Pregenerated sensors for EN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039095Ensembl transcript IDs: ENSMUST00000036177.9
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAAGCCTTCAGGACACACTCCCACTGCTCCCCAGGCCCCAACGCTaGCCACGGTGGCGGGAGAGTTGGCGCTGGCAGGTCGCTACGGGG | + |
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Preference number: 1 (lower is better) Translates to: SSLQDTLPLLPRPQR*PRWRESWRWQVATG Trigger: CCCCGTAGCGACCTGCCAGCGCCAACTCTCCCGCCACCGTGGCCAGCGTTGGGGCCTGGGGAGCAGTGGGAGTGTGTCCTGAAGGCTTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR CCA 90 bp | ACTGCGCCCTCTCTCCCCACCAGAGCTCTCCATCACCACTCTGGCTaGCGCTTCCTACAGTGCTGTCCGAGCCAGCACAAAGCAAGCGGC | + |
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Preference number: 1 (lower is better) Translates to: TAPSLPTRALHHHSG*RFLQCCPSQHKASG Trigger: GCCGCTTGCTTTGTGCTGGCTCGGACAGCACTGTAGGAAGCGCCAGCCAGAGTGGTGATGGAGAGCTCTGGTGGGGAGAGAGGGCGCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR CCA 90 bp | AAGAACTGCGCCCTCTCTCCCCACCAGAGCTCTCCATCACCACTCTaGCTGGCGCTTCCTACAGTGCTGTCCGAGCCAGCACAAAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: KNCALSPHQSSPSPL*LALPTVLSEPAQSK Trigger: CTTGCTTTGTGCTGGCTCGGACAGCACTGTAGGAAGCGCCAGCCAGAGTGGTGATGGAGAGCTCTGGTGGGGAGAGAGGGCGCAGTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR GCA 90 bp | AGAGCTGCTGGCCTGCAAGGACTTTCTCAGACCTCAGCAAAGAACTaGGCCCTCTCTCCCCACCAGAGCTCTCCATCACCACTCTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: RAAGLQGLSQTSAKN*ALSPHQSSPSPLWL Trigger: CAGCCAGAGTGGTGATGGAGAGCTCTGGTGGGGAGAGAGGGCGCAGTTCTTTGCTGAGGTCTGAGAAAGTCCTTGCAGGCCAGCAGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR CCA 90 bp | AGAGAAATCCACCATCGGTCCTCAGCAGGCAGCCTGAGAACACGCTaGCCACTGTGCTGGCCCCAGGTGGATGTTTGGACACCTTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: REIHHRSSAGSLRTR*PLCWPQVDVWTPFP Trigger: GGGAAAAGGTGTCCAAACATCCACCTGGGGCCAGCACAGTGGCCAGCGTGTTCTCAGGCTGCCTGCTGAGGACCGATGGTGGATTTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR GCA 90 bp | CATCGGTCCTCAGCAGGCAGCCTGAGAACACGCTGGCCACTGTGCTGGCCCCAGACCTCAGCAAAGAACTaGGCCCTCTCTCCCCACCAG | + |
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Preference number: 2 (lower is better) Translates to: HRSSAGSLRTRWPLCWPQTSAKN*ALSPHQ Trigger: CTGGTGGGGAGAGAGGGCGCAGTTCTTTGCTGAGGT...CTGGGGCCAGCACAGTGGCCAGCGTGTTCTCAGGCTGCCTGCTGAGGACCGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR GCA 90 bp | CATCGGTCCTCAGCAGGCAGCCTGAGAACACGCTGGCCACTGTGCTGGCCCCAGGTTGAGAAGAGAGGCTaGGTAGGAAGCAGGCGGAGA | + |
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Preference number: 2 (lower is better) Translates to: HRSSAGSLRTRWPLCWPQVEKRG*VGSRRR Trigger: TCTCCGCCTGCTTCCTACGCAGCCTCTCTTCTCAAC...CTGGGGCCAGCACAGTGGCCAGCGTGTTCTCAGGCTGCCTGCTGAGGACCGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR GCA 90 bp | GAAGATGATTCCAACTCGCTCTGCCAGGCCCCAAGGCCTATCTCGGTGAGGGCTAGGTTCCGGGAGAGCTaGTGGCCTGCAAGGACTTTC | + |
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Preference number: 2 (lower is better) Translates to: EDDSNSLCQAPRPISVRARFRES*WPARTF Trigger: GAAAGTCCTTGCAGGCCAGCAGCTCTCCCGGAACCT...AGCCCTCACCGAGATAGGCCTTGGGGCCTGGCAGAGCGAGTTGGAATCATCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTAAAAGGCATGTGTTCCACCGACCCCCAAGCAGCAGATGGTTATTCACAGACGCAGACACACGGTaGCTGCCAGCACGGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: PAKRHVFHRPPSSRWLFTDADTR*LPARAS Trigger: AGAGGCCCGTGCTGGCAGCCACCGTGTGTCTGCGTC...TGTGAATAACCATCTGCTGCTTGGGGGTCGGTGGAACACATGCCTTTTAGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR GCA 90 bp | GAAGAAAAAGGAAAGGAAGATGATTCCAACTCGCTCTGCCAGGCCCCAAGGCCTAGGACACACTCCCACTaGTCCCCAGGCCCCAACGCT | + |
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Preference number: 2 (lower is better) Translates to: EEKGKEDDSNSLCQAPRPRTHSH*SPGPNA Trigger: AGCGTTGGGGCCTGGGGAGCAGTGGGAGTGTGTCCT...AGGCCTTGGGGCCTGGCAGAGCGAGTTGGAATCATCTTCCTTTCCTTTTTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR GCA 90 bp | GCCACTGTGCTGGCCCCAGGTGGATGTTTGGACACCTTTTCCCATACACTAAACGGAGAGCTGCTGGCCTaGAAGGACTTTCTCAGACCT | + |
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Preference number: 2 (lower is better) Translates to: ATVLAPGGCLDTFSHTLNGELLA*KDFLRP Trigger: AGGTCTGAGAAAGTCCTTGCAGGCCAGCAGCTCTCC...GTTTAGTGTATGGGAAAAGGTGTCCAAACATCCACCTGGGGCCAGCACAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGATTCGAGTTCCTTTGAAAGTCAAGGTAGCTGTGAGCTCCAGAACCCCAGCCATCACCACTCTGGCTaGCGCTTCCTACAGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: EDSSSFESQGSCELQNPSHHHSG*RFLQCC Trigger: ACAGCACTGTAGGAAGCGCCAGCCAGAGTGGTGATG...GCTGGGGTTCTGGAGCTCACAGCTACCTTGACTTTCAAAGGAACTCGAATCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR TCA 90 bp | CTCGGTGAGGGCTTTTGGGTCAGGGCTAGCTGTCCCGGCAGCAAAGCCTTCAAGAATGAAAGAAAGATCTaGAACCCTAAACAGTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LGEGFWVRASCPGSKAFKNERKI*NPKQSP Trigger: AGGGGACTGTTTAGGGTTTCAGATCTTTCTTTCATT...CTTGAAGGCTTTGCTGCCGGGACAGCTAGCCCTGACCCAAAAGCCCTCACCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTAAAAGGCATGTGTTCCACCGACCCCCAAGCAGCAGATGGTTATTCACAGGCCTGGGGTGTGCGTaGACATGCATACACAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: PAKRHVFHRPPSSRWLFTGLGCA*TCIHKY Trigger: ATACTTGTGTATGCATGTGCACGCACACCCCAGGCC...TGTGAATAACCATCTGCTGCTTGGGGGTCGGTGGAACACATGCCTTTTAGCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR TCA 90 bp | GAAGAAAAAGGAAAGGAAGATGATTCCAACTCGCTCTGCCAGGCCCCAAGGCCTCGGTTCACAGTCCTGTaGAATGCAGCAATAAAAATC | + |
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Preference number: 2 (lower is better) Translates to: EEKGKEDDSNSLCQAPRPRFTVL*NAAIKI Trigger: GATTTTTATTGCTGCATTTCACAGGACTGTGAACCG...AGGCCTTGGGGCCTGGCAGAGCGAGTTGGAATCATCTTCCTTTCCTTTTTCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR TCA 90 bp | ACCCCCAAGCAGCAGATGGTTATTCACAGACTCTTAAATTACAACTTCTGTTTTCAAGGCCTATCTCGGTaGGGGCTTTTGGGTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: TPKQQMVIHRLLNYNFCFQGLSR*GLLGQG Trigger: GCCCTGACCCAAAAGCCCTCACCGAGATAGGCCTTG...AAAACAGAAGTTGTAATTTAAGAGTCTGTGAATAACCATCTGCTGCTTGGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR CAA 90 bp | GATTATTTACACATGTCCTCTAGATTCGGGAGGATTCGAGTTCCTTaGAAAGTCAAGGTAGCTGTGAGCTCCAGAACCCCAGCTTCACAC | + |
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Preference number: 2 (lower is better) Translates to: DYLHMSSRFGRIRVP*KVKVAVSSRTPASH Trigger: GTGTGAAGCTGGGGTTCTGGAGCTCACAGCTACCTTGACTTTCAAAGGAACTCGAATCCTCCCGAATCTAGAGGACATGTGTAAATAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTTTTTATAGCTTCCTTTTCAGAAGGTTGGCACGAATATGTACAAAGAGACACGGGCCTCTGAGATaGTTGAGAAGAGAGGCTGCG | + |
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Preference number: 2 (lower is better) Translates to: FCFYSFLFRRLARICTKRHGPLR*LRREAA Trigger: CGCAGCCTCTCTTCTCAACCATCTCAGAGGCCCGTG...TCTCTTTGTACATATTCGTGCCAACCTTCTGAAAAGGAAGCTATAAAAACAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTTTTTATAGCTTCCTTTTCAGAAGGTTGGCACGAATATGTACAAAGAGACACAGGCCTGGGGTGTaGGTGCACATGCATACACAA | + |
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Preference number: 2 (lower is better) Translates to: FCFYSFLFRRLARICTKRHRPGV*VHMHTQ Trigger: TTGTGTATGCATGTGCACGCACACCCCAGGCCTGTG...TCTCTTTGTACATATTCGTGCCAACCTTCTGAAAAGGAAGCTATAAAAACAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGTTGGCACGAATATGTACAAAGAGAAAGTGTTGGCGCAGTGAAATAAAGAAAAGGAAAGGAAGATaGTTCCAACTCGCTCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: RRLARICTKRKCWRSEIKKRKGR*FQLALP Trigger: TGGCAGAGCGAGTTGGAATCATCTTCCTTTCCTTTT...CTTTATTTCACTGCGCCAACACTTTCTCTTTGTACATATTCGTGCCAACCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR CCA 72 bp | CTCCCACTGCTCCCCAGGCCCCAACGCTGGCCACGGTaGCGGGAGAGTTGGCGCTGGCAGGTCGCTACGGGG | + |
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Preference number: 3 (lower is better) Translates to: LPLLPRPQRWPR*RESWRWQVATG Trigger: CCCCGTAGCGACCTGCCAGCGCCAACTCTCCCGCCACCGTGGCCAGCGTTGGGGCCTGGGGAGCAGTGGGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR CCA 72 bp | CAGGACACACTCCCACTGCTCCCCAGGCCCCAACGCTaGCCACGGTGGCGGGAGAGTTGGCGCTGGCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: QDTLPLLPRPQR*PRWRESWRWQV Trigger: GACCTGCCAGCGCCAACTCTCCCGCCACCGTGGCCAGCGTTGGGGCCTGGGGAGCAGTGGGAGTGTGTCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR CCA 72 bp | CGGGAGAGTTGGCGCTGGCAGGTCGCTACGGGGCTGTaGCGGACAGGGGTCATCGACACAGACGCAGACACA | + |
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Preference number: 3 (lower is better) Translates to: RESWRWQVATGL*RTGVIDTDADT Trigger: TGTGTCTGCGTCTGTGTCGATGACCCCTGTCCGCCACAGCCCCGTAGCGACCTGCCAGCGCCAACTCTCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR CCA 72 bp | GCCCTCTCTCCCCACCAGAGCTCTCCATCACCACTCTaGCTGGCGCTTCCTACAGTGCTGTCCGAGCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: ALSPHQSSPSPL*LALPTVLSEPA Trigger: TGCTGGCTCGGACAGCACTGTAGGAAGCGCCAGCCAGAGTGGTGATGGAGAGCTCTGGTGGGGAGAGAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR CCA 72 bp | CTGCCAGGCCCCAAGGCCTATCTCGGTGAGGGCTTTTaGGTCAGGGCTAGCTGTCCCGGCAGCAAAGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: LPGPKAYLGEGF*VRASCPGSKAF Trigger: GAAGGCTTTGCTGCCGGGACAGCTAGCCCTGACCCAAAAGCCCTCACCGAGATAGGCCTTGGGGCCTGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR TCA 72 bp | AGAGAGAAATCCACCATCGGTCCTCAGCAGGCAGCCTaGGAACACGCTGGCCACTGTGCTGGCCCCAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: REKSTIGPQQAA*EHAGHCAGPRW Trigger: CCACCTGGGGCCAGCACAGTGGCCAGCGTGTTCTCAGGCTGCCTGCTGAGGACCGATGGTGGATTTCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR CCA 72 bp | CGGACAGGGGTCATCGACACAGACGCAGACACACGGTaGCTGCCAGCACGGGCCTCTGAGATGGTTGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: RTGVIDTDADTR*LPARASEMVEK Trigger: CTTCTCAACCATCTCAGAGGCCCGTGCTGGCAGCCACCGTGTGTCTGCGTCTGTGTCGATGACCCCTGTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR GCA 72 bp | TCCTCAGCAGGCAGCCTGAGAACACGCTGGCCACTGTaGTGGCCCCAGGTGGATGTTTGGACACCTTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: SSAGSLRTRWPL*WPQVDVWTPFP Trigger: GGGAAAAGGTGTCCAAACATCCACCTGGGGCCAGCACAGTGGCCAGCGTGTTCTCAGGCTGCCTGCTGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR GCA 72 bp | GAAGCAGGCGGAGAGGTTCCGGGAGAGCTGCTGGCCTaGAAGGACTTTCTCAGACCTCAGCAAAGAACTGCG | + |
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Preference number: 3 (lower is better) Translates to: EAGGEVPGELLA*KDFLRPQQRTA Trigger: CGCAGTTCTTTGCTGAGGTCTGAGAAAGTCCTTGCAGGCCAGCAGCTCTCCCGGAACCTCTCCGCCTGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR GCA 72 bp | CTGCGTAGGAAGCAGGCGGAGAGGTTCCGGGAGAGCTaGTGGCCTGCAAGGACTTTCTCAGACCTCAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: LRRKQAERFRES*WPARTFSDLSK Trigger: TTTGCTGAGGTCTGAGAAAGTCCTTGCAGGCCAGCAGCTCTCCCGGAACCTCTCCGCCTGCTTCCTACGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR GCA 72 bp | GGCCTGCAAGGACTTTCTCAGACCTCAGCAAAGAACTaGGCCCTCTCTCCCCACCAGAGCTCTCCATCACCA | + |
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Preference number: 3 (lower is better) Translates to: GLQGLSQTSAKN*ALSPHQSSPSP Trigger: TGGTGATGGAGAGCTCTGGTGGGGAGAGAGGGCGCAGTTCTTTGCTGAGGTCTGAGAAAGTCCTTGCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR GCA 72 bp | GAAGAAAAAGGAAAGGAAGATGATTCCAACTCGCTCTaGCAGGCCCCAAGGCCTATCTCGGTGAGGGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: EEKGKEDDSNSL*QAPRPISVRAF Trigger: AAAAGCCCTCACCGAGATAGGCCTTGGGGCCTGGCAGAGCGAGTTGGAATCATCTTCCTTTCCTTTTTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR CAA 90 bp | CCTGCTAAAAGGCATGTGTTCCACCGACCCCCAAGCAGCAGATGGTTATTCACATTCCTTTTCAGAAGGTaGGCACGAATATGTACAAAG | + |
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Preference number: 3 (lower is better) Translates to: PAKRHVFHRPPSSRWLFTFLFRR*ARICTK Trigger: CTTTGTACATATTCGTGCCAACCTTCTGAAAAGGAA...TGTGAATAACCATCTGCTGCTTGGGGGTCGGTGGAACACATGCCTTTTAGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR CAA 90 bp | TTCTGTTTTTATAGCTTCCTTTTCAGAAGGTTGGCACGAATATGTACAAAGAGAGCCCCAGGTGGATGTTaGGACACCTTTTCCCATACA | + |
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Preference number: 3 (lower is better) Translates to: FCFYSFLFRRLARICTKRAPGGC*DTFSHT Trigger: TGTATGGGAAAAGGTGTCCAAACATCCACCTGGGGC...TCTCTTTGTACATATTCGTGCCAACCTTCTGAAAAGGAAGCTATAAAAACAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR-3UTR CAA 90 bp | ACCCCCAAGCAGCAGATGGTTATTCACAGACTCTTAAATTACAACTTCTGTTTTTTTAAAATTATTGCATaGTTTCTCGCGGCCCTAGAC | + |
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Preference number: 3 (lower is better) Translates to: TPKQQMVIHRLLNYNFCFFKIIA*FLAALD Trigger: GTCTAGGGCCGCGAGAAACAATGCAATAATTTTAAA...AAAACAGAAGTTGTAATTTAAGAGTCTGTGAATAACCATCTGCTGCTTGGGGGT 39% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR CCA 72 bp | ACAACTTCTGTTTTTATAGCTTCCTTTTCAGAAGGTTaGCACGAATATGTACAAAGAGAAAGTGTTGGCGCA | + |
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Preference number: 3 (lower is better) Translates to: TTSVFIASFSEG*HEYVQRESVGA Trigger: TGCGCCAACACTTTCTCTTTGTACATATTCGTGCCAACCTTCTGAAAAGGAAGCTATAAAAACAGAAGTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CCA 90 bp | TCCCACTGCTCCCCAGGCCCCAACGCTGGCCACGGTGGCGGGAGAGTTGGCGCTCGCCCAGAGTGGCGCTaGCTTGAGAGCTGTCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: SHCSPGPNAGHGGGRVGARPEWR*LESCPS Trigger: ACTCGGACAGCTCTCAAGCCAGCGCCACTCTGGGCG...AGCGCCAACTCTCCCGCCACCGTGGCCAGCGTTGGGGCCTGGGGAGCAGTGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR TCA 90 bp | CATCGGTCCTCAGCAGGCAGCCTGAGAACACGCTGGCCACTGTGCTGGCCCCAGAGAGTGGCGCTGGCTTaGGAGCTGTCCGAGTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: HRSSAGSLRTRWPLCWPQRVALA*ELSESE Trigger: CTCCGACTCGGACAGCTCTCAAGCCAGCGCCACTCT...CTGGGGCCAGCACAGTGGCCAGCGTGTTCTCAGGCTGCCTGCTGAGGACCGATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR GCA 90 bp | TCCCACTGCTCCCCAGGCCCCAACGCTGGCCACGGTGGCGGGAGAGTTGGCGCTCCCTGTGCCATGAGGTaGACCGCCAAAGTGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SHCSPGPNAGHGGGRVGAPCAMR*TAKVFL Trigger: CAAGAACACTTTGGCGGTGCACCTCATGGCACAGGG...AGCGCCAACTCTCCCGCCACCGTGGCCAGCGTTGGGGCCTGGGGAGCAGTGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR GCA 90 bp | CTCGGTGAGGGCTTTTGGGTCAGGGCTAGCTGTCCCGGCAGCAAAGCCTTCAAGCAGGCTGAGCTCCTGTaGCAGACTCTGGCGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: LGEGFWVRASCPGSKAFKQAELL*QTLAPL Trigger: CAGCGGCGCCAGAGTCTGGCACAGGAGCTCAGCCTG...CTTGAAGGCTTTGCTGCCGGGACAGCTAGCCCTGACCCAAAAGCCCTCACCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CCA 90 bp | GAAGATGATTCCAACTCGCTCTGCCAGGCCCCAAGGCCTATCTCGGTGAGGGCTAAGCGGGCCAGAGCATaGGCTGCGCGCCCAGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: EDDSNSLCQAPRPISVRAKRARA*AARPEW Trigger: CCACTCTGGGCGCGCAGCCCATGCTCTGGCCCGCTT...AGCCCTCACCGAGATAGGCCTTGGGGCCTGGCAGAGCGAGTTGGAATCATCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CCA 90 bp | TCCCACTGCTCCCCAGGCCCCAACGCTGGCCACGGTGGCGGGAGAGTTGGCGCTAGGGTTCTTCTTCTTTaGTTTTCGGGACCTGGGACC | + |
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Preference number: 4 (lower is better) Translates to: SHCSPGPNAGHGGGRVGARVLLL*FSGPGT Trigger: GGTCCCAGGTCCCGAAAACCAAAGAAGAAGAACCCT...AGCGCCAACTCTCCCGCCACCGTGGCCAGCGTTGGGGCCTGGGGAGCAGTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CCA 90 bp | GAAGATGATTCCAACTCGCTCTGCCAGGCCCCAAGGCCTATCTCGGTGAGGGCTGCTGCGCGCCCAGAGTaGCGCTGGCTTGAGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: EDDSNSLCQAPRPISVRAAARPE*RWLESC Trigger: ACAGCTCTCAAGCCAGCGCCACTCTGGGCGCGCAGC...AGCCCTCACCGAGATAGGCCTTGGGGCCTGGCAGAGCGAGTTGGAATCATCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CCA 90 bp | TCTCCCCACCAGAGCTCTCCATCACCACTCTGGCTGGCGCTTCCTACAGTGCTGTCCTGTGCCAGACTCTaGCGCCGCTGCTCTGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SPHQSSPSPLWLALPTVLSCARL*RRCSVR Trigger: CCTGACAGAGCAGCGGCGCCAGAGTCTGGCACAGGA...CAGCACTGTAGGAAGCGCCAGCCAGAGTGGTGATGGAGAGCTCTGGTGGGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR GCA 90 bp | GCCACTGTGCTGGCCCCAGGTGGATGTTTGGACACCTTTTCCCATACACTAAACGGCCAGAGCATGGGCTaGGCGCCCAGAGTGGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: ATVLAPGGCLDTFSHTLNGQSMG*APRVAL Trigger: CAGCGCCACTCTGGGCGCGCAGCCCATGCTCTGGCC...GTTTAGTGTATGGGAAAAGGTGTCCAAACATCCACCTGGGGCCAGCACAGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CCA 90 bp | GAAGATGATTCCAACTCGCTCTGCCAGGCCCCAAGGCCTATCTCGGTGAGGGCTCGATGTGGATGCTGGTaGTTGCCTGGCGCCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: EDDSNSLCQAPRPISVRARCGCW*LPGACR Trigger: CCTACAGGCGCCAGGCAACCACCAGCATCCACATCG...AGCCCTCACCGAGATAGGCCTTGGGGCCTGGCAGAGCGAGTTGGAATCATCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR GCA 90 bp | GAAGATGATTCCAACTCGCTCTGCCAGGCCCCAAGGCCTATCTCGGTGAGGGCTAGACTCTGGCGCCGCTaGTCTGTCAGGTACCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: EDDSNSLCQAPRPISVRARLWRR*SVRYLL Trigger: CAACAGGTACCTGACAGAGCAGCGGCGCCAGAGTCT...AGCCCTCACCGAGATAGGCCTTGGGGCCTGGCAGAGCGAGTTGGAATCATCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR TCA 90 bp | TCTCCCCACCAGAGCTCTCCATCACCACTCTGGCTGGCGCTTCCTACAGTGCTGTGCCCGTGGCTTTCTTaGTTTTGGCCCGCTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SPHQSSPSPLWLALPTVLCPWLS*FWPACS Trigger: AGAACAAGCGGGCCAAAATCAAGAAAGCCACGGGCA...CAGCACTGTAGGAAGCGCCAGCCAGAGTGGTGATGGAGAGCTCTGGTGGGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR GCA 90 bp | GCCACTGTGCTGGCCCCAGGTGGATGTTTGGACACCTTTTCCCATACACTAAACACTCGCTGTCCGACTTaGCCTCCTTGGCCGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATVLAPGGCLDTFSHTLNTRCPT*PPWPWW Trigger: CCACCACGGCCAAGGAGGGCAAGTCGGACAGCGAGT...GTTTAGTGTATGGGAAAAGGTGTCCAAACATCCACCTGGGGCCAGCACAGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR TCA 90 bp | GAAGATGATTCCAACTCGCTCTGCCAGGCCCCAAGGCCTATCTCGGTGAGGGCTTTTTTGGCACCACCGTaGAGTGATAGCGTCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EDDSNSLCQAPRPISVRAFLAPP*SDSVLE Trigger: TTCCAAGACGCTATCACTTCACGGTGGTGCCAAAAA...AGCCCTCACCGAGATAGGCCTTGGGGCCTGGCAGAGCGAGTTGGAATCATCTTC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR TCA 90 bp | GAAGATGATTCCAACTCGCTCTGCCAGGCCCCAAGGCCTATCTCGGTGAGGGCTTCTGGAACCAAATCTTaGTCTGAGACTCGTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EDDSNSLCQAPRPISVRASGTKS*SETRSG Trigger: GCCTGAACGAGTCTCAGATCAAGATTTGGTTCCAGA...AGCCCTCACCGAGATAGGCCTTGGGGCCTGGCAGAGCGAGTTGGAATCATCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR GCA 90 bp | AAGGCATGTGTTCCACCGACCCCCAAGCAGCAGATGGTTATTCACAGACTCTTAGTGGATGCTGGTGGTTaGCTGGCGCCTGTAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: KACVPPTPKQQMVIHRLLVDAGG*LAPVGP Trigger: AGGTCCTACAGGCGCCAGGCAACCACCAGCATCCAC...TAAGAGTCTGTGAATAACCATCTGCTGCTTGGGGGTCGGTGGAACACATGCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR GCA 90 bp | ACTGTGCTGGCCCCAGGTGGATGTTTGGACACCTTTTCCCATACACTAAACAGAGTGATGCGATGTGGATaGTGGTGGTTGCCTGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVLAPGGCLDTFSHTLNRVMRCG*WWLPGA Trigger: GGCGCCAGGCAACCACCAGCATCCACATCGCATCAC...TCTGTTTAGTGTATGGGAAAAGGTGTCCAAACATCCACCTGGGGCCAGCACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CCA 90 bp | CCTGCTAAAAGGCATGTGTTCCACCGACCCCCAAGCAGCAGATGGTTATTCACAGTTGGTGATGCGATGTaGATGCTGGTGGTTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAKRHVFHRPPSSRWLFTVGDAM*MLVVAW Trigger: CCAGGCAACCACCAGCATCCACATCGCATCACCAAC...TGTGAATAACCATCTGCTGCTTGGGGGTCGGTGGAACACATGCCTTTTAGCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR TCA 90 bp | GAAGAAAAAGGAAAGGAAGATGATTCCAACTCGCTCTGCCAGGCCCCAAGGCCTAGGTACCTGTTGGTCTaGAACTCAGCCTTGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EEKGKEDDSNSLCQAPRPRYLLV*NSALSL Trigger: GAGGCTCAAGGCTGAGTTTCAGACCAACAGGTACCT...AGGCCTTGGGGCCTGGCAGAGCGAGTTGGAATCATCTTCCTTTCCTTTTTCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR GCA 90 bp | AAGGCATGTGTTCCACCGACCCCCAAGCAGCAGATGGTTATTCACAGACTCTTATTGAGCCTCTGGAGCTaGTCAGCAGTGAAGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KACVPPTPKQQMVIHRLLLSLWS*SAVKAV Trigger: CACAGCCTTCACTGCTGAGCAGCTCCAGAGGCTCAA...TAAGAGTCTGTGAATAACCATCTGCTGCTTGGGGGTCGGTGGAACACATGCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| 3UTR CAA 72 bp | CACATGTCCTCTAGATTCGGGAGGATTCGAGTTCCTTaGAAAGTCAAGGTAGCTGTGAGCTCCAGAACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HMSSRFGRIRVP*KVKVAVSSRTP