAGGTCTTGATGGAGAGGGTGTAGTTTGGGCTTGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR GCA 72 bp | GCGGCAAACAAGCTTGAGGACAGGCACCTTGGGGGCTaGAGCCTGGCTATGACACGGATGACAGTCTCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: AANKLEDRHLGG*SLAMTRMTVSR Trigger: ACGGGAGACTGTCATCCGTGTCATAGCCAGGCTGCAGCCCCCAAGGTGCCTGTCCTCAAGCTTGTTTGCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR GCA 72 bp | TTAGGGCAGTGCAGTGGGGATGCTGGATTGGGTTGCTaGTGGGGTGAGTGGGCCAGGTGGGTAAGCCTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: LGQCSGDAGLGC*WGEWARWVSLY Trigger: GTAGAGGCTTACCCACCTGGCCCACTCACCCCAGCAGCAACCCAATCCAGCATCCCCACTGCACTGCCCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR GCA 72 bp | GTCTCTGCCGTCGCATTCAGGAGGCCTGCCTTGATCTaGAAGTGCTCCTGGGCCTCCTTGGGGGCATGCATT | + |
|
Preference number: 3 (lower is better) Translates to: VSAVAFRRPALI*KCSWASLGACI Trigger: AATGCATGCCCCCAAGGAGGCCCAGGAGCACTTGCAGATCAAGGCAGGCCTCCTGAATGCGACGGCAGAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR CCA 72 bp | ACTGGCCCACGCTGGATTAAGCCCGCTGCATCCTCCTaGAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TGPRWIKPAASS*SSMHCCLWGVV Trigger: CACCACACCCCAGAGGCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGGCTTAATCCAGCGTGGGCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR CCA 72 bp | GGGAGTCGCAGCAGCCCAGCTGAGTCTAAATGGGCCTaGGTATCACAGGAGAACCACCCGTCTGTCCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GSRSSPAESKWA*VSQENHPSVLP Trigger: GGGAAGGACAGACGGGTGGTTCTCCTGTGATACCCAGGCCCATTTAGACTCAGCTGGGCTGCTGCGACTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR CCA 72 bp | AGATGGGGTGACCAGGCTGGGTCCCCAGCCACACTTTaGTGTCTCACAGGAGTGGGAGGAGCTACCTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RWGDQAGSPATL*CLTGVGGATCS Trigger: TGAGCAGGTAGCTCCTCCCACTCCTGTGAGACACCAAAGTGTGGCTGGGGACCCAGCCTGGTCACCCCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR CCA 72 bp | CATGATGGCTTGGGCCTCTCTCCTCAGGGTTGGCCATaGCTAGATCATAGTAGGCGGCTCCAGCCCTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HDGLGLSPQGWP*LDHSRRLQPWQ Trigger: CTGCCAGGGCTGGAGCCGCCTACTATGATCTAGCCATGGCCAACCCTGAGGAGAGAGGCCCAAGCCATCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR CCA 72 bp | CTCTCGAGAGCGGATGTCAGCCTGGCGTATAGGTTCTaGGATCCGGAACCTACAGCAGTGGTGGGTGAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: LSRADVSLAYRF*DPEPTAVVGEA Trigger: CGCCTCACCCACCACTGCTGTAGGTTCCGGATCCCAGAACCTATACGCCAGGCTGACATCCGCTCTCGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
||
| 3UTR TCA 72 bp | GTGGGGGAGGGTCCAGCACACAGTGGGTGTAGTGATTaGTGGGGGAGGGTCCAGCACACTATGGGTGTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VGEGPAHSGCSD*WGRVQHTMGVV Trigger: CACTACACCCATAGTGTGCTGGACCCTCCCCCATCAATCACTACACCCACTGTGTGCTGGACCCTCCCCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| 3UTR GCA 72 bp | CCTGGAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTaGTCCACCTGTGACTGTGGTGAGGTCTCCACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PGVPCTVASGVW*STCDCGEVSTA Trigger: AGCAGTGGAGACCTCACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR GCA 72 bp | GGGACTAGGGTGAGGGCAAGAGACATGTCACAGGCGTaGCATCTCTGTGTCCCAGCTCAGATGCCACTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GTRVRARDMSQA*HLCVPAQMPLW Trigger: CCAGAGTGGCATCTGAGCTGGGACACAGAGATGGCACGCCTGTGACATGTCTCTTGCCCTCACCCTAGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR GCA 72 bp | CCCCAGACTTGCCCACACTCTATGTTCTATCCACCCTaGTCCTTCAGTTTGCATCCCCCTGGCCCTGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: PQTCPHSMFYPP*SFSLHPPGPGT Trigger: GGTGCCAGGGCCAGGGGGATGCAAACTGAAGGAGCAGGGTGGATAGAACATAGAGTGTGGGCAAGTCTGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR CCA 72 bp | GGGGAGGGTCCAGCACACTGTGGGTGTAGTGATCGATaGGGGAGGGTTCAGCACACTGTGGGTGTAGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: GEGPAHCGCSDR*GRVQHTVGVVI Trigger: GATCACTACACCCACAGTGTGCTGAACCCTCCCCCATCGATCACTACACCCACAGTGTGCTGGACCCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| 3UTR CCA 72 bp | CCTCCTGGAGTTCCATGCACTGTTGCCTCTGGGGTGTaGTGCTCCACCTGTGACTGTGGTGAGGTCTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: PPGVPCTVASGV*CSTCDCGEVST Trigger: AGTGGAGACCTCACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTCCAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR CAA 90 bp | CGCTGGATTAAGCCCGCTGCATCCTCCTGGAGTTCCATGCACTGTTGCCTCTGGCTTGGGGGCATGCATTaGGCCTCTGCTCTTTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: RWIKPAASSWSSMHCCLWLGGMH*ASALSG Trigger: GCCAGAAAGAGCAGAGGCCAAATGCATGCCCCCAAG...CCAGAGGCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGGCTTAATCCAGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAGCCTCAGGCCTATGTTACTCAGGGTTGCCTTGAGCCCATGCCCAGAGACTGCTCCTGGGCCTCCTaGGGGGCATGCATTTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TKPQAYVTQGCLEPMPRDCSWAS*GACIWP Trigger: AGGCCAAATGCATGCCCCCAAGGAGGCCCAGGAGCA...GTCTCTGGGCATGGGCTCAAGGCAACCCTGAGTAACATAGGCCTGAGGCTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143817.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTGATGGAGGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAGTCCTTCATGTACTCTaGGTGCTTGTGTGTGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PVMEEAGSHWPTLAHAGLVLHVL*VLVCAS Trigger: GGAAGCACACACAAGCACCAAGAGTACATGAAGGAC...TAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR TCA 72 bp | CTGTCACCTCTCCTCCAGGGAATCTGGGGACTAGGGTaGGGGCAAGAGACATGTCACAGGCGTGCCATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSPLLQGIWGLG*GQETCHRRAIS Trigger: AGAGATGGCACGCCTGTGACATGTCTCTTGCCCTCACCCTAGTCCCCAGATTCCCTGGAGGAGAGGTGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR TCA 72 bp | GTGTCTCACAGGAGTGGGAGGAGCTACCTGCTCAGGTaGGGCCTGGACAGGGGACTCTGTAAGCTGTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VSHRSGRSYLLR*GLDRGLCKLFS Trigger: GGAAAACAGCTTACAGAGTCCCCTGTCCAGGCCTCACCTGAGCAGGTAGCTCCTCCCACTCCTGTGAGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR GCA 72 bp | ACACTTTGGTGTCTCACAGGAGTGGGAGGAGCTACCTaGTCAGGTGAGGCCTGGACAGGGGACTCTGTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TLWCLTGVGGAT*SGEAWTGDSVS Trigger: GCTTACAGAGTCCCCTGTCCAGGCCTCACCTGAGCAGGTAGCTCCTCCCACTCCTGTGAGACACCAAAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR GCA 72 bp | CTCAGGCCTATGTTACTCAGGGTTGCCTTGAGCCCATaGCCAGAGACTCTGGTCTCAGGCTCCCCAGACACT | + |
|
Preference number: 3 (lower is better) Translates to: LRPMLLRVALSP*PETLVSGSPDT Trigger: AGTGTCTGGGGAGCCTGAGACCAGAGTCTCTGGGCATGGGCTCAAGGCAACCCTGAGTAACATAGGCCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR GCA 72 bp | CAAGAACAGAGACCTGGGGCTGGAGCCCTGTACAGATaGAATCCCCAGGTCTCAACCCGAGACCTAGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QEQRPGAGALYR*NPQVSTRDLAL Trigger: AAGGGCTAGGTCTCGGGTTGAGACCTGGGGATTGCATCTGTACAGGGCTCCAGCCCCAGGTCTCTGTTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR CCA 72 bp | GGGGAGGGTTCAGCACACTGTGGGTGTAGTGATCGATaGGGGAGGGTTCAGCACACTGTGGGTGTAGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: GEGSAHCGCSDR*GRVQHTVGVVI Trigger: GATCACTACACCCACAGTGTGCTGAACCCTCCCCCATCGATCACTACACCCACAGTGTGCTGAACCCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| 3UTR CCA 72 bp | GGGGAGGGTCCAGCACACTATGGGTGTAGTGATCGATaGGGGAGGGTTCAGCACACTGTGGGTGTAGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: GEGPAHYGCSDR*GRVQHTVGVVI Trigger: GATCACTACACCCACAGTGTGCTGAACCCTCCCCCATCGATCACTACACCCATAGTGTGCTGGACCCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| 3UTR CCA 72 bp | TTAGGAGGGAGTCGCAGCAGCCCAGCTGAGTCTAAATaGGCCTGGGTATCACAGGAGAACCACCCGTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LGGSRSSPAESK*AWVSQENHPSV Trigger: GACAGACGGGTGGTTCTCCTGTGATACCCAGGCCCATTTAGACTCAGCTGGGCTGCTGCGACTCCCTCCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR CCA 72 bp | CTTTATCTTCCCATTTCCCAGGAGCCTTTAAGGACCTaGAGCAGCGGGCGCCTGCTCTGTGTGGGGAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: LYLPISQEPLRT*SSGRLLCVGNG Trigger: CCCATTCCCCACACAGAGCAGGCGCCCGCTGCTCCAGGTCCTTAAAGGCTCCTGGGAAATGGGAAGATAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR CCA 72 bp | CGTATAGGTTCTGGGATCCGGAACCTACAGCAGTGGTaGGTGAGGCGCACAGCGACCTCCAGGCTTATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RIGSGIRNLQQW*VRRTATSRLIL Trigger: CAGAATAAGCCTGGAGGTCGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCGGATCCCAGAACCTATACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
||
| 3UTR CCA 72 bp | TGGCGTATAGGTTCTGGGATCCGGAACCTACAGCAGTaGTGGGTGAGGCGCACAGCGACCTCCAGGCTTATT | + |
|
Preference number: 3 (lower is better) Translates to: WRIGSGIRNLQQ*WVRRTATSRLI Trigger: AATAAGCCTGGAGGTCGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCGGATCCCAGAACCTATACGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGATGGAGGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGGTCCTTCATGTACTCTaGGTGCTTGTGTGTGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SDGGGWQPLAYTGPRWIKVLHVL*VLVCAS Trigger: GGAAGCACACACAAGCACCAAGAGTACATGAAGGAC...CTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCCTGCCCCACACTTCATTTACTGGGTGACAGAACCACATATCTATCTTCCGTGGCCGTGGGGTTCTaGCCCATGGAGGCTGGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: ASCPTLHLLGDRTTYLSSVAVGF*PMEAGL Trigger: TAGGCCAGCCTCCATGGGCAAGAACCCCACGGCCAC...GGAAGATAGATATGTGGTTCTGTCACCCAGTAAATGAAGTGTGGGGCAGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGATCCAGGTGCCTCTGCCTGGAGTCCCGGCTCCTGCACTTTATCTTCCCATTGGCTCTCTTGAGGTGTaGAGGAAGGGTCAAGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LIQVPLPGVPAPALYLPIGSLEV*RKGQGS Trigger: GGAACCTTGACCCTTCCTCAACACCTCAAGAGAGCC...AATGGGAAGATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR TCA 72 bp | CTCGGGAGGGGAAGGTGGTCCAGGCTGATATCCTGCTaGCTCTGGAGACACTACACCCACCATCTCACTATC | + |
