Pregenerated sensors for ENDOU (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022468Ensembl transcript IDs: ENSMUST00000023105.5, ENSMUST00000100249.10, ENSMUST00000230430.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGCGGCCCTGGCAGGAGCTCGGTGCGGAGTAGAGGTGGCTGGTTaGGATCTTGTCCTCTGGATCCAGGAATGCCTCTGGCTCTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: AAALAGARCGVEVAG*DLVLWIQECLWLWG Trigger: CCCCCAGAGCCAGAGGCATTCCTGGATCCAGAGGACAAGATCCCAACCAGCCACCTCTACTCCGCACCGAGCTCCTGCCAGGGCCGCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR CCA 90 bp | CCCGGCAGCGGCCCTGGCAGGAGCTCGGTGCGGAGTAGAGGTGGCTaGTTGGGATCTTGTCCTCTGGATCCAGGAATGCCTCTGGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: PGSGPGRSSVRSRGG*LGSCPLDPGMPLAL Trigger: CAGAGCCAGAGGCATTCCTGGATCCAGAGGACAAGATCCCAACCAGCCACCTCTACTCCGCACCGAGCTCCTGCCAGGGCCGCTGCCGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR TCA 90 bp | AGTGAAGAGCGGCTCTGGGCTTCGATCCACTTGGTTCCCCGTCTCTaGTGGGGAGATCCGGTTCTGACTGTTGAGCACAATGTCTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: SEERLWASIHLVPRL*WGDPVLTVEHNVFL Trigger: AAGGAAGACATTGTGCTCAACAGTCAGAACCGGATCTCCCCATCAGAGACGGGGAACCAAGTGGATCGAAGCCCAGAGCCGCTCTTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR CCA 90 bp | ACCACCACACAGACTGTCAAAATCCTCACAGCAGTTTCCAAACTCTaGGCAGCGGTCATTACAGTGGCAAGGGTGGTGCTTGTCGTAGGC | + |
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Preference number: 1 (lower is better) Translates to: TTTQTVKILTAVSKL*AAVITVARVVLVVG Trigger: GCCTACGACAAGCACCACCCTTGCCACTGTAATGACCGCTGCCCAGAGTTTGGAAACTGCTGTGAGGATTTTGACAGTCTGTGTGGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR CCA 90 bp | ACACCACGTAGGCTGTGGCAATGTACTTCTTGCCATTTCCGTAGGTaGTCTTATCCCAGGTGTAGGTCTGGATGGCCAGAGGATAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: TPRRLWQCTSCHFRR*SYPRCRSGWPEDSH Trigger: GTGGCTATCCTCTGGCCATCCAGACCTACACCTGGGATAAGACCACCTACGGAAATGGCAAGAAGTACATTGCCACAGCCTACGTGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR CCA 90 bp | CAGCTGGCTGCAGGCTCTATTGGGAAGAAGACACCACGTAGGCTGTaGCAATGTACTTCTTGCCATTTCCGTAGGTGGTCTTATCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: QLAAGSIGKKTPRRL*QCTSCHFRRWSYPR Trigger: CCTGGGATAAGACCACCTACGGAAATGGCAAGAAGTACATTGCCACAGCCTACGTGGTGTCTTCTTCCCAATAGAGCCTGCAGCCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR TCA 90 bp | AGCTCCTCCTTAGTGACGGCATCGCTGCTGTGGGAGAAACCCTCATaGTCACCACCACACAGACTGTCAAAATCCTCACAGCAGTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: SSSLVTASLLWEKPS*SPPHRLSKSSQQFP Trigger: TGGAAACTGCTGTGAGGATTTTGACAGTCTGTGTGGTGGTGATCATGAGGGTTTCTCCCACAGCAGCGATGCCGTCACTAAGGAGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR TCA 90 bp | CCACTTGGTTCCCCGTCTCTGATGGGGAGATCCGGTTCTGACTGTTaGGCACAATGTCTTCCTTCTGGGCTTTGTTGGTATCTACCCTGT | + |
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Preference number: 1 (lower is better) Translates to: PLGSPSLMGRSGSDC*AQCLPSGLCWYLPC Trigger: ACAGGGTAGATACCAACAAAGCCCAGAAGGAAGACATTGTGCTCAACAGTCAGAACCGGATCTCCCCATCAGAGACGGGGAACCAAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR TCA 90 bp | CTTCGATCCACTTGGTTCCCCGTCTCTGATGGGGAGATCCGGTTCTaGCTGTTGAGCACAATGTCTTCCTTCTGGGCTTTGTTGGTATCT | + |
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Preference number: 1 (lower is better) Translates to: LRSTWFPVSDGEIRF*LLSTMSSFWALLVS Trigger: AGATACCAACAAAGCCCAGAAGGAAGACATTGTGCTCAACAGTCAGAACCGGATCTCCCCATCAGAGACGGGGAACCAAGTGGATCGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR TCA 90 bp | CCTCCTTCTCCTGCAGGTAGAAGCGGATCCAGTTATGAAAGCCAGTaGCCTTGCCTTTCTTCACTTCGCCAGAGAAGACATGTTCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: PPSPAGRSGSSYESQ*PCLSSLRQRRHVQS Trigger: GCTTTGAACATGTCTTCTCTGGCGAAGTGAAGAAAGGCAAGGTCACTGGCTTTCATAACTGGATCCGCTTCTACCTGCAGGAGAAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR GCA 90 bp | CGCCAGAGAAGACATGTTCAAAGCCACTCGAGTCCCCTTCATCATTaGCTCTCGAGTACAGCCCAAACCACATGTTCTTCAAATCGTCCA | + |
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Preference number: 1 (lower is better) Translates to: RQRRHVQSHSSPLHH*LSSTAQTTCSSNRP Trigger: TGGACGATTTGAAGAACATGTGGTTTGGGCTGTACTCGAGAGGCAATGATGAAGGGGACTCGAGTGGCTTTGAACATGTCTTCTCTGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR GCA 90 bp | TCTATTGGGAAGAAGACACCACGTAGGCTGTGGCAATGTACTTCTTaGCATTTCCGTAGGTGGTCTTATCCCAGGTGTAGGTCTGGATGG | + |
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Preference number: 1 (lower is better) Translates to: SIGKKTPRRLWQCTS*HFRRWSYPRCRSGW Trigger: CCATCCAGACCTACACCTGGGATAAGACCACCTACGGAAATGGCAAGAAGTACATTGCCACAGCCTACGTGGTGTCTTCTTCCCAATAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR CCA 90 bp | ACTGAACATCTGCAAGTGGGAAACTTCTGGAAGCAGATGCTGAGTTaGCCACACAGACGTTTAGGACTGAGGAAACCACATACCCTAGCC | + |
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Preference number: 1 (lower is better) Translates to: TEHLQVGNFWKQMLS*PHRRLGLRKPHTLA Trigger: GGCTAGGGTATGTGGTTTCCTCAGTCCTAAACGTCTGTGTGGCCAACTCAGCATCTGCTTCCAGAAGTTTCCCACTTGCAGATGTTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| 3UTR CCA 90 bp | ACGCATGTCTGTAACTGCACTGAACATCTGCAAGTGGGAAACTTCTaGAAGCAGATGCTGAGTTGGCCACACAGACGTTTAGGACTGAGG | + |
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Preference number: 1 (lower is better) Translates to: THVCNCTEHLQVGNF*KQMLSWPHRRLGLR Trigger: CCTCAGTCCTAAACGTCTGTGTGGCCAACTCAGCATCTGCTTCCAGAAGTTTCCCACTTGCAGATGTTCAGTGCAGTTACAGACATGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| 3UTR CAA 90 bp | GGCAGCGGCCCTGGCAGGAGCTCGGTGCGGAGTAGAGGTGGCTGGTaGGGATCTTGTCCTCTGGATCCAGGAATGCCTCTGGCTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GSGPGRSSVRSRGGW*GSCPLDPGMPLALG Trigger: CCCCAGAGCCAGAGGCATTCCTGGATCCAGAGGACAAGATCCCAACCAGCCACCTCTACTCCGCACCGAGCTCCTGCCAGGGCCGCTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGCCATCCCAATTGAACTGCATGGCCAGGACATCGGGGTAGGAGTCCCAGGGCTCTGGATCCAGGAATaGCTCTGGCTCTGGGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: VAIPIELHGQDIGVGVPGLWIQE*LWLWGS Trigger: GGACCCCCAGAGCCAGAGGCATTCCTGGATCCAGAG...CCCTGGGACTCCTACCCCGATGTCCTGGCCATGCAGTTCAATTGGGATGGCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR-3UTR CCA 90 bp | CAATGTCTTCCTTCTGGGCTTTGTTGGTATCTACCCTGTAGATGGTCTCGGAGATCCCGGCAGCGGCCCTaGCAGGAGCTCGGTGCGGAG | + |
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Preference number: 2 (lower is better) Translates to: QCLPSGLCWYLPCRWSRRSRQRP*QELGAE Trigger: CTCCGCACCGAGCTCCTGCCAGGGCCGCTGCCGGGA...TCTCCGAGACCATCTACAGGGTAGATACCAACAAAGCCCAGAAGGAAGACATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCTGCCCTCAGGACCCCAGCTGGCTGCAGGCTCTATTGGGAAGAAGACACGTAGAGGTGGCTGGTTaGGATCTTGTCCTCTGGATC | + |
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Preference number: 2 (lower is better) Translates to: SLCPQDPSWLQALLGRRHVEVAG*DLVLWI Trigger: GATCCAGAGGACAAGATCCCAACCAGCCACCTCTAC...GTGTCTTCTTCCCAATAGAGCCTGCAGCCAGCTGGGGTCCTGAGGGCAGAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR-3UTR GCA 90 bp | ACATACCTCCCAACCCGTGACTCTGCACTGTCCTTGGCTGACTCTCTAAGATTCATAGCACCAGGACCCTaGTTGTCCCTCTGCCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TYLPTRDSALSLADSLRFIAPGP*LSLCPQ Trigger: CTGAGGGCAGAGGGACAAGCAGGGTCCTGGTGCTAT...GAATCTTAGAGAGTCAGCCAAGGACAGTGCAGAGTCACGGGTTGGGAGGTATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| 3UTR-3UTR GCA 90 bp | TTGGGAAGAAGACACCACGTAGGCTGTGGCAATGTACTTCTTGCCATTTCCGTACTGGCAGGAGCTCGGTaGGGAGTAGAGGTGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LGRRHHVGCGNVLLAISVLAGAR*GVEVAG Trigger: ACCAGCCACCTCTACTCCGCACCGAGCTCCTGCCAG...TACGGAAATGGCAAGAAGTACATTGCCACAGCCTACGTGGTGTCTTCTTCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGCCATCCCAATTGAACTGCATGGCCAGGACATCGGGGTAGGAGTCCCAGGGAGTTATGAAAGCCAGTaGCCTTGCCTTTCTTCACTT | + |
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Preference number: 2 (lower is better) Translates to: VAIPIELHGQDIGVGVPGSYESQ*PCLSSL Trigger: AAGTGAAGAAAGGCAAGGTCACTGGCTTTCATAACT...CCCTGGGACTCCTACCCCGATGTCCTGGCCATGCAGTTCAATTGGGATGGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGGCTGCAGGCTCTATTGGGAAGAAGACACCACGTAGGCTGTGGCAATGTTACAAAACTGAGCTCTaGGATTCCTCCCAGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: QLAAGSIGKKTPRRLWQCYKTEL*DSSQTP Trigger: AGGAGTCTGGGAGGAATCCCAGAGCTCAGTTTTGTA...ACATTGCCACAGCCTACGTGGTGTCTTCTTCCCAATAGAGCCTGCAGCCAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR-3UTR GCA 90 bp | AATGTACTTCTTGCCATTTCCGTAGGTGGTCTTATCCCAGGTGTAGGTCTGGATATAGCACCAGGACCCTaGTTGTCCCTCTGCCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: NVLLAISVGGLIPGVGLDIAPGP*LSLCPQ Trigger: CTGAGGGCAGAGGGACAAGCAGGGTCCTGGTGCTAT...ATCCAGACCTACACCTGGGATAAGACCACCTACGGAAATGGCAAGAAGTACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTCCTCCTTTGATGCTCAGCCATCCTCCTGTGAGGGGAATTCTTTTGAAATGAGGCTGAGTCACAGCTaGGGAGTGTGTGCACTGGTG | + |
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Preference number: 2 (lower is better) Translates to: LSSFDAQPSSCEGNSFEMRLSHS*GVCALV Trigger: CACCAGTGCACACACTCCGCAGCTGTGACTCAGCCT...CATTTCAAAAGAATTCCCCTCACAGGAGGATGGCTGAGCATCAAAGGAGGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| 3UTR-3UTR CCA 90 bp | AGACACCACGTAGGCTGTGGCAATGTACTTCTTGCCATTTCCGTAGGTGGTCTTGAATGCCTCTGGCTCTaGGGGTCCTTCTTCAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: RHHVGCGNVLLAISVGGLECLWL*GSFFSY Trigger: ATAGCTGAAGAAGGACCCCCAGAGCCAGAGGCATTC...AAGACCACCTACGGAAATGGCAAGAAGTACATTGCCACAGCCTACGTGGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR CAA 90 bp | TCGCCAGAGAAGACATGTTCAAAGCCACTCGAGTCCCCTTCATCATaGCCTCTCGAGTACAGCCCAAACCACATGTTCTTCAAATCGTCC | + |
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Preference number: 2 (lower is better) Translates to: SPEKTCSKPLESPSS*PLEYSPNHMFFKSS Trigger: GGACGATTTGAAGAACATGTGGTTTGGGCTGTACTCGAGAGGCAATGATGAAGGGGACTCGAGTGGCTTTGAACATGTCTTCTCTGGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCTCGGTTCTAAGGCTTGCTTCTTTGGGACCCTACACAAGGCTGAGTCACTTCCTTTTACAAAACTaGGCTCTGGGATTCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: TCSVLRLASLGPYTRLSHFLLQN*ALGFLP Trigger: TGGGAGGAATCCCAGAGCTCAGTTTTGTAAAAGGAA...GTGACTCAGCCTTGTGTAGGGTCCCAAAGAAGCAAGCCTTAGAACCGAGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| 3UTR CAA 90 bp | CACAAGGCTGAGTCACAGCTGCGGAGTGTGTGCACTGGTGGCCACTaGGTAATCCTGAATTTCTACTACCTGTTCTCCCTAAAAACAACT | + |
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Preference number: 2 (lower is better) Translates to: HKAESQLRSVCTGGH*VILNFYYLFSLKTT Trigger: AGTTGTTTTTAGGGAGAACAGGTAGTAGAAATTCAGGATTACCAAGTGGCCACCAGTGCACACACTCCGCAGCTGTGACTCAGCCTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| 3UTR-3UTR GCA 90 bp | TTTGAAATGAAACAAAACTGTGGAATCAAACGCATGTCTGTAACTGCACTGAACCCCTGCTTGTCCCTCTaGCCTCAGGACCCCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FEMKQNCGIKRMSVTALNPCLSL*PQDPSW Trigger: CCAGCTGGGGTCCTGAGGGCAGAGGGACAAGCAGGG...GTTCAGTGCAGTTACAGACATGCGTTTGATTCCACAGTTTTGTTTCATTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCGGTTCTAAGGCTTGCTTCTTTGGGACCCTACACAAGGCTGAGTCACAGTTTCTCTCTCCCAAGTaGGCATTTCTAGATTCGAGA | + |
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Preference number: 2 (lower is better) Translates to: LLGSKACFFGTLHKAESQFLSPK*AFLDSR Trigger: TCTCGAATCTAGAAATGCCCACTTGGGAGAGAGAAA...CTGTGACTCAGCCTTGTGTAGGGTCCCAAAGAAGCAAGCCTTAGAACCGAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| 3UTR-3UTR TCA 90 bp | TTGGGAAGAAGACACCACGTAGGCTGTGGCAATGTACTTCTTGCCATTTCCGTATTCCTTTTACAAAACTaGGCTCTGGGATTCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LGRRHHVGCGNVLLAISVFLLQN*ALGFLP Trigger: TGGGAGGAATCCCAGAGCTCAGTTTTGTAAAAGGAA...TACGGAAATGGCAAGAAGTACATTGCCACAGCCTACGTGGTGTCTTCTTCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTCCTCCTTTGATGCTCAGCCATCCTCCTGTGAGGGGAATTCTTTTGAAATGTACAAAACTGAGCTCTaGGATTCCTCCCAGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: LSSFDAQPSSCEGNSFEMYKTEL*DSSQTP Trigger: AGGAGTCTGGGAGGAATCCCAGAGCTCAGTTTTGTA...CATTTCAAAAGAATTCCCCTCACAGGAGGATGGCTGAGCATCAAAGGAGGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTGACCTTGCCTTTCTTCACTTCGCCAGAGAAGACATGTTCAAAGCCACTTTTCTCTCTCCCAAGTaGGCATTTCTAGATTCGAGA | + |
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Preference number: 2 (lower is better) Translates to: ASDLAFLHFAREDMFKATFLSPK*AFLDSR Trigger: TCTCGAATCTAGAAATGCCCACTTGGGAGAGAGAAA...AGTGGCTTTGAACATGTCTTCTCTGGCGAAGTGAAGAAAGGCAAGGTCACTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTGACCTTGCCTTTCTTCACTTCGCCAGAGAAGACATGTTCAAAGCCACTACAATGTCTTCCTTCTaGGCTTTGTTGGTATCTACC | + |
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Preference number: 2 (lower is better) Translates to: ASDLAFLHFAREDMFKATTMSSF*ALLVST Trigger: GGTAGATACCAACAAAGCCCAGAAGGAAGACATTGT...AGTGGCTTTGAACATGTCTTCTCTGGCGAAGTGAAGAAAGGCAAGGTCACTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATGAAACAAAACTGTGGAATCAAACGCATGTCTGTAACTGCACTGAACATCTGCACTGTCCTTGGCTaGCTCTCTAAGATTCACCTG | + |
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Preference number: 2 (lower is better) Translates to: EMKQNCGIKRMSVTALNICTVLG*LSKIHL Trigger: CAGGTGAATCTTAGAGAGTCAGCCAAGGACAGTGCA...GATGTTCAGTGCAGTTACAGACATGCGTTTGATTCCACAGTTTTGTTTCATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| 3UTR GCA 72 bp | GTAGGCTTCCCGGCAGCGGCCCTGGCAGGAGCTCGGTaGGGAGTAGAGGTGGCTGGTTGGGATCTTGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: VGFPAAALAGAR*GVEVAGWDLVL Trigger: GAGGACAAGATCCCAACCAGCCACCTCTACTCCGCACCGAGCTCCTGCCAGGGCCGCTGCCGGGAAGCCTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR CCA 72 bp | ACCTCCCTGAGGAAGACACCCTGCTCCTCCAGTTGCTaGGCACTGAAATGCTCCCCGTGGCCTGTGGCCCGC | + |
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Preference number: 3 (lower is better) Translates to: TSLRKTPCSSSC*ALKCSPWPVAR Trigger: GCGGGCCACAGGCCACGGGGAGCATTTCAGTGCCCAGCAACTGGAGGAGCAGGGTGTCTTCCTCAGGGAGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR CCA 72 bp | TGCGGAGTAGAGGTGGCTGGTTGGGATCTTGTCCTCTaGATCCAGGAATGCCTCTGGCTCTGGGGGTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: CGVEVAGWDLVL*IQECLWLWGSF Trigger: GAAGGACCCCCAGAGCCAGAGGCATTCCTGGATCCAGAGGACAAGATCCCAACCAGCCACCTCTACTCCGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR-3UTR CAA 90 bp | GAGATCTTGAGGGCCGCTCCTTTCTCTAGGCAGAGAGAGCTCTGTTTCCCAGTTGCACCAGGACCCTGCTaGTCCCTCTGCCCTCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: EILRAAPFSRQRELCFPVAPGPC*SLCPQD Trigger: GTCCTGAGGGCAGAGGGACAAGCAGGGTCCTGGTGC...AACTGGGAAACAGAGCTCTCTCTGCCTAGAGAAAGGAGCGGCCCTCAAGATCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| 3UTR-3UTR CAA 90 bp | TGCTGTGGGAGAAACCCTCATGATCACCACCACACAGACTGTCAAAATCCTCACGCACCAGGACCCTGCTaGTCCCTCTGCCCTCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: CCGRNPHDHHHTDCQNPHAPGPC*SLCPQD Trigger: GTCCTGAGGGCAGAGGGACAAGCAGGGTCCTGGTGC...GTGAGGATTTTGACAGTCTGTGTGGTGGTGATCATGAGGGTTTCTCCCACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR TCA 72 bp | CGGCTCTGGGCTTCGATCCACTTGGTTCCCCGTCTCTaGTGGGGAGATCCGGTTCTGACTGTTGAGCACAAT | + |
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Preference number: 3 (lower is better) Translates to: RLWASIHLVPRL*WGDPVLTVEHN Trigger: ATTGTGCTCAACAGTCAGAACCGGATCTCCCCATCAGAGACGGGGAACCAAGTGGATCGAAGCCCAGAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR-3UTR CAA 90 bp | AGTTCCTTCATGACAGCCGTCTTCATGACCTCCCTGAGGAAGACACCCTGCTCCAGTAGAGGTGGCTGGTaGGGATCTTGTCCTCTGGAT | + |
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Preference number: 3 (lower is better) Translates to: SSFMTAVFMTSLRKTPCSSRGGW*GSCPLD Trigger: ATCCAGAGGACAAGATCCCAACCAGCCACCTCTACT...GGAGCAGGGTGTCTTCCTCAGGGAGGTCATGAAGACGGCTGTCATGAAGGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR CCA 72 bp | AGTGGCTTTAATTGGAAACTTGACGCCTCTGAGCTGTaGTACAAGCCTGGCTCTGCAGGGTCCACATCTGGC | + |
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Preference number: 3 (lower is better) Translates to: SGFNWKLDASEL*YKPGSAGSTSG Trigger: GCCAGATGTGGACCCTGCAGAGCCAGGCTTGTACCACAGCTCAGAGGCGTCAAGTTTCCAATTAAAGCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| 3UTR CCA 72 bp | GGTTGGGATCTTGTCCTCTGGATCCAGGAATGCCTCTaGCTCTGGGGGTCCTTCTTCAGCTATGACATAGGA | + |