Trigger: TGGGGTTCTGGAGCTCACAGCTACCTTGACTTTCAAAGGAACTCGAATCCTCCCGAATCTAGAGGACATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR TCA 90 bp | ACTGTGCTGGCCCCAGGTGGATGTTTGGACACCTTTTCCCATACACTAAACAGAAACCAAATCTTGATCTaGGACTCGTTCAGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVLAPGGCLDTFSHTLNRNQILI*DSFRLS Trigger: GCTCAGCCTGAACGAGTCTCAGATCAAGATTTGGTT...TCTGTTTAGTGTATGGGAAAAGGTGTCCAAACATCCACCTGGGGCCAGCACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR TCA 90 bp | AGAAGGTTGGCACGAATATGTACAAAGAGAAAGTGTTGGCGCAGTGAAATAAAGACAGGCCCTGTGCCATaGGGTGCACCGCCAAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRLARICTKRKCWRSEIKTGPVP*GAPPKC Trigger: ACACTTTGGCGGTGCACCTCATGGCACAGGGCCTGT...CTTTATTTCACTGCGCCAACACTTTCTCTTTGTACATATTCGTGCCAACCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CCA 90 bp | TTACACATGTCCTCTAGATTCGGGAGGATTCGAGTTCCTTTGAAAGTCAAGGTACCGACTTGCCCTCCTTaGCCGTGGTGGAATGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHMSSRFGRIRVPLKVKVPTCPP*PWWNGC Trigger: ACAACCATTCCACCACGGCCAAGGAGGGCAAGTCGG...TACCTTGACTTTCAAAGGAACTCGAATCCTCCCGAATCTAGAGGACATGTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS GCA 90 bp | GGTGCGCACGCTGGGTTCGGTCGGGACTCCCTGGCGCCCAGTAGCTaGTCGGCTCCGCCTGCGCCGCCGCCGCCTCCTTCGGTAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GAHAGFGRDSLAPSS*SAPPAPPPPPSVVP Trigger: TGGCACTACCGAAGGAGGCGGCGGCGGCGCAGGCGGAGCCGAGCAGCTACTGGGCGCCAGGGAGTCCCGACCGAACCCAGCGTGCGCACC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS TCA 90 bp | CAAGCGGGCCAGAGCATGGGCTGCGCGCCCAGAGTGGCGCTGGCTTaGGAGCTGTCCGAGTCGGAGCTCACCGACAGGTCACCGCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QAGQSMGCAPRVALA*ELSESELTDRSPPP Trigger: GGGCGGCGGTGACCTGTCGGTGAGCTCCGACTCGGACAGCTCTCAAGCCAGCGCCACTCTGGGCGCGCAGCCCATGCTCTGGCCCGCTTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS CCA 90 bp | TGCAGTAGACCCAAGCGGGCCAGAGCATGGGCTGCGCGCCCAGAGTaGCGCTGGCTTGAGAGCTGTCCGAGTCGGAGCTCACCGACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSRPKRARAWAARPE*RWLESCPSRSSPTG Trigger: ACCTGTCGGTGAGCTCCGACTCGGACAGCTCTCAAGCCAGCGCCACTCTGGGCGCGCAGCCCATGCTCTGGCCCGCTTGGGTCTACTGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS CCA 90 bp | GCCGGTCAGAATAGCGCGTGCAGTAGACCCAAGCGGGCCAGAGCATaGGCTGCGCGCCCAGAGTGGCGCTGGCTTGAGAGCTGTCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AGQNSACSRPKRARA*AARPEWRWLESCPS Trigger: ACTCGGACAGCTCTCAAGCCAGCGCCACTCTGGGCGCGCAGCCCATGCTCTGGCCCGCTTGGGTCTACTGCACGCGCTATTCTGACCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS GCA 90 bp | GTTTTCGGGACCTGGGACCTGAAGAAGGCCGGTCAGAATAGCGCGTaGAGTAGACCCAAGCGGGCCAGAGCATGGGCTGCGCGCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VFGTWDLKKAGQNSA*SRPKRARAWAARPE Trigger: CTCTGGGCGCGCAGCCCATGCTCTGGCCCGCTTGGGTCTACTGCACGCGCTATTCTGACCGGCCTTCTTCAGGTCCCAGGTCCCGAAAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CAA 90 bp | CTCGGTGAGGGCTTTTGGGTCAGGGCTAGCTGTCCCGGCAGCAAAGCCTTCAAGTACTCGCTGTCCGACTaGCCCTCCTTGGCCGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGEGFWVRASCPGSKAFKYSLSD*PSLAVV Trigger: CACCACGGCCAAGGAGGGCAAGTCGGACAGCGAGTA...CTTGAAGGCTTTGCTGCCGGGACAGCTAGCCCTGACCCAAAAGCCCTCACCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CAA 90 bp | GAAGATGATTCCAACTCGCTCTGCCAGGCCCCAAGGCCTATCTCGGTGAGGGCTGCCGTGGTGGAATGGTaGTACAGGCCCTGTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: EDDSNSLCQAPRPISVRAAVVEW*YRPCAM Trigger: CATGGCACAGGGCCTGTACAACCATTCCACCACGGC...AGCCCTCACCGAGATAGGCCTTGGGGCCTGGCAGAGCGAGTTGGAATCATCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS GCA 90 bp | GGCCGCAGGATGTTATCGATGAAGAAGTTGGTGATGCGATGTGGATaGTGGTGGTTGCCTGGCGCCTGTAGGACCTCGGGCAGCATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRRMLSMKKLVMRCG*WWLPGACRTSGSIR Trigger: TCTGATGCTGCCCGAGGTCCTACAGGCGCCAGGCAACCACCAGCATCCACATCGCATCACCAACTTCTTCATCGATAACATCCTGCGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS CCA 90 bp | AGGATGTTATCGATGAAGAAGTTGGTGATGCGATGTGGATGCTGGTaGTTGCCTGGCGCCTGTAGGACCTCGGGCAGCATCAGAGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RMLSMKKLVMRCGCW*LPGACRTSGSIRAR