|
Preference number: 3 (lower is better) Translates to: LGRGRWSRLISC*LWRHYTHHLTI Trigger: GATAGTGAGATGGTGGGTGTAGTGTCTCCAGAGTCAGCAGGATATCAGCCTGGACCACCTTCCCCTCCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR GCA 72 bp | GGTTGTGTGTGTGTGCACAGAATGTTTGTGAGAGACTaGGGAGGGCCAGTGGGTGGATGTGGACACTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GCVCVHRMFVRD*GGPVGGCGHCR Trigger: CCTGCAGTGTCCACATCCACCCACTGGCCCTCCGCAGTCTCTCACAAACATTCTGTGCACACACACACAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR GCA 72 bp | CCTGATCCAGGTGCCTCTGCCTGGAGTCCCGGCTCCTaGACTTTATCTTCCCATTTCCCAGGAGCCTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: PDPGASAWSPGS*TLSSHFPGAFK Trigger: CTTAAAGGCTCCTGGGAAATGGGAAGATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR GCA 72 bp | TTGATCTGCAAGTGCTCCTGGGCCTCCTTGGGGGCATaGATTTGGCCTCTGCTCTTTCTGGCTCCTGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LICKCSWASLGA*IWPLLFLAPVL Trigger: AAGGACAGGAGCCAGAAAGAGCAGAGGCCAAATGCATGCCCCCAAGGAGGCCCAGGAGCACTTGCAGATCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR CCA 72 bp | GGGGAGGGTTCAGCACACTGTGGGTGTAGTGATCGATaGGGGAGGGTTCAGCACACTGTGGGAGTAGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: GEGSAHCGCSDR*GRVQHTVGVVI Trigger: AATCACTACTCCCACAGTGTGCTGAACCCTCCCCCATCGATCACTACACCCACAGTGTGCTGAACCCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| 3UTR CCA 72 bp | CAGAATGTTTGTGAGAGACTGCGGAGGGCCAGTGGGTaGATGTGGACACTGCAGGAATGTCCTGCTCGGACA | + |
|
Preference number: 3 (lower is better) Translates to: QNVCERLRRASG*MWTLQECPART Trigger: TGTCCGAGCAGGACATTCCTGCAGTGTCCACATCCACCCACTGGCCCTCCGCAGTCTCTCACAAACATTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR CCA 72 bp | TTCTATCACCACGGCGACACCCACCTGACTACTTCTTaGGCCATTCATCTGCAAGTCAGTGGTCCCGTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: FYHHGDTHLTTS*AIHLQVSGPVP Trigger: CGGCACGGGACCACTGACTTGCAGATGAATGGCCCAAGAAGTAGTCAGGTGGGTGTCGCCGTGGTGATAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR CCA 72 bp | CCCTCTCCATCAAGACCTGATCCAGGTGCCTCTGCCTaGAGTCCCGGCTCCTGCACTTTATCTTCCCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: PSPSRPDPGASA*SPGSCTLSSHF Trigger: GAAATGGGAAGATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAGGTCTTGATGGAGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR TCA 72 bp | CTAGAACAGACCCGCCTTCTTAGTGGGATGGGATTTTaGCGCTCTCTGGTGAGAGGGTGGCAGGAAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LEQTRLLSGMGF*RSLVRGWQEEE Trigger: CTCCTCTTCCTGCCACCCTCTCACCAGAGAGCGTCAAAATCCCATCCCACTAAGAAGGCGGGTCTGTTCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR TCA 72 bp | GTCTCAACCCGAGACCTAGCCCTTCAAGGACTCTTCTaGGGAGGCAGGACAGTATGCTCCCATTGGGGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VSTRDLALQGLF*GGRTVCSHWGL Trigger: TAGACCCCAATGGGAGCATACTGTCCTGCCTCCTCAGAAGAGTCCTTGAAGGGCTAGGTCTCGGGTTGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR CCA 72 bp | CTCTTGGTGCTTGTGTGTGCTTCCTGGTCTGGAATATaGTCCTGCTGGGGCATGGTGACCACACTGACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LLVLVCASWSGI*SCWGMVTTLTS Trigger: GCTAGTCAGTGTGGTCACCATGCCCCAGCAGGACCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR CCA 72 bp | GGGGAAGGTCTTCTGTTAAGAGTTGAACAGATGAGATaGGGTGACCAGGCTGGGTCCCCAGCCACACTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GEGLLLRVEQMR*GDQAGSPATLW Trigger: CCAAAGTGTGGCTGGGGACCCAGCCTGGTCACCCCATCTCATCTGTTCAACTCTTAACAGAAGACCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR CCA 72 bp | TTGAGGAAGGGTCAAGGTTCCCTAGCCTGGCCTGTCTaGTATGTAGGAACCATGATGGCTTGGGCCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LRKGQGSLAWPV*YVGTMMAWASL Trigger: GAGAGAGGCCCAAGCCATCATGGTTCCTACATACCAGACAGGCCAGGCTAGGGAACCTTGACCCTTCCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCAGCCCAGTTGGTCGTGTTTGTTCAGCAAGCACAGAGCCTTGGCTTTGATGAGCCTGCTCCAGGATaGAGGCTTTCCCAACTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SPAQLVVFVQQAQSLGFDEPAPG*RLSQLQ Trigger: CTGCAGTTGGGAAAGCCTCAATCCTGGAGCAGGCTC...ATCAAAGCCAAGGCTCTGTGCTTGCTGAACAAACACGACCAACTGGGCTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR TCA 72 bp | GTATGTGTGGTTGTGTGTGTGTGCACAGAATGTTTGTaGGAGACTGCGGAGGGCCAGTGGGTGGATGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VCVVVCVCTECL*ETAEGQWVDVD Trigger: GTCCACATCCACCCACTGGCCCTCCGCAGTCTCTCACAAACATTCTGTGCACACACACACAACCACACATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR TCA 72 bp | GGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCATTaGGCCACCTCTCCAGCCCAGTTGGTCGTGTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GTSGRAVSALNH*ATSPAQLVVFV Trigger: AACAAACACGACCAACTGGGCTGGAGAGGTGGCTCAATGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCAACATGTGGTTGCTGGGAGTTaGACTCGGGACCTCTGGAAGAGCAGTCAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QMVVSQHVVAGS*TRDLWKSSQCS Trigger: AGAGCACTGACTGCTCTTCCAGAGGTCCCGAGTTCAACTCCCAGCAACCACATGTTGGCTCACAACCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR GCA 72 bp | GGCACCCGAGGCCTGAAGTCCTTCATGTACTCTTGGTaGTTGTGTGTGCTTCCTGGTCTGGAATATGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GTRGLKSFMYSW*LCVLPGLEYGP Trigger: AGGACCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTTCAGGCCTCGGGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR GCA 72 bp | TTTGTGACAAAGCCTCAGGCCTATGTTACTCAGGGTTaGCTTGAGCCCATGCCCAGAGACTCTGGTCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: FVTKPQAYVTQG*LEPMPRDSGLR Trigger: CCTGAGACCAGAGTCTCTGGGCATGGGCTCAAGGCAACCCTGAGTAACATAGGCCTGAGGCTTTGTCACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR CCA 72 bp | CTGGGCACCCGAGGCCTGAAGTCCTTCATGTACTCTTaGTGCTTGTGTGTGCTTCCTGGTCTGGAATATGGT | + |
|
Preference number: 3 (lower is better) Translates to: LGTRGLKSFMYS*CLCVLPGLEYG Trigger: ACCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTTCAGGCCTCGGGTGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR CCA 72 bp | GTGCTCTTAACCATTGAGCCACCTCTCCAGCCCAGTTaGTCGTGTTTGTTCAGCAAGCACAGAGCCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VLLTIEPPLQPS*SCLFSKHRALA Trigger: AGCCAAGGCTCTGTGCTTGCTGAACAAACACGACCAACTGGGCTGGAGAGGTGGCTCAATGGTTAAGAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CAA 90 bp | AGACACACCAGAAGAGGGTATCAGATCCCATTACAGATGGTTGTGAGCCAACATTTGAGGACAGGCACCTaGGGGGCTGCAGCCTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RHTRRGYQIPLQMVVSQHLRTGT*GAAAWL Trigger: TAGCCAGGCTGCAGCCCCCAAGGTGCCTGTCCTCAA...ATGTTGGCTCACAACCATCTGTAATGGGATCTGATACCCTCTTCTGGTGTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR TCA 72 bp | CCAGAGTCCTATTCTATCACCACGGCGACACCCACCTaGCTACTTCTTGGGCCATTCATCTGCAAGTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PESYSITTATPT*LLLGPFICKSV Trigger: CACTGACTTGCAGATGAATGGCCCAAGAAGTAGTCAGGTGGGTGTCGCCGTGGTGATAGAATAGGACTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR GCA 72 bp | TCTCTAAACAGCTTCCCTTCAAACAAGGATGCTGTGTaGTGGCCCTCAAGCTCGGCTGCCTTACTTCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: SLNSFPSNKDAV*WPSSSAALLLT Trigger: GGTGAGAAGTAAGGCAGCCGAGCTTGAGGGCCAGCACACAGCATCCTTGTTTGAAGGGAAGCTGTTTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR CCA 72 bp | CTAAACAGCTTCCCTTCAAACAAGGATGCTGTGTGCTaGCCCTCAAGCTCGGCTGCCTTACTTCTCACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LNSFPSNKDAVC*PSSSAALLLTS Trigger: TGAGGTGAGAAGTAAGGCAGCCGAGCTTGAGGGCCAGCACACAGCATCCTTGTTTGAAGGGAAGCTGTTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR CCA 72 bp | GTGAGGATGGTCTTAAGGACTGATGGCCTTGGCCTCTaGGGCCCTACTTCTCTAAACAGCTTCCCTTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VRMVLRTDGLGL*GPTSLNSFPSN Trigger: GTTTGAAGGGAAGCTGTTTAGAGAAGTAGGGCCCCAGAGGCCAAGGCCATCAGTCCTTAAGACCATCCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR CCA 72 bp | CCCATTACAGATGGTTGTGAGCCAACATGTGGTTGCTaGGAGTTGAACTCGGGACCTCTGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PITDGCEPTCGC*ELNSGPLEEQS Trigger: TGACTGCTCTTCCAGAGGTCCCGAGTTCAACTCCCAGCAACCACATGTTGGCTCACAACCATCTGTAATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCCATTCATCTGCAAGTCAGTGGTCCCGTGCCGCTGTTCTGTGCCTCTGCTTTTTCGAGCTATTGTGGTaGAGCTTCAGCCTTTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GHSSASQWSRAAVLCLCFFELLW*SFSLFL Trigger: AAGGAAAAGGCTGAAGCTCAACCACAATAGCTCGAA...AAAGCAGAGGCACAGAACAGCGGCACGGGACCACTGACTTGCAGATGAATGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR TCA 72 bp | GTTTTCCTCCACATCTGTGAGGATGGTCTTAAGGACTaGTGGCCTTGGCCTCTGGGGCCCTACTTCTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VFLHICEDGLKD*WPWPLGPYFSK Trigger: TTTAGAGAAGTAGGGCCCCAGAGGCCAAGGCCATCAGTCCTTAAGACCATCCTCACAGATGTGGAGGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR TCA 72 bp | AGTGTTGGAAGGTGCCAAGCTGAGCAGCATCAGGCCTaGCTTCTGTGTCTTGGGGAAGGTCTTCTGTTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SVGRCQAEQHQA*LLCLGEGLLLR Trigger: TCTTAACAGAAGACCTTCCCCAAGACACAGAAGTCAGGCCTGATGCTGCTCAGCTTGGCACCTTCCAACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR TCA 72 bp | CCAGAAGAGGGTATCAGATCCCATTACAGATGGTTGTaGGCCAACATGTGGTTGCTGGGAGTTGAACTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: PEEGIRSHYRWL*ANMWLLGVELG Trigger: CCCGAGTTCAACTCCCAGCAACCACATGTTGGCTCACAACCATCTGTAATGGGATCTGATACCCTCTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAGAGCTACTCTGCCCAGGCTGAGGAGAGTCTGAGTGTTGGAAGGTGCCAAGGTAATGAATCCTTTTaGTTTGTGACAAAGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LESYSAQAEESLSVGRCQGNESF*FVTKPQ Trigger: CTGAGGCTTTGTCACAAACAAAAAGGATTCATTACC...TTGGCACCTTCCAACACTCAGACTCTCCTCAGCCTGGGCAGAGTAGCTCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR CCA 72 bp | CTATCAAGGAAAGAGTCACCCAGAGGCAGAGTGACTTaGCCAGGCACACTTAGCATTCAAGAACAGAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: LSRKESPRGRVT*PGTLSIQEQRP Trigger: AGGTCTCTGTTCTTGAATGCTAAGTGTGCCTGGCCAAGTCACTCTGCCTCTGGGTGACTCTTTCCTTGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTCCACAAGAGTGTCAGGGAATATGAAGAGAGAGAGAGAGAGAGTGTGTATCTCCACAACTCTGTCTaGACAGGGCTTGAGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GFHKSVREYEERERESVYLHNSV*TGLEKG Trigger: TCCCTTCTCAAGCCCTGTCAAGACAGAGTTGTGGAG...ATACACACTCTCTCTCTCTCTCTCTTCATATTCCCTGACACTCTTGTGGAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR TCA 72 bp | TCTCACTATCAAGGAAAGAGTCACCCAGAGGCAGAGTaGCTTGGCCAGGCACACTTAGCATTCAAGAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SHYQGKSHPEAE*LGQAHLAFKNR Trigger: TCTGTTCTTGAATGCTAAGTGTGCCTGGCCAAGTCACTCTGCCTCTGGGTGACTCTTTCCTTGATAGTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR GCA 72 bp | CTTCTTGGGCCATTCATCTGCAAGTCAGTGGTCCCGTaGCGCTGTTCTGTGCCTCTGCTTTTAATTAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: LLGPFICKSVVP*RCSVPLLLINQ Trigger: TTGATTAATTAAAAGCAGAGGCACAGAACAGCGGCACGGGACCACTGACTTGCAGATGAATGGCCCAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR CCA 72 bp | ACCTCACATCTAAGCTTTCAATGGTTCGAGCTATTGTaGTTGAGCTTCAGCCTTTTCCTTCCCCCACCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TSHLSFQWFELL*LSFSLFLPPPP Trigger: TGGAGGTGGGGGAAGGAAAAGGCTGAAGCTCAACCACAATAGCTCGAACCATTGAAAGCTTAGATGTGAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR CCA 72 bp | AAGAGGTTCAAGAATATTCTTAGCTCTAGAGAGCTGTaGTCTGCTGAGATGGACATCACTGCGGCCCTATTT | + |
|
Preference number: 3 (lower is better) Translates to: KRFKNILSSREL*SAEMDITAALF Trigger: AAATAGGGCCGCAGTGATGTCCATCTCAGCAGACCACAGCTCTCTAGAGCTAAGAATATTCTTGAACCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR GCA 90 bp | GGGATCCGGAACCTACAGCAGTGGTGGGTGAGGCGCACAGCGACCTCCAGGCTTACGCCCCCGACCTTCTaGAGGCCCGAGAAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GIRNLQQWWVRRTATSRLTPPTF*RPEKLG Trigger: CCCCAGCTTCTCGGGCCTGCAGAAGGTCGGGGGCGT...AAGCCTGGAGGTCGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCGGATCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143817.8 |
||
| 3UTR CAA 72 bp | ATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTaGCCAACCGCAGGGCCTCTGGGCACCCGAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPKRARQSCWHR*PTAGPLGTRGL Trigger: CAGGCCTCGGGTGCCCAGAGGCCCTGCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAGCTGCTGGCACAGGTTGCCAACCGCAGGGCCTCTGGGCACCCGAGGCCTCCTGTCCTTTCTCTGTaGAGGAGCCACCCCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AELLAQVANRRASGHPRPPVLSL*RSHPKL Trigger: CAGCTTGGGGTGGCTCCTGCACAGAGAAAGGACAGG...AGGCCTCGGGTGCCCAGAGGCCCTGCGGTTGGCAACCTGTGCCAGCAGCTCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGCCCGCTGTCCAGTCCATCCACCTaGAGGAGCTTCTTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: EEAGSHWPTLAHAGLSPLSSPST*RSFLAT Trigger: GGTGGCCAAGAAGCTCCTGCAGGTGGATGGACTGGA...CAGCGGGCTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR GCA 90 bp | GAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTGACGCCCCCGACCTTCTaGAGGCCCGAGAAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EFHALLPLGCGAPPVTVVTPPTF*RPEKLG Trigger: CCCCAGCTTCTCGGGCCTGCAGAAGGTCGGGGGCGT...CACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000143817.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGCCCGCTGCCTGTCCTTTCTCTGTaGAGGAGCCACCCCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EEAGSHWPTLAHAGLSPLPVLSL*RSHPKL Trigger: CAGCTTGGGGTGGCTCCTGCACAGAGAAAGGACAGG...CAGCGGGCTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGCCCGCTGCATCCTGTAAGGACACCAAGGTaGCAGGCCACCCCGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSHWPTLAHAGLSPLHPVRTPR*QATPKP Trigger: AGGCTTCGGGGTGGCCTGCCACCTTGGTGTCCTTAC...AGGATGCAGCGGGCTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR CCA 90 bp | GGGATCCGGAACCTACAGCAGTGGTGGGTGAGGCGCACAGCGACCTCCAGGCTTGTAAGGACACCAAGGTaGCAGGCCACCCCGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GIRNLQQWWVRRTATSRLVRTPR*QATPKP Trigger: AGGCTTCGGGGTGGCCTGCCACCTTGGTGTCCTTAC...AAGCCTGGAGGTCGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCGGATCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGCCCGCTGCATCCTCCTGCAGGAGCTTCTTaGCCACCCCGATGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGSHWPTLAHAGLSPLHPPAGAS*PPRCMA Trigger: TGCCATGCATCGGGGTGGCCAAGAAGCTCCTGCAGG...AGGATGCAGCGGGCTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR CCA 90 bp | GGTTGCCTTGAGCCCATGCCCAGAGACTCTGGTCTCAGGCTCCCCAGACACTCCAGGGGCTTGGTGCTGTaGTCATGGCTCCTCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GCLEPMPRDSGLRLPRHSRGLVL*SWLLRA Trigger: GGCCCTGAGGAGCCATGACCACAGCACCAAGCCCCT...GGAGTGTCTGGGGAGCCTGAGACCAGAGTCTCTGGGCATGGGCTCAAGGCAACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR TCA 90 bp | GGAGGGCCAGTGGGTGGATGTGGACACTGCAGGAATGTCCTGCTCGGACACCCTAGGTCCGAGTCTTCCTaGTGCCCGGTTCCCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGPVGGCGHCRNVLLGHPRSESS*CPVPSN Trigger: GTTGGAGGGAACCGGGCATCAGGAAGACTCGGACCT...AGGGTGTCCGAGCAGGACATTCCTGCAGTGTCCACATCCACCCACTGGCCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGGCGTATAGGTTCTGGGATCCGGAACCTACAGCAGTGGTGGGTGAGGCGCCCTGCAGGAGCTTCTTaGCCACCCCGATGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AWRIGSGIRNLQQWWVRRPAGAS*PPRCMA Trigger: TGCCATGCATCGGGGTGGCCAAGAAGCTCCTGCAGG...GCGCCTCACCCACCACTGCTGTAGGTTCCGGATCCCAGAACCTATACGCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
||
| CDS-3UTR CCA 90 bp | GATCGATGGGGGAGGGTTCAGCACACTGTGGGTGTAGTGATCGATGGGGGAGGGCGGAACCTACAGCAGTaGTGGGTGAGGCGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DRWGRVQHTVGVVIDGGGRNLQQ*WVRRTA Trigger: CGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCG...CCCTCCCCCATCGATCACTACACCCACAGTGTGCTGAACCCTCCCCCATCGATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGTCCAGCACACAGTGGGTGTAGTGATTGATGGGGGAGGGTCCAGCACACCGAAGCCTCGTTGGTaGAGCACCCCGTTTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GRVQHTVGVVIDGGGSSTPKPRW*STPFPS Trigger: GGATGGAAACGGGGTGCTTCACCAACGAGGCTTCGG...TGTGCTGGACCCTCCCCCATCAATCACTACACCCACTGTGTGCTGGACCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS-3UTR TCA 90 bp | GGTCTGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCGCCCGAAGCCTCGTTGGTaGAGCACCCCGTTTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GLYSQEGKAELLAQVANRPKPRW*STPFPS Trigger: GGATGGAAACGGGGTGCTTCACCAACGAGGCTTCGG...GCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCCTGGTCTGGAATATGGTCCTGCTGGGGCATGGTGACCACACTGACTAGCGGGGGCTTTCCGGTCTaGGCTGGAGTCTCTGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASWSGIWSCWGMVTTLTSGGFPV*AGVSAV Trigger: GACGGCAGAGACTCCAGCTCAGACCGGAAAGCCCCC...GCTAGTCAGTGTGGTCACCATGCCCCAGCAGGACCATATTCCAGACCAGGAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTGATGGAGGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTATCCAGTCCATCCACCTaGAGGAGCTTCTTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PVMEEAGSHWPTLAHAGLSSPST*RSFLAT Trigger: GGTGGCCAAGAAGCTCCTGCAGGTGGATGGACTGGA...TAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCACTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR GCA 90 bp | AGTGATGGAGGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGGCCTTGATCTGCAAGTaGTCCTGGGCCTCCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDGGGWQPLAYTGPRWIKALICK*SWASLG Trigger: CCCCAAGGAGGCCCAGGAGCACTTGCAGATCAAGGC...CTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCGCCCTGCAGGAGCTTCTTaGCCACCCCGATGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLYSQEGKAELLAQVANRPAGAS*PPRCMA Trigger: TGCCATGCATCGGGGTGGCCAAGAAGCTCCTGCAGG...GCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCCCCTTCAAGGCCACCCAGACAAGAAGCCACCAGGCTAGAACAGACCCGCTTGGTGCTGTGGTCATaGCTCCTCAGGGCCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAPSRPPRQEATRLEQTRLVLWS*LLRAIP Trigger: GGGAATGGCCCTGAGGAGCCATGACCACAGCACCAA...GCGGGTCTGTTCTAGCCTGGTGGCTTCTTGTCTGGGTGGCCTTGAAGGGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR CCA 90 bp | TCGATGGGGGAGGGTTCAGCACACTGTGGGTGTAGTGATCGATGGGGGAGGGTTAGGGGCTTGGTGCTGTaGTCATGGCTCCTCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SMGEGSAHCGCSDRWGRVRGLVL*SWLLRA Trigger: GGCCCTGAGGAGCCATGACCACAGCACCAAGCCCCT...AACCCTCCCCCATCGATCACTACACCCACAGTGTGCTGAACCCTCCCCCATCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS-3UTR CCA 90 bp | CAGGTCTGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCCGGAACCTACAGCAGTaGTGGGTGAGGCGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QVCIPKRARQSCWHRLPTRNLQQ*WVRRTA Trigger: CGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCG...GGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACAGACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
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| CDS-3UTR CCA 90 bp | GAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGCCCGCTGCATGAGCGGATGTCAGCCTaGCGTATAGGTTCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: EAGSHWPTLAHAGLSPLHERMSA*RIGSGI Trigger: GATCCCAGAACCTATACGCCAGGCTGACATCCGCTC...ATGCAGCGGGCTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
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| CDS-3UTR CCA 90 bp | GCTGGATTAAGCCCGCTGCATCCTCCTGGAGTTCCATGCACTGTTGCCTCTGGGTGGTCCTTCTGCTCCTaGAAGCCTGGCTCGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLSPLHPPGVPCTVASGWSFCS*KPGSGA Trigger: AGCCCCCGAGCCAGGCTTCCAGGAGCAGAAGGACCA...CCCAGAGGCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGGCTTAATCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
