Pregenerated sensors for EMX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043969Ensembl transcript IDs: ENSMUST00000062216.4, ENSMUST00000174353.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCCGGCGCCGGTTCCCGGTCCAGTGCCCTCGCTGTCCAAAGTCTaGTGCGAGCGTCACTGCTCTGATTCCCTCTCTCCCTTTCTCGGT | + |
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Preference number: 1 (lower is better) Translates to: GPAPVPGPVPSLSKV*CERHCSDSLSPFLG Trigger: ACCGAGAAAGGGAGAGAGGGAATCAGAGCAGTGACGCTCGCAGCAGACTTTGGACAGCGAGGGCACTGGACCGGGAACCGGCGCCGGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR GCA 90 bp | CTCTTTAGACGAGGGTTGCATGTTGATGATCGGGCCTCCGTCCTCTaGTGTCCTGTAAGCGGTGCCCGGCCCGGCGCCGGTTCCCGGTCC | + |
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Preference number: 1 (lower is better) Translates to: LFRRGLHVDDRASVL*CPVSGARPGAGSRS Trigger: GGACCGGGAACCGGCGCCGGGCCGGGCACCGCTTACAGGACAGCAGAGGACGGAGGCCCGATCATCAACATGCAACCCTCGTCTAAAGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR GCA 90 bp | CCGGCGCCGGTTCCCGGTCCAGTGCCCTCGCTGTCCAAAGTCTGCTaGGAGCGTCACTGCTCTGATTCCCTCTCTCCCTTTCTCGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: PAPVPGPVPSLSKVC*ERHCSDSLSPFLGG Trigger: TCCACCGAGAAAGGGAGAGAGGGAATCAGAGCAGTGACGCTCGCAGCAGACTTTGGACAGCGAGGGCACTGGACCGGGAACCGGCGCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR GCA 90 bp | CTGATTCTTCTCAGGGGCACCCTCCCCCGCCCTCCATCCCAGTCCTaGTCCCTCATTTCTCTGTCAGAGGACCACTATCTCCGAGCCTAC | + |
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Preference number: 1 (lower is better) Translates to: LILLRGTLPRPPSQS*SLISLSEDHYLRAY Trigger: GTAGGCTCGGAGATAGTGGTCCTCTGACAGAGAAATGAGGGAGCAGGACTGGGATGGAGGGCGGGGGAGGGTGCCCCTGAGAAGAATCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR TCA 90 bp | TCCAGTGCCCTCGCTGTCCAAAGTCTGCTGCGAGCGTCACTGCTCTaGTTCCCTCTCTCCCTTTCTCGGTGGATGTGTGTGCAGTTTGTT | + |
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Preference number: 1 (lower is better) Translates to: SSALAVQSLLRASLL*FPLSLSRWMCVQFV Trigger: AACAAACTGCACACACATCCACCGAGAAAGGGAGAGAGGGAATCAGAGCAGTGACGCTCGCAGCAGACTTTGGACAGCGAGGGCACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR GCA 90 bp | TTCCTCTCTCTCCCTCCCAGTCTCTGTCTCTCTCACTCACTCAGCTaGCTCTTTAGACGAGGGTTGCATGTTGATGATCGGGCCTCCGTC | + |
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Preference number: 1 (lower is better) Translates to: FLSLPPSLCLSHSLS*LFRRGLHVDDRASV Trigger: GACGGAGGCCCGATCATCAACATGCAACCCTCGTCTAAAGAGGCAGCTGAGTGAGTGAGAGAGACAGAGACTGGGAGGGAGAGAGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR TCA 90 bp | CGGAATACCCGCCAATCATCTTGTTTCCCTGGTTTGGCATTTGACTaGCAGCTCCCCTTGTCAGAATGTGCCTTTGCCTCACAAGGATCA | + |
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Preference number: 1 (lower is better) Translates to: RNTRQSSCFPGLAFD*QLPLSECAFASQGS Trigger: TGATCCTTGTGAGGCAAAGGCACATTCTGACAAGGGGAGCTGTCAGTCAAATGCCAAACCAGGGAAACAAGATGATTGGCGGGTATTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR CCA 90 bp | ACTTCGATAAGCGGAATACCCGCCAATCATCTTGTTTCCCTGGTTTaGCATTTGACTGACAGCTCCCCTTGTCAGAATGTGCCTTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: TSISGIPANHLVSLV*HLTDSSPCQNVPLP Trigger: AGGCAAAGGCACATTCTGACAAGGGGAGCTGTCAGTCAAATGCCAAACCAGGGAAACAAGATGATTGGCGGGTATTCCGCTTATCGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR TCA 90 bp | TGTGCTGTCCATTTTTGTAGGATTGGGTTTGGACTTTTAATCGTCTaGGGTCACATCTATTTCCTCCGGACTCGCCTGCTTGGTAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: CAVHFCRIGFGLLIV*GHIYFLRTRLLGSN Trigger: ATTGCTACCAAGCAGGCGAGTCCGGAGGAAATAGATGTGACCTCAGACGATTAAAAGTCCAAACCCAATCCTACAAAAATGGACAGCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174353.2 |
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| 3UTR TCA 90 bp | AGTGGCTGGATGCAGTCAATCTCTCCAACCACTAAAAGGAAAAGTTaGCTTGGTGATTTAAAGTATCAGAATGTTAGGAAAGGAAATATC | + |
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Preference number: 1 (lower is better) Translates to: SGWMQSISPTTKRKS*LGDLKYQNVRKGNI Trigger: GATATTTCCTTTCCTAACATTCTGATACTTTAAATCACCAAGTCAACTTTTCCTTTTAGTGGTTGGAGAGATTGACTGCATCCAGCCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCGGTGCCCGGCCCGGCGCCGGTTCCCGGTCCAGTGCCCTCGCTGTCCAAAGCGAGCGTCACTGCTCTaGTTCCCTCTCTCCCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: KRCPARRRFPVQCPRCPKRASLL*FPLSLS Trigger: AGAAAGGGAGAGAGGGAATCAGAGCAGTGACGCTCG...CTTTGGACAGCGAGGGCACTGGACCGGGAACCGGCGCCGGGCCGGGCACCGCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR GCA 90 bp | CGGCGCCGGTTCCCGGTCCAGTGCCCTCGCTGTCCAAAGTCTGCTGCGAGCGTCCTGTCCAAAGTCTGCTaGGAGCGTCACTGCTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: RRRFPVQCPRCPKSAASVLSKVC*ERHCSD Trigger: ATCAGAGCAGTGACGCTCGCAGCAGACTTTGGACAG...GACGCTCGCAGCAGACTTTGGACAGCGAGGGCACTGGACCGGGAACCGGCGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCTGTCCTGTAAGCGGTGCCCGGCCCGGCGCCGGTTCCCGGTCCAGTGCCTCTCCCTGTCTTTCTTaGTCTGTGCTGTCCATTTTT | + |
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Preference number: 2 (lower is better) Translates to: LCCPVSGARPGAGSRSSASPCLS*SVLSIF Trigger: AAAAATGGACAGCACAGAGCAAGAAAGACAGGGAGA...GGCACTGGACCGGGAACCGGCGCCGGGