Pregenerated sensors for ENDOD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037419Ensembl transcript IDs: ENSMUST00000167549.2, ENSMUST00000214236.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAACCAAGCTCTGGAGACCTAGGCAAAGGTCAGAGCCCCAGCAGATaGTACCACCGAGAGGGAGAAATTTCAGCAGAGCAGTCACCGGCT | + |
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Preference number: 1 (lower is better) Translates to: QPSSGDLGKGQSPSR*YHREGEISAEQSPA Trigger: AGCCGGTGACTGCTCTGCTGAAATTTCTCCCTCTCGGTGGTAGCATCTGCTGGGGCTCTGACCTTTGCCTAGGTCTCCAGAGCTTGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR GCA 90 bp | AAGTTGACCCAAACCTCCCTAGGCATGCCTGTGGACACACAGCACTaGTTCATGCTGCTTCCTCTACACCTGGAGGGACCAGCTCTACTC | + |
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Preference number: 1 (lower is better) Translates to: KLTQTSLGMPVDTQH*FMLLPLHLEGPALL Trigger: GAGTAGAGCTGGTCCCTCCAGGTGTAGAGGAAGCAGCATGAAGCAGTGCTGTGTGTCCACAGGCATGCCTAGGGAGGTTTGGGTCAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR GCA 90 bp | TCATGGCCGCAAGGAAGCTTGCTCGCTGCTGCTAGTCCTCTCTGGTaGTATTCGAATCTTTTCCTGCAGCATTTAATTCCGGCTCCACAC | + |
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Preference number: 1 (lower is better) Translates to: SWPQGSLLAAASPLW*YSNLFLQHLIPAPH Trigger: GTGTGGAGCCGGAATTAAATGCTGCAGGAAAAGATTCGAATAGCACCAGAGAGGACTAGCAGCAGCGAGCAAGCTTCCTTGCGGCCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR CCA 90 bp | TGCCTGTGGACACACAGCACTGCTTCATGCTGCTTCCTCTACACCTaGAGGGACCAGCTCTACTCCAACTGGGGCTGCATTCAATTTTTA | + |
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Preference number: 1 (lower is better) Translates to: CLWTHSTASCCFLYT*RDQLYSNWGCIQFL Trigger: TAAAAATTGAATGCAGCCCCAGTTGGAGTAGAGCTGGTCCCTCCAGGTGTAGAGGAAGCAGCATGAAGCAGTGCTGTGTGTCCACAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR TCA 90 bp | GGGGAAGGGGGCTTCGCTGAGATGCAGTCAGCACAATGTCTCCTGTaGATACCTGGCATTTCGTTAACCATGCCACATCCAGTTGATACA | + |
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Preference number: 1 (lower is better) Translates to: GEGGFAEMQSAQCLL*IPGISLTMPHPVDT Trigger: TGTATCAACTGGATGTGGCATGGTTAACGAAATGCCAGGTATTCACAGGAGACATTGTGCTGACTGCATCTCAGCGAAGCCCCCTTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR CCA 90 bp | CTTTTCCTGCAGCATTTAATTCCGGCTCCACACACATTCGTTCCCTaGGAACAGCTGGTGTTCTGCCCCCTCTGTGGTTTCTTTCTAGAC | + |
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Preference number: 1 (lower is better) Translates to: LFLQHLIPAPHTFVP*EQLVFCPLCGFFLD Trigger: GTCTAGAAAGAAACCACAGAGGGGGCAGAACACCAGCTGTTCCCAGGGAACGAATGTGTGTGGAGCCGGAATTAAATGCTGCAGGAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR GCA 90 bp | ATTCCGGCTCCACACACATTCGTTCCCTGGGAACAGCTGGTGTTCTaGCCCCTCTGTGGTTTCTTTCTAGACTCCAAGTCTTTACAACTA | + |
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Preference number: 1 (lower is better) Translates to: IPAPHTFVPWEQLVF*PLCGFFLDSKSLQL Trigger: TAGTTGTAAAGACTTGGAGTCTAGAAAGAAACCACAGAGGGGGCAGAACACCAGCTGTTCCCAGGGAACGAATGTGTGTGGAGCCGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR TCA 90 bp | CAAATGACAAAGTTGGCCAACGTCCCCAAGGGCCTGAGAAGAGAATaGAGCCACAGCAAAAACTCCAAGCTGAAGACAGGGTTCAACTTC | + |
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Preference number: 1 (lower is better) Translates to: QMTKLANVPKGLRRE*SHSKNSKLKTGFNF Trigger: GAAGTTGAACCCTGTCTTCAGCTTGGAGTTTTTGCTGTGGCTTCATTCTCTTCTCAGGCCCTTGGGGACGTTGGCCAACTTTGTCATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR GCA 90 bp | CTTATAGATGGAGCACTTTCCACCTCTGCAACCTTGATGACCGAATaGATGTTGCTAGGTAAATGGATGAAGAAGAGCAGAGGGAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: LIDGALSTSATLMTE*MLLGKWMKKSRGSF Trigger: GAAGCTCCCTCTGCTCTTCTTCATCCATTTACCTAGCAACATGCATTCGGTCATCAAGGTTGCAGAGGTGGAAAGTGCTCCATCTATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR CCA 90 bp | ACACACATTCGTTCCCTGGGAACAGCTGGTGTTCTGCCCCCTCTGTaGTTTCTTTCTAGACTCCAAGTCTTTACAACTAATTTCCAGACA | + |
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Preference number: 1 (lower is better) Translates to: THIRSLGTAGVLPPL*FLSRLQVFTTNFQT Trigger: TGTCTGGAAATTAGTTGTAAAGACTTGGAGTCTAGAAAGAAACCACAGAGGGGGCAGAACACCAGCTGTTCCCAGGGAACGAATGTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR TCA 90 bp | GGTCAACATGGTTTTGTCTCACGCTCATTAAAGTGTTCATCTTCCTaGTCTTGCAGGTTTTCTTCCTGTGCTGCAGGAAACGGGTCAAAT | + |
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Preference number: 1 (lower is better) Translates to: GQHGFVSRSLKCSSS*SCRFSSCAAGNGSN Trigger: ATTTGACCCGTTTCCTGCAGCACAGGAAGAAAACCTGCAAGATCAGGAAGATGAACACTTTAATGAGCGTGAGACAAAACCATGTTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR GCA 90 bp | ATCCTCTTCTTCCTTATTTATAATTTTCATAAGAAGCCTGGGTCATaGCAGGTGTTTCCCTCTGAGTCGGAGCGCAGTCCTAAAGTTAGC | + |
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Preference number: 1 (lower is better) Translates to: ILFFLIYNFHKKPGS*QVFPSESERSPKVS Trigger: GCTAACTTTAGGACTGCGCTCCGACTCAGAGGGAAACACCTGGCATGACCCAGGCTTCTTATGAAAATTATAAATAAGGAAGAAGAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR GCA 90 bp | GAGTGTTTCCAAATGATTCCTTATAAGGGGTTTGTGCACAATGAGTaGCCTCCTAGGGCCTCTCAGAATGCAAATTATTCACTGAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: ECFQMIPYKGFVHNE*PPRASQNANYSLKG Trigger: CCCTTTCAGTGAATAATTTGCATTCTGAGAGGCCCTAGGAGGGCACTCATTGTGCACAAACCCCTTATAAGGAATCATTTGGAAACACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR GCA 90 bp | ATTAAAGTGTTCATCTTCCTGATCTTGCAGGTTTTCTTCCTGTGCTaGAGGAAACGGGTCAAATACTCTCCGTGTGGTGCTTGCTATGAT | + |
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Preference number: 1 (lower is better) Translates to: IKVFIFLILQVFFLC*RKRVKYSPCGACYD Trigger: ATCATAGCAAGCACCACACGGAGAGTATTTGACCCGTTTCCTGCAGCACAGGAAGAAAACCTGCAAGATCAGGAAGATGAACACTTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR CCA 90 bp | TCATGCTGCTTCCTCTACACCTGGAGGGACCAGCTCTACTCCAACTaGGGCTGCATTCAATTTTTATTGTGTTATATTTGGCATAAAATG | + |
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Preference number: 1 (lower is better) Translates to: SCCFLYTWRDQLYSN*GCIQFLLCYIWHKM Trigger: CATTTTATGCCAAATATAACACAATAAAAATTGAATGCAGCCCCAGTTGGAGTAGAGCTGGTCCCTCCAGGTGTAGAGGAAGCAGCATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR CCA 90 bp | AAGTTAAGTGAACACTTGGCCCCTCTCTCCTTCATAGCAACTCTTTaGAATGCTAAGAAGAAGATACTAGAAAATCCATTCTCACCATGG | + |
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Preference number: 1 (lower is better) Translates to: KLSEHLAPLSFIATL*NAKKKILENPFSPW Trigger: CCATGGTGAGAATGGATTTTCTAGTATCTTCTTCTTAGCATTCCAAAGAGTTGCTATGAAGGAGAGAGGGGCCAAGTGTTCACTTAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCTCGTCTGCTGTCCCGACCAGTGGCTGTCATGGCCGCAAGGAAGCTTGCTCCGTCCCCAAGTTAAGTaGACACTTGGCCCCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GLVCCPDQWLSWPQGSLLRPQVK*TLGPSL Trigger: GAGAGAGGGGCCAAGTGTTCACTTAACTTGGGGACG...GAGCAAGCTTCCTTGCGGCCATGACAGCCACTGGTCGGGACAGCAGACGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR-3UTR GCA 90 bp | CACACACATTCGTTCCCTGGGAACAGCTGGTGTTCTGCCCCCTCTGTGGTTTCTAGCACTGCTTCATGCTaGTTCCTCTACACCTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: HTHSFPGNSWCSAPSVVSSTASC*FLYTWR Trigger: CCTCCAGGTGTAGAGGAAGCAGCATGAAGCAGTGCT...AGAAACCACAGAGGGGGCAGAACACCAGCTGTTCCCAGGGAACGAATGTGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTATAGATGGAGCACTTTCCACCTCTGCAACCTTGATGACCGAATGCATGTTAGGGTGTGCATCACCTaGGCAAGGGCTCGTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PYRWSTFHLCNLDDRMHVRVCIT*ARARLL Trigger: CAGCAGACGAGCCCTTGCTCAGGTGATGCACACCCT...AACATGCATTCGGTCATCAAGGTTGCAGAGGTGGAAAGTGCTCCATCTATAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTATAGATGGAGCACTTTCCACCTCTGCAACCTTGATGACCGAATGCATGTTGGAAGGGGGCTTCGCTaGGATGCAGTCAGCACAATG | + |