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Preference number: 3 (lower is better) Translates to: GWDLVLWIQECL*LWGSFFSYDIG Trigger: TCCTATGTCATAGCTGAAGAAGGACCCCCAGAGCCAGAGGCATTCCTGGATCCAGAGGACAAGATCCCAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR CCA 72 bp | AGGCTGTGGCAATGTACTTCTTGCCATTTCCGTAGGTaGTCTTATCCCAGGTGTAGGTCTGGATGGCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: RLWQCTSCHFRR*SYPRCRSGWPE Trigger: CTCTGGCCATCCAGACCTACACCTGGGATAAGACCACCTACGGAAATGGCAAGAAGTACATTGCCACAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR TCA 72 bp | TTAGTGACGGCATCGCTGCTGTGGGAGAAACCCTCATaGTCACCACCACACAGACTGTCAAAATCCTCACAG | + |
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Preference number: 3 (lower is better) Translates to: LVTASLLWEKPS*SPPHRLSKSSQ Trigger: CTGTGAGGATTTTGACAGTCTGTGTGGTGGTGATCATGAGGGTTTCTCCCACAGCAGCGATGCCGTCACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| 3UTR GCA 72 bp | TCTGCACTGTCCTTGGCTGACTCTCTAAGATTCACCTaGTCGGTTCTAAGGCTTGCTTCTTTGGGACCCTAC | + |
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Preference number: 3 (lower is better) Translates to: SALSLADSLRFT*SVLRLASLGPY Trigger: GTAGGGTCCCAAAGAAGCAAGCCTTAGAACCGAGCAGGTGAATCTTAGAGAGTCAGCCAAGGACAGTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| 3UTR CCA 72 bp | GCAGGCTCTATTGGGAAGAAGACACCACGTAGGCTGTaGCAATGTACTTCTTGCCATTTCCGTAGGTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: AGSIGKKTPRRL*QCTSCHFRRWS Trigger: AGACCACCTACGGAAATGGCAAGAAGTACATTGCCACAGCCTACGTGGTGTCTTCTTCCCAATAGAGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
||
| 3UTR TCA 72 bp | TGGGCATTTCTAGATTCGAGATTCCTTTTACAAAACTaGGCTCTGGGATTCCTCCCAGACTCCTCCCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: WAFLDSRFLLQN*ALGFLPDSSLP Trigger: GGGGAGGGAGGAGTCTGGGAGGAATCCCAGAGCTCAGTTTTGTAAAAGGAATCTCGAATCTAGAAATGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 ENSMUST00000230430.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGCTCGGTTCTAAGGCTTGCTTCTTTGGGACCCTACACAAGGCTGAGTCACCAGAGAGACAAAGGTTaGGCTGATTCTCTGCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: TCSVLRLASLGPYTRLSHQRDKG*ADSLHF Trigger: AAAATGCAGAGAATCAGCCAAACCTTTGTCTCTCTG...GTGACTCAGCCTTGTGTAGGGTCCCAAAGAAGCAAGCCTTAGAACCGAGCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| 3UTR GCA 72 bp | AGACATGTTCAAAGCCACTCGAGTCCCCTTCATCATTaGCTCTCGAGTACAGCCCAAACCACATGTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RHVQSHSSPLHH*LSSTAQTTCSS Trigger: TGAAGAACATGTGGTTTGGGCTGTACTCGAGAGGCAATGATGAAGGGGACTCGAGTGGCTTTGAACATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
||
| 3UTR GCA 72 bp | GAAACAAAACTGTGGAATCAAACGCATGTCTGTAACTaGACTGAACATCTGCAAGTGGGAAACTTCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ETKLWNQTHVCN*TEHLQVGNFWK Trigger: CTTCCAGAAGTTTCCCACTTGCAGATGTTCAGTGCAGTTACAGACATGCGTTTGATTCCACAGTTTTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| 3UTR TCA 72 bp | CCACATGTTCTTCAAATCGTCCACAAACTCTTGTTCTaGGCTGTAACGGTTTTGGTGATGGAGAAAGCTATA | + |
|
Preference number: 3 (lower is better) Translates to: PHVLQIVHKLLF*AVTVLVMEKAI Trigger: TATAGCTTTCTCCATCACCAAAACCGTTACAGCTCAGAACAAGAGTTTGTGGACGATTTGAAGAACATGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
||
| 3UTR CCA 72 bp | CTTCTCCCAGCCCAGAATGTTTCAAACTACGGCAGCTaGATAAACATTAATATAGTTGTCAATGACACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLPAQNVSNYGS*ININIVVNDTK Trigger: CTTGGTGTCATTGACAACTATATTAATGTTTATCCAGCTGCCGTAGTTTGAAACATTCTGGGCTGGGAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCTCCCGGCAGCGGCCCTaGCAGGAGCTCGGTGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCSRQRP*QELGAE Trigger: CTCCGCACCGAGCTCCTGCCAGGGCCGCTGCCGGGA...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR CCA 90 bp | CTGCTCGGTTCTAAGGCTTGCTTCTTTGGGACCCTACACAAGGCTGAGTCACAGTCCCGGCAGCGGCCCTaGCAGGAGCTCGGTGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGSKACFFGTLHKAESQSRQRP*QELGAE Trigger: CTCCGCACCGAGCTCCTGCCAGGGCCGCTGCCGGGA...CTGTGACTCAGCCTTGTGTAGGGTCCCAAAGAAGCAAGCCTTAGAACCGAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| 3UTR CAA 72 bp | CTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTaGTCCCTCTGCCCTCAGGACCCCAGCTGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPSKEQIAPGPC*SLCPQDPSWLQ Trigger: CTGCAGCCAGCTGGGGTCCTGAGGGCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 ENSMUST00000230430.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCCTCTGGATCCAGGAATaGCTCTGGCTCTGGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCLWIQE*LWLWGS Trigger: GGACCCCCAGAGCCAGAGGCATTCCTGGATCCAGAG...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCCCCTGCTCCTCCAGTTaGTGGGCACTGAAATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCPCSSS*WALKCS Trigger: GGAGCATTTCAGTGCCCAGCAACTGGAGGAGCAGGG...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCCTGAGGAAGACACCCTaGTCCTCCAGTTGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCLRKTP*SSSCWA Trigger: TGCCCAGCAACTGGAGGAGCAGGGTGTCTTCCTCAG...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCCCACCCAGGCTCAGATaGCACTTTTTGCCTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCPPRLR*HFLPGL Trigger: CAGGCCAGGCAAAAAGTGCCATCTGAGCCTGGGTGG...