Trigger: GCGGGCTCTGATGCTGCCCGAGGTCCTACAGGCGCCAGGCAACCACCAGCATCCACATCGCATCACCAACTTCTTCATCGATAACATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS CCA 90 bp | CGCAGGATGTTATCGATGAAGAAGTTGGTGATGCGATGTGGATGCTaGTGGTTGCCTGGCGCCTGTAGGACCTCGGGCAGCATCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRMLSMKKLVMRCGC*WLPGACRTSGSIRA Trigger: GGCTCTGATGCTGCCCGAGGTCCTACAGGCGCCAGGCAACCACCAGCATCCACATCGCATCACCAACTTCTTCATCGATAACATCCTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CAA 90 bp | GCCACTGTGCTGGCCCCAGGTGGATGTTTGGACACCTTTTCCCATACACTAAACTCCGACTTGCCCTCCTaGGCCGTGGTGGAATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ATVLAPGGCLDTFSHTLNSDLPS*AVVEWL Trigger: CAACCATTCCACCACGGCCAAGGAGGGCAAGTCGGA...GTTTAGTGTATGGGAAAAGGTGTCCAAACATCCACCTGGGGCCAGCACAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CAA 90 bp | GAAGAAAAAGGAAAGGAAGATGATTCCAACTCGCTCTGCCAGGCCCCAAGGCCTCCCAAGCCCCGGGCTTaGAGCACTCCATCCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EEKGKEDDSNSLCQAPRPPKPRA*STPSKE Trigger: TTCCTTGGATGGAGTGCTCAAAGCCCGGGGCTTGGG...AGGCCTTGGGGCCTGGCAGAGCGAGTTGGAATCATCTTCCTTTCCTTTTTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CAA 90 bp | GAAGAAAAAGGAAAGGAAGATGATTCCAACTCGCTCTGCCAGGCCCCAAGGCCTGCTGTGCGAGGCCGCTaGTCCTCTTTGTTAGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EEKGKEDDSNSLCQAPRPAVRGR*SSLLGF Trigger: GAACCCTAACAAAGAGGACAAGCGGCCTCGCACAGC...AGGCCTTGGGGCCTGGCAGAGCGAGTTGGAATCATCTTCCTTTCCTTTTTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CAA 90 bp | TTACACATGTCCTCTAGATTCGGGAGGATTCGAGTTCCTTTGAAAGTCAAGGTACAGAGTGGCGCTGGCTaGAGAGCTGTCCGAGTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LHMSSRFGRIRVPLKVKVQSGAG*RAVRVG Trigger: TCCGACTCGGACAGCTCTCAAGCCAGCGCCACTCTG...TACCTTGACTTTCAAAGGAACTCGAATCCTCCCGAATCTAGAGGACATGTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CAA 90 bp | ACTGTGCTGGCCCCAGGTGGATGTTTGGACACCTTTTCCCATACACTAAACAGATTGCCCGTGGCTTTCTaGATTTTGGCCCGCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVLAPGGCLDTFSHTLNRLPVAF*ILARLF Trigger: GAACAAGCGGGCCAAAATCAAGAAAGCCACGGGCAA...TCTGTTTAGTGTATGGGAAAAGGTGTCCAAACATCCACCTGGGGCCAGCACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CAA 90 bp | CCTGCTAAAAGGCATGTGTTCCACCGACCCCCAAGCAGCAGATGGTTATTCACAGCCAAAGTGTTCTTGTaGCCCGTGGCTTTCTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: PAKRHVFHRPPSSRWLFTAKVFL*PVAFLI Trigger: AATCAAGAAAGCCACGGGCAACAAGAACACTTTGGC...TGTGAATAACCATCTGCTGCTTGGGGGTCGGTGGAACACATGCCTTTTAGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CAA 90 bp | AGAAGGTTGGCACGAATATGTACAAAGAGAAAGTGTTGGCGCAGTGAAATAAAGTTATCGATGAAGAAGTaGGTGATGCGATGTGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: RRLARICTKRKCWRSEIKLSMKK*VMRCGC Trigger: GCATCCACATCGCATCACCAACTTCTTCATCGATAA...CTTTATTTCACTGCGCCAACACTTTCTCTTTGTACATATTCGTGCCAACCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS-3UTR CAA 90 bp | TTCTGTTTTTATAGCTTCCTTTTCAGAAGGTTGGCACGAATATGTACAAAGAGAACCGCCAAAGTGTTCTaGTTGCCCGTGGCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FCFYSFLFRRLARICTKRTAKVF*LPVAFL Trigger: CAAGAAAGCCACGGGCAACAAGAACACTTTGGCGGT...TCTCTTTGTACATATTCGTGCCAACCTTCTGAAAAGGAAGCTATAAAAACAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS GCA 72 bp | GCTGGGTTCGGTCGGGACTCCCTGGCGCCCAGTAGCTaGTCGGCTCCGCCTGCGCCGCCGCCGCCTCCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: AGFGRDSLAPSS*SAPPAPPPPPS Trigger: CGAAGGAGGCGGCGGCGGCGCAGGCGGAGCCGAGCAGCTACTGGGCGCCAGGGAGTCCCGACCGAACCCAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS CCA 72 bp | GGTCGCCAGCGGCGGCGGAGAGCGTTCCTCCCGCGCTaGGTGCGCACGCTGGGTTCGGTCGGGACTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GRQRRRRAFLPR*VRTLGSVGTPW Trigger: CCAGGGAGTCCCGACCGAACCCAGCGTGCGCACCCAGCGCGGGAGGAACGCTCTCCGCCGCCGCTGGCGACC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS CCA 72 bp | CCCAAGCGGGCCAGAGCATGGGCTGCGCGCCCAGAGTaGCGCTGGCTTGAGAGCTGTCCGAGTCGGAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PKRARAWAARPE*RWLESCPSRSS