Pregenerated sensors for EN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058665Ensembl transcript IDs: ENSMUST00000079721.9
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGTCCGAGTCTTACTCCCGTTTCAAAAACCGTTTTGTTCCTATGTaGATGTCCACTCGGAGGATTGCTTTCTCTTGCTCGCTTTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: LSESYSRFKNRFVPM*MSTRRIAFSCSLSL Trigger: CAGAGAAAGCGAGCAAGAGAAAGCAATCCTCCGAGTGGACATTCACATAGGAACAAAACGGTTTTTGAAACGGGAGTAAGACTCGGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGCGTTGGGGGTGCAGGAGGTACCCAGAGAAGCAAAAACATTCAAAGGAAAATCTGCGTGGGGCTGGTaGAGCGGCAGCCCCGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: PALGVQEVPREAKTFKGKSAWGW*SGSPEE Trigger: CTCCTCGGGGCTGCCGCTTCACCAGCCCCACGCAGA...TTTTCCTTTGAATGTTTTTGCTTCTCTGGGTACCTCCTGCACCCCCAACGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCAGACACACAAGGAAACACACTCACACTCACACAAAGAAAAGTCCCAGACAGCCCCGAGGAGCCTaGAGGTGGCACGGGCGCCGT | + |
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Preference number: 2 (lower is better) Translates to: RGRHTRKHTHTHTKKSPRQPRGA*RWHGRR Trigger: ACGGCGCCCGTGCCACCTCCAGGCTCCTCGGGGCTG...TCTGGGACTTTTCTTTGTGTGAGTGTGAGTGTGTTTCCTTGTGTGTCTGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR-3UTR GCA 90 bp | GCTTGTAGCGGCGGTTCAGTCTCGCAGTCTGTGGGGTTGTATTTCTCAAGGAGTCATAGCGATCGTCTCTaGGTGGGGCTGGTGAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: ACSGGSVSQSVGLYFSRSHSDRL*VGLVKR Trigger: CCGCTTCACCAGCCCCACGCAGAGACGATCGCTATG...ACTCCTTGAGAAATACAACCCCACAGACTGCGAGACTGAACCGCCGCTACAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCAGACACACAAGGAAACACACTCACACTCACACAAAGAAAAGTCCCAGAGGCCAGCGTTGGGGGTaGAGGAGGTACCCAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: RGRHTRKHTHTHTKKSPRGQRWG*RRYPEK Trigger: CTTCTCTGGGTACCTCCTGCACCCCCAACGCTGGCC...TCTGGGACTTTTCTTTGTGTGAGTGTGAGTGTGTTTCCTTGTGTGTCTGCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCAGACACACAAGGAAACACACTCACACTCACACAAAGAAAAGTCCCAGAAACCAGGGCCAGCGTTaGGGGTGCAGGAGGTACCCA | + |
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Preference number: 2 (lower is better) Translates to: RGRHTRKHTHTHTKKSPRNQGQR*GCRRYP Trigger: TGGGTACCTCCTGCACCCCCAACGCTGGCCCTGGTT...TCTGGGACTTTTCTTTGTGTGAGTGTGAGTGTGTTTCCTTGTGTGTCTGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR CAA 90 bp | CCCCATAGCACCTGTCCGAGTCTTACTCCCGTTTCAAAAACCGTTTaGTTCCTATGTGAATGTCCACTCGGAGGATTGCTTTCTCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: PHSTCPSLTPVSKTV*FLCECPLGGLLSLA Trigger: AGCAAGAGAAAGCAATCCTCCGAGTGGACATTCACATAGGAACAAAACGGTTTTTGAAACGGGAGTAAGACTCGGACAGGTGCTATGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR-3UTR CCA 90 bp | ATAATAAAATCTTTGGCTTGTAGCGGCGGTTCAGTCTCGCAGTCTGTGGGGTTGCGGTCGAAAGCAGTTTaGCTAGATAGAGCTTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: IIKSLACSGGSVSQSVGLRSKAV*LDRALR Trigger: CCTTAAAGCTCTATCTAGCCAAACTGCTTTCGACCG...CAACCCCACAGACTGCGAGACTGAACCGCCGCTACAAGCCAAAGATTTTATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR CCA 72 bp | GGGCTGGTGAAGCGGCAGCCCCGAGGAGCCTGGAGGTaGCACGGGCGCCGTTGGACCGCGGGCCCCGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: GLVKRQPRGAWR*HGRRWTAGPGA Trigger: AGCTCCGGGGCCCGCGGTCCAACGGCGCCCGTGCCACCTCCAGGCTCCTCGGGGCTGCCGCTTCACCAGCCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR CCA 72 bp | TGCGTGGGGCTGGTGAAGCGGCAGCCCCGAGGAGCCTaGAGGTGGCACGGGCGCCGTTGGACCGCGGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: CVGLVKRQPRGA*RWHGRRWTAGP Trigger: GGGGCCCGCGGTCCAACGGCGCCCGTGCCACCTCCAGGCTCCTCGGGGCTGCCGCTTCACCAGCCCCACGCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR GCA 72 bp | GCCCTGATTGATGCCTCCCTCCATAGCGATCGTCTCTaGGTGGGGCTGGTGAAGCGGCAGCCCCGAGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: ALIDASLHSDRL*VGLVKRQPRGA Trigger: GGCTCCTCGGGGCTGCCGCTTCACCAGCCCCACGCAGAGACGATCGCTATGGAGGGAGGCATCAATCAGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR TCA 72 bp | AGGATTGCTTTCTCTTGCTCGCTTTCTCTGTCGCCCTaGTTGATGCCTCCCTCCATAGCGATCGTCTCTGCG | + |
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Preference number: 3 (lower is better) Translates to: RIAFSCSLSLSP*LMPPSIAIVSA Trigger: CGCAGAGACGATCGCTATGGAGGGAGGCATCAATCAGGGCGACAGAGAAAGCGAGCAAGAGAAAGCAATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR CCA 72 bp | CTTTGGCTTGTAGCGGCGGTTCAGTCTCGCAGTCTGTaGGGTTGTATTTCTCAAGGAGTCTCCAGAAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: LWLVAAVQSRSL*GCISQGVSRKG Trigger: TCCTTTTCTGGAGACTCCTTGAGAAATACAACCCCACAGACTGCGAGACTGAACCGCCGCTACAAGCCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR-3UTR CAA 90 bp | AATAGATGTTTATTTTTCCCCCATAGCACCTGTCCGAGTCTTACTCCCGTTTCAGAGGATTGCTTTCTCTaGCTCGCTTTCTCTGTCGCC | + |
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Preference number: 3 (lower is better) Translates to: NRCLFFPHSTCPSLTPVSEDCFL*LAFSVA Trigger: GGCGACAGAGAAAGCGAGCAAGAGAAAGCAATCCTC...TGAAACGGGAGTAAGACTCGGACAGGTGCTATGGGGGAAAAATAAACATCTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR TCA 72 bp | TCTTACTCCCGTTTCAAAAACCGTTTTGTTCCTATGTaGATGTCCACTCGGAGGATTGCTTTCTCTTGCTCG | + |
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Preference number: 3 (lower is better) Translates to: SYSRFKNRFVPM*MSTRRIAFSCS Trigger: CGAGCAAGAGAAAGCAATCCTCCGAGTGGACATTCACATAGGAACAAAACGGTTTTTGAAACGGGAGTAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR-3UTR CAA 90 bp | ATAATAAAATCTTTGGCTTGTAGCGGCGGTTCAGTCTCGCAGTCTGTGGGGTTGGTTTCAAAAACCGTTTaGTTCCTATGTGAATGTCCA | + |
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Preference number: 3 (lower is better) Translates to: IIKSLACSGGSVSQSVGLVSKTV*FLCECP Trigger: TGGACATTCACATAGGAACAAAACGGTTTTTGAAAC...CAACCCCACAGACTGCGAGACTGAACCGCCGCTACAAGCCAAAGATTTTATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR CCA 90 bp | GCTTGTAGCGGCGGTTCAGTCTCGCAGTCTGTGGGGTTGTATTTCTCAAGGAGTACAGCGGTGGCGGGCTaGGAGCCGTCGGGTGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: ACSGGSVSQSVGLYFSRSTAVAG*EPSGGP Trigger: TGGCCCACCCGACGGCTCCCAGCCCGCCACCGCTGT...ACTCCTTGAGAAATACAACCCCACAGACTGCGAGACTGAACCGCCGCTACAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR GCA 90 bp | GCTTGTAGCGGCGGTTCAGTCTCGCAGTCTGTGGGGTTGTATTTCTCAAGGAGTGCGGCTTCCTCCTCCTaGTGCTGCGCCTCCTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: ACSGGSVSQSVGLYFSRSAASSS*CCASSG Trigger: GCCGGAGGAGGCGCAGCAGCAGGAGGAGGAAGCCGC...ACTCCTTGAGAAATACAACCCCACAGACTGCGAGACTGAACCGCCGCTACAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR TCA 90 bp | GCTTGTAGCGGCGGTTCAGTCTCGCAGTCTGTGGGGTTGTATTTCTCAAGGAGTAGGCCCGAGTCGCGCTaGCTTTTAGGCTCCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ACSGGSVSQSVGLYFSRSRPESR*LLGSGC Trigger: GCAGCCGGAGCCTAAAAGTCAGCGCGACTCGGGCCT...ACTCCTTGAGAAATACAACCCCACAGACTGCGAGACTGAACCGCCGCTACAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR GCA 90 bp | GCTTGTAGCGGCGGTTCAGTCTCGCAGTCTGTGGGGTTGTATTTCTCAAGGAGTCCCTGGGCCATGAGGTaGAGCGCCAGGCCGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: ACSGGSVSQSVGLYFSRSPWAMR*SARPFL Trigger: CAAGAACGGCCTGGCGCTGCACCTCATGGCCCAGGG...ACTCCTTGAGAAATACAACCCCACAGACTGCGAGACTGAACCGCCGCTACAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR GCA 90 bp | AGGGGCAGACACACAAGGAAACACACTCACACTCACACAAAGAAAAGTCCCAGACTCCATCGCTGCCGCTaGTGCCGCTGGCTCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RGRHTRKHTHTHTKKSPRLHRCR*CRWLLG Trigger: GCCCAGGAGCCAGCGGCAGCAGCGGCAGCGATGGAG...TCTGGGACTTTTCTTTGTGTGAGTGTGAGTGTGTTTCCTTGTGTGTCTGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR GCA 90 bp | AGGGGCAGACACACAAGGAAACACACTCACACTCACACAAAGAAAAGTCCCAGACATCGCTGCCGCTGCTaGCGCTGGCTCCTGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RGRHTRKHTHTHTKKSPRHRCRC*RWLLGS Trigger: TGAGCCCAGGAGCCAGCGGCAGCAGCGGCAGCGATG...TCTGGGACTTTTCTTTGTGTGAGTGTGAGTGTGTTTCCTTGTGTGTCTGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR GCA 90 bp | ATAATAAAATCTTTGGCTTGTAGCGGCGGTTCAGTCTCGCAGTCTGTGGGGTTGTGCGCCTCCTCCGGCTaGAGCCGAAGCCACCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: IIKSLACSGGSVSQSVGLCASSG*SRSHQE Trigger: CTCCTGGTGGCTTCGGCTGCAGCCGGAGGAGGCGCA...CAACCCCACAGACTGCGAGACTGAACCGCCGCTACAAGCCAAAGATTTTATTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR GCA 90 bp | GCTTGTAGCGGCGGTTCAGTCTCGCAGTCTGTGGGGTTGTATTTCTCAAGGAGTTTGAGTCTCTGCAGCTaGTCGGCCGTGAACGCCGTC | + |
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Preference number: 4 (lower is better) Translates to: ACSGGSVSQSVGLYFSRSLSLCS*SAVNAV Trigger: GACGGCGTTCACGGCCGAGCAGCTGCAGAGACTCAA...ACTCCTTGAGAAATACAACCCCACAGACTGCGAGACTGAACCGCCGCTACAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR CCA 90 bp | AGGGGCAGACACACAAGGAAACACACTCACACTCACACAAAGAAAAGTCCCAGACTGGGAGCCGTCGGGTaGGCCACAGTTCGCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: RGRHTRKHTHTHTKKSPRLGAVG*ATVRIW Trigger: CCAGATGCGAACTGTGGCCCACCCGACGGCTCCCAG...TCTGGGACTTTTCTTTGTGTGAGTGTGAGTGTGTTTCCTTGTGTGTCTGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR TCA 90 bp | CCAGCGTTGGGGGTGCAGGAGGTACCCAGAGAAGCAAAAACATTCAAAGGAAAAGAAGCCACCAGGAGCTaGGGCAGGGGCTGTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: PALGVQEVPREAKTFKGKEATRS*GRGCSF Trigger: AAAGGAACAGCCCCTGCCTCAGCTCCTGGTGGCTTC...TTTTCCTTTGAATGTTTTTGCTTCTCTGGGTACCTCCTGCACCCCCAACGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR TCA 90 bp | CCAGCGTTGGGGGTGCAGGAGGTACCCAGAGAAGCAAAAACATTCAAAGGAAAAGTCGCCGCTGCTCCGTaGTATAGCGGTTTGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PALGVQEVPREAKTFKGKVAAAP*YSGLPG Trigger: TCCAGGCAAACCGCTATATCACGGAGCAGCGGCGAC...TTTTCCTTTGAATGTTTTTGCTTCTCTGGGTACCTCCTGCACCCCCAACGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR GCA 90 bp | ATAATAAAATCTTTGGCTTGTAGCGGCGGTTCAGTCTCGCAGTCTGTGGGGTTGGGTCCGAATAGCGTGTaGAGTAGACCCAGGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: IIKSLACSGGSVSQSVGLGPNSV*SRPRRA Trigger: GGCCCGCCTGGGTCTACTGCACACGCTATTCGGACC...CAACCCCACAGACTGCGAGACTGAACCGCCGCTACAAGCCAAAGATTTTATTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR CAA 72 bp | GCTTGTAGCGGCGGTTCAGTCTCGCAGTCTGTGGGGTaGTATTTCTCAAGGAGTCTCCAGAAAAGGAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: ACSGGSVSQSVG*YFSRSLQKRKG Trigger: CCCCTTCCTTTTCTGGAGACTCCTTGAGAAATACAACCCCACAGACTGCGAGACTGAACCGCCGCTACAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR TCA 90 bp | AGGGGCAGACACACAAGGAAACACACTCACACTCACACAAAGAAAAGTCCCAGACGTGTGCCCAGAGAGTaGACGGGGTCTCTACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: RGRHTRKHTHTHTKKSPRRVPRE*TGSLPA Trigger: TGCAGGTAGAGACCCCGTTCACTCTCTGGGCACACG...TCTGGGACTTTTCTTTGTGTGAGTGTGAGTGTGTTTCCTTGTGTGTCTGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR TCA 90 bp | AATAGATGTTTATTTTTCCCCCATAGCACCTGTCCGAGTCTTACTCCCGTTTCAACAGTCCCTGGGCCATaGGGTGCAGCGCCAGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: NRCLFFPHSTCPSLTPVSTVPGP*GAAPGR Trigger: ACGGCCTGGCGCTGCACCTCATGGCCCAGGGACTGT...TGAAACGGGAGTAAGACTCGGACAGGTGCTATGGGGGAAAAATAAACATCTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR GCA 90 bp | AGAATAGATGTTTATTTTTCCCCCATAGCACCTGTCCGAGTCTTACTCCCGTTTAAGTTGGTGGTGCGGTaGAGCTGGGCCGCGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RIDVYFSPIAPVRVLLPFKLVVR*SWAAGC Trigger: GCAGCCCGCGGCCCAGCTGCACCGCACCACCAACTT...AAACGGGAGTAAGACTCGGACAGGTGCTATGGGGGAAAAATAAACATCTATTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR GCA 90 bp | AGAATAGATGTTTATTTTTCCCCCATAGCACCTGTCCGAGTCTTACTCCCGTTTGCTTCCTCCTCCTGCTaGTGCGCCTCCTCCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RIDVYFSPIAPVRVLLPFASSSC*CASSGC Trigger: GCAGCCGGAGGAGGCGCAGCAGCAGGAGGAGGAAGC...AAACGGGAGTAAGACTCGGACAGGTGCTATGGGGGAAAAATAAACATCTATTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR CCA 90 bp | AATAGATGTTTATTTTTCCCCCATAGCACCTGTCCGAGTCTTACTCCCGTTTCATGCCGCTGCTGCCGCTaGCTCCTGGGCTCAGACTCA | + |
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Preference number: 4 (lower is better) Translates to: NRCLFFPHSTCPSLTPVSCRCCR*LLGSDS Trigger: TGAGTCTGAGCCCAGGAGCCAGCGGCAGCAGCGGCA...TGAAACGGGAGTAAGACTCGGACAGGTGCTATGGGGGAAAAATAAACATCTATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR CCA 90 bp | AGGGGCAGACACACAAGGAAACACACTCACACTCACACAAAGAAAAGTCCCAGAGCCACAGTTCGCATCTaGAGCACACAAGAGCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: RGRHTRKHTHTHTKKSPRATVRI*STQERG Trigger: GCCTCGCTCTTGTGTGCTCCAGATGCGAACTGTGGC...TCTGGGACTTTTCTTTGTGTGAGTGTGAGTGTGTTTCCTTGTGTGTCTGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR TCA 90 bp | AGGGGCAGACACACAAGGAAACACACTCACACTCACACAAAGAAAAGTCCCAGACTCTCGTCTTTGTCCTaGACCGTGGTGGTAGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: RGRHTRKHTHTHTKKSPRLSSLS*TVVVEW Trigger: CCACTCTACCACCACGGTTCAGGACAAAGACGAGAG...TCTGGGACTTTTCTTTGTGTGAGTGTGAGTGTGTTTCCTTGTGTGTCTGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR GCA 90 bp | AGAATAGATGTTTATTTTTCCCCCATAGCACCTGTCCGAGTCTTACTCCCGTTTAACGGGGTCTCTACCTaGACCAGTCTGGCCTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: RIDVYFSPIAPVRVLLPFNGVST*TSLASV Trigger: GACCGAGGCCAGACTGGTGCAGGTAGAGACCCCGTT...AAACGGGAGTAAGACTCGGACAGGTGCTATGGGGGAAAAATAAACATCTATTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR CCA 90 bp | AGAATAGATGTTTATTTTTCCCCCATAGCACCTGTCCGAGTCTTACTCCCGTTTACCGTGGTGGTAGAGTaGTTGTACAGTCCCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RIDVYFSPIAPVRVLLPFTVVVE*LYSPWA Trigger: GGCCCAGGGACTGTACAACCACTCTACCACCACGGT...AAACGGGAGTAAGACTCGGACAGGTGCTATGGGGGAAAAATAAACATCTATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| 3UTR CAA 72 bp | ACCGTTTTGTTCCTATGTGAATGTCCACTCGGAGGATaGCTTTCTCTTGCTCGCTTTCTCTGTCGCCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: TVLFLCECPLGG*LSLARFLCRPD Trigger: ATCAGGGCGACAGAGAAAGCGAGCAAGAGAAAGCAATCCTCCGAGTGGACATTCACATAGGAACAAAACGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR GCA 90 bp | AGAATAGATGTTTATTTTTCCCCCATAGCACCTGTCCGAGTCTTACTCCCGTTTTCTTTAGCTTCCTGGTaGGTGGACCAGAGGACGGAC | + |
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Preference number: 4 (lower is better) Translates to: RIDVYFSPIAPVRVLLPFSLASW*VDQRTD Trigger: GTCCGTCCTCTGGTCCACGCACCAGGAAGCTAAAGA...AAACGGGAGTAAGACTCGGACAGGTGCTATGGGGGAAAAATAAACATCTATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR GCA 90 bp | AGAATAGATGTTTATTTTTCCCCCATAGCACCTGTCCGAGTCTTACTCCCGTTTCGTGATATAGCGGTTTaGCTGGAACTCCGCCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: RIDVYFSPIAPVRVLLPFRDIAV*LELRLE Trigger: CTCAAGGCGGAGTTCCAGGCAAACCGCTATATCACG...AAACGGGAGTAAGACTCGGACAGGTGCTATGGGGGAAAAATAAACATCTATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR TCA 90 bp | AGGGGCAGACACACAAGGAAACACACTCACACTCACACAAAGAAAAGTCCCAGATTAGGATGTTATCGATaGAAAAGTTGGTGGTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: RGRHTRKHTHTHTKKSPRLGCYR*KSWWCG Trigger: ACCGCACCACCAACTTTTTCATCGATAACATCCTAA...TCTGGGACTTTTCTTTGTGTGAGTGTGAGTGTGTTTCCTTGTGTGTCTGCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR TCA 90 bp | AGAATAGATGTTTATTTTTCCCCCATAGCACCTGTCCGAGTCTTACTCCCGTTTTGCCGGTGGCTTTCTTaGTCTTGGCACGCTTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: RIDVYFSPIAPVRVLLPFCRWLS*SWHACF Trigger: AAAACAAGCGTGCCAAGATCAAGAAAGCCACCGGCA...AAACGGGAGTAAGACTCGGACAGGTGCTATGGGGGAAAAATAAACATCTATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR CCA 90 bp | AGAATAGATGTTTATTTTTCCCCCATAGCACCTGTCCGAGTCTTACTCCCGTTTAACCAGATCTTGATCTaGGACTCATTCAGGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RIDVYFSPIAPVRVLLPFNQILI*DSFRLS Trigger: GCTCAGCCTGAATGAGTCCCAGATCAAGATCTGGTT...AAACGGGAGTAAGACTCGGACAGGTGCTATGGGGGAAAAATAAACATCTATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS TCA 90 bp | CGGCCGCCGCAGCAGCCGGGTTCCCGGCTTTGGATGCGCCGGCGCTaGCAGCGGTGGCGGGCTGGGAGCCGTCGGGTGGGCCACAGTTCG | + |
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Preference number: 5 (lower is better) Translates to: RPPQQPGSRLWMRRR*QRWRAGSRRVGHSS Trigger: CGAACTGTGGCCCACCCGACGGCTCCCAGCCCGCCACCGCTGTCAGCGCCGGCGCATCCAAAGCCGGGAACCCGGCTGCTGCGGCGGCCG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS GCA 90 bp | GGCTCCTGGGCTCAGACTCAGACTGAGGCCGCTCGGGGCCGCCGCTaGCACCGCGCCGAGGCCCGAGTCGCGCTGACTTTTAGGCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: GSWAQTQTEAARGRR*HRAEARVALTFRLR Trigger: CCGGAGCCTAAAAGTCAGCGCGACTCGGGCCTCGGCGCGGTGGCAGCGGCGGCCCCGAGCGGCCTCAGTCTGAGTCTGAGCCCAGGAGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS CCA 90 bp | GGATGCGCCGGCGCTGACAGCGGTGGCGGGCTGGGAGCCGTCGGGTaGGCCACAGTTCGCATCTGGAGCACACAAGAGCGAGGCAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: GCAGADSGGGLGAVG*ATVRIWSTQERGSP Trigger: GGGGCTGCCTCGCTCTTGTGTGCTCCAGATGCGAACTGTGGCCCACCCGACGGCTCCCAGCCCGCCACCGCTGTCAGCGCCGGCGCATCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS CCA 90 bp | AGCGGTGGCGGGCTGGGAGCCGTCGGGTGGGCCACAGTTCGCATCTaGAGCACACAAGAGCGAGGCAGCCCCCGAAGCTCGTGTGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: SGGGLGAVGWATVRI*STQERGSPRSSCAQ Trigger: CTGGGCACACGAGCTTCGGGGGCTGCCTCGCTCTTGTGTGCTCCAGATGCGAACTGTGGCCCACCCGACGGCTCCCAGCCCGCCACCGCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS GCA 90 bp | AGCCCCCGAAGCTCGTGTGCCCAGAGAGTGAACGGGGTCTCTACCTaGACCAGTCTGGCCTCGGTCACGCTCCACGCGGCTTCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SPRSSCAQRVNGVST*TSLASVTLHAASSS Trigger: GGAGGAGGAAGCCGCGTGGAGCGTGACCGAGGCCAGACTGGTGCAGGTAGAGACCCCGTTCACTCTCTGGGCACACGAGCTTCGGGGGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS TCA 90 bp | GCACACAAGAGCGAGGCAGCCCCCGAAGCTCGTGTGCCCAGAGAGTaGACGGGGTCTCTACCTGCACCAGTCTGGCCTCGGTCACGCTCC | + |
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Preference number: 5 (lower is better) Translates to: AHKSEAAPEARVPRE*TGSLPAPVWPRSRS Trigger: GGAGCGTGACCGAGGCCAGACTGGTGCAGGTAGAGACCCCGTTCACTCTCTGGGCACACGAGCTTCGGGGGCTGCCTCGCTCTTGTGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS GCA 90 bp | TCGCATCTGGAGCACACAAGAGCGAGGCAGCCCCCGAAGCTCGTGTaGCCAGAGAGTGAACGGGGTCTCTACCTGCACCAGTCTGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SHLEHTRARQPPKLV*PESERGLYLHQSGL Trigger: GAGGCCAGACTGGTGCAGGTAGAGACCCCGTTCACTCTCTGGGCACACGAGCTTCGGGGGCTGCCTCGCTCTTGTGTGCTCCAGATGCGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS GCA 90 bp | GCTTCCTGGTGCGTGGACCAGAGGACGGACGGTCCGAATAGCGTGTaGAGTAGACCCAGGCGGGCCACACTAGGGGTTGCTGTGAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: ASWCVDQRTDGPNSV*SRPRRATLGVAVSQ Trigger: CTGACTCACAGCAACCCCTAGTGTGGCCCGCCTGGGTCTACTGCACACGCTATTCGGACCGTCCGTCCTCTGGTCCACGCACCAGGAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS TCA 90 bp | GCTGTTCCTTTTTGCAACCGAAATCGGGCCTTAGGATGTTATCGATaGAAAAGTTGGTGGTGCGGTGCAGCTGGGCCGCGGGCTGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: AVPFCNRNRALGCYR*KSWWCGAAGPRAAA Trigger: AGCCGCAGCCCGCGGCCCAGCTGCACCGCACCACCAACTTTTTCATCGATAACATCCTAAGGCCCGATTTCGGTTGCAAAAAGGAACAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR CAA 90 bp | CCAGCGTTGGGGGTGCAGGAGGTACCCAGAGAAGCAAAAACATTCAAAGGAAAAAGCGCCAGGCCGTTCTaGATGCCGGTGGCTTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: PALGVQEVPREAKTFKGKSARPF*MPVAFL Trigger: CAAGAAAGCCACCGGCATCAAGAACGGCCTGGCGCT...TTTTCCTTTGAATGTTTTTGCTTCTCTGGGTACCTCCTGCACCCCCAACGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR CAA 90 bp | AGAATAGATGTTTATTTTTCCCCCATAGCACCTGTCCGAGTCTTACTCCCGTTTGTGGTGGTAGAGTGGTaGTACAGTCCCTGGGCCATG | + |