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Preference number: 2 (lower is better) Translates to: PYRWSTFHLCNLDDRMHVGRGLR*DAVSTM Trigger: CATTGTGCTGACTGCATCTCAGCGAAGCCCCCTTCC...AACATGCATTCGGTCATCAAGGTTGCAGAGGTGGAAAGTGCTCCATCTATAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR CAA 90 bp | GATGGAGCACTTTCCACCTCTGCAACCTTGATGACCGAATGCATGTaGCTAGGTAAATGGATGAAGAAGAGCAGAGGGAGCTTCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: DGALSTSATLMTECM*LGKWMKKSRGSFLG Trigger: CCCAAGGAAGCTCCCTCTGCTCTTCTTCATCCATTTACCTAGCAACATGCATTCGGTCATCAAGGTTGCAGAGGTGGAAAGTGCTCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAACTCCAAGCTGAAGACAGGGTTCAACTTCCTAAACCTCCATGTCAGAAGCCATGGAGCACGGCATTaGGCCTGCCCTGAACATTTC | + |
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Preference number: 2 (lower is better) Translates to: KNSKLKTGFNFLNLHVRSHGARH*ACPEHF Trigger: GAAATGTTCAGGGCAGGCTCAATGCCGTGCTCCATG...GCTTCTGACATGGAGGTTTAGGAAGTTGAACCCTGTCTTCAGCTTGGAGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR-3UTR GCA 90 bp | TTCGTTCCCTGGGAACAGCTGGTGTTCTGCCCCCTCTGTGGTTTCTTTCTAGACCGTGCCATACTCTTTTaGAGAAAAATACACACCTGC | + |
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Preference number: 2 (lower is better) Translates to: FVPWEQLVFCPLCGFFLDRAILF*RKIHTC Trigger: GCAGGTGTGTATTTTTCTGCAAAAGAGTATGGCACG...GTCTAGAAAGAAACCACAGAGGGGGCAGAACACCAGCTGTTCCCAGGGAACGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR-3UTR CCA 90 bp | TTCGTTCCCTGGGAACAGCTGGTGTTCTGCCCCCTCTGTGGTTTCTTTCTAGACCAGCTCTACTCCAACTaGGGCTGCATTCAATTTTTA | + |
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Preference number: 2 (lower is better) Translates to: FVPWEQLVFCPLCGFFLDQLYSN*GCIQFL Trigger: TAAAAATTGAATGCAGCCCCAGTTGGAGTAGAGCTG...GTCTAGAAAGAAACCACAGAGGGGGCAGAACACCAGCTGTTCCCAGGGAACGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR-3UTR TCA 90 bp | GCAACCTTGATGACCGAATGCATGTTGCTAGGTAAATGGATGAAGAAGAGCAGAGCCTCACCCTCCCATTaGCAGAGGAAAGTCATAAAG | + |
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Preference number: 2 (lower is better) Translates to: ATLMTECMLLGKWMKKSRASPSH*QRKVIK Trigger: CTTTATGACTTTCCTCTGTCAATGGGAGGGTGAGGC...TCTGCTCTTCTTCATCCATTTACCTAGCAACATGCATTCGGTCATCAAGGTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCCTCTGTGGTTTCTTTCTAGACTCCAAGTCTTTACAACTAATTTCCAGACAAAGAAGCCTGGGTCATaGCAGGTGTTTCCCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: PPLWFLSRLQVFTTNFQTKKPGS*QVFPSE Trigger: CTCAGAGGGAAACACCTGGCATGACCCAGGCTTCTT...TGTCTGGAAATTAGTTGTAAAGACTTGGAGTCTAGAAAGAAACCACAGAGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR-3UTR GCA 90 bp | GCTAGAAAAGCAGCTCCACAAATGACAAAGTTGGCCAACGTCCCCAAGGGCCTGTACTCCAACTGGGGCTaGATTCAATTTTTATTGTGT | + |
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Preference number: 2 (lower is better) Translates to: ARKAAPQMTKLANVPKGLYSNWG*IQFLLC Trigger: ACACAATAAAAATTGAATGCAGCCCCAGTTGGAGTA...CAGGCCCTTGGGGACGTTGGCCAACTTTGTCATTTGTGGAGCTGCTTTTCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR CAA 90 bp | GGACAACAATACTCAGACCTAGTTTGCCTTAACTCTCCAAGAGTATaGGGAGACACGAGATACCGTTTCTTTCAGCATTTAATGTCATCC | + |
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Preference number: 2 (lower is better) Translates to: GQQYSDLVCLNSPRV*GDTRYRFFQHLMSS Trigger: GGATGACATTAAATGCTGAAAGAAACGGTATCTCGTGTCTCCCAATACTCTTGGAGAGTTAAGGCAAACTAGGTCTGAGTATTGTTGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGGCCATCAGCCCAGAGATCTGGAAGGACTTTAAAAACAAATACAGCTAGTTGGAGTGTTTCCAAATaGTTCCTTATAAGGGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: DGPSAQRSGRTLKTNTASWSVSK*FLIRGL Trigger: CAAACCCCTTATAAGGAATCATTTGGAAACACTCCA...ACTAGCTGTATTTGTTTTTAAAGTCCTTCCAGATCTCTGGGCTGATGGCCCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAACTCCAAGCTGAAGACAGGGTTCAACTTCCTAAACCTCCATGTCAGAAGCAGAAAAATACACACCTaGTGGGTAAACATAACACAG | + |
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Preference number: 2 (lower is better) Translates to: KNSKLKTGFNFLNLHVRSRKIHT*WVNITQ Trigger: CTGTGTTATGTTTACCCAGCAGGTGTGTATTTTTCT...GCTTCTGACATGGAGGTTTAGGAAGTTGAACCCTGTCTTCAGCTTGGAGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR GCA 72 bp | TACAGCCTCCTTGTGCCTCTGCGTGGGACTCATCAGTaGCAGGGCAAGCCTCACCCTCCCATTGACAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: YSLLVPLRGTHQ*QGKPHPPIDRG Trigger: TCCTCTGTCAATGGGAGGGTGAGGCTTGCCCTGGCACTGATGAGTCCCACGCAGAGGCACAAGGAGGCTGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR CCA 72 bp | GCTTCCTTGGGCTTCCTTCCATTCCCTAGTTTGCGCTaGGTGGAAAAGGCACTAAGGGAGAGCGGCGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: ASLGFLPFPSLR*VEKALRESGVS Trigger: AGACACGCCGCTCTCCCTTAGTGCCTTTTCCACCCAGCGCAAACTAGGGAATGGAAGGAAGCCCAAGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR GCA 72 bp | TCTGGAGACCTAGGCAAAGGTCAGAGCCCCAGCAGATaGTACCACCGAGAGGGAGAAATTTCAGCAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SGDLGKGQSPSR*YHREGEISAEQ Trigger: CTGCTCTGCTGAAATTTCTCCCTCTCGGTGGTAGCATCTGCTGGGGCTCTGACCTTTGCCTAGGTCTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR GCA 72 bp | GGTGTCCTAGCTCACCATGACTGGCTTCCATTAGCCTaGGAGCAAGGTCAATACAGCCTCCTTGTGCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: GVLAHHDWLPLA*EQGQYSLLVPL Trigger: CAGAGGCACAAGGAGGCTGTATTGACCTTGCTCGCAGGCTAATGGAAGCCAGTCATGGTGAGCTAGGACACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR CCA 72 bp | ACACACAGCACTGCTTCATGCTGCTTCCTCTACACCTaGAGGGACCAGCTCTACTCCAACTGGGGCTGCATT | + |
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Preference number: 3 (lower is better) Translates to: THSTASCCFLYT*RDQLYSNWGCI Trigger: AATGCAGCCCCAGTTGGAGTAGAGCTGGTCCCTCCAGGTGTAGAGGAAGCAGCATGAAGCAGTGCTGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR GCA 72 bp | CCACACACATTCGTTCCCTGGGAACAGCTGGTGTTCTaGCCCCTCTGTGGTTTCTTTCTAGACTCCAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: PHTFVPWEQLVF*PLCGFFLDSKS Trigger: AGACTTGGAGTCTAGAAAGAAACCACAGAGGGGGCAGAACACCAGCTGTTCCCAGGGAACGAATGTGTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR-3UTR CAA 90 bp | GACCTAGGCAAAGGTCAGAGCCCCAGCAGATGCTACCACCGAGAGGGAGAAATTGCGTGCCATACTCTTTaGCAGAAAAATACACACCTG | + |
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Preference number: 3 (lower is better) Translates to: DLGKGQSPSRCYHREGEIACHTL*QKNTHL Trigger: CAGGTGTGTATTTTTCTGCAAAAGAGTATGGCACGC...AATTTCTCCCTCTCGGTGGTAGCATCTGCTGGGGCTCTGACCTTTGCCTAGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR TCA 72 bp | TTTCCAGACAACCATGGGCCACGTCCCCAAGTTAAGTaGACACTTGGCCCCTCTCTCCTTCATAGCAACTCT | + |
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Preference number: 3 (lower is better) Translates to: FPDNHGPRPQVK*TLGPSLLHSNS Trigger: AGAGTTGCTATGAAGGAGAGAGGGGCCAAGTGTTCACTTAACTTGGGGACGTGGCCCATGGTTGTCTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR TCA 72 bp | GGCTTCGCTGAGATGCAGTCAGCACAATGTCTCCTGTaGATACCTGGCATTTCGTTAACCATGCCACATCCA | + |
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Preference number: 3 (lower is better) Translates to: GFAEMQSAQCLL*IPGISLTMPHP Trigger: TGGATGTGGCATGGTTAACGAAATGCCAGGTATTCACAGGAGACATTGTGCTGACTGCATCTCAGCGAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR TCA 72 bp | GCCCACAGAACCAGTGACTGTCAGCAGCGACTTTATTaGGCATCTGCAAGGTGCACAGCACTGTACATAGTT | + |
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Preference number: 3 (lower is better) Translates to: AHRTSDCQQRLY*ASARCTALYIV Trigger: AACTATGTACAGTGCTGTGCACCTTGCAGATGCTCAATAAAGTCGCTGCTGACAGTCACTGGTTCTGTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR TCA 72 bp | TGCAAATTATTCACTGAAAGGGGAAGGGGGCTTCGCTaGGATGCAGTCAGCACAATGTCTCCTGTGAATACC | + |
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Preference number: 3 (lower is better) Translates to: CKLFTERGRGLR*DAVSTMSPVNT Trigger: GGTATTCACAGGAGACATTGTGCTGACTGCATCTCAGCGAAGCCCCCTTCCCCTTTCAGTGAATAATTTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR TCA 72 bp | GAAACGGGTCAAATACTCTCCGTGTGGTGCTTGCTATaGTCAAAGCATGATCAAAGCACGGATCGTGCCATG | + |
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Preference number: 3 (lower is better) Translates to: ETGQILSVWCLL*SKHDQSTDRAM Trigger: CATGGCACGATCCGTGCTTTGATCATGCTTTGATCATAGCAAGCACCACACGGAGAGTATTTGACCCGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR GCA 72 bp | GACGCTGAGACCGGACAACAATACTCAGACCTAGTTTaGCTTAACTCTCCAAGAGTATTGGGAGACACGAGA | + |
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Preference number: 3 (lower is better) Translates to: DAETGQQYSDLV*LNSPRVLGDTR Trigger: TCTCGTGTCTCCCAATACTCTTGGAGAGTTAAGGCAAACTAGGTCTGAGTATTGTTGTCCGGTCTCAGCGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR GCA 72 bp | CAAGGAAGCTTGCTCGCTGCTGCTAGTCCTCTCTGGTaGTATTCGAATCTTTTCCTGCAGCATTTAATTCCG | + |
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Preference number: 3 (lower is better) Translates to: QGSLLAAASPLW*YSNLFLQHLIP Trigger: CGGAATTAAATGCTGCAGGAAAAGATTCGAATAGCACCAGAGAGGACTAGCAGCAGCGAGCAAGCTTCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR GCA 72 bp | TTCATCTTCCTGATCTTGCAGGTTTTCTTCCTGTGCTaGAGGAAACGGGTCAAATACTCTCCGTGTGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: FIFLILQVFFLC*RKRVKYSPCGA Trigger: AGCACCACACGGAGAGTATTTGACCCGTTTCCTGCAGCACAGGAAGAAAACCTGCAAGATCAGGAAGATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR GCA 72 bp | GTGTTCATCTTCCTGATCTTGCAGGTTTTCTTCCTGTaGTGCAGGAAACGGGTCAAATACTCTCCGTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: VFIFLILQVFFL*CRKRVKYSPCG Trigger: ACCACACGGAGAGTATTTGACCCGTTTCCTGCAGCACAGGAAGAAAACCTGCAAGATCAGGAAGATGAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR CCA 72 bp | CGTTCCCTGGGAACAGCTGGTGTTCTGCCCCCTCTGTaGTTTCTTTCTAGACTCCAAGTCTTTACAACTAAT | + |
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Preference number: 3 (lower is better) Translates to: RSLGTAGVLPPL*FLSRLQVFTTN Trigger: ATTAGTTGTAAAGACTTGGAGTCTAGAAAGAAACCACAGAGGGGGCAGAACACCAGCTGTTCCCAGGGAACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR-3UTR CAA 90 bp | AAAAACTCCAAGCTGAAGACAGGGTTCAACTTCCTAAACCTCCATGTCAGAAGCCCATGCCACATCCAGTaGATACAGAGCCTGTCGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KNSKLKTGFNFLNLHVRSPCHIQ*IQSLSS Trigger: AGACGACAGGCTCTGTATCAACTGGATGTGGCATGG...GCTTCTGACATGGAGGTTTAGGAAGTTGAACCCTGTCTTCAGCTTGGAGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTAGAAAAGCAGCTCCACAAATGACAAAGTTGGCCAACGTCCCCAAGGGCCTGTCCCACAAAGCAAGTTaGGCTCCTTTTGTTATAATT | + |
|
Preference number: 3 (lower is better) Translates to: ARKAAPQMTKLANVPKGLSHKAS*APFVII Trigger: AATTATAACAAAAGGAGCCAAACTTGCTTTGTGGGA...CAGGCCCTTGGGGACGTTGGCCAACTTTGTCATTTGTGGAGCTGCTTTTCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| 3UTR GCA 72 bp | GGAGCACTTTCCACCTCTGCAACCTTGATGACCGAATaGATGTTGCTAGGTAAATGGATGAAGAAGAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GALSTSATLMTE*MLLGKWMKKSR Trigger: TCTGCTCTTCTTCATCCATTTACCTAGCAACATGCATTCGGTCATCAAGGTTGCAGAGGTGGAAAGTGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| 3UTR GCA 72 bp | TTCCTTATTTATAATTTTCATAAGAAGCCTGGGTCATaGCAGGTGTTTCCCTCTGAGTCGGAGCGCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FLIYNFHKKPGS*QVFPSESERSP Trigger: AGGACTGCGCTCCGACTCAGAGGGAAACACCTGGCATGACCCAGGCTTCTTATGAAAATTATAAATAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| 3UTR TCA 72 bp | GGTTTTGTCTCACGCTCATTAAAGTGTTCATCTTCCTaGTCTTGCAGGTTTTCTTCCTGTGCTGCAGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GFVSRSLKCSSS*SCRFSSCAAGN Trigger: GTTTCCTGCAGCACAGGAAGAAAACCTGCAAGATCAGGAAGATGAACACTTTAATGAGCGTGAGACAAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR CCA 72 bp | TTCCTCTACACCTGGAGGGACCAGCTCTACTCCAACTaGGGCTGCATTCAATTTTTATTGTGTTATATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: FLYTWRDQLYSN*GCIQFLLCYIW Trigger: CCAAATATAACACAATAAAAATTGAATGCAGCCCCAGTTGGAGTAGAGCTGGTCCCTCCAGGTGTAGAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| 3UTR GCA 72 bp | CAAATGATTCCTTATAAGGGGTTTGTGCACAATGAGTaGCCTCCTAGGGCCTCTCAGAATGCAAATTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: QMIPYKGFVHNE*PPRASQNANYS Trigger: TGAATAATTTGCATTCTGAGAGGCCCTAGGAGGGCACTCATTGTGCACAAACCCCTTATAAGGAATCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAACTCTTTGGAATGCTAAGAAGAAGATACTAGAAAATCCATTCTCACCATGGAACTCTCCAAGAGTATaGGGAGACACGAGATACCGT | + |
|
Preference number: 3 (lower is better) Translates to: ATLWNAKKKILENPFSPWNSPRV*GDTRYR Trigger: ACGGTATCTCGTGTCTCCCAATACTCTTGGAGAGTT...CCATGGTGAGAATGGATTTTCTAGTATCTTCTTCTTAGCATTCCAAAGAGTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| 3UTR GCA 72 bp | TACACCTGGAGGGACCAGCTCTACTCCAACTGGGGCTaGATTCAATTTTTATTGTGTTATATTTGGCATAAA | + |
|
Preference number: 3 (lower is better) Translates to: YTWRDQLYSNWG*IQFLLCYIWHK Trigger: TTTATGCCAAATATAACACAATAAAAATTGAATGCAGCCCCAGTTGGAGTAGAGCTGGTCCCTCCAGGTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCTCTGTGGTTTCTTTCTAGACTCCAAGTCTTTACAACTAATTTCCAGACATTAACATGCAGATCTTaGTGTTTAATGTCACCAACC | + |
|
Preference number: 3 (lower is better) Translates to: PPLWFLSRLQVFTTNFQTLTCRS*CLMSPT Trigger: GGTTGGTGACATTAAACACAAAGATCTGCATGTTAA...TGTCTGGAAATTAGTTGTAAAGACTTGGAGTCTAGAAAGAAACCACAGAGGGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTCGTCTGCTGTCCCGACCAGTGGCTGTCATGGCCGCAAGGAAGCTTGCTCAGCAGGGCAGACCTCTaGCTTTGGGTGCTGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVCCPDQWLSWPQGSLLSRADL*LWVLAR Trigger: CCTCGCCAGCACCCAAAGCCAGAGGTCTGCCCTGCT...GAGCAAGCTTCCTTGCGGCCATGACAGCCACTGGTCGGGACAGCAGACGAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR TCA 90 bp | GGGCTCGTCTGCTGTCCCGACCAGTGGCTGTCATGGCCGCAAGGAAGCTTGCTCAGTGTCAAAGAGGAGTaGGAGGGTGCCACCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLVCCPDQWLSWPQGSLLSVKEE*EGATQA Trigger: GGCCTGGGTGGCACCCTCTCACTCCTCTTTGACACT...GAGCAAGCTTCCTTGCGGCCATGACAGCCACTGGTCGGGACAGCAGACGAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCATTTAATTCCGGCTCCACACACATTCGTTCCCTGGGAACAGCTGGTGGGCCTGCAACAGCCCTaGCAGGGCCAGGAGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQHLIPAPHTFVPWEQLVGLQQP*QGQEAA Trigger: GGCGGCCTCCTGGCCCTGGCAGGGCTGTTGCAGGCC...CACCAGCTGTTCCCAGGGAACGAATGTGTGTGGAGCCGGAATTAAATGCTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR GCA 90 bp | CACACAGGGAGGCAGCAGTTGGTCACTGGGTATATTCAGCATTCGCAGGACTTCGGCCTGCAACAGCCCTaGCAGGGCCAGGAGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTGRQQLVTGYIQHSQDFGLQQP*QGQEAA Trigger: GGCGGCCTCCTGGCCCTGGCAGGGCTGTTGCAGGCC...GAAGTCCTGCGAATGCTGAATATACCCAGTGACCAACTGCTGCCTCCCTGTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214236.2 |
||
| CDS-3UTR GCA 90 bp | CACACACATTCGTTCCCTGGGAACAGCTGGTGTTCTGCCCCCTCTGTGGTTTCTAGCAGCAGCCGGGCCTaGAACAGCCCTGCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTHSFPGNSWCSAPSVVSSSSRA*NSPARA Trigger: GGCCCTGGCAGGGCTGTTGCAGGCCCGGCTGCTGCT...AGAAACCACAGAGGGGGCAGAACACCAGCTGTTCCCAGGGAACGAATGTGTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR GCA 90 bp | GCTAGAAAAGCAGCTCCACAAATGACAAAGTTGGCCAACGTCCCCAAGGGCCTGCCGAAGCCCGCTTGCTaGGGGAGCAGCAGCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARKAAPQMTKLANVPKGLPKPAC*GSSSRA Trigger: GGCCCGGCTGCTGCTCCCGCAGCAAGCGGGCTTCGG...CAGGCCCTTGGGGACGTTGGCCAACTTTGTCATTTGTGGAGCTGCTTTTCTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR GCA 90 bp | CACACAGGGAGGCAGCAGTTGGTCACTGGGTATATTCAGCATTCGCAGGACTTCAGCAGCAGCCGGGCCTaGAACAGCCCTGCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTGRQQLVTGYIQHSQDFSSSRA*NSPARA Trigger: GGCCCTGGCAGGGCTGTTGCAGGCCCGGCTGCTGCT...GAAGTCCTGCGAATGCTGAATATACCCAGTGACCAACTGCTGCCTCCCTGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214236.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTCGTCTGCTGTCCCGACCAGTGGCTGTCATGGCCGCAAGGAAGCTTGCTCGACTGCACAGCAAGCTaGCAGCCAGACGAATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVCCPDQWLSWPQGSLLDCTAS*QPDEFR Trigger: CCTGAATTCGTCTGGCTGGCAGCTTGCTGTGCAGTC...GAGCAAGCTTCCTTGCGGCCATGACAGCCACTGGTCGGGACAGCAGACGAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR GCA 90 bp | GCTAGAAAAGCAGCTCCACAAATGACAAAGTTGGCCAACGTCCCCAAGGGCCTGCCCTCCCTCTGGTGGTaGTTCTGGGGACAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARKAAPQMTKLANVPKGLPSLWW*FWGQQG Trigger: GCCCTGCTGTCCCCAGAAGCACCACCAGAGGGAGGG...CAGGCCCTTGGGGACGTTGGCCAACTTTGTCATTTGTGGAGCTGCTTTTCTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR GCA 90 bp | GACCTAGGCAAAGGTCAGAGCCCCAGCAGATGCTACCACCGAGAGGGAGAAATTAGAGGAGTGAGAGGGTaGCACCCAGGCCCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DLGKGQSPSRCYHREGEIRGVRG*HPGPQQ Trigger: TTGCTGTGGGCCTGGGTGGCACCCTCTCACTCCTCT...AATTTCTCCCTCTCGGTGGTAGCATCTGCTGGGGCTCTGACCTTTGCCTAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGAGCCCCAGCAGATGCTACCACCGAGAGGGAGAAATTTCAGCAGAGCACTCTGGTGGTGCTTCTaGGGACAGCAGGGCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: RSEPQQMLPPRGRNFSRALWWCF*GQQGRP Trigger: AGGTCTGCCCTGCTGTCCCCAGAAGCACCACCAGAG...TGCTCTGCTGAAATTTCTCCCTCTCGGTGGTAGCATCTGCTGGGGCTCTGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCAGAGCCCCAGCAGATGCTACCACCGAGAGGGAGAAATTTCAGCAGAGCACTTAACTCTGTGCTCTaGGGGAACAGCCCCCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSEPQQMLPPRGRNFSRALNSVL*GNSPRE Trigger: CTCACGGGGGCTGTTCCCTCAGAGCACAGAGTTAAG...TGCTCTGCTGAAATTTCTCCCTCTCGGTGGTAGCATCTGCTGGGGCTCTGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTCGTCTGCTGTCCCGACCAGTGGCTGTCATGGCCGCAAGGAAGCTTGCTCTGTTTATTGCCTGCTTaGCAACCAACCAAAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLVCCPDQWLSWPQGSLLCLLPA*QPTKGD Trigger: ATCTCCTTTGGTTGGTTGCCAAGCAGGCAATAAACA...GAGCAAGCTTCCTTGCGGCCATGACAGCCACTGGTCGGGACAGCAGACGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCATTTAATTCCGGCTCCACACACATTCGTTCCCTGGGAACAGCTGGTGCTTGTCCCAGAAAACTaGTCCCTCCCTCTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQHLIPAPHTFVPWEQLVLVPEN*SLPLVV Trigger: CACCACCAGAGGGAGGGAGCAGTTTTCTGGGACAAG...CACCAGCTGTTCCCAGGGAACGAATGTGTGTGGAGCCGGAATTAAATGCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR GCA 90 bp | GCTAGAAAAGCAGCTCCACAAATGACAAAGTTGGCCAACGTCCCCAAGGGCCTGGGTCTTTGCCTTCACTaGAGTGTGGGATCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARKAAPQMTKLANVPKGLGLCLH*SVGSRL Trigger: GAGCCTTGATCCCACACTGCAGTGAAGGCAAAGACC...CAGGCCCTTGGGGACGTTGGCCAACTTTGTCATTTGTGGAGCTGCTTTTCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR GCA 90 bp | GCAAAGGTCAGAGCCCCAGCAGATGCTACCACCGAGAGGGAGAAATTTCAGCAGCATTCAAGGCTTGCTTaGTTCCCAGATTGTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: AKVRAPADATTEREKFQQHSRLA*FPDCPL Trigger: CAGTGGACAATCTGGGAAGCAAGCAAGCCTTGAATG...CTGCTGAAATTTCTCCCTCTCGGTGGTAGCATCTGCTGGGGCTCTGACCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGGTCAGAGCCCCAGCAGATGCTACCACCGAGAGGGAGAAATTTCAGCAGATGACATCAATGTCCTaGGTGTGCTTGATGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AKVRAPADATTEREKFQQMTSMS*VCLMKP Trigger: GGGCTTCATCAAGCACACCCAGGACATTGATGTCAT...CTGCTGAAATTTCTCCCTCTCGGTGGTAGCATCTGCTGGGGCTCTGACCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR GCA 90 bp | GACCTAGGCAAAGGTCAGAGCCCCAGCAGATGCTACCACCGAGAGGGAGAAATTCTCAACAGTGTTTATTaGCTGCTTGGCAACCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: DLGKGQSPSRCYHREGEILNSVY*LLGNQP Trigger: TGGTTGGTTGCCAAGCAGGCAATAAACACTGTTGAG...AATTTCTCCCTCTCGGTGGTAGCATCTGCTGGGGCTCTGACCTTTGCCTAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR GCA 90 bp | CAGCATTTAATTCCGGCTCCACACACATTCGTTCCCTGGGAACAGCTGGTGTTCGCACTTTCCAGGGAATaGTCACCAGCTCTTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QHLIPAPHTFVPWEQLVFALSRE*SPALVQ Trigger: TTGGACAAGAGCTGGTGAGCATTCCCTGGAAAGTGC...GAACACCAGCTGTTCCCAGGGAACGAATGTGTGTGGAGCCGGAATTAAATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR TCA 90 bp | TCAGACCTAGTTTGCCTTAACTCTCCAAGAGTATTGGGAGACACGAGATACCGTGGACTCATTCTCTCTTaGGACTGCAGAGACCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SDLVCLNSPRVLGDTRYRGLILS*DCRDRS Trigger: GGAGCGGTCTCTGCAGTCTCAAGAGAGAATGAGTCC...ACGGTATCTCGTGTCTCCCAATACTCTTGGAGAGTTAAGGCAAACTAGGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCTCTGTGGTTTCTTTCTAGACTCCAAGTCTTTACAACTAATTTCCAGACAACTGCTCCCTCCCTCTaGTGGTGCTTCTGGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: PPLWFLSRLQVFTTNFQTTAPSL*WCFWGQ Trigger: CTGTCCCCAGAAGCACCACCAGAGGGAGGGAGCAGT...TGTCTGGAAATTAGTTGTAAAGACTTGGAGTCTAGAAAGAAACCACAGAGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR GCA 90 bp | CCTTATAGATGGAGCACTTTCCACCTCTGCAACCTTGATGACCGAATGCATGTTTCAATGTCCTGGGTGTaGTTGATGAAGCCCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PYRWSTFHLCNLDDRMHVSMSWV*LMKPMA Trigger: GGCCATGGGCTTCATCAAGCACACCCAGGACATTGA...AACATGCATTCGGTCATCAAGGTTGCAGAGGTGGAAAGTGCTCCATCTATAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| 3UTR CAA 72 bp | CTTTCCACCTCTGCAACCTTGATGACCGAATGCATGTaGCTAGGTAAATGGATGAAGAAGAGCAGAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSTSATLMTECM*LGKWMKKSRGS Trigger: GCTCCCTCTGCTCTTCTTCATCCATTTACCTAGCAACATGCATTCGGTCATCAAGGTTGCAGAGGTGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR GCA 90 bp | TACACCTGGAGGGACCAGCTCTACTCCAACTGGGGCTGCATTCAATTTTTATTGTCTGCATTCAAGGCTTaGTTGCTTCCCAGATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTWRDQLYSNWGCIQFLLSAFKA*LLPRLS Trigger: GGACAATCTGGGAAGCAAGCAAGCCTTGAATGCAGA...CAATAAAAATTGAATGCAGCCCCAGTTGGAGTAGAGCTGGTCCCTCCAGGTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR GCA 90 bp | CCATCAGCCCAGAGATCTGGAAGGACTTTAAAAACAAATACAGCTAGTTCCAGTCCACAGCAATGTCCTTaGACACAATGGGAATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PSAQRSGRTLKTNTASSSPQQCP*TQWEWP Trigger: GGGCCATTCCCATTGTGTGCAAGGACATTGCTGTGG...ACTGGAACTAGCTGTATTTGTTTTTAAAGTCCTTCCAGATCTCTGGGCTGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CCA 