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCCTCATGACAGCGAGATaGGCACGACTCCAGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCLMTAR*ARLQVS Trigger: GGAAACCTGGAGTCGTGCGCATCTCGCTGTCATGAG...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100249.10 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCATCCAGGAATGCCTCTaGCTCTGGGGGTCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCIQECL*LWGSFF Trigger: GAAGAAGGACCCCCAGAGCCAGAGGCATTCCTGGAT...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCCGGAGTAGAGGTGGCTaGTTGGGATCTTGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCRSRGG*LGSCPL Trigger: CAGAGGACAAGATCCCAACCAGCCACCTCTACTCCG...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCCAGCGGTCATTACAGTaGCAAGGGTGGTGCTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCQRSLQ*QGWCLS Trigger: CGACAAGCACCACCCTTGCCACTGTAATGACCGCTG...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCGAATGCCTCTGGCTCTaGGGGTCCTTCTTCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCECLWL*GSFFSS Trigger: ACTGCTGAAGAAGGACCCCCAGAGCCAGAGGCATTC...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100249.10 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCTGGGAGAAACCCTCATaGTCACCACCACACAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCWEKPS*SPPHRL Trigger: CAGTCTGTGTGGTGGTGATCATGAGGGTTTCTCCCA...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCGGTCCTTCTTCAGCCTaGAGGCAAGCACATGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCGPSSA*RQAHVL Trigger: CAACACATGTGCTTGCCTCCAGGCTGAAGAAGGACC...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCTGGGATCTTGTCCTCTaGATCCAGGAATGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCWDLVL*IQECLW Trigger: CCAGAGGCATTCCTGGATCCAGAGGACAAGATCCCA...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCGTAGAGGTGGCTGGTTaGGATCTTGTCCTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCVEVAG*DLVLWI Trigger: GATCCAGAGGACAAGATCCCAACCAGCCACCTCTAC...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCAAGCGGATCCAGTTATaGAAGCCAGTGACCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCKRIQL*KPVTLP Trigger: AGGCAAGGTCACTGGCTTTCATAACTGGATCCGCTT...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCAGTAGCCATCCCAATTaGACTGCATGGCCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCSSHPN*TAWPGH Trigger: ATGTCCTGGCCATGCAGTTCAATTGGGATGGCTACT...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCCGGTTAAATTTCTCATaGCAGCGAGATGCGCACGAC | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCRLNFS*QRDAHD Trigger: GTCGTGCGCATCTCGCTGTCATGAGAAATTTAACCG...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100249.10 |
||
| CDS-3UTR CCA 90 bp | CCCAAGGAGGGAAAGGGCAGACCCCTCCCCTTCACATTAGAGGGAAGTATGGAGATCCAGGAATGCCTCTaGCTCTGGGGGTCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKEGKGRPLPFTLEGSMEIQECL*LWGSFF Trigger: GAAGAAGGACCCCCAGAGCCAGAGGCATTCCTGGAT...CTCCATACTTCCCTCTAATGTGAAGGGGAGGGGTCTGCCCTTTCCCTCCTTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCATGGCACTTTTTGCCTaGCCTGGTGATGAAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCMALFA*PGDEAQ Trigger: CTGTGCTTCATCACCAGGCCAGGCAAAAAGTGCCAT...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR GCA 90 bp | ACATACCTCCCAACCCGTGACTCTGCACTGTCCTTGGCTGACTCTCTAAGATTCCTCTGGATCCAGGAATaGCTCTGGCTCTGGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TYLPTRDSALSLADSLRFLWIQE*LWLWGS Trigger: GGACCCCCAGAGCCAGAGGCATTCCTGGATCCAGAG...GAATCTTAGAGAGTCAGCCAAGGACAGTGCAGAGTCACGGGTTGGGAGGTATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| CDS-3UTR GCA 90 bp | GTTGAAATTAGAAACCCCGGGGTCCCTCTTCTCCCAGCCCAGAATGTTTCAAACCTGGCAGGAGCTCGGTaGGGAGTAGAGGTGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VEIRNPGVPLLPAQNVSNLAGAR*GVEVAG Trigger: ACCAGCCACCTCTACTCCGCACCGAGCTCCTGCCAG...GTTTGAAACATTCTGGGCTGGGAGAAGAGGGACCCCGGGGTTTCTAATTTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCCCTTCTGGGCTTTGTTaGTATCTACCCTGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCPSGLC*YLPCRW Trigger: CCATCTACAGGGTAGATACCAACAAAGCCCAGAAGG...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR CCA 90 bp | ACCTGCTCGGTTCTAAGGCTTGCTTCTTTGGGACCCTACACAAGGCTGAGTCACCCACCCAGGCTCAGATaGCACTTTTTGCCTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TCSVLRLASLGPYTRLSHPPRLR*HFLPGL Trigger: CAGGCCAGGCAAAAAGTGCCATCTGAGCCTGGGTGG...GTGACTCAGCCTTGTGTAGGGTCCCAAAGAAGCAAGCCTTAGAACCGAGCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| CDS-3UTR TCA 90 bp | CCCAAGGAGGGAAAGGGCAGACCCCTCCCCTTCACATTAGAGGGAAGTATGGAGAAGCGGATCCAGTTATaGAAGCCAGTGACCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PKEGKGRPLPFTLEGSMEKRIQL*KPVTLP Trigger: AGGCAAGGTCACTGGCTTTCATAACTGGATCCGCTT...CTCCATACTTCCCTCTAATGTGAAGGGGAGGGGTCTGCCCTTTCCCTCCTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| CDS-3UTR GCA 90 bp | GGAAGTATGGAGCCAAGGACTTGCTCATGGCTCCCAAACTCGGCAAAGAGATCTCCCTGCTCCTCCAGTTaGTGGGCACTGAAATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSMEPRTCSWLPNSAKRSPCSSS*WALKCS Trigger: GGAGCATTTCAGTGCCCAGCAACTGGAGGAGCAGGG...AGATCTCTTTGCCGAGTTTGGGAGCCATGAGCAAGTCCTTGGCTCCATACTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCTGGCAATGTACTTCTTaGCATTTCCGTAGGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCWQCTS*HFRRWS Trigger: AGACCACCTACGGAAATGGCAAGAAGTACATTGCCA...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR GCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCGTCCTTCTTCAGCAGTaGACAGATGTTCATAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCVLLQQ*TDVHSR Trigger: ACGACTATGAACATCTGTGCACTGCTGAAGAAGGAC...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100249.10 |