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| CDS-3UTR CCA 90 bp | GCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGCCCGCTGCATCCTGTTCCCTCCAACTGCTaGTCCTTCTGCTCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGSHWPTLAHAGLSPLHPVPSNC*SFCSWK Trigger: CTTCCAGGAGCAGAAGGACCAGCAGTTGGAGGGAAC...AGGATGCAGCGGGCTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
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| 3UTR CAA 72 bp | CAACTGCAGGTCCCTCAAGCTCAGCGGCAAACAAGCTaGAGGACAGGCACCTTGGGGGCTGCAGCCTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QLQVPQAQRQTS*RTGTLGAAAWL Trigger: TAGCCAGGCTGCAGCCCCCAAGGTGCCTGTCCTCAAGCTTGTTTGCCGCTGAGCTTGAGGGACCTGCAGTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| CDS-3UTR TCA 90 bp | TCTGCAAGTGCTCCTGGGCCTCCTTGGGGGCATGCATTTGGCCTCTGCTCTTTCCCGAAGCCTCGTTGGTaGAGCACCCCGTTTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SASAPGPPWGHAFGLCSFPKPRW*STPFPS Trigger: GGATGGAAACGGGGTGCTTCACCAACGAGGCTTCGG...GAAAGAGCAGAGGCCAAATGCATGCCCCCAAGGAGGCCCAGGAGCACTTGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143817.8 |
||
| CDS-3UTR TCA 90 bp | CCACGCTGGATTAAGCCCGCTGCATCCTCCTGGAGTTCCATGCACTGTTGCCTCTCAGGAGGCCTGCCTTaGTCTGCAAGTGCTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRWIKPAASSWSSMHCCLSGGLP*SASAPG Trigger: CCCAGGAGCACTTGCAGATCAAGGCAGGCCTCCTGA...GAGGCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGGCTTAATCCAGCGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGTGGTGGGTGAGGCGCACAGCGACCTCCAGGCTTATTCTGTGGCCCACCCGAAGCCTGGGGCATaGGATCTGGTTCCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TAVVGEAHSDLQAYSVAHPKPGA*DLVPSL Trigger: AAGAGAAGGAACCAGATCTCATGCCCCAGGCTTCGG...GTGGGCCACAGAATAAGCCTGGAGGTCGCTGTGCGCCTCACCCACCACTGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153204.9 ENSMUST00000154370.8 |
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| CDS-3UTR GCA 90 bp | CCTGGAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGCCTTGATCTGCAAGTaGTCCTGGGCCTCCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGVPCTVASGVWCSTCDCALICK*SWASLG Trigger: CCCCAAGGAGGCCCAGGAGCACTTGCAGATCAAGGC...ACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR CCA 90 bp | CCACGCTGGATTAAGCCCGCTGCATCCTCCTGGAGTTCCATGCACTGTTGCCTCGTAAGGACACCAAGGTaGCAGGCCACCCCGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRWIKPAASSWSSMHCCLVRTPR*QATPKP Trigger: AGGCTTCGGGGTGGCCTGCCACCTTGGTGTCCTTAC...GAGGCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGGCTTAATCCAGCGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR CCA 90 bp | TTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTGAGGGTAAGGACACCAAGGTaGCAGGCCACCCCGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FHALLPLGCGAPPVTVVRVRTPR*QATPKP Trigger: AGGCTTCGGGGTGGCCTGCCACCTTGGTGTCCTTAC...CCTCACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTCCTGCAGGAGCTTCTTaGCCACCCCGATGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGVPCTVASGVWCSTCDCPAGAS*PPRCMA Trigger: TGCCATGCATCGGGGTGGCCAAGAAGCTCCTGCAGG...ACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR CCA 90 bp | AGTGATGGAGGAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGTTGGTGCTGTGGTCATaGCTCCTCAGGGCCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SDGGGWQPLAYTGPRWIKLVLWS*LLRAIP Trigger: GGGAATGGCCCTGAGGAGCCATGACCACAGCACCAA...CTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTCCTCCATCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR CCA 90 bp | CATCAAGACCTGATCCAGGTGCCTCTGCCTGGAGTCCCGGCTCCTGCACTTTATAGGGGCTTGGTGCTGTaGTCATGGCTCCTCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HQDLIQVPLPGVPAPALYRGLVL*SWLLRA Trigger: GGCCCTGAGGAGCCATGACCACAGCACCAAGCCCCT...ATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAGGTCTTGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| CDS-3UTR CCA 90 bp | AGATGCCACTCTGGTGAGCCTAGAATGTGTGTGGGAGGACAGGGAGGGCACTGCATCTGCAAGTGCTCCTaGGCCTCCTTGGGGGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RCHSGEPRMCVGGQGGHCICKCS*ASLGAC Trigger: GCATGCCCCCAAGGAGGCCCAGGAGCACTTGCAGAT...GCAGTGCCCTCCCTGTCCTCCCACACACATTCTAGGCTCACCAGAGTGGCATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| CDS-3UTR CCA 90 bp | GGCCATTCATCTGCAAGTCAGTGGTCCCGTGCCGCTGTTCTGTGCCTCTGCTTTTGGTCCTTCTGCTCCTaGAAGCCTGGCTCGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHSSASQWSRAAVLCLCFWSFCS*KPGSGA Trigger: AGCCCCCGAGCCAGGCTTCCAGGAGCAGAAGGACCA...AAAGCAGAGGCACAGAACAGCGGCACGGGACCACTGACTTGCAGATGAATGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR CCA 90 bp | GCTTGTGTGTGCTTCCTGGTCTGGAATATGGTCCTGCTGGGGCATGGTGACCACTGGTCCTTCTGCTCCTaGAAGCCTGGCTCGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ACVCFLVWNMVLLGHGDHWSFCS*KPGSGA Trigger: AGCCCCCGAGCCAGGCTTCCAGGAGCAGAAGGACCA...GTGGTCACCATGCCCCAGCAGGACCATATTCCAGACCAGGAAGCACACACAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| 3UTR CAA 72 bp | GACTCCCCATCGCCCACTCTTGAGCCTGCTCCAGGATaGAGGCTTTCCCAACTGCAGGTCCCTCAAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSPSPTLEPAPG*RLSQLQVPQAQ Trigger: CTGAGCTTGAGGGACCTGCAGTTGGGAAAGCCTCAATCCTGGAGCAGGCTCAAGAGTGGGCGATGGGGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR CAA 72 bp | GTAGGCGGCTCCAGCCCTGGCAGTCCACCATTCTTGTaGTCCCATGAGCAGGAAATGGGGATGACTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGGSSPGSPPFL*SHEQEMGMTGV Trigger: GACCCCAGTCATCCCCATTTCCTGCTCATGGGACAACAAGAATGGTGGACTGCCAGGGCTGGAGCCGCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR CAA 72 bp | AGGCCTGCCTTGATCTGCAAGTGCTCCTGGGCCTCCTaGGGGGCATGCATTTGGCCTCTGCTCTTTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPALICKCSWAS*GACIWPLLFLA Trigger: AGCCAGAAAGAGCAGAGGCCAAATGCATGCCCCCAAGGAGGCCCAGGAGCACTTGCAGATCAAGGCAGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR TCA 90 bp | GCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTGAGGTCTCCACTGCTCCTGAACGACCTGGGGCATaGGATCTGGTTCCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASGVWCSTCDCGEVSTAPERPGA*DLVPSL Trigger: AAGAGAAGGAACCAGATCTCATGCCCCAGGTCGTTC...AGGAGCAGTGGAGACCTCACCACAGTCACAGGTGGAGCACCACACCCCAGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
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| CDS-3UTR TCA 90 bp | AGGGCAAGAGACATGTCACAGGCGTGCCATCTCTGTGTCCCAGCTCAGATGCCACCGAAGCCTCGTTGGTaGAGCACCCCGTTTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RARDMSQACHLCVPAQMPPKPRW*STPFPS Trigger: GGATGGAAACGGGGTGCTTCACCAACGAGGCTTCGG...TGGCATCTGAGCTGGGACACAGAGATGGCACGCCTGTGACATGTCTCTTGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
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| CDS-3UTR TCA 90 bp | TCCTGGTCTGGAATATGGTCCTGCTGGGGCATGGTGACCACACTGACTAGCCAGCCGAAGCCTCGTTGGTaGAGCACCCCGTTTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SWSGIWSCWGMVTTLTSQPKPRW*STPFPS Trigger: GGATGGAAACGGGGTGCTTCACCAACGAGGCTTCGG...CTGGCTAGTCAGTGTGGTCACCATGCCCCAGCAGGACCATATTCCAGACCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
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| CDS-3UTR TCA 90 bp | CATCAAGACCTGATCCAGGTGCCTCTGCCTGGAGTCCCGGCTCCTGCACTTTATTCAGGAGGCCTGCCTTaGTCTGCAAGTGCTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HQDLIQVPLPGVPAPALYSGGLP*SASAPG Trigger: CCCAGGAGCACTTGCAGATCAAGGCAGGCCTCCTGA...ATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAGGTCTTGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| CDS-3UTR TCA 90 bp | CATCAAGACCTGATCCAGGTGCCTCTGCCTGGAGTCCCGGCTCCTGCACTTTATAGGTCCGAGTCTTCCTaGTGCCCGGTTCCCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HQDLIQVPLPGVPAPALYRSESS*CPVPSN Trigger: GTTGGAGGGAACCGGGCATCAGGAAGACTCGGACCT...ATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAGGTCTTGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| CDS-3UTR GCA 90 bp | CCACGCTGGATTAAGCCCGCTGCATCCTCCTGGAGTTCCATGCACTGTTGCCTCTCCAGTCCATCCACCTaGAGGAGCTTCTTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PRWIKPAASSWSSMHCCLSSPST*RSFLAT Trigger: GGTGGCCAAGAAGCTCCTGCAGGTGGATGGACTGGA...GAGGCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGGCTTAATCCAGCGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
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| CDS-3UTR GCA 90 bp | CCTGGAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTCCTGTCCTTTCTCTGTaGAGGAGCCACCCCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGVPCTVASGVWCSTCDCPVLSL*RSHPKL Trigger: CAGCTTGGGGTGGCTCCTGCACAGAGAAAGGACAGG...ACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
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| CDS-3UTR GCA 90 bp | CAGGTCTGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCAACTGCTGGTCCTTCTaGTCCTGGAAGCCTGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QVCIPKRARQSCWHRLPTNCWSF*SWKPGS Trigger: CGAGCCAGGCTTCCAGGAGCAGAAGGACCAGCAGTT...GGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACAGACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
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| CDS-3UTR GCA 90 bp | TGGGGTCTAAGGAGCATATGGGCTCCCCAGAAGCCAGGAGACAGCAATTGGCTCCCGGTTCCCTCCAACTaGTGGTCCTTCTGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WGLRSIWAPQKPGDSNWLPVPSN*WSFCSW Trigger: CCAGGAGCAGAAGGACCAGCAGTTGGAGGGAACCGG...GAGCCAATTGCTGTCTCCTGGCTTCTGGGGAGCCCATATGCTCCTTAGACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| CDS-3UTR CCA 90 bp | GGCCATTCATCTGCAAGTCAGTGGTCCCGTGCCGCTGTTCTGTGCCTCTGCTTTCCTGCAGGAGCTTCTTaGCCACCCCGATGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GHSSASQWSRAAVLCLCFPAGAS*PPRCMA Trigger: TGCCATGCATCGGGGTGGCCAAGAAGCTCCTGCAGG...AAAGCAGAGGCACAGAACAGCGGCACGGGACCACTGACTTGCAGATGAATGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| CDS-3UTR CCA 90 bp | GTGTGTGCTTCCTGGTCTGGAATATGGTCCTGCTGGGGCATGGTGACCACACTGCCTGCAGGAGCTTCTTaGCCACCCCGATGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCASWSGIWSCWGMVTTLPAGAS*PPRCMA Trigger: TGCCATGCATCGGGGTGGCCAAGAAGCTCCTGCAGG...CAGTGTGGTCACCATGCCCCAGCAGGACCATATTCCAGACCAGGAAGCACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