90 bp | GATGGGCCATCAGCCCAGAGATCTGGAAGGACTTTAAAAACAAATACAGCTAGTTGTCCTTGCACACAATaGGAATGGCCCCCACAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: DGPSAQRSGRTLKTNTASCPCTQ*EWPPQY Trigger: ATACTGTGGGGGCCATTCCCATTGTGTGCAAGGACA...ACTAGCTGTATTTGTTTTTAAAGTCCTTCCAGATCTCTGGGCTGATGGCCCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| 3UTR CAA 72 bp | TGTCTCACGCTCATTAAAGTGTTCATCTTCCTGATCTaGCAGGTTTTCTTCCTGTGCTGCAGGAAACGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLTLIKVFIFLI*QVFFLCCRKRV Trigger: GACCCGTTTCCTGCAGCACAGGAAGAAAACCTGCAAGATCAGGAAGATGAACACTTTAATGAGCGTGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR GCA 90 bp | TACACCTGGAGGGACCAGCTCTACTCCAACTGGGGCTGCATTCAATTTTTATTGATCTTCTCTGTATCTTaGTCCATCTCACCACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YTWRDQLYSNWGCIQFLLIFSVS*SISPQL Trigger: CAACTGTGGTGAGATGGAGCAAGATACAGAGAAGAT...CAATAAAAATTGAATGCAGCCCCAGTTGGAGTAGAGCTGGTCCCTCCAGGTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR CCA 90 bp | TACACCTGGAGGGACCAGCTCTACTCCAACTGGGGCTGCATTCAATTTTTATTGACTGTTAAGAGGAAATaGGTACAGCTGTCCGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: YTWRDQLYSNWGCIQFLLTVKRK*VQLSDF Trigger: GAAATCGGACAGCTGTACCCATTTCCTCTTAACAGT...CAATAAAAATTGAATGCAGCCCCAGTTGGAGTAGAGCTGGTCCCTCCAGGTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR CCA 90 bp | CCTTATAGATGGAGCACTTTCCACCTCTGCAACCTTGATGACCGAATGCATGTTTATACACAGGGAAAGTaGCTACATCCACAAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: PYRWSTFHLCNLDDRMHVYTQGK*LHPQGL Trigger: GAGTCCTTGTGGATGTAGCCACTTTCCCTGTGTATA...AACATGCATTCGGTCATCAAGGTTGCAGAGGTGGAAAGTGCTCCATCTATAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| 3UTR CAA 72 bp | CTCCTTATAGATGGAGCACTTTCCACCTCTGCAACCTaGATGACCGAATGCATGTTGCTAGGTAAATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLIDGALSTSAT*MTECMLLGKWM Trigger: CATCCATTTACCTAGCAACATGCATTCGGTCATCAAGGTTGCAGAGGTGGAAAGTGCTCCATCTATAAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR TCA 90 bp | GCAACTCTTTGGAATGCTAAGAAGAAGATACTAGAAAATCCATTCTCACCATGGCTTTGGCCACAACCTTaGGCACTTTCCAGGGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: ATLWNAKKKILENPFSPWLWPQP*ALSREC Trigger: GCATTCCCTGGAAAGTGCTCAAGGTTGTGGCCAAAG...CCATGGTGAGAATGGATTTTCTAGTATCTTCTTCTTAGCATTCCAAAGAGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR GCA 90 bp | CCATCAGCCCAGAGATCTGGAAGGACTTTAAAAACAAATACAGCTAGTTCCAGTCTGTTGAGATTCATGTaGCATCGTTCCCGGAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSAQRSGRTLKTNTASSSLLRFM*HRSRKD Trigger: GTCTTTCCGGGAACGATGGCACATGAATCTCAACAG...ACTGGAACTAGCTGTATTTGTTTTTAAAGTCCTTCCAGATCTCTGGGCTGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR GCA 90 bp | CCCCCTCTGTGGTTTCTTTCTAGACTCCAAGTCTTTACAACTAATTTCCAGACAACAAGCCACCTACGGTaGCAAAAGCAGTGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPLWFLSRLQVFTTNFQTTSHLR*QKQCQR Trigger: TCTTTGACACTGCTTTTGGCACCGTAGGTGGCTTGT...TGTCTGGAAATTAGTTGTAAAGACTTGGAGTCTAGAAAGAAACCACAGAGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR TCA 90 bp | AAATCCATTCTCACCATGGGAATATTTGGTTCCCACAAAGCAAGTTTGGCTCCTGCATCACATCTTCTATaGCATCAATGTCCTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSILTMGIFGSHKASLAPASHLL*HQCPGC Trigger: ACACCCAGGACATTGATGTCATAGAAGATGTGATGC...AGGAGCCAAACTTGCTTTGTGGGAACCAAATATTCCCATGGTGAGAATGGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR CCA 90 bp | AAATCCATTCTCACCATGGGAATATTTGGTTCCCACAAAGCAAGTTTGGCTCCTTCCTCATCTTGGACTTaGTTGACCACTTCCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: KSILTMGIFGSHKASLAPSSSWT*LTTSRI Trigger: GATTCTGGAAGTGGTCAACCAAGTCCAAGATGAGGA...AGGAGCCAAACTTGCTTTGTGGGAACCAAATATTCCCATGGTGAGAATGGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS-3UTR TCA 90 bp | AAATCCATTCTCACCATGGGAATATTTGGTTCCCACAAAGCAAGTTTGGCTCCTACACTAAAAACAATCTaGAACAAGCCACCTACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSILTMGIFGSHKASLAPTLKTI*NKPPTV Trigger: CACCGTAGGTGGCTTGTTTCAGATTGTTTTTAGTGT...AGGAGCCAAACTTGCTTTGTGGGAACCAAATATTCCCATGGTGAGAATGGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| 3UTR CAA 72 bp | TACTCAGACCTAGTTTGCCTTAACTCTCCAAGAGTATaGGGAGACACGAGATACCGTTTCTTTCAGCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: YSDLVCLNSPRV*GDTRYRFFQHL Trigger: TAAATGCTGAAAGAAACGGTATCTCGTGTCTCCCAATACTCTTGGAGAGTTAAGGCAAACTAGGTCTGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR CAA 72 bp | CTCACCATGGGAATATTTGGTTCCCACAAAGCAAGTTaGGCTCCTTTTGTTATAATTTCTAGTGCAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LTMGIFGSHKAS*APFVIISSARF Trigger: AAATCTTGCACTAGAAATTATAACAAAAGGAGCCAAACTTGCTTTGTGGGAACCAAATATTCCCATGGTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| 3UTR CAA 72 bp | AAGATACTAGAAAATCCATTCTCACCATGGGAATATTaGGTTCCCACAAAGCAAGTTTGGCTCCTTTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KILENPFSPWEY*VPTKQVWLLLL Trigger: TAACAAAAGGAGCCAAACTTGCTTTGTGGGAACCAAATATTCCCATGGTGAGAATGGATTTTCTAGTATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS GCA 90 bp | TGCGGGACGCCGGGCGCGCAGCGCGAAACGCGGAGAACACGGGGATaGGGTGGCCAGGACTGTACAGAGTGGCGAAGCGCTCGGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CGTPGAQRETRRTRG*GGQDCTEWRSARSP Trigger: CGGGCTCCGAGCGCTTCGCCACTCTGTACAGTCCTGGCCACCGCATCCCCGTGTTCTCCGCGTTTCGCGCTGCGCGCCCGGCGTCCCGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167549.2 ENSMUST00000214236.2 |
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| CDS GCA 90 bp | AGGTTGCTGTCAGGGTCATCAATCTGCGGCTCCAGCAGCCCGCGCTaGTCGGCACTGCGGGACGCCGGGCGCGCAGCGCGAAACGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLLSGSSICGSSSPR*SALRDAGRAARNAE Trigger: CTCCGCGTTTCGCGCTGCGCGCCCGGCGTCCCGCAGTGCCGAGCAGCGCGGGCTGCTGGAGCCGCAGATTGATGACCCTGACAGCAACCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CCA 90 bp | GACGCCGGGCGCGCAGCGCGAAACGCGGAGAACACGGGGATGCGGTaGCCAGGACTGTACAGAGTGGCGAAGCGCTCGGAGCCCGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DAGRAARNAENTGMR*PGLYRVAKRSEPAK Trigger: CTTCGCGGGCTCCGAGCGCTTCGCCACTCTGTACAGTCCTGGCCACCGCATCCCCGTGTTCTCCGCGTTTCGCGCTGCGCGCCCGGCGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167549.2 ENSMUST00000214236.2 |
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| CDS TCA 90 bp | CCAGGACTGTACAGAGTGGCGAAGCGCTCGGAGCCCGCGAAGCGTTaGCAGATCCTCACGTGCGCTTCGGTCGCCAGCCCGGCGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGLYRVAKRSEPAKR*QILTCASVASPAGG Trigger: CCCACCCGCCGGGCTGGCGACCGAAGCGCACGTGAGGATCTGTCAACGCTTCGCGGGCTCCGAGCGCTTCGCCACTCTGTACAGTCCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167549.2 ENSMUST00000214236.2 |
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| CDS CCA 90 bp | GAAACGCGGAGAACACGGGGATGCGGTGGCCAGGACTGTACAGAGTaGCGAAGCGCTCGGAGCCCGCGAAGCGTTGACAGATCCTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: ETRRTRGCGGQDCTE*RSARSPRSVDRSSR Trigger: ACGTGAGGATCTGTCAACGCTTCGCGGGCTCCGAGCGCTTCGCCACTCTGTACAGTCCTGGCCACCGCATCCCCGTGTTCTCCGCGTTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167549.2 ENSMUST00000214236.2 |