||
| 3UTR CAA 72 bp | CCCACATACCTCCCAACCCGTGACTCTGCACTGTCCTaGGCTGACTCTCTAAGATTCACCTGCTCGGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PTYLPTRDSALS*ADSLRFTCSVL Trigger: TAGAACCGAGCAGGTGAATCTTAGAGAGTCAGCCAAGGACAGTGCAGAGTCACGGGTTGGGAGGTATGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTCGGTTCTAAGGCTTGCTTCTTTGGGACCCTACACAAGGCTGAGTCACAGTGGGAGAAACCCTCATaGTCACCACCACACAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGSKACFFGTLHKAESQWEKPS*SPPHRL Trigger: CAGTCTGTGTGGTGGTGATCATGAGGGTTTCTCCCA...CTGTGACTCAGCCTTGTGTAGGGTCCCAAAGAAGCAAGCCTTAGAACCGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCACAATGTCTTCCTTCTaGGCTTTGTTGGTATCTACC | + |
|
Preference number: 4 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCTMSSF*ALLVST Trigger: GGTAGATACCAACAAAGCCCAGAAGGAAGACATTGT...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGACCCCTCCCCTTCACATTAGAGGGAAGTATGGAGCCAAGGACTTGCTCAATGGCACTTTTTGCCTaGCCTGGTGATGAAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GRPLPFTLEGSMEPRTCSMALFA*PGDEAQ Trigger: CTGTGCTTCATCACCAGGCCAGGCAAAAAGTGCCAT...TGAGCAAGTCCTTGGCTCCATACTTCCCTCTAATGTGAAGGGGAGGGGTCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| CDS-3UTR CCA 90 bp | AGGTGGCTGGTTGGGATCTTGTCCTCTGGATCCAGGAATGCCTCTGGCTCTGGGAATTTTCTACCATTCTaGCATTTGGTGCCCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RWLVGILSSGSRNASGSGNFLPF*HLVPTA Trigger: TGCAGTGGGCACCAAATGCCAGAATGGTAGAAAATT...CCCAGAGCCAGAGGCATTCCTGGATCCAGAGGACAAGATCCCAACCAGCCACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
||
| CDS-3UTR TCA 90 bp | ACATACCTCCCAACCCGTGACTCTGCACTGTCCTTGGCTGACTCTCTAAGATTCCAGGAGGCTGAGGACTaGAAAAATGGAAGGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TYLPTRDSALSLADSLRFQEAED*KNGRLS Trigger: GGAAAGCCTTCCATTTTTTCAGTCCTCAGCCTCCTG...GAATCTTAGAGAGTCAGCCAAGGACAGTGCAGAGTCACGGGTTGGGAGGTATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| CDS-3UTR TCA 90 bp | CCCAAGGAGGGAAAGGGCAGACCCCTCCCCTTCACATTAGAGGGAAGTATGGAGAGTTATGAAAGCCAGTaGCCTTGCCTTTCTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PKEGKGRPLPFTLEGSMESYESQ*PCLSSL Trigger: AAGTGAAGAAAGGCAAGGTCACTGGCTTTCATAACT...CTCCATACTTCCCTCTAATGTGAAGGGGAGGGGTCTGCCCTTTCCCTCCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| CDS-3UTR GCA 90 bp | CTAGGCAGAGAGAGCTCTGTTTCCCAGTTCATGTTGCCAAAATACAGAGAGACACTGAGGAAGACACCCTaGTCCTCCAGTTGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGRESSVSQFMLPKYRETLRKTP*SSSCWA Trigger: TGCCCAGCAACTGGAGGAGCAGGGTGTCTTCCTCAG...TGTCTCTCTGTATTTTGGCAACATGAACTGGGAAACAGAGCTCTCTCTGCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
||
| CDS-3UTR TCA 90 bp | CTCCTGCAGGTAGAAGCGGATCCAGTTATGAAAGCCAGTGACCTTGCCTTTCTTCAGGAGGCTGAGGACTaGAAAAATGGAAGGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLQVEADPVMKASDLAFLQEAED*KNGRLS Trigger: GGAAAGCCTTCCATTTTTTCAGTCCTCAGCCTCCTG...AAGAAAGGCAAGGTCACTGGCTTTCATAACTGGATCCGCTTCTACCTGCAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| CDS-3UTR TCA 90 bp | ATTAGAGGGAAGTATGGAGCCAAGGACTTGCTCATGGCTCCCAAACTCGGCAAAAGTAGCCATCCCAATTaGACTGCATGGCCAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: IRGKYGAKDLLMAPKLGKSSHPN*TAWPGH Trigger: ATGTCCTGGCCATGCAGTTCAATTGGGATGGCTACT...TTTGCCGAGTTTGGGAGCCATGAGCAAGTCCTTGGCTCCATACTTCCCTCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS-3UTR GCA 90 bp | ACATACCTCCCAACCCGTGACTCTGCACTGTCCTTGGCTGACTCTCTAAGATTCCATTCTGGCATTTGGTaGCCACTGCACCCAAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: TYLPTRDSALSLADSLRFHSGIW*PLHPKD Trigger: ATCTTTTGGGTGCAGTGGGCACCAAATGCCAGAATG...GAATCTTAGAGAGTCAGCCAAGGACAGTGCAGAGTCACGGGTTGGGAGGTATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| 3UTR CAA 72 bp | TCTGCAAGTGGGAAACTTCTGGAAGCAGATGCTGAGTaGGCCACACAGACGTTTAGGACTGAGGAAACCACA | + |
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Preference number: 4 (lower is better) Translates to: SASGKLLEADAE*ATQTFRTEETT Trigger: TGTGGTTTCCTCAGTCCTAAACGTCTGTGTGGCCAACTCAGCATCTGCTTCCAGAAGTTTCCCACTTGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS-3UTR GCA 90 bp | TGCTGTGGGAGAAACCCTCATGATCACCACCACACAGACTGTCAAAATCCTCACCATTCTGGCATTTGGTaGCCACTGCACCCAAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: CCGRNPHDHHHTDCQNPHHSGIW*PLHPKD Trigger: ATCTTTTGGGTGCAGTGGGCACCAAATGCCAGAATG...GTGAGGATTTTGACAGTCTGTGTGGTGGTGATCATGAGGGTTTCTCCCACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| CDS-3UTR CCA 90 bp | CTAGGCAGAGAGAGCTCTGTTTCCCAGTTCATGTTGCCAAAATACAGAGAGACAGTAGAGGTGGCTGGTTaGGATCTTGTCCTCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: LGRESSVSQFMLPKYRETVEVAG*DLVLWI Trigger: GATCCAGAGGACAAGATCCCAACCAGCCACCTCTAC...TGTCTCTCTGTATTTTGGCAACATGAACTGGGAAACAGAGCTCTCTCTGCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS-3UTR CCA 90 bp | ATTAGAGGGAAGTATGGAGCCAAGGACTTGCTCATGGCTCCCAAACTCGGCAAACCTTCTGGGCTTTGTTaGTATCTACCCTGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: IRGKYGAKDLLMAPKLGKPSGLC*YLPCRW Trigger: CCATCTACAGGGTAGATACCAACAAAGCCCAGAAGG...TTTGCCGAGTTTGGGAGCCATGAGCAAGTCCTTGGCTCCATACTTCCCTCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS-3UTR CCA 90 bp | GGAAGTATGGAGCCAAGGACTTGCTCATGGCTCCCAAACTCGGCAAAGAGATCTAATTTTCTACCATTCTaGCATTTGGTGCCCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSMEPRTCSWLPNSAKRSNFLPF*HLVPTA Trigger: TGCAGTGGGCACCAAATGCCAGAATGGTAGAAAATT...AGATCTCTTTGCCGAGTTTGGGAGCCATGAGCAAGTCCTTGGCTCCATACTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS-3UTR CCA 90 bp | TCTGTTTCCCAGTTCATGTTGCCAAAATACAGAGAGACAAAGGTTTGGCTGATTCGGAGTAGAGGTGGCTaGTTGGGATCTTGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSQFMLPKYRETKVWLIRSRGG*LGSCPL Trigger: CAGAGGACAAGATCCCAACCAGCCACCTCTACTCCG...AATCAGCCAAACCTTTGTCTCTCTGTATTTTGGCAACATGAACTGGGAAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS-3UTR CCA 90 bp | TCTGTTTCCCAGTTCATGTTGCCAAAATACAGAGAGACAAAGGTTTGGCTGATTTGGGATCTTGTCCTCTaGATCCAGGAATGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSQFMLPKYRETKVWLIWDLVL*IQECLW Trigger: CCAGAGGCATTCCTGGATCCAGAGGACAAGATCCCA...AATCAGCCAAACCTTTGTCTCTCTGTATTTTGGCAACATGAACTGGGAAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS-3UTR CCA 90 bp | GAAATGAAACAAAACTGTGGAATCAAACGCATGTCTGTAACTGCACTGAACATCCAGCGGTCATTACAGTaGCAAGGGTGGTGCTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: EMKQNCGIKRMSVTALNIQRSLQ*QGWCLS Trigger: CGACAAGCACCACCCTTGCCACTGTAATGACCGCTG...GATGTTCAGTGCAGTTACAGACATGCGTTTGATTCCACAGTTTTGTTTCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS-3UTR GCA 90 bp | TCTGTTTCCCAGTTCATGTTGCCAAAATACAGAGAGACAAAGGTTTGGCTGATTTGGCAATGTACTTCTTaGCATTTCCGTAGGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVSQFMLPKYRETKVWLIWQCTS*HFRRWS Trigger: AGACCACCTACGGAAATGGCAAGAAGTACATTGCCA...AATCAGCCAAACCTTTGTCTCTCTGTATTTTGGCAACATGAACTGGGAAACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS-3UTR CCA 90 bp | TTTGAAATGAAACAAAACTGTGGAATCAAACGCATGTCTGTAACTGCACTGAACACAATGTCTTCCTTCTaGGCTTTGTTGGTATCTACC | + |
|
Preference number: 4 (lower is better) Translates to: FEMKQNCGIKRMSVTALNTMSSF*ALLVST Trigger: GGTAGATACCAACAAAGCCCAGAAGGAAGACATTGT...GTTCAGTGCAGTTACAGACATGCGTTTGATTCCACAGTTTTGTTTCATTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS GCA 90 bp | GGAGTAGAGGTGGCTGGTTGGGATCTTGTCCTCTGGATCCAGGAATaGCTCTGGCTCTGGGGGTCCTTCTTCAGCCTGGAGGCAAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: GVEVAGWDLVLWIQE*LWLWGSFFSLEAST Trigger: TGTGCTTGCCTCCAGGCTGAAGAAGGACCCCCAGAGCCAGAGGCATTCCTGGATCCAGAGGACAAGATCCCAACCAGCCACCTCTACTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS CCA 90 bp | GAGGTGGCTGGTTGGGATCTTGTCCTCTGGATCCAGGAATGCCTCTaGCTCTGGGGGTCCTTCTTCAGCCTGGAGGCAAGCACATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EVAGWDLVLWIQECL*LWGSFFSLEASTCV Trigger: AACACATGTGCTTGCCTCCAGGCTGAAGAAGGACCCCCAGAGCCAGAGGCATTCCTGGATCCAGAGGACAAGATCCCAACCAGCCACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS-3UTR CAA 90 bp | CCTCCCCTCCCCAGTAAGGAGCAAATAGCACCAGGACCCTGCTTGTCCCTCTGCCTCAGATGGCACTTTTaGCCTGGCCTGGTGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PPLPSKEQIAPGPCLSLCLRWHF*PGLVMK Trigger: CTTCATCACCAGGCCAGGCAAAAAGTGCCATCTGAG...GCAGAGGGACAAGCAGGGTCCTGGTGCTATTTGCTCCTTACTGGGGAGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023105.5 ENSMUST00000100249.10 |
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| CDS TCA 90 bp | CTGGCTCTGGGGGTCCTTCTTCAGCCTGGAGGCAAGCACATGTGTTaGAAGGGTATTCGCACATCCCATCCCAGCCCCCAATCTGACACA | + |
|
Preference number: 5 (lower is better) Translates to: LALGVLLQPGGKHMC*KGIRTSHPSPQSDT Trigger: TGTGTCAGATTGGGGGCTGGGATGGGATGTGCGAATACCCTTTCAACACATGTGCTTGCCTCCAGGCTGAAGAAGGACCCCCAGAGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS CCA 90 bp | GCTGGTTGGGATCTTGTCCTCTGGATCCAGGAATGCCTCTGGCTCTaGGGGTCCTTCTTCAGCCTGGAGGCAAGCACATGTGTTGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGWDLVLWIQECLWL*GSFFSLEASTCVER Trigger: CCTTTCAACACATGTGCTTGCCTCCAGGCTGAAGAAGGACCCCCAGAGCCAGAGGCATTCCTGGATCCAGAGGACAAGATCCCAACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS-3UTR CAA 90 bp | TCCCTCTGCCCTCAGGACCCCAGCTGGCTGCAGGCTCTATTGGGAAGAAGACACGGAGCCCCTTCTGGATaGAAAACCAACTTGAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLCPQDPSWLQALLGRRHGAPSG*KTNLSC Trigger: GCAACTCAAGTTGGTTTTCAATCCAGAAGGGGCTCC...GTGTCTTCTTCCCAATAGAGCCTGCAGCCAGCTGGGGTCCTGAGGGCAGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| CDS GCA 90 bp | CTGGATCCAGGAATGCCTCTGGCTCTGGGGGTCCTTCTTCAGCAGTaGACAGATGTTCATAGTCGTCACAGCAGTCATCATGCTGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LDPGMPLALGVLLQQ*TDVHSRHSSHHAGD Trigger: GTCCCCAGCATGATGACTGCTGTGACGACTATGAACATCTGTGCACTGCTGAAGAAGGACCCCCAGAGCCAGAGGCATTCCTGGATCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100249.10 |
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| CDS CCA 90 bp | GAGGTGGCTGGTTGGGATCTTGTCCTCTGGATCCAGGAATGCCTCTaGCTCTGGGGGTCCTTCTTCAGCAGTGCACAGATGTTCATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: EVAGWDLVLWIQECL*LWGSFFSSAQMFIV Trigger: GACTATGAACATCTGTGCACTGCTGAAGAAGGACCCCCAGAGCCAGAGGCATTCCTGGATCCAGAGGACAAGATCCCAACCAGCCACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100249.10 |