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| CDS-3UTR CCA 90 bp | CACCCGAGGCCTGAAGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGAGGGGCTTGGTGCTGTaGTCATGGCTCCTCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HPRPEVLHVLLVLVCASWRGLVL*SWLLRA Trigger: GGCCCTGAGGAGCCATGACCACAGCACCAAGCCCCT...CCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTTCAGGCCTCGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
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| CDS-3UTR CCA 90 bp | CACACTCTATGTTCTATCCACCCTGCTCCTTCAGTTTGCATCCCCCTGGCCCTGCGGAACCTACAGCAGTaGTGGGTGAGGCGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: HTLCSIHPAPSVCIPLALRNLQQ*WVRRTA Trigger: CGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCG...CAGGGCCAGGGGGATGCAAACTGAAGGAGCAGGGTGGATAGAACATAGAGTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| CDS-3UTR CCA 90 bp | CTGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCGCAGGGAGCGGATGTCAGCCTaGCGTATAGGTTCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LYSQEGKAELLAQVANRRERMSA*RIGSGI Trigger: GATCCCAGAACCTATACGCCAGGCTGACATCCGCTC...CCTGCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
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| CDS-3UTR CCA 90 bp | GCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTGAGGTCTCCAGTTCCCTCCAACTGCTaGTCCTTCTGCTCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLPLGCGAPPVTVVRSPVPSNC*SFCSWK Trigger: CTTCCAGGAGCAGAAGGACCAGCAGTTGGAGGGAAC...TGGAGACCTCACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR TCA 90 bp | TGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCGCAGGGGAACGACCTGGGGCATaGGATCTGGTTCCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CIPKRARQSCWHRLPTAGERPGA*DLVPSL Trigger: AAGAGAAGGAACCAGATCTCATGCCCCAGGTCGTTC...CCCTGCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
||
| CDS-3UTR TCA 90 bp | GCCCACGCTGGATTAAGCCCGCTGCATCCTCCTGGAGTTCCATGCACTGTTGCCGAACGACCTGGGGCATaGGATCTGGTTCCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AHAGLSPLHPPGVPCTVAERPGA*DLVPSL Trigger: AAGAGAAGGAACCAGATCTCATGCCCCAGGTCGTTC...GGCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGGCTTAATCCAGCGTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
||
| CDS-3UTR TCA 90 bp | TGGCGTATAGGTTCTGGGATCCGGAACCTACAGCAGTGGTGGGTGAGGCGCACACCGAAGCCTGGGGCATaGGATCTGGTTCCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WRIGSGIRNLQQWWVRRTPKPGA*DLVPSL Trigger: AAGAGAAGGAACCAGATCTCATGCCCCAGGCTTCGG...TGTGCGCCTCACCCACCACTGCTGTAGGTTCCGGATCCCAGAACCTATACGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153204.9 ENSMUST00000154370.8 |
||
| CDS-3UTR GCA 90 bp | GCGCCTGCTCTGTGTGGGGAATGGGAACCAGAGTCCTATTCTATCACCACGGCGGCCTCCTTGGGGGCATaGATTTGGCCTCTGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: APALCGEWEPESYSITTAASLGA*IWPLLF Trigger: AAAGAGCAGAGGCCAAATGCATGCCCCCAAGGAGGC...CGCCGTGGTGATAGAATAGGACTCTGGTTCCCATTCCCCACACAGAGCAGGCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR GCA 90 bp | TTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTGAGGGCCTCCTTGGGGGCATaGATTTGGCCTCTGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FHALLPLGCGAPPVTVVRASLGA*IWPLLF Trigger: AAAGAGCAGAGGCCAAATGCATGCCCCCAAGGAGGC...CCTCACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR GCA 90 bp | TCCTGGTCTGGAATATGGTCCTGCTGGGGCATGGTGACCACACTGACTAGCCAGAACTGCTGGTCCTTCTaGTCCTGGAAGCCTGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SWSGIWSCWGMVTTLTSQNCWSF*SWKPGS Trigger: CGAGCCAGGCTTCCAGGAGCAGAAGGACCAGCAGTT...CTGGCTAGTCAGTGTGGTCACCATGCCCCAGCAGGACCATATTCCAGACCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGTCCAGCACACAGTGGGTGTAGTGATTGATGGGGGAGGGTCCAGCACATCCACAAGAACGACCTaGGGCATGAGATCTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRVQHTVGVVIDGGGSSTSTRTT*GMRSGS Trigger: GGAACCAGATCTCATGCCCCAGGTCGTTCTTGTGGA...TGTGCTGGACCCTCCCCCATCAATCACTACACCCACTGTGTGCTGGACCCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS-3UTR CCA 90 bp | CACTATGGGTGTAGTGATCGATGGGGGAGGGTTCAGCACACTGTGGGTGTAGTGGTAAGGACACCAAGGTaGCAGGCCACCCCGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HYGCSDRWGRVQHTVGVVVRTPR*QATPKP Trigger: AGGCTTCGGGGTGGCCTGCCACCTTGGTGTCCTTAC...CACTACACCCACAGTGTGCTGAACCCTCCCCCATCGATCACTACACCCATAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS-3UTR CCA 90 bp | GACTTAGTAGCTAGCTTCCCCACCATCTGTCACCTCTCCTCCAGGGAATCTGGGGTAAGGACACCAAGGTaGCAGGCCACCCCGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLVASFPTICHLSSRESGVRTPR*QATPKP Trigger: AGGCTTCGGGGTGGCCTGCCACCTTGGTGTCCTTAC...CCCAGATTCCCTGGAGGAGAGGTGACAGATGGTGGGGAAGCTAGCTACTAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| CDS-3UTR CCA 90 bp | CACTATGGGTGTAGTGATCGATGGGGGAGGGTTCAGCACACTGTGGGTGTAGTGCCTGCAGGAGCTTCTTaGCCACCCCGATGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HYGCSDRWGRVQHTVGVVPAGAS*PPRCMA Trigger: TGCCATGCATCGGGGTGGCCAAGAAGCTCCTGCAGG...CACTACACCCACAGTGTGCTGAACCCTCCCCCATCGATCACTACACCCATAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS-3UTR CCA 90 bp | CACTGTGGGTGTAGTGATCGATGGGGGAGGGTTCAGCACACTGTGGGTGTAGTGTTGGTGCTGTGGTCATaGCTCCTCAGGGCCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HCGCSDRWGRVQHTVGVVLVLWS*LLRAIP Trigger: GGGAATGGCCCTGAGGAGCCATGACCACAGCACCAA...CACTACACCCACAGTGTGCTGAACCCTCCCCCATCGATCACTACACCCACAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS-3UTR CCA 90 bp | CAGCACACTGTGGGTGTAGTGATCGATGGGGGAGGGTTCAGCACACTGTGGGTGGAGCGGATGTCAGCCTaGCGTATAGGTTCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QHTVGVVIDGGGFSTLWVERMSA*RIGSGI Trigger: GATCCCAGAACCTATACGCCAGGCTGACATCCGCTC...CACCCACAGTGTGCTGAACCCTCCCCCATCGATCACTACACCCACAGTGTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS-3UTR CCA 90 bp | CATCCTCCTGGAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGAGCGGATGTCAGCCTaGCGTATAGGTTCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HPPGVPCTVASGVWCSTCERMSA*RIGSGI Trigger: GATCCCAGAACCTATACGCCAGGCTGACATCCGCTC...ACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTCCAGGAGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
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| CDS-3UTR CCA 90 bp | GGTCTGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCGCGGCCTCTGCTCTTTCTaGCTCCTGTCCTTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLYSQEGKAELLAQVANRGLCSF*LLSFLC Trigger: ACAGAGAAAGGACAGGAGCCAGAAAGAGCAGAGGCC...GCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| 3UTR CAA 72 bp | ATCAATTGGTTAGGGCAGTGCAGTGGGGATGCTGGATaGGGTTGCTGCTGGGGTGAGTGGGCCAGGTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: INWLGQCSGDAG*GCCWGEWARWV Trigger: TACCCACCTGGCCCACTCACCCCAGCAGCAACCCAATCCAGCATCCCCACTGCACTGCCCTAACCAATTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR CAA 72 bp | CTGCAAGTGCTCCTGGGCCTCCTTGGGGGCATGCATTaGGCCTCTGCTCTTTCTGGCTCCTGTCCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQVLLGLLGGMH*ASALSGSCPFS Trigger: AGAGAAAGGACAGGAGCCAGAAAGAGCAGAGGCCAAATGCATGCCCCCAAGGAGGCCCAGGAGCACTTGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR TCA 90 bp | GGAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTGAACGACCTGGGGCATaGGATCTGGTTCCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GVPCTVASGVWCSTCDCGERPGA*DLVPSL Trigger: AAGAGAAGGAACCAGATCTCATGCCCCAGGTCGTTC...ACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
||
| CDS-3UTR TCA 90 bp | ACCCGAGGCCTGAAGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTAGGTCCGAGTCTTCCTaGTGCCCGGTTCCCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TRGLKSFMYSWCLCVLPGRSESS*CPVPSN Trigger: GTTGGAGGGAACCGGGCATCAGGAAGACTCGGACCT...ACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTTCAGGCCTCGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR GCA 90 bp | ACTGTGGGAGTAGTGATTGTGGGGGAGGGTCCAGCACACAGTGGGTGTAGTGATTCCAGTCCATCCACCTaGAGGAGCTTCTTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TVGVVIVGEGPAHSGCSDSSPST*RSFLAT Trigger: GGTGGCCAAGAAGCTCCTGCAGGTGGATGGACTGGA...ATCACTACACCCACTGTGTGCTGGACCCTCCCCCACAATCACTACTCCCACAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS-3UTR GCA 90 bp | TGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCGCAGGGGGACAGTCCCAGAGCTaGCTATCAGAGGAAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CIPKRARQSCWHRLPTAGGQSQS*LSEEMC Trigger: ACACATTTCCTCTGATAGGCAGCTCTGGGACTGTCC...CCCTGCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