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| CDS CCA 90 bp | CAGGACTTGTCCCAGAAAACTGCTCCCTCCCTCTGGTGGTGCTTCTaGGGACAGCAGGGCAGACCTCTGGCTTTGGGTGCTGGCGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QDLSQKTAPSLWWCF*GQQGRPLALGAGEG Trigger: CCCCTCGCCAGCACCCAAAGCCAGAGGTCTGCCCTGCTGTCCCCAGAAGCACCACCAGAGGGAGGGAGCAGTTTTCTGGGACAAGTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS GCA 90 bp | CTGGTGGTGCTTCTGGGGACAGCAGGGCAGACCTCTGGCTTTGGGTaGTGGCGAGGGGACTCATTCTCTCTTGAGACTGCAGAGACCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LVVLLGTAGQTSGFG*WRGDSFSLETAETA Trigger: AGCGGTCTCTGCAGTCTCAAGAGAGAATGAGTCCCCTCGCCAGCACCCAAAGCCAGAGGTCTGCCCTGCTGTCCCCAGAAGCACCACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS GCA 90 bp | GAAACCCAGGACTTGTCCCAGAAAACTGCTCCCTCCCTCTGGTGGTaGTTCTGGGGACAGCAGGGCAGACCTCTGGCTTTGGGTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ETQDLSQKTAPSLWW*FWGQQGRPLALGAG Trigger: GCCAGCACCCAAAGCCAGAGGTCTGCCCTGCTGTCCCCAGAAGCACCACCAGAGGGAGGGAGCAGTTTTCTGGGACAAGTCCTGGGTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS CCA 90 bp | GTGGTGCTTCTGGGGACAGCAGGGCAGACCTCTGGCTTTGGGTGCTaGCGAGGGGACTCATTCTCTCTTGAGACTGCAGAGACCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VVLLGTAGQTSGFGC*RGDSFSLETAETAP Trigger: AGGAGCGGTCTCTGCAGTCTCAAGAGAGAATGAGTCCCCTCGCCAGCACCCAAAGCCAGAGGTCTGCCCTGCTGTCCCCAGAAGCACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS GCA 90 bp | AGCCACCTACGGTGCCAAAAGCAGTGTCAAAGAGGAGTGAGAGGGTaGCACCCAGGCCCACAGCAATGTCCTTGCACACAATGGGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: SHLRCQKQCQRGVRG*HPGPQQCPCTQWEW Trigger: CCATTCCCATTGTGTGCAAGGACATTGCTGTGGGCCTGGGTGGCACCCTCTCACTCCTCTTTGACACTGCTTTTGGCACCGTAGGTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
||
| CDS CCA 90 bp | CCTTGCACACAATGGGAATGGCCCCCACAGTATACACAGGGAAAGTaGCTACATCCACAAGGACTCGGAGAGGGATGCTCAGAGCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PCTQWEWPPQYTQGK*LHPQGLGEGCSELG Trigger: GCCGAGCTCTGAGCATCCCTCTCCGAGTCCTTGTGGATGTAGCCACTTTCCCTGTGTATACTGTGGGGGCCATTCCCATTGTGTGCAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CCA 90 bp | GGGTGCCACCCAGGCCCACAGCAATGTCCTTGCACACAATGGGAATaGCCCCCACAGTATACACAGGGAAAGTGGCTACATCCACAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GCHPGPQQCPCTQWE*PPQYTQGKWLHPQG Trigger: TCCTTGTGGATGTAGCCACTTTCCCTGTGTATACTGTGGGGGCCATTCCCATTGTGTGCAAGGACATTGCTGTGGGCCTGGGTGGCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS GCA 90 bp | TATACACAGGGAAAGTGGCTACATCCACAAGGACTCGGAGAGGGATaGTCAGAGCTCGGCAGACAGCCTTCAGCAGACAGCAGAGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: YTQGKWLHPQGLGEG*SELGRQPSADSRGS Trigger: GGATCCTCTGCTGTCTGCTGAAGGCTGTCTGCCGAGCTCTGAGCATCCCTCTCCGAGTCCTTGTGGATGTAGCCACTTTCCCTGTGTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | GACCTAGGCAAAGGTCAGAGCCCCAGCAGATGCTACCACCGAGAGGGAGAAATTAAGGCCCGGATGACTTaGGCCACAACCTTGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: DLGKGQSPSRCYHREGEIKARMT*ATTLST Trigger: AGTGCTCAAGGTTGTGGCCAAAGTCATCCGGGCCTT...AATTTCTCCCTCTCGGTGGTAGCATCTGCTGGGGCTCTGACCTTTGCCTAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | GCAAAGGTCAGAGCCCCAGCAGATGCTACCACCGAGAGGGAGAAATTTCAGCAGCCCACAGCAATGTCCTaGCACACAATGGGAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AKVRAPADATTEREKFQQPTAMS*HTMGMA Trigger: GGCCATTCCCATTGTGTGCAAGGACATTGCTGTGGG...CTGCTGAAATTTCTCCCTCTCGGTGGTAGCATCTGCTGGGGCTCTGACCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | CAGCATTTAATTCCGGCTCCACACACATTCGTTCCCTGGGAACAGCTGGTGTTCATGTCCTGGGTGTGCTaGATGAAGCCCATGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QHLIPAPHTFVPWEQLVFMSWVC*MKPMAQ Trigger: CTGGGCCATGGGCTTCATCAAGCACACCCAGGACAT...GAACACCAGCTGTTCCCAGGGAACGAATGTGTGTGGAGCCGGAATTAAATGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | GCAAAGGTCAGAGCCCCAGCAGATGCTACCACCGAGAGGGAGAAATTTCAGCAGGCATTCAAGGCTTGCTaGCTTCCCAGATTGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: AKVRAPADATTEREKFQQAFKAC*LPRLST Trigger: AGTGGACAATCTGGGAAGCAAGCAAGCCTTGAATGC...CTGCTGAAATTTCTCCCTCTCGGTGGTAGCATCTGCTGGGGCTCTGACCTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | GCTAGAAAAGCAGCTCCACAAATGACAAAGTTGGCCAACGTCCCCAAGGGCCTGCGGTCCATGAGGCTGTaGAGATTCATGTGCCATCGT | + |
|
Preference number: 5 (lower is better) Translates to: ARKAAPQMTKLANVPKGLRSMRL*RFMCHR Trigger: ACGATGGCACATGAATCTCAACAGCCTCATGGACCG...CAGGCCCTTGGGGACGTTGGCCAACTTTGTCATTTGTGGAGCTGCTTTTCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | CAGCATTTAATTCCGGCTCCACACACATTCGTTCCCTGGGAACAGCTGGTGTTCAGACCGCTCCTCATCTaGGACTTGGTTGACCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QHLIPAPHTFVPWEQLVFRPLLI*DLVDHF Trigger: GAAGTGGTCAACCAAGTCCAAGATGAGGAGCGGTCT...GAACACCAGCTGTTCCCAGGGAACGAATGTGTGTGGAGCCGGAATTAAATGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | CCATCAGCCCAGAGATCTGGAAGGACTTTAAAAACAAATACAGCTAGTTCCAGTGGCAGACCTCTGGCTTaGGGTGCTGGCGAGGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: PSAQRSGRTLKTNTASSSGRPLA*GAGEGT Trigger: AGTCCCCTCGCCAGCACCCAAAGCCAGAGGTCTGCC...ACTGGAACTAGCTGTATTTGTTTTTAAAGTCCTTCCAGATCTCTGGGCTGATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | CTAGGCATGCCTGTGGACACACAGCACTGCTTCATGCTGCTTCCTCTACACCTGGTGTTTATTGCCTGCTaGGCAACCAACCAAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGMPVDTQHCFMLLPLHLVFIAC*ATNQRR Trigger: TCTCCTTTGGTTGGTTGCCAAGCAGGCAATAAACAC...CAGGTGTAGAGGAAGCAGCATGAAGCAGTGCTGTGTGTCCACAGGCATGCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | TTCGTTCCCTGGGAACAGCTGGTGTTCTGCCCCCTCTGTGGTTTCTTTCTAGACTCAGGGATAGTCACTTaGCCCTTAACTCTGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FVPWEQLVFCPLCGFFLDSGIVT*PLTLCS Trigger: AGAGCACAGAGTTAAGGGCAAAGTGACTATCCCTGA...GTCTAGAAAGAAACCACAGAGGGGGCAGAACACCAGCTGTTCCCAGGGAACGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | TCAGACCTAGTTTGCCTTAACTCTCCAAGAGTATTGGGAGACACGAGATACCGTGGGACTCATTCTCTCTaGAGACTGCAGAGACCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SDLVCLNSPRVLGDTRYRGTHSL*RLQRPL Trigger: GAGCGGTCTCTGCAGTCTCAAGAGAGAATGAGTCCC...ACGGTATCTCGTGTCTCCCAATACTCTTGGAGAGTTAAGGCAAACTAGGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CCA 90 bp | TGTGAGCGGGAATGTGGCCATCTGGAGGTCACTGTTAAGAGGAAATaGGTACAGCTGTCCGATTTCATAGTCAGAGTCAATGTAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CERECGHLEVTVKRK*VQLSDFIVRVNVVC Trigger: GCAGACTACATTGACTCTGACTATGAAATCGGACAGCTGTACCCATTTCCTCTTAACAGTGACCTCCAGATGGCCACATTCCCGCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CCA 90 bp | GAATGCTCACCAGCTCTTGTCCAATGGCCACGAGGTATGAGACAGTaGCTTCGCCTAGATGGTATAGGCAACTCTCAACAGTGTTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: ECSPALVQWPRGMRQ*LRLDGIGNSQQCLL Trigger: CAATAAACACTGTTGAGAGTTGCCTATACCATCTAGGCGAAGCCACTGTCTCATACCTCGTGGCCATTGGACAAGAGCTGGTGAGCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | TACACCTGGAGGGACCAGCTCTACTCCAACTGGGGCTGCATTCAATTTTTATTGAGGATATACAGGTCTTaGCCTTCACTGCAGTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: YTWRDQLYSNWGCIQFLLRIYRS*PSLQCG Trigger: CCCACACTGCAGTGAAGGCAAAGACCTGTATATCCT...CAATAAAAATTGAATGCAGCCCCAGTTGGAGTAGAGCTGGTCCCTCCAGGTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS TCA 90 bp | TTCTCTCTTGAGACTGCAGAGACCGCTCCTCATCTTGGACTTGGTTaGCCACTTCCAGAATCTTCTTCATCTTCTCTGTATCTTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FSLETAETAPHLGLG*PLPESSSSSLYLAP Trigger: TGGAGCAAGATACAGAGAAGATGAAGAAGATTCTGGAAGTGGTCAACCAAGTCCAAGATGAGGAGCGGTCTCTGCAGTCTCAAGAGAGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | AAAAACTCCAAGCTGAAGACAGGGTTCAACTTCCTAAACCTCCATGTCAGAAGCGTTGTCCTGGAACAGTaGAGGCTTATGAGGAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KNSKLKTGFNFLNLHVRSVVLEQ*RLMRKQ Trigger: CTGCTTCCTCATAAGCCTCAACTGTTCCAGGACAAC...GCTTCTGACATGGAGGTTTAGGAAGTTGAACCCTGTCTTCAGCTTGGAGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | CCATCAGCCCAGAGATCTGGAAGGACTTTAAAAACAAATACAGCTAGTTCCAGTGTCTGCATTCAAGGCTaGCTTGCTTCCCAGATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSAQRSGRTLKTNTASSSVCIQG*LASQIV Trigger: GACAATCTGGGAAGCAAGCAAGCCTTGAATGCAGAC...ACTGGAACTAGCTGTATTTGTTTTTAAAGTCCTTCCAGATCTCTGGGCTGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | AAATCCATTCTCACCATGGGAATATTTGGTTCCCACAAAGCAAGTTTGGCTCCTTCTCAACAGTGTTTATaGCCTGCTTGGCAACCAACC | + |