Trigger: TGAGCTCCGACTCGGACAGCTCTCAAGCCAGCGCCACTCTGGGCGCGCAGCCCATGCTCTGGCCCGCTTGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS TCA 72 bp | TCACCGACAGGTCACCGCCGCCCAAGCCCCGGGCTTTaGGCACTCCATCCAAGGAACCCCCAGGATCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SPTGHRRPSPGL*ALHPRNPQDRR Trigger: CCGGCGATCCTGGGGGTTCCTTGGATGGAGTGCTCAAAGCCCGGGGCTTGGGCGGCGGTGACCTGTCGGTGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS CCA 72 bp | AATAGCGCGTGCAGTAGACCCAAGCGGGCCAGAGCATaGGCTGCGCGCCCAGAGTGGCGCTGGCTTGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: NSACSRPKRARA*AARPEWRWLES Trigger: GCTCTCAAGCCAGCGCCACTCTGGGCGCGCAGCCCATGCTCTGGCCCGCTTGGGTCTACTGCACGCGCTATT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS GCA 72 bp | ACCTGGGACCTGAAGAAGGCCGGTCAGAATAGCGCGTaGAGTAGACCCAAGCGGGCCAGAGCATGGGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: TWDLKKAGQNSA*SRPKRARAWAA Trigger: CGCAGCCCATGCTCTGGCCCGCTTGGGTCTACTGCACGCGCTATTCTGACCGGCCTTCTTCAGGTCCCAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS CAA 90 bp | ATGTTATCGATGAAGAAGTTGGTGATGCGATGTGGATGCTGGTGGTaGCCTGGCGCCTGTAGGACCTCGGGCAGCATCAGAGCCCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: MLSMKKLVMRCGCWW*PGACRTSGSIRARR Trigger: CCGGCGGGCTCTGATGCTGCCCGAGGTCCTACAGGCGCCAGGCAACCACCAGCATCCACATCGCATCACCAACTTCTTCATCGATAACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS CCA 72 bp | TCGATGAAGAAGTTGGTGATGCGATGTGGATGCTGGTaGTTGCCTGGCGCCTGTAGGACCTCGGGCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: SMKKLVMRCGCW*LPGACRTSGSI Trigger: GATGCTGCCCGAGGTCCTACAGGCGCCAGGCAACCACCAGCATCCACATCGCATCACCAACTTCTTCATCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS CAA 90 bp | TTTCGGCGGCCAAACTCAGGCCGCAGGATGTTATCGATGAAGAAGTaGGTGATGCGATGTGGATGCTGGTGGTTGCCTGGCGCCTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: FRRPNSGRRMLSMKK*VMRCGCWWLPGACR Trigger: CCTACAGGCGCCAGGCAACCACCAGCATCCACATCGCATCACCAACTTCTTCATCGATAACATCCTGCGGCCTGAGTTTGGCCGCCGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
||
| CDS CCA 72 bp | TTATCGATGAAGAAGTTGGTGATGCGATGTGGATGCTaGTGGTTGCCTGGCGCCTGTAGGACCTCGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSMKKLVMRCGC*WLPGACRTSGS Trigger: GCTGCCCGAGGTCCTACAGGCGCCAGGCAACCACCAGCATCCACATCGCATCACCAACTTCTTCATCGATAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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| CDS CAA 72 bp | ATGAAGAAGTTGGTGATGCGATGTGGATGCTGGTGGTaGCCTGGCGCCTGTAGGACCTCGGGCAGCATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: MKKLVMRCGCWW*PGACRTSGSIR Trigger: TCTGATGCTGCCCGAGGTCCTACAGGCGCCAGGCAACCACCAGCATCCACATCGCATCACCAACTTCTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
||
| CDS CAA 90 bp | TGGAGCTGCTCAGCAGTGAAGGCTGTGCGAGGCCGCTTGTCCTCTTaGTTAGGGTTCTTCTTCTTTGGTTTTCGGGACCTGGGACCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: WSCSAVKAVRGRLSS*LGFFFFGFRDLGPE Trigger: TTCAGGTCCCAGGTCCCGAAAACCAAAGAAGAAGAACCCTAACAAAGAGGACAAGCGGCCTCGCACAGCCTTCACTGCTGAGCAGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
||
| CDS CAA 72 bp | CCAAACTCAGGCCGCAGGATGTTATCGATGAAGAAGTaGGTGATGCGATGTGGATGCTGGTGGTTGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PNSGRRMLSMKK*VMRCGCWWLPG Trigger: GCCAGGCAACCACCAGCATCCACATCGCATCACCAACTTCTTCATCGATAACATCCTGCGGCCTGAGTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
||
| CDS CAA 72 bp | TCAGCAGTGAAGGCTGTGCGAGGCCGCTTGTCCTCTTaGTTAGGGTTCTTCTTCTTTGGTTTTCGGGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: SAVKAVRGRLSS*LGFFFFGFRDL Trigger: CAGGTCCCGAAAACCAAAGAAGAAGAACCCTAACAAAGAGGACAAGCGGCCTCGCACAGCCTTCACTGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
||
| CDS CAA 72 bp | TGGAGCTGCTCAGCAGTGAAGGCTGTGCGAGGCCGCTaGTCCTCTTTGTTAGGGTTCTTCTTCTTTGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: WSCSAVKAVRGR*SSLLGFFFFGF Trigger: AAAACCAAAGAAGAAGAACCCTAACAAAGAGGACAAGCGGCCTCGCACAGCCTTCACTGCTGAGCAGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036177.9 |
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