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| CDS-3UTR GCA 90 bp | ACTGTGGGAGTAGTGATTGTGGGGGAGGGTCCAGCACACAGTGGGTGTAGTGATGCTGTCCTTTCTCTGTaGAGGAGCCACCCCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVGVVIVGEGPAHSGCSDAVLSL*RSHPKL Trigger: CAGCTTGGGGTGGCTCCTGCACAGAGAAAGGACAGC...ATCACTACACCCACTGTGTGCTGGACCCTCCCCCACAATCACTACTCCCACAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGATTAAGCCCGCTGCATCCTCCTGGAGTTCCATGCACTGTTGCCTCTGGGCATGCATTTGGCCTCTaGTCTTTCTGGCTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGLSPLHPPGVPCTVASGHAFGL*SFWLLS Trigger: GGACAGGAGCCAGAAAGAGCAGAGGCCAAATGCATG...CCCAGAGGCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGGCTTAATCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR GCA 90 bp | CATCCTCCTGGAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTCATGCATTTGGCCTCTaGTCTTTCTGGCTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPPGVPCTVASGVWCSTCHAFGL*SFWLLS Trigger: GGACAGGAGCCAGAAAGAGCAGAGGCCAAATGCATG...ACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTCCAGGAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR GCA 90 bp | ACCCGAGGCCTGAAGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTGCCTTGATCTGCAAGTaGTCCTGGGCCTCCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRGLKSFMYSWCLCVLPGALICK*SWASLG Trigger: CCCCAAGGAGGCCCAGGAGCACTTGCAGATCAAGGC...ACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTTCAGGCCTCGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR CCA 90 bp | GAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTGTTGGGGGCATGCATTTaGCCTCTGCTCTTTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EFHALLPLGCGAPPVTVVLGACI*PLLFLA Trigger: AGCCAGAAAGAGCAGAGGCCAAATGCATGCCCCCAA...CACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR CCA 90 bp | ACCCGAGGCCTGAAGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTATCTGCAAGTGCTCCTaGGCCTCCTTGGGGGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TRGLKSFMYSWCLCVLPGICKCS*ASLGAC Trigger: GCATGCCCCCAAGGAGGCCCAGGAGCACTTGCAGAT...ACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTTCAGGCCTCGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
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| 3UTR CAA 72 bp | ATAGTAGGCGGCTCCAGCCCTGGCAGTCCACCATTCTaGTTGTCCCATGAGCAGGAAATGGGGATGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IVGGSSPGSPPF*LSHEQEMGMTG Trigger: CCCAGTCATCCCCATTTCCTGCTCATGGGACAACAAGAATGGTGGACTGCCAGGGCTGGAGCCGCCTACTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR TCA 90 bp | GAAGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTCTGGAATATGGGGGGGCTTTCCGGTCTaGGCTGGAGTCTCTGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: EVLHVLLVLVCASWSGIWGGFPV*AGVSAV Trigger: GACGGCAGAGACTCCAGCTCAGACCGGAAAGCCCCC...CCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTTC 56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
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| CDS-3UTR GCA 90 bp | GAGGCTGGCAGCCACTGGCCTACACTGGCCCACGCTGGATTAAGCCCGCTGCATACAATCTTCTCCTTGTaGAGAGCATTGTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EAGSHWPTLAHAGLSPLHTIFSL*RALFSS Trigger: ACTGGAGAACAATGCTCTGCACAAGGAGAAGATTGT...ATGCAGCGGGCTTAATCCAGCGTGGGCCAGTGTAGGCCAGTGGCTGCCAGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR GCA 90 bp | TCTGGGATCCGGAACCTACAGCAGTGGTGGGTGAGGCGCACAGCGACCTCCAGGACAATCTTCTCCTTGTaGAGAGCATTGTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGIRNLQQWWVRRTATSRTIFSL*RALFSS Trigger: ACTGGAGAACAATGCTCTGCACAAGGAGAAGATTGT...CCTGGAGGTCGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCGGATCCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
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| CDS-3UTR GCA 90 bp | CAGCACACTGTGGGTGTAGTGATCGATGGGGGAGGGTTCAGCACACTGTGGGTGGGACAGTCCCAGAGCTaGCTATCAGAGGAAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QHTVGVVIDGGGFSTLWVGQSQS*LSEEMC Trigger: ACACATTTCCTCTGATAGGCAGCTCTGGGACTGTCC...CACCCACAGTGTGCTGAACCCTCCCCCATCGATCACTACACCCACAGTGTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGCCCAGTTGGTCGTGTTTGTTCAGCAAGCACAGAGCCTTGGCTTTGATCCGGTTCCCTCCAACTaGTGGTCCTTCTGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPAQLVVFVQQAQSLGFDPVPSN*WSFCSW Trigger: CCAGGAGCAGAAGGACCAGCAGTTGGAGGGAACCGG...ATCAAAGCCAAGGCTCTGTGCTTGCTGAACAAACACGACCAACTGGGCTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| CDS-3UTR CCA 90 bp | CATCAAGACCTGATCCAGGTGCCTCTGCCTGGAGTCCCGGCTCCTGCACTTTATTCCACAAGAACGACCTaGGGCATGAGATCTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HQDLIQVPLPGVPAPALYSTRTT*GMRSGS Trigger: GGAACCAGATCTCATGCCCCAGGTCGTTCTTGTGGA...ATAAAGTGCAGGAGCCGGGACTCCAGGCAGAGGCACCTGGATCAGGTCTTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| CDS-3UTR CCA 90 bp | ACCCGAGGCCTGAAGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTTTGGTGCTGTGGTCATaGCTCCTCAGGGCCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TRGLKSFMYSWCLCVLPGLVLWS*LLRAIP Trigger: GGGAATGGCCCTGAGGAGCCATGACCACAGCACCAA...ACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTTCAGGCCTCGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
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| CDS-3UTR CCA 90 bp | TTCATCTGCAAGTCAGTGGTCCCGTGCCGCTGTTCTGTGCCTCTGCTTTTAATTCGGAACCTACAGCAGTaGTGGGTGAGGCGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FICKSVVPCRCSVPLLLIRNLQQ*WVRRTA Trigger: CGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCG...AATTAAAAGCAGAGGCACAGAACAGCGGCACGGGACCACTGACTTGCAGATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| CDS-3UTR CCA 90 bp | GCTTGTGTGTGCTTCCTGGTCTGGAATATGGTCCTGCTGGGGCATGGTGACCACCTGGCGTATAGGTTCTaGGATCCGGAACCTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ACVCFLVWNMVLLGHGDHLAYRF*DPEPTA Trigger: TGCTGTAGGTTCCGGATCCCAGAACCTATACGCCAG...GTGGTCACCATGCCCCAGCAGGACCATATTCCAGACCAGGAAGCACACACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
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| CDS-3UTR CCA 90 bp | TGGGGTCTAAGGAGCATATGGGCTCCCCAGAAGCCAGGAGACAGCAATTGGCTCGGCCTCTGCTCTTTCTaGCTCCTGTCCTTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WGLRSIWAPQKPGDSNWLGLCSF*LLSFLC Trigger: ACAGAGAAAGGACAGGAGCCAGAAAGAGCAGAGGCC...GAGCCAATTGCTGTCTCCTGGCTTCTGGGGAGCCCATATGCTCCTTAGACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR CCA 90 bp | GCTTGTGTGTGCTTCCTGGTCTGGAATATGGTCCTGCTGGGGCATGGTGACCACTTGGGGGCATGCATTTaGCCTCTGCTCTTTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ACVCFLVWNMVLLGHGDHLGACI*PLLFLA Trigger: AGCCAGAAAGAGCAGAGGCCAAATGCATGCCCCCAA...GTGGTCACCATGCCCCAGCAGGACCATATTCCAGACCAGGAAGCACACACAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
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| CDS-3UTR TCA 90 bp | GGGTGTAGTGATCGATGGGGGAGGGTTCAGCACACTGTGGGAGTAGTGATTGTGGAACGACCTGGGGCATaGGATCTGGTTCCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GCSDRWGRVQHTVGVVIVERPGA*DLVPSL Trigger: AAGAGAAGGAACCAGATCTCATGCCCCAGGTCGTTC...CACAATCACTACTCCCACAGTGTGCTGAACCCTCCCCCATCGATCACTACACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS-3UTR TCA 90 bp | GAAGTAAGAGTGACCCATGAGGGTAAAGCCAGGAAGAACCAGGTCTGTATTCCCTCAGGAGGCCTGCCTTaGTCTGCAAGTGCTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVRVTHEGKARKNQVCIPSGGLP*SASAPG Trigger: CCCAGGAGCACTTGCAGATCAAGGCAGGCCTCCTGA...GGGAATACAGACCTGGTTCTTCCTGGCTTTACCCTCATGGGTCACTCTTACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR TCA 90 bp | AAGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTCTGGAATATGGTGGGGGCTTTCCGGTCTaGGCTGGAGTCTCTGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSFMYSWCLCVLPGLEYGGGFPV*AGVSAV Trigger: GACGGCAGAGACTCCAGCTCAGACCGGAAAGCCCCC...ACCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR GCA 90 bp | GCCTGGCGTATAGGTTCTGGGATCCGGAACCTACAGCAGTGGTGGGTGAGGCGCACAATCTTCTCCTTGTaGAGAGCATTGTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AWRIGSGIRNLQQWWVRRTIFSL*RALFSS Trigger: ACTGGAGAACAATGCTCTGCACAAGGAGAAGATTGT...GCGCCTCACCCACCACTGCTGTAGGTTCCGGATCCCAGAACCTATACGCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTGAGGATGGTCTTAAGGACTGATGGCCTTGGCCTCTGGGGCCCTACTTCTTCCACAAGAACGACCTaGGGCATGAGATCTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVRMVLRTDGLGLWGPTSSTRTT*GMRSGS Trigger: GGAACCAGATCTCATGCCCCAGGTCGTTCTTGTGGA...AGAAGTAGGGCCCCAGAGGCCAAGGCCATCAGTCCTTAAGACCATCCTCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTGTAGTGATCGATGGGGGAGGGTTCAGCACACTGTGGGTGTAGTGATCCTGGCGTATAGGTTCTaGGATCCGGAACCTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGCSDRWGRVQHTVGVVILAYRF*DPEPTA Trigger: TGCTGTAGGTTCCGGATCCCAGAACCTATACGCCAG...GATCACTACACCCACAGTGTGCTGAACCCTCCCCCATCGATCACTACACCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| 3UTR CAA 72 bp | TCTGGGCACCCGAGGCCTGAAGTCCTTCATGTACTCTaGGTGCTTGTGTGTGCTTCCTGGTCTGGAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: SGHPRPEVLHVL*VLVCASWSGIW Trigger: CCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTTCAGGCCTCGGGTGCCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| 3UTR CAA 72 bp | ACCATTGAGCCACCTCTCCAGCCCAGTTGGTCGTGTTaGTTCAGCAAGCACAGAGCCTTGGCTTTGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TIEPPLQPSWSC*FSKHRALALIS Trigger: GGAGATCAAAGCCAAGGCTCTGTGCTTGCTGAACAAACACGACCAACTGGGCTGGAGAGGTGGCTCAATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR CCA 90 bp | ACCCGAGGCCTGAAGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTTCCACAAGAACGACCTaGGGCATGAGATCTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TRGLKSFMYSWCLCVLPGSTRTT*GMRSGS Trigger: GGAACCAGATCTCATGCCCCAGGTCGTTCTTGTGGA...ACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTTCAGGCCTCGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
||