|
Preference number: 5 (lower is better) Translates to: KSILTMGIFGSHKASLAPSQQCL*PAWQPT Trigger: GGTTGGTTGCCAAGCAGGCAATAAACACTGTTGAGA...AGGAGCCAAACTTGCTTTGTGGGAACCAAATATTCCCATGGTGAGAATGGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | CCATCAGCCCAGAGATCTGGAAGGACTTTAAAAACAAATACAGCTAGTTCCAGTTCATCTTGGACTTGGTaGACCACTTCCAGAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSAQRSGRTLKTNTASSSSSWTW*TTSRIF Trigger: GAAGATTCTGGAAGTGGTCAACCAAGTCCAAGATGA...ACTGGAACTAGCTGTATTTGTTTTTAAAGTCCTTCCAGATCTCTGGGCTGATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS-3UTR CAA 90 bp | GCAACTCTTTGGAATGCTAAGAAGAAGATACTAGAAAATCCATTCTCACCATGGCTCCTCATCTTGGACTaGGTTGACCACTTCCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ATLWNAKKKILENPFSPWLLILD*VDHFQN Trigger: ATTCTGGAAGTGGTCAACCAAGTCCAAGATGAGGAG...CCATGGTGAGAATGGATTTTCTAGTATCTTCTTCTTAGCATTCCAAAGAGTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS GCA 72 bp | CAATCTGCGGCTCCAGCAGCCCGCGCTGCTCGGCACTaGGGGACGCCGGGCGCGCAGCGCGAAACGCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QSAAPAARAARH*GTPGAQRETRR Trigger: TCTCCGCGTTTCGCGCTGCGCGCCCGGCGTCCCGCAGTGCCGAGCAGCGCGGGCTGCTGGAGCCGCAGATTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS GCA 72 bp | TCAGGGTCATCAATCTGCGGCTCCAGCAGCCCGCGCTaGTCGGCACTGCGGGACGCCGGGCGCGCAGCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: SGSSICGSSSPR*SALRDAGRAAR Trigger: TCGCGCTGCGCGCCCGGCGTCCCGCAGTGCCGAGCAGCGCGGGCTGCTGGAGCCGCAGATTGATGACCCTGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 90 bp | GCCAGGACTGTACAGAGTGGCGAAGCGCTCGGAGCCCGCGAAGCGTaGACAGATCCTCACGTGCGCTTCGGTCGCCAGCCCGGCGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ARTVQSGEALGAREA*TDPHVRFGRQPGGW Trigger: CCACCCGCCGGGCTGGCGACCGAAGCGCACGTGAGGATCTGTCAACGCTTCGCGGGCTCCGAGCGCTTCGCCACTCTGTACAGTCCTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167549.2 ENSMUST00000214236.2 |
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| CDS GCA 72 bp | CCGGGCGCGCAGCGCGAAACGCGGAGAACACGGGGATaGGGTGGCCAGGACTGTACAGAGTGGCGAAGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGAQRETRRTRG*GGQDCTEWRSA Trigger: AGCGCTTCGCCACTCTGTACAGTCCTGGCCACCGCATCCCCGTGTTCTCCGCGTTTCGCGCTGCGCGCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167549.2 ENSMUST00000214236.2 |
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| CDS CAA 90 bp | TGGGGTCCCCTTGTAGAAGAAACGGTCGCATTCGCCGAAGCCCGCTaGCTGCGGGAGCAGCAGCCGGGCCTGCAACAGCCCTGCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WGPLVEETVAFAEAR*LREQQPGLQQPCQG Trigger: GCCCTGGCAGGGCTGTTGCAGGCCCGGCTGCTGCTCCCGCAGCAAGCGGGCTTCGGCGAATGCGACCGTTTCTTCTACAAGGGGACCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167549.2 ENSMUST00000214236.2 |
||
| CDS CCA 72 bp | CGCGCAGCGCGAAACGCGGAGAACACGGGGATGCGGTaGCCAGGACTGTACAGAGTGGCGAAGCGCTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RAARNAENTGMR*PGLYRVAKRSE Trigger: CTCCGAGCGCTTCGCCACTCTGTACAGTCCTGGCCACCGCATCCCCGTGTTCTCCGCGTTTCGCGCTGCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167549.2 ENSMUST00000214236.2 |
||
| CDS TCA 72 bp | TACAGAGTGGCGAAGCGCTCGGAGCCCGCGAAGCGTTaGCAGATCCTCACGTGCGCTTCGGTCGCCAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: YRVAKRSEPAKR*QILTCASVASP Trigger: CGGGCTGGCGACCGAAGCGCACGTGAGGATCTGTCAACGCTTCGCGGGCTCCGAGCGCTTCGCCACTCTGTA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167549.2 ENSMUST00000214236.2 |
||
| CDS CAA 72 bp | GTACAGAGTGGCGAAGCGCTCGGAGCCCGCGAAGCGTaGACAGATCCTCACGTGCGCTTCGGTCGCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VQSGEALGAREA*TDPHVRFGRQP Trigger: GGGCTGGCGACCGAAGCGCACGTGAGGATCTGTCAACGCTTCGCGGGCTCCGAGCGCTTCGCCACTCTGTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167549.2 ENSMUST00000214236.2 |
||
| CDS CAA 72 bp | CTTGTAGAAGAAACGGTCGCATTCGCCGAAGCCCGCTaGCTGCGGGAGCAGCAGCCGGGCCTGCAACAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LVEETVAFAEAR*LREQQPGLQQP Trigger: GGGCTGTTGCAGGCCCGGCTGCTGCTCCCGCAGCAAGCGGGCTTCGGCGAATGCGACCGTTTCTTCTACAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167549.2 ENSMUST00000214236.2 |
||
| CDS CCA 72 bp | AGAACACGGGGATGCGGTGGCCAGGACTGTACAGAGTaGCGAAGCGCTCGGAGCCCGCGAAGCGTTGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: RTRGCGGQDCTE*RSARSPRSVDR Trigger: TCTGTCAACGCTTCGCGGGCTCCGAGCGCTTCGCCACTCTGTACAGTCCTGGCCACCGCATCCCCGTGTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167549.2 ENSMUST00000214236.2 |
||
| CDS CAA 90 bp | TCCACTGAGGTGAGAGCGTTGGCCTCGTCAATGACCTCCTCGAGGTaGCTGTCAGGGTCATCAATCTGCGGCTCCAGCAGCCCGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: STEVRALASSMTSSR*LSGSSICGSSSPRC Trigger: GCAGCGCGGGCTGCTGGAGCCGCAGATTGATGACCCTGACAGCAACCTCGAGGAGGTCATTGACGAGGCCAACGCTCTCACCTCAGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CCA 72 bp | CTGGGGACAGCAGGGCAGACCTCTGGCTTTGGGTGCTaGCGAGGGGACTCATTCTCTCTTGAGACTGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LGTAGQTSGFGC*RGDSFSLETAE Trigger: CTCTGCAGTCTCAAGAGAGAATGAGTCCCCTCGCCAGCACCCAAAGCCAGAGGTCTGCCCTGCTGTCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CCA 72 bp | TCCCAGAAAACTGCTCCCTCCCTCTGGTGGTGCTTCTaGGGACAGCAGGGCAGACCTCTGGCTTTGGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SQKTAPSLWWCF*GQQGRPLALGA Trigger: AGCACCCAAAGCCAGAGGTCTGCCCTGCTGTCCCCAGAAGCACCACCAGAGGGAGGGAGCAGTTTTCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS GCA 72 bp | GACTTGTCCCAGAAAACTGCTCCCTCCCTCTGGTGGTaGTTCTGGGGACAGCAGGGCAGACCTCTGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: DLSQKTAPSLWW*FWGQQGRPLAL Trigger: CAAAGCCAGAGGTCTGCCCTGCTGTCCCCAGAAGCACCACCAGAGGGAGGGAGCAGTTTTCTGGGACAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 72 bp | GTGAGAGCGTTGGCCTCGTCAATGACCTCCTCGAGGTaGCTGTCAGGGTCATCAATCTGCGGCTCCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: VRALASSMTSSR*LSGSSICGSSS Trigger: GCTGCTGGAGCCGCAGATTGATGACCCTGACAGCAACCTCGAGGAGGTCATTGACGAGGCCAACGCTCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 90 bp | GGCAGACCTCTGGCTTTGGGTGCTGGCGAGGGGACTCATTCTCTCTaGAGACTGCAGAGACCGCTCCTCATCTTGGACTTGGTTGACCAC | + |
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Preference number: 6 (lower is better) Translates to: GRPLALGAGEGTHSL*RLQRPLLILDLVDH Trigger: GTGGTCAACCAAGTCCAAGATGAGGAGCGGTCTCTGCAGTCTCAAGAGAGAATGAGTCCCCTCGCCAGCACCCAAAGCCAGAGGTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 90 bp | CAGCAGAGGATCCGGAGGAAGGCCCGGATGACTTTGGCCACAACCTaGAGCACTTTCCAGGGAATGCTCACCAGCTCTTGTCCAATGGCC | + |