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Preference number: 5 (lower is better) Translates to: RIDVYFSPIAPVRVLLPFVVVEW*YSPWAM Trigger: CATGGCCCAGGGACTGTACAACCACTCTACCACCAC...AAACGGGAGTAAGACTCGGACAGGTGCTATGGGGGAAAAATAAACATCTATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS-3UTR CAA 90 bp | AATAGATGTTTATTTTTCCCCCATAGCACCTGTCCGAGTCTTACTCCCGTTTCATTATCGATGAAAAAGTaGGTGGTGCGGTGCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: NRCLFFPHSTCPSLTPVSLSMKK*VVRCSW Trigger: CCAGCTGCACCGCACCACCAACTTTTTCATCGATAA...TGAAACGGGAGTAAGACTCGGACAGGTGCTATGGGGGAAAAATAAACATCTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS GCA 72 bp | CGCGGCCGCCGCAGCAGCCGGGTTCCCGGCTTTGGATaGGCCGGCGCTGACAGCGGTGGCGGGCTGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: RGRRSSRVPGFG*AGADSGGGLGA Trigger: GGCTCCCAGCCCGCCACCGCTGTCAGCGCCGGCGCATCCAAAGCCGGGAACCCGGCTGCTGCGGCGGCCGCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS TCA 72 bp | CGCTGCTGCCGCTGGCTCCTGGGCTCAGACTCAGACTaGGGCCGCTCGGGGCCGCCGCTGCCACCGCGCCGA | + |
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Preference number: 6 (lower is better) Translates to: RCCRWLLGSDSD*GRSGPPLPPRR Trigger: TCGGCGCGGTGGCAGCGGCGGCCCCGAGCGGCCTCAGTCTGAGTCTGAGCCCAGGAGCCAGCGGCAGCAGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS TCA 72 bp | CAGCAGCCGGGTTCCCGGCTTTGGATGCGCCGGCGCTaGCAGCGGTGGCGGGCTGGGAGCCGTCGGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: QQPGSRLWMRRR*QRWRAGSRRVG Trigger: GCCCACCCGACGGCTCCCAGCCCGCCACCGCTGTCAGCGCCGGCGCATCCAAAGCCGGGAACCCGGCTGCTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS GCA 72 bp | AGACAGGGTGCCGCAGGAGGCGACGGGGGCGCTGGCTaGGGGGACACCGGCACGCTGTCTCCATCGCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: RQGAAGGDGGAG*GDTGTLSPSLP Trigger: CGGCAGCGATGGAGACAGCGTGCCGGTGTCCCCGCAGCCAGCGCCCCCGTCGCCTCCTGCGGCACCCTGTCT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS CCA 72 bp | CGGCAGACAGGGTGCCGCAGGAGGCGACGGGGGCGCTaGCTGCGGGGACACCGGCACGCTGTCTCCATCGCT | + |
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Preference number: 6 (lower is better) Translates to: RQTGCRRRRRGR*LRGHRHAVSIA Trigger: AGCGATGGAGACAGCGTGCCGGTGTCCCCGCAGCCAGCGCCCCCGTCGCCTCCTGCGGCACCCTGTCTGCCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS GCA 72 bp | GCTCAGACTCAGACTGAGGCCGCTCGGGGCCGCCGCTaGCACCGCGCCGAGGCCCGAGTCGCGCTGACTTTT | + |
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Preference number: 6 (lower is better) Translates to: AQTQTEAARGRR*HRAEARVALTF Trigger: AAAAGTCAGCGCGACTCGGGCCTCGGCGCGGTGGCAGCGGCGGCCCCGAGCGGCCTCAGTCTGAGTCTGAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS GCA 72 bp | CTGGCCTCGGTCACGCTCCACGCGGCTTCCTCCTCCTaGTGCTGCGCCTCCTCCGGCTGCAGCCGAAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LASVTLHAASSS*CCASSGCSRSH Trigger: GTGGCTTCGGCTGCAGCCGGAGGAGGCGCAGCAGCAGGAGGAGGAAGCCGCGTGGAGCGTGACCGAGGCCAG 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS CCA 72 bp | GGGCTGGGAGCCGTCGGGTGGGCCACAGTTCGCATCTaGAGCACACAAGAGCGAGGCAGCCCCCGAAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: GLGAVGWATVRI*STQERGSPRSS Trigger: CGAGCTTCGGGGGCTGCCTCGCTCTTGTGTGCTCCAGATGCGAACTGTGGCCCACCCGACGGCTCCCAGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS CCA 72 bp | GGCGCTGACAGCGGTGGCGGGCTGGGAGCCGTCGGGTaGGCCACAGTTCGCATCTGGAGCACACAAGAGCGA | + |
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Preference number: 6 (lower is better) Translates to: GADSGGGLGAVG*ATVRIWSTQER Trigger: TCGCTCTTGTGTGCTCCAGATGCGAACTGTGGCCCACCCGACGGCTCCCAGCCCGCCACCGCTGTCAGCGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS GCA 72 bp | AGGATCGCAGGGTTGTGTTCCGGGAACTTGGCGCCCTaGGCCCCGGGACTCCCCGCGTTGCCTCCACTACCA | + |
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Preference number: 6 (lower is better) Translates to: RIAGLCSGNLAP*APGLPALPPLP Trigger: TGGTAGTGGAGGCAACGCGGGGAGTCCCGGGGCGCAGGGCGCCAAGTTCCCGGAACACAACCCTGCGATCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS TCA 72 bp | AGCGAGGCAGCCCCCGAAGCTCGTGTGCCCAGAGAGTaGACGGGGTCTCTACCTGCACCAGTCTGGCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SEAAPEARVPRE*TGSLPAPVWPR Trigger: CCGAGGCCAGACTGGTGCAGGTAGAGACCCCGTTCACTCTCTGGGCACACGAGCTTCGGGGGCTGCCTCGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS GCA 72 bp | AGCTCGTGTGCCCAGAGAGTGAACGGGGTCTCTACCTaGACCAGTCTGGCCTCGGTCACGCTCCACGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: SSCAQRVNGVST*TSLASVTLHAA Trigger: AGCCGCGTGGAGCGTGACCGAGGCCAGACTGGTGCAGGTAGAGACCCCGTTCACTCTCTGGGCACACGAGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS GCA 72 bp | GAGCACACAAGAGCGAGGCAGCCCCCGAAGCTCGTGTaGCCAGAGAGTGAACGGGGTCTCTACCTGCACCAG | + |
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Preference number: 6 (lower is better) Translates to: EHTRARQPPKLV*PESERGLYLHQ Trigger: CTGGTGCAGGTAGAGACCCCGTTCACTCTCTGGGCACACGAGCTTCGGGGGCTGCCTCGCTCTTGTGTGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS GCA 72 bp | TGCGTGGACCAGAGGACGGACGGTCCGAATAGCGTGTaGAGTAGACCCAGGCGGGCCACACTAGGGGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: CVDQRTDGPNSV*SRPRRATLGVA Trigger: AGCAACCCCTAGTGTGGCCCGCCTGGGTCTACTGCACACGCTATTCGGACCGTCCGTCCTCTGGTCCACGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS CAA 72 bp | CAGGCGGGCCACACTAGGGGTTGCTGTGAGTCAGTCTaGACCACCGGCCCACCGTTAGCCGAACCCATGAGT | + |
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Preference number: 6 (lower is better) Translates to: QAGHTRGCCESV*TTGPPLAEPMS Trigger: ACTCATGGGTTCGGCTAACGGTGGGCCGGTGGTCAAGACTGACTCACAGCAACCCCTAGTGTGGCCCGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS CAA 72 bp | CCGAAATCGGGCCTTAGGATGTTATCGATGAAAAAGTaGGTGGTGCGGTGCAGCTGGGCCGCGGGCTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: PKSGLRMLSMKK*VVRCSWAAGCG Trigger: GCCGCAGCCCGCGGCCCAGCTGCACCGCACCACCAACTTTTTCATCGATAACATCCTAAGGCCCGATTTCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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| CDS TCA 72 bp | TTTTGCAACCGAAATCGGGCCTTAGGATGTTATCGATaGAAAAGTTGGTGGTGCGGTGCAGCTGGGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: FCNRNRALGCYR*KSWWCGAAGPR Trigger: CCGCGGCCCAGCTGCACCGCACCACCAACTTTTTCATCGATAACATCCTAAGGCCCGATTTCGGTTGCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079721.9 |
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