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| CDS CCA 90 bp | GCTGGTTGGGATCTTGTCCTCTGGATCCAGGAATGCCTCTGGCTCTaGGGGTCCTTCTTCAGCAGTGCACAGATGTTCATAGTCGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: AGWDLVLWIQECLWL*GSFFSSAQMFIVVT Trigger: TGTGACGACTATGAACATCTGTGCACTGCTGAAGAAGGACCCCCAGAGCCAGAGGCATTCCTGGATCCAGAGGACAAGATCCCAACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100249.10 |
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| CDS-3UTR CAA 90 bp | GGAAGTATGGAGCCAAGGACTTGCTCATGGCTCCCAAACTCGGCAAAGAGATCTCTACCATTCTGGCATTaGGTGCCCACTGCACCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GSMEPRTCSWLPNSAKRSLPFWH*VPTAPK Trigger: TTTGGGTGCAGTGGGCACCAAATGCCAGAATGGTAG...AGATCTCTTTGCCGAGTTTGGGAGCCATGAGCAAGTCCTTGGCTCCATACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS-3UTR CAA 90 bp | ACATACCTCCCAACCCGTGACTCTGCACTGTCCTTGGCTGACTCTCTAAGATTCGGAGCCCCTTCTGGATaGAAAACCAACTTGAGTTGC | + |
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Preference number: 5 (lower is better) Translates to: TYLPTRDSALSLADSLRFGAPSG*KTNLSC Trigger: GCAACTCAAGTTGGTTTTCAATCCAGAAGGGGCTCC...GAATCTTAGAGAGTCAGCCAAGGACAGTGCAGAGTCACGGGTTGGGAGGTATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS-3UTR CAA 90 bp | AAGACACCACGTAGGCTGTGGCAATGTACTTCTTGCCATTTCCGTAGGTGGTCTCTACCATTCTGGCATTaGGTGCCCACTGCACCCAAA | + |
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Preference number: 5 (lower is better) Translates to: KTPRRLWQCTSCHFRRWSLPFWH*VPTAPK Trigger: TTTGGGTGCAGTGGGCACCAAATGCCAGAATGGTAG...AGACCACCTACGGAAATGGCAAGAAGTACATTGCCACAGCCTACGTGGTGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| CDS-3UTR CAA 90 bp | ATTAGAGGGAAGTATGGAGCCAAGGACTTGCTCATGGCTCCCAAACTCGGCAAAAGTAGAGGTGGCTGGTaGGGATCTTGTCCTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: IRGKYGAKDLLMAPKLGKSRGGW*GSCPLD Trigger: ATCCAGAGGACAAGATCCCAACCAGCCACCTCTACT...TTTGCCGAGTTTGGGAGCCATGAGCAAGTCCTTGGCTCCATACTTCCCTCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS-3UTR CAA 90 bp | GTTGAAATTAGAAACCCCGGGGTCCCTCTTCTCCCAGCCCAGAATGTTTCAAACCTCAGATGGCACTTTTaGCCTGGCCTGGTGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VEIRNPGVPLLPAQNVSNLRWHF*PGLVMK Trigger: CTTCATCACCAGGCCAGGCAAAAAGTGCCATCTGAG...GTTTGAAACATTCTGGGCTGGGAGAAGAGGGACCCCGGGGTTTCTAATTTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS CCA 72 bp | GGTTGGGATCTTGTCCTCTGGATCCAGGAATGCCTCTaGCTCTGGGGGTCCTTCTTCAGCCTGGAGGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: GWDLVLWIQECL*LWGSFFSLEAS Trigger: GCTTGCCTCCAGGCTGAAGAAGGACCCCCAGAGCCAGAGGCATTCCTGGATCCAGAGGACAAGATCCCAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS CAA 72 bp | GGGGGTCCTTCTTCAGCCTGGAGGCAAGCACATGTGTaGAAAGGGTATTCGCACATCCCATCCCAGCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GGPSSAWRQAHV*KGYSHIPSQPP Trigger: TGGGGGCTGGGATGGGATGTGCGAATACCCTTTCAACACATGTGCTTGCCTCCAGGCTGAAGAAGGACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS CAA 72 bp | GTGCTGGGCTTCCTACCCTGGAGGCAAGCACATGTGTaGAAAGGGTATTCGCACATCCCATCCCAGCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLGFLPWRQAHV*KGYSHIPSQPP Trigger: TGGGGGCTGGGATGGGATGTGCGAATACCCTTTCAACACATGTGCTTGCCTCCAGGGTAGGAAGCCCAGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| CDS TCA 72 bp | GGGGTCCTTCTTCAGCCTGGAGGCAAGCACATGTGTTaGAAGGGTATTCGCACATCCCATCCCAGCCCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GVLLQPGGKHMC*KGIRTSHPSPQ Trigger: TTGGGGGCTGGGATGGGATGTGCGAATACCCTTTCAACACATGTGCTTGCCTCCAGGCTGAAGAAGGACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023105.5 |
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| CDS TCA 72 bp | TGCTGGGCTTCCTACCCTGGAGGCAAGCACATGTGTTaGAAGGGTATTCGCACATCCCATCCCAGCCCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: CWASYPGGKHMC*KGIRTSHPSPQ Trigger: TTGGGGGCTGGGATGGGATGTGCGAATACCCTTTCAACACATGTGCTTGCCTCCAGGGTAGGAAGCCCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230430.2 |
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| CDS CCA 72 bp | GGTTGGGATCTTGTCCTCTGGATCCAGGAATGCCTCTaGCTCTGGGGGTCCTTCTTCAGCAGTGCACAGATG | + |
|
Preference number: 6 (lower is better) Translates to: GWDLVLWIQECL*LWGSFFSSAQM Trigger: CATCTGTGCACTGCTGAAGAAGGACCCCCAGAGCCAGAGGCATTCCTGGATCCAGAGGACAAGATCCCAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100249.10 |
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| CDS TCA 72 bp | TCACACTGGCAGACAGCATCCCGGTTAAATTTCTCATaGCAGCGAGATGCGCACGACTCCAGGTTTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SHWQTASRLNFS*QRDAHDSRFPA Trigger: GGCTGGAAACCTGGAGTCGTGCGCATCTCGCTGTCATGAGAAATTTAACCGGGATGCTGTCTGCCAGTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100249.10 |
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| CDS GCA 72 bp | GGAATGCCTCTGGCTCTGGGGGTCCTTCTTCAGCAGTaGACAGATGTTCATAGTCGTCACAGCAGTCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: GMPLALGVLLQQ*TDVHSRHSSHH Trigger: ATGATGACTGCTGTGACGACTATGAACATCTGTGCACTGCTGAAGAAGGACCCCCAGAGCCAGAGGCATTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100249.10 |
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| CDS CCA 72 bp | GATCTTGTCCTCTGGATCCAGGAATGCCTCTGGCTCTaGGGGTCCTTCTTCAGCAGTGCACAGATGTTCATA | + |
|
Preference number: 6 (lower is better) Translates to: DLVLWIQECLWL*GSFFSSAQMFI Trigger: TATGAACATCTGTGCACTGCTGAAGAAGGACCCCCAGAGCCAGAGGCATTCCTGGATCCAGAGGACAAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100249.10 |
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