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Preference number: 6 (lower is better) Translates to: QQRIRRKARMTLATT*STFQGMLTSSCPMA Trigger: GGCCATTGGACAAGAGCTGGTGAGCATTCCCTGGAAAGTGCTCAAGGTTGTGGCCAAAGTCATCCGGGCCTTCCTCCGGATCCTCTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 90 bp | GCCTTCAGCAGACAGCAGAGGATCCGGAGGAAGGCCCGGATGACTTaGGCCACAACCTTGAGCACTTTCCAGGGAATGCTCACCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: AFSRQQRIRRKARMT*ATTLSTFQGMLTSS Trigger: AGAGCTGGTGAGCATTCCCTGGAAAGTGCTCAAGGTTGTGGCCAAAGTCATCCGGGCCTTCCTCCGGATCCTCTGCTGTCTGCTGAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS GCA 72 bp | GGAAAGTGGCTACATCCACAAGGACTCGGAGAGGGATaGTCAGAGCTCGGCAGACAGCCTTCAGCAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: GKWLHPQGLGEG*SELGRQPSADS Trigger: GCTGTCTGCTGAAGGCTGTCTGCCGAGCTCTGAGCATCCCTCTCCGAGTCCTTGTGGATGTAGCCACTTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CCA 72 bp | TGCCACCCAGGCCCACAGCAATGTCCTTGCACACAATaGGAATGGCCCCCACAGTATACACAGGGAAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: CHPGPQQCPCTQ*EWPPQYTQGKW Trigger: CCACTTTCCCTGTGTATACTGTGGGGGCCATTCCCATTGTGTGCAAGGACATTGCTGTGGGCCTGGGTGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 72 bp | CTGGCTTTGGGTGCTGGCGAGGGGACTCATTCTCTCTaGAGACTGCAGAGACCGCTCCTCATCTTGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: LALGAGEGTHSL*RLQRPLLILDL Trigger: CAAGTCCAAGATGAGGAGCGGTCTCTGCAGTCTCAAGAGAGAATGAGTCCCCTCGCCAGCACCCAAAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 72 bp | AGACAGCAGAGGATCCGGAGGAAGGCCCGGATGACTTaGGCCACAACCTTGAGCACTTTCCAGGGAATGCTC | + |
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Preference number: 6 (lower is better) Translates to: RQQRIRRKARMT*ATTLSTFQGML Trigger: GAGCATTCCCTGGAAAGTGCTCAAGGTTGTGGCCAAAGTCATCCGGGCCTTCCTCCGGATCCTCTGCTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 72 bp | AGTGAGAGGGTGCCACCCAGGCCCACAGCAATGTCCTaGCACACAATGGGAATGGCCCCCACAGTATACACA | + |
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Preference number: 6 (lower is better) Translates to: SERVPPRPTAMS*HTMGMAPTVYT Trigger: TGTGTATACTGTGGGGGCCATTCCCATTGTGTGCAAGGACATTGCTGTGGGCCTGGGTGGCACCCTCTCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 72 bp | TGCTTGCTTCCCAGATTGTCCACTGAGGTGAGAGCGTaGGCCTCGTCAATGACCTCCTCGAGGTTGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: CLLPRLSTEVRA*ASSMTSSRLLS Trigger: TGACAGCAACCTCGAGGAGGTCATTGACGAGGCCAACGCTCTCACCTCAGTGGACAATCTGGGAAGCAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 72 bp | CTGCAGTGTGGGATCAAGGCTCGGTCCATGAGGCTGTaGAGATTCATGTGCCATCGTTCCCGGAAAGACTGG | + |
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Preference number: 6 (lower is better) Translates to: LQCGIKARSMRL*RFMCHRSRKDW Trigger: CCAGTCTTTCCGGGAACGATGGCACATGAATCTCAACAGCCTCATGGACCGAGCCTTGATCCCACACTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 72 bp | CAAGCTGCCAGCCAGACGAATTCAGGGATAGTCACTTaGCCCTTAACTCTGTGCTCTGAGGGAACAGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: QAASQTNSGIVT*PLTLCSEGTAP Trigger: GGGGGCTGTTCCCTCAGAGCACAGAGTTAAGGGCAAAGTGACTATCCCTGAATTCGTCTGGCTGGCAGCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 72 bp | ATCCGGAGGAAGGCCCGGATGACTTTGGCCACAACCTaGAGCACTTTCCAGGGAATGCTCACCAGCTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: IRRKARMTLATT*STFQGMLTSSC Trigger: ACAAGAGCTGGTGAGCATTCCCTGGAAAGTGCTCAAGGTTGTGGCCAAAGTCATCCGGGCCTTCCTCCGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 90 bp | ACTGCACAGCAAGCTGCCAGCCAGACGAATTCAGGGATAGTCACTTaGCCCTTAACTCTGTGCTCTGAGGGAACAGCCCCCGTGAGGATA | + |
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Preference number: 6 (lower is better) Translates to: TAQQAASQTNSGIVT*PLTLCSEGTAPVRI Trigger: TATCCTCACGGGGGCTGTTCCCTCAGAGCACAGAGTTAAGGGCAAAGTGACTATCCCTGAATTCGTCTGGCTGGCAGCTTGCTGTGCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CCA 72 bp | GCACTTTCCAGGGAATGCTCACCAGCTCTTGTCCAATaGCCACGAGGTATGAGACAGTGGCTTCGCCTAGAT | + |
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Preference number: 6 (lower is better) Translates to: ALSRECSPALVQ*PRGMRQWLRLD Trigger: ATCTAGGCGAAGCCACTGTCTCATACCTCGTGGCCATTGGACAAGAGCTGGTGAGCATTCCCTGGAAAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CCA 72 bp | CAATGGGAATGGCCCCCACAGTATACACAGGGAAAGTaGCTACATCCACAAGGACTCGGAGAGGGATGCTCA | + |
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Preference number: 6 (lower is better) Translates to: QWEWPPQYTQGK*LHPQGLGEGCS Trigger: TGAGCATCCCTCTCCGAGTCCTTGTGGATGTAGCCACTTTCCCTGTGTATACTGTGGGGGCCATTCCCATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CCA 72 bp | CCAGGCCCACAGCAATGTCCTTGCACACAATGGGAATaGCCCCCACAGTATACACAGGGAAAGTGGCTACAT | + |
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Preference number: 6 (lower is better) Translates to: PGPQQCPCTQWE*PPQYTQGKWLH Trigger: ATGTAGCCACTTTCCCTGTGTATACTGTGGGGGCCATTCCCATTGTGTGCAAGGACATTGCTGTGGGCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 90 bp | TTGCCTTCACTGCAGTGTGGGATCAAGGCTCGGTCCATGAGGCTGTaGAGATTCATGTGCCATCGTTCCCGGAAAGACTGGGTCATTGGA | + |
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Preference number: 6 (lower is better) Translates to: LPSLQCGIKARSMRL*RFMCHRSRKDWVIG Trigger: TCCAATGACCCAGTCTTTCCGGGAACGATGGCACATGAATCTCAACAGCCTCATGGACCGAGCCTTGATCCCACACTGCAGTGAAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CCA 72 bp | ATGGCCACGAGGTATGAGACAGTGGCTTCGCCTAGATaGTATAGGCAACTCTCAACAGTGTTTATTGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: MATRYETVASPR*YRQLSTVFIAC Trigger: GCAGGCAATAAACACTGTTGAGAGTTGCCTATACCATCTAGGCGAAGCCACTGTCTCATACCTCGTGGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS TCA 72 bp | GAGACTGCAGAGACCGCTCCTCATCTTGGACTTGGTTaGCCACTTCCAGAATCTTCTTCATCTTCTCTGTAT | + |
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Preference number: 6 (lower is better) Translates to: ETAETAPHLGLG*PLPESSSSSLY Trigger: ATACAGAGAAGATGAAGAAGATTCTGGAAGTGGTCAACCAAGTCCAAGATGAGGAGCGGTCTCTGCAGTCTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 90 bp | GACTTGGTTGACCACTTCCAGAATCTTCTTCATCTTCTCTGTATCTaGCTCCATCTCACCACAGTTGTCCTGGAACAGTTGAGGCTTATG | + |
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Preference number: 6 (lower is better) Translates to: DLVDHFQNLLHLLCI*LHLTTVVLEQLRLM Trigger: CATAAGCCTCAACTGTTCCAGGACAACTGTGGTGAGATGGAGCAAGATACAGAGAAGATGAAGAAGATTCTGGAAGTGGTCAACCAAGTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CAA 90 bp | ACTCATTCTCTCTTGAGACTGCAGAGACCGCTCCTCATCTTGGACTaGGTTGACCACTTCCAGAATCTTCTTCATCTTCTCTGTATCTTG | + |
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Preference number: 6 (lower is better) Translates to: THSLLRLQRPLLILD*VDHFQNLLHLLCIL Trigger: CAAGATACAGAGAAGATGAAGAAGATTCTGGAAGTGGTCAACCAAGTCCAAGATGAGGAGCGGTCTCTGCAGTCTCAAGAGAGAATGAGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CCA 72 bp | GAATGTGGCCATCTGGAGGTCACTGTTAAGAGGAAATaGGTACAGCTGTCCGATTTCATAGTCAGAGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: ECGHLEVTVKRK*VQLSDFIVRVN Trigger: ATTGACTCTGACTATGAAATCGGACAGCTGTACCCATTTCCTCTTAACAGTGACCTCCAGATGGCCACATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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| CDS CCA 72 bp | GGTATAGGCAACTCTCAACAGTGTTTATTGCCTGCTTaGCAACCAACCAAAGGAGATGGACTATATTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: GIGNSQQCLLPA*QPTKGDGLYSL Trigger: TAAGGAATATAGTCCATCTCCTTTGGTTGGTTGCCAAGCAGGCAATAAACACTGTTGAGAGTTGCCTATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167549.2 |
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