| CDS-3UTR CCA 90 bp | CAGGACTTAGTAGCTAGCTTCCCCACCATCTGTCACCTCTCCTCCAGGGAATCTTCCACAAGAACGACCTaGGGCATGAGATCTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QDLVASFPTICHLSSRESSTRTT*GMRSGS Trigger: GGAACCAGATCTCATGCCCCAGGTCGTTCTTGTGGA...AGATTCCCTGGAGGAGAGGTGACAGATGGTGGGGAAGCTAGCTACTAAGTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| CDS-3UTR CCA 90 bp | TCACTATGGACTGACTTAGGAGGGAGTCGCAGCAGCCCAGCTGAGTCTAAATGGCTGGCGTATAGGTTCTaGGATCCGGAACCTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLWTDLGGSRSSPAESKWLAYRF*DPEPTA Trigger: TGCTGTAGGTTCCGGATCCCAGAACCTATACGCCAG...CCATTTAGACTCAGCTGGGCTGCTGCGACTCCCTCCTAAGTCAGTCCATAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTCTGGAATATGGTCATCTGCAAGTGCTCCTaGGCCTCCTTGGGGGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SPSCTLGACVCFLVWNMVICKCS*ASLGAC Trigger: GCATGCCCCCAAGGAGGCCCAGGAGCACTTGCAGAT...GACCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| 3UTR CAA 72 bp | ACCCGAGGCCTGAAGTCCTTCATGTACTCTTGGTGCTaGTGTGTGCTTCCTGGTCTGGAATATGGTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRGLKSFMYSWC*CVLPGLEYGPA Trigger: AGCAGGACCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTTCAGGCCTCGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR GCA 90 bp | GGAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTACAATCTTCTCCTTGTaGAGAGCATTGTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVPCTVASGVWCSTCDCGTIFSL*RALFSS Trigger: ACTGGAGAACAATGCTCTGCACAAGGAGAAGATTGT...ACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR GCA 90 bp | CCACGCTGGATTAAGCCCGCTGCATCCTCCTGGAGTTCCATGCACTGTTGCCTCACAATCTTCTCCTTGTaGAGAGCATTGTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRWIKPAASSWSSMHCCLTIFSL*RALFSS Trigger: ACTGGAGAACAATGCTCTGCACAAGGAGAAGATTGT...GAGGCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGGCTTAATCCAGCGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR GCA 90 bp | CTGAAGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTCTGGAATATCCGGTTCCCTCCAACTaGTGGTCCTTCTGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKSFMYSWCLCVLPGLEYPVPSN*WSFCSW Trigger: CCAGGAGCAGAAGGACCAGCAGTTGGAGGGAACCGG...ATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR GCA 90 bp | AGACACACCAGAAGAGGGTATCAGATCCCATTACAGATGGTTGTGAGCCAACATTCCAGTCCATCCACCTaGAGGAGCTTCTTGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RHTRRGYQIPLQMVVSQHSSPST*RSFLAT Trigger: GGTGGCCAAGAAGCTCCTGCAGGTGGATGGACTGGA...ATGTTGGCTCACAACCATCTGTAATGGGATCTGATACCCTCTTCTGGTGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTCTGGAATATGGTCCTGCCTCCTTGGGGGCATaGATTTGGCCTCTGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFMYSWCLCVLPGLEYGPASLGA*IWPLLF Trigger: AAAGAGCAGAGGCCAAATGCATGCCCCCAAGGAGGC...AGGACCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR GCA 90 bp | AAGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTCTGGAATATGGTAACTGCTGGTCCTTCTaGTCCTGGAAGCCTGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KSFMYSWCLCVLPGLEYGNCWSF*SWKPGS Trigger: CGAGCCAGGCTTCCAGGAGCAGAAGGACCAGCAGTT...ACCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR CCA 90 bp | GCCTCCTGCCCCACACTTCATTTACTGGGTGACAGAACCACATATCTATCTTCCTTGGGGGCATGCATTTaGCCTCTGCTCTTTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASCPTLHLLGDRTTYLSSLGACI*PLLFLA Trigger: AGCCAGAAAGAGCAGAGGCCAAATGCATGCCCCCAA...GGAAGATAGATATGTGGTTCTGTCACCCAGTAAATGAAGTGTGGGGCAGGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR CCA 90 bp | GAAGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTCTGGAATATGGGTTCCCTCCAACTGCTaGTCCTTCTGCTCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVLHVLLVLVCASWSGIWVPSNC*SFCSWK Trigger: CTTCCAGGAGCAGAAGGACCAGCAGTTGGAGGGAAC...CCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR GCA 90 bp | TGTGGGTGTAGTGATCGATGGGGGAGGGTTCAGCACACTGTGGGTGTAGTGATCACAATCTTCTCCTTGTaGAGAGCATTGTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CGCSDRWGRVQHTVGVVITIFSL*RALFSS Trigger: ACTGGAGAACAATGCTCTGCACAAGGAGAAGATTGT...GATCACTACACCCACAGTGTGCTGAACCCTCCCCCATCGATCACTACACCCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS-3UTR GCA 90 bp | GAAGTAAGAGTGACCCATGAGGGTAAAGCCAGGAAGAACCAGGTCTGTATTCCCGGACAGTCCCAGAGCTaGCTATCAGAGGAAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EVRVTHEGKARKNQVCIPGQSQS*LSEEMC Trigger: ACACATTTCCTCTGATAGGCAGCTCTGGGACTGTCC...GGGAATACAGACCTGGTTCTTCCTGGCTTTACCCTCATGGGTCACTCTTACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTCTGGAATATGGTCCATGCATTTGGCCTCTaGTCTTTCTGGCTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPSCTLGACVCFLVWNMVHAFGL*SFWLLS Trigger: GGACAGGAGCCAGAAAGAGCAGAGGCCAAATGCATG...GACCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| 3UTR CAA 72 bp | TGCCGCTGTTCTGTGCCTCTGCTTTTAATTAATCAATaGGTTAGGGCAGTGCAGTGGGGATGCTGGATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CRCSVPLLLINQ*VRAVQWGCWIG Trigger: CCCAATCCAGCATCCCCACTGCACTGCCCTAACCAATTGATTAATTAAAAGCAGAGGCACAGAACAGCGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR GCA 90 bp | CACACCAGAAGAGGGTATCAGATCCCATTACAGATGGTTGTGAGCCAACATGTGGGACAGTCCCAGAGCTaGCTATCAGAGGAAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HTRRGYQIPLQMVVSQHVGQSQS*LSEEMC Trigger: ACACATTTCCTCTGATAGGCAGCTCTGGGACTGTCC...CACATGTTGGCTCACAACCATCTGTAATGGGATCTGATACCCTCTTCTGGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR CCA 90 bp | AGACACACCAGAAGAGGGTATCAGATCCCATTACAGATGGTTGTGAGCCAACATGGCCTCTGCTCTTTCTaGCTCCTGTCCTTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RHTRRGYQIPLQMVVSQHGLCSF*LLSFLC Trigger: ACAGAGAAAGGACAGGAGCCAGAAAGAGCAGAGGCC...ATGTTGGCTCACAACCATCTGTAATGGGATCTGATACCCTCTTCTGGTGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| 3UTR CAA 72 bp | ATAGTACAGGGCTGTCTTTGGGACAATAGAAATGCTTaGGCGCAGGCAAGCGTGATAATGGCTGTACACGGT | + |
|
Preference number: 4 (lower is better) Translates to: IVQGCLWDNRNA*AQASVIMAVHG Trigger: ACCGTGTACAGCCATTATCACGCTTGCCTGCGCCAAAGCATTTCTATTGTCCCAAAGACAGCCCTGTACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTGACCCATGAGGGTAAAGCCAGGAAGAACCAGGTCTGTATTCCCAAGAGGACAATCTTCTCCTTGTaGAGAGCATTGTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVTHEGKARKNQVCIPKRTIFSL*RALFSS Trigger: ACTGGAGAACAATGCTCTGCACAAGGAGAAGATTGT...CCTCTTGGGAATACAGACCTGGTTCTTCCTGGCTTTACCCTCATGGGTCACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR CAA 72 bp | TCACATCTAAGCTTTCAATGGTTCGAGCTATTGTGGTaGAGCTTCAGCCTTTTCCTTCCCCCACCTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SHLSFQWFELLW*SFSLFLPPPPN Trigger: ATTTGGAGGTGGGGGAAGGAAAAGGCTGAAGCTCAACCACAATAGCTCGAACCATTGAAAGCTTAGATGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| 3UTR CAA 72 bp | AGCGTGATAATGGCTGTACACGGTAATGAATCCTTTTaGTTTGTGACAAAGCCTCAGGCCTATGTTACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVIMAVHGNESF*FVTKPQAYVTQ Trigger: CTGAGTAACATAGGCCTGAGGCTTTGTCACAAACAAAAAGGATTCATTACCGTGTACAGCCATTATCACGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
||
| CDS GCA 90 bp | TCCACGCCCCCGACCTTCTGCAGGCCCGAGAAGCTGGGGTCCCGCTaGCAGGCCTCCGTGTCCCGATCCACCACGCGCGCTTTCAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: STPPTFCRPEKLGSR*QASVSRSTTRAFSR Trigger: CCGGCTGAAAGCGCGCGTGGTGGATCGGGACACGGAGGCCTGGCAGCGGGACCCCAGCTTCTCGGGCCTGCAGAAGGTCGGGGGCGTGGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000140323.9 ENSMUST00000143817.8 |
||
| CDS CCA 90 bp | CGAAGGACACATCCACGCCCCCGACCTTCTGCAGGCCCGAGAAGCTaGGGTCCCGCTGCCAGGCCTCCGTGTCCCGATCCACCACGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RRTHPRPRPSAGPRS*GPAARPPCPDPPRA Trigger: CGCGCGTGGTGGATCGGGACACGGAGGCCTGGCAGCGGGACCCCAGCTTCTCGGGCCTGCAGAAGGTCGGGGGCGTGGATGTGTCCTTCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000140323.9 ENSMUST00000143817.8 |
||
| CDS-3UTR CAA 90 bp | TGGGATCCGGAACCTACAGCAGTGGTGGGTGAGGCGCACAGCGACCTCCAGGCTACCTGCAGGAGCTTCTaGGCCACCCCGATGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: WDPEPTAVVGEAHSDLQATCRSF*ATPMHG Trigger: GCCATGCATCGGGGTGGCCAAGAAGCTCCTGCAGGT...AGCCTGGAGGTCGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCGGATCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
||
| CDS-3UTR CAA 90 bp | CTGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCGCAGGACCTGCAGGAGCTTCTaGGCCACCCCGATGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LYSQEGKAELLAQVANRRTCRSF*ATPMHG Trigger: GCCATGCATCGGGGTGGCCAAGAAGCTCCTGCAGGT...CCTGCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTGAGGTCTCCAACCTGCAGGAGCTTCTaGGCCACCCCGATGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALLPLGCGAPPVTVVRSPTCRSF*ATPMHG Trigger: GCCATGCATCGGGGTGGCCAAGAAGCTCCTGCAGGT...TGGAGACCTCACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR CAA 90 bp | GGTCTGTATTCCCAAGAGGGCAAGGCAGAGCTGCTGGCACAGGTTGCCAACCGCCGCTTTCAGCCGGGCTaGTTCCCCTTTCCACAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: GLYSQEGKAELLAQVANRRFQPG*FPFPQR Trigger: TCGCTGTGGAAAGGGGAACAAGCCCGGCTGAAAGCG...GCGGTTGGCAACCTGTGCCAGCAGCTCTGCCTTGCCCTCTTGGGAATACAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000143817.8 |
||
| CDS-3UTR CAA 90 bp | CATCCTCCTGGAGTTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTTGCTCCTGGGCCTCCTaGGGGGCATGCATTTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HPPGVPCTVASGVWCSTCCSWAS*GACIWP Trigger: AGGCCAAATGCATGCCCCCAAGGAGGCCCAGGAGCA...ACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAACTCCAGGAGGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR CAA 90 bp | CACTGTGGGTGTAGTGATCGATGGGGGAGGGTTCAGCACACTGTGGGTGTAGTGACCTGCAGGAGCTTCTaGGCCACCCCGATGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: HCGCSDRWGRVQHTVGVVTCRSF*ATPMHG Trigger: GCCATGCATCGGGGTGGCCAAGAAGCTCCTGCAGGT...CACTACACCCACAGTGTGCTGAACCCTCCCCCATCGATCACTACACCCACAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS-3UTR CAA 90 bp | TTCCATGCACTGTTGCCTCTGGGGTGTGGTGCTCCACCTGTGACTGTGGTGAGGCGCTTTCAGCCGGGCTaGTTCCCCTTTCCACAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: FHALLPLGCGAPPVTVVRRFQPG*FPFPQR Trigger: TCGCTGTGGAAAGGGGAACAAGCCCGGCTGAAAGCG...CCTCACCACAGTCACAGGTGGAGCACCACACCCCAGAGGCAACAGTGCATGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000143817.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGCTTCCTGGTCTGGAATATGGTCCTGCTGGGGCATGGTGACCACACTGACTGCTCCTGGGCCTCCTaGGGGGCATGCATTTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VCFLVWNMVLLGHGDHTDCSWAS*GACIWP Trigger: AGGCCAAATGCATGCCCCCAAGGAGGCCCAGGAGCA...GTCAGTGTGGTCACCATGCCCCAGCAGGACCATATTCCAGACCAGGAAGCACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGCTTCCTGGTCTGGAATATGGTCCTGCTGGGGCATGGTGACCACACTGTGCTCCTGGGCCTCCTaGGGGGCATGCATTTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VCASWSGIWSCWGMVTTLCSWAS*GACIWP Trigger: AGGCCAAATGCATGCCCCCAAGGAGGCCCAGGAGCA...CAGTGTGGTCACCATGCCCCAGCAGGACCATATTCCAGACCAGGAAGCACACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR CAA 90 bp | CCACGCTGGATTAAGCCCGCTGCATCCTCCTGGAGTTCCATGCACTGTTGCCTCCTTGGGGGCATGCATTaGGCCTCTGCTCTTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRWIKPAASSWSSMHCCLLGGMH*ASALSG Trigger: GCCAGAAAGAGCAGAGGCCAAATGCATGCCCCCAAG...GAGGCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGGCTTAATCCAGCGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 |
||
| CDS-3UTR CAA 90 bp | CAGGACTTAGTAGCTAGCTTCCCCACCATCTGTCACCTCTCCTCCAGGGAATCTACCTGCAGGAGCTTCTaGGCCACCCCGATGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: QDLVASFPTICHLSSRESTCRSF*ATPMHG Trigger: GCCATGCATCGGGGTGGCCAAGAAGCTCCTGCAGGT...AGATTCCCTGGAGGAGAGGTGACAGATGGTGGGGAAGCTAGCTACTAAGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000143817.8 |
||
| CDS GCA 90 bp | ATAAGAAGCAGGCTGTCCTTTCTCTGTGCAGGAGCCACCCCAAGCTaGCCTAGAGTCCTTCGGATGTACTCTCGAGAGCGGATGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IRSRLSFLCAGATPS*PRVLRMYSRERMSA Trigger: GGCTGACATCCGCTCTCGAGAGTACATCCGAAGGACTCTAGGGCAGCTTGGGGTGGCTCCTGCACAGAGAAAGGACAGCCTGCTTCTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS GCA 90 bp | CCATCCACAAGAACGACCTGGGGCATGAGATCTGGTTCCTTCTCTTaGAGCCGCTGTACCAACTCCACCAGGAAAGGGACCTCAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSTRTTWGMRSGSFS*SRCTNSTRKGTSGK Trigger: CTTCCCTGAGGTCCCTTTCCTGGTGGAGTTGGTACAGCGGCTGCAAGAGAAGGAACCAGATCTCATGCCCCAGGTCGTTCTTGTGGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143817.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGGGATCCGGAACCTACAGCAGTGGTGGGTGAGGCGCACAGCGACCTCCAGAGCACAATCTTCTCCTaGTGCAGAGCATTGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FWDPEPTAVVGEAHSDLQSTIFS*CRALFS Trigger: GGAGAACAATGCTCTGCACAAGGAGAAGATTGTGCT...CTGGAGGTCGCTGTGCGCCTCACCCACCACTGCTGTAGGTTCCGGATCCCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGGTGGGTGAGGCGCACAGCGACCTCCAGGCTTATTCTGTGGCCCACAGAGAGCACAATCTTCTCCTaGTGCAGAGCATTGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QWWVRRTATSRLILWPTESTIFS*CRALFS Trigger: GGAGAACAATGCTCTGCACAAGGAGAAGATTGTGCT...CTCTGTGGGCCACAGAATAAGCCTGGAGGTCGCTGTGCGCCTCACCCACCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
||
| CDS TCA 90 bp | GTTGGTGAAGCACCCCGTTTCCATCCACAAGAACGACCTGGGGCATaGGATCTGGTTCCTTCTCTTGCAGCCGCTGTACCAACTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: VGEAPRFHPQERPGA*DLVPSLAAAVPTPP Trigger: TGGTGGAGTTGGTACAGCGGCTGCAAGAGAAGGAACCAGATCTCATGCCCCAGGTCGTTCTTGTGGATGGAAACGGGGTGCTTCACCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064513.9 ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTGGCGTATAGGTTCTGGGATCCGGAACCTACAGCAGTGGTGGGTGAGGCGAGCACAATCTTCTCCTaGTGCAGAGCATTGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLAYRFWDPEPTAVVGEASTIFS*CRALFS Trigger: GGAGAACAATGCTCTGCACAAGGAGAAGATTGTGCT...CGCCTCACCCACCACTGCTGTAGGTTCCGGATCCCAGAACCTATACGCCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
||
| CDS GCA 90 bp | GGAAATGTGTCTCCTCCGGCCTGCAGGAGCACAATCTTCTCCTTGTaGAGAGCATTGTTCTCCAGTCCATCCACCTGCAGGAGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GNVSPPACRSTIFSL*RALFSSPSTCRSFL Trigger: CAAGAAGCTCCTGCAGGTGGATGGACTGGAGAACAATGCTCTGCACAAGGAGAAGATTGTGCTCCTGCAGGCCGGAGGAGACACATTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000064513.9 ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000140323.9 ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
||
| CDS-3UTR CAA 90 bp | CAGCACACTGTGGGTGTAGTGATCGATGGGGGAGGGTTCAGCACACTGTGGGTGAGCACAATCTTCTCCTaGTGCAGAGCATTGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QHTVGVVIDGGGFSTLWVSTIFS*CRALFS Trigger: GGAGAACAATGCTCTGCACAAGGAGAAGATTGTGCT...CACCCACAGTGTGCTGAACCCTCCCCCATCGATCACTACACCCACAGTGTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064513.9 |
||
| CDS-3UTR CAA 90 bp | CGCTGGATTAAGCCCGCTGCATCCTCCTGGAGTTCCATGCACTGTTGCCTCTGGAGCACAATCTTCTCCTaGTGCAGAGCATTGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RWIKPAASSWSSMHCCLWSTIFS*CRALFS Trigger: GGAGAACAATGCTCTGCACAAGGAGAAGATTGTGCT...CCAGAGGCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGGCTTAATCCAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR CAA 90 bp | ATTAAGCCCGCTGCATCCTCCTGGAGTTCCATGCACTGTTGCCTCTGGGGTGTGAGCACAATCTTCTCCTaGTGCAGAGCATTGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IKPAASSWSSMHCCLWGVSTIFS*CRALFS Trigger: GGAGAACAATGCTCTGCACAAGGAGAAGATTGTGCT...CACACCCCAGAGGCAACAGTGCATGGAACTCCAGGAGGATGCAGCGGGCTTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
||
| CDS-3UTR CAA 90 bp | GCCTCCTGCCCCACACTTCATTTACTGGGTGACAGAACCACATATCTATCTTCCCTTGGGGGCATGCATTaGGCCTCTGCTCTTTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: ASCPTLHLLGDRTTYLSSLGGMH*ASALSG Trigger: GCCAGAAAGAGCAGAGGCCAAATGCATGCCCCCAAG...GGAAGATAGATATGTGGTTCTGTCACCCAGTAAATGAAGTGTGGGGCAGGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| CDS-3UTR CAA 90 bp | AGACACACCAGAAGAGGGTATCAGATCCCATTACAGATGGTTGTGAGCCAACATCTTGGGGGCATGCATTaGGCCTCTGCTCTTTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: RHTRRGYQIPLQMVVSQHLGGMH*ASALSG Trigger: GCCAGAAAGAGCAGAGGCCAAATGCATGCCCCCAAG...ATGTTGGCTCACAACCATCTGTAATGGGATCTGATACCCTCTTCTGGTGTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 |
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| CDS-3UTR CAA 90 bp | AAGTCCTTCATGTACTCTTGGTGCTTGTGTGTGCTTCCTGGTCTGGAATATGGTAGCACAATCTTCTCCTaGTGCAGAGCATTGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: KSFMYSWCLCVLPGLEYGSTIFS*CRALFS Trigger: GGAGAACAATGCTCTGCACAAGGAGAAGATTGTGCT...ACCATATTCCAGACCAGGAAGCACACACAAGCACCAAGAGTACATGAAGGACTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000143817.8 ENSMUST00000153204.9 |
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| CDS GCA 72 bp | CCGACCTTCTGCAGGCCCGAGAAGCTGGGGTCCCGCTaGCAGGCCTCCGTGTCCCGATCCACCACGCGCGCT | + |
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Preference number: 6 (lower is better) Translates to: PTFCRPEKLGSR*QASVSRSTTRA Trigger: AGCGCGCGTGGTGGATCGGGACACGGAGGCCTGGCAGCGGGACCCCAGCTTCTCGGGCCTGCAGAAGGTCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000140323.9 ENSMUST00000143817.8 |
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| CDS CCA 72 bp | CATCCACGCCCCCGACCTTCTGCAGGCCCGAGAAGCTaGGGTCCCGCTGCCAGGCCTCCGTGTCCCGATCCA | + |
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Preference number: 6 (lower is better) Translates to: HPRPRPSAGPRS*GPAARPPCPDP Trigger: TGGATCGGGACACGGAGGCCTGGCAGCGGGACCCCAGCTTCTCGGGCCTGCAGAAGGTCGGGGGCGTGGATG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000140323.9 ENSMUST00000143817.8 |
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| CDS GCA 72 bp | CCTTTCACGAAGGACACATCCACGCCCCCGACCTTCTaGAGGCCCGAGAAGCTGGGGTCCCGCTGCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: PFTKDTSTPPTF*RPEKLGSRCQA Trigger: GGCCTGGCAGCGGGACCCCAGCTTCTCGGGCCTGCAGAAGGTCGGGGGCGTGGATGTGTCCTTCGTGAAAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106244.9 ENSMUST00000140323.9 ENSMUST00000143817.8 |
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| CDS CCA 72 bp | TGTAAGGACACCAAGGTGGCAGGCCACCCCGAAGCCTaGGGCATGAGATCTGGTTCCTTCTCTTGCAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: CKDTKVAGHPEA*GMRSGSFSCSR Trigger: GCGGCTGCAAGAGAAGGAACCAGATCTCATGCCCCAGGCTTCGGGGTGGCCTGCCACCTTGGTGTCCTTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153204.9 ENSMUST00000154370.8 |
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| CDS CAA 90 bp | TCTCCTCCGGCCTGCAGGAGCACAATCTTCTCCTTGTGCAGAGCATaGTTCTCCAGTCCATCCACCTGCAGGAGCTTCTTGGCCACCCCG | + |
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Preference number: 6 (lower is better) Translates to: SPPACRSTIFSLCRA*FSSPSTCRSFLATP Trigger: CGGGGTGGCCAAGAAGCTCCTGCAGGTGGATGGACTGGAGAACAATGCTCTGCACAAGGAGAAGATTGTGCTCCTGCAGGCCGGAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000064513.9 ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000140323.9 ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
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| CDS GCA 72 bp | TCTCCTCCGGCCTGCAGGAGCACAATCTTCTCCTTGTaGAGAGCATTGTTCTCCAGTCCATCCACCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SPPACRSTIFSL*RALFSSPSTCR Trigger: CCTGCAGGTGGATGGACTGGAGAACAATGCTCTGCACAAGGAGAAGATTGTGCTCCTGCAGGCCGGAGGAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000064513.9 ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000140323.9 ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
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| CDS CAA 90 bp | TCCATCCACAAGAACGACCTGGGGCATGAGATCTGGTTCCTTCTCTaGCAGCCGCTGTACCAACTCCACCAGGAAAGGGACCTCAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SIHKNDLGHEIWFLL*QPLYQLHQERDLRE Trigger: TTCCCTGAGGTCCCTTTCCTGGTGGAGTTGGTACAGCGGCTGCAAGAGAAGGAACCAGATCTCATGCCCCAGGTCGTTCTTGTGGATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143817.8 |
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| CDS CAA 90 bp | AGAGGAAATGTGTCTCCTCCGGCCTGCAGGAGCACAATCTTCTCCTaGTGCAGAGCATTGTTCTCCAGTCCATCCACCTGCAGGAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RGNVSPPACRSTIFS*CRALFSSPSTCRSF Trigger: GAAGCTCCTGCAGGTGGATGGACTGGAGAACAATGCTCTGCACAAGGAGAAGATTGTGCTCCTGCAGGCCGGAGGAGACACATTTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000064513.9 ENSMUST00000106244.9 ENSMUST00000106245.9 ENSMUST00000129327.9 ENSMUST00000140323.9 ENSMUST00000143817.8 ENSMUST00000153204.9 ENSMUST00000154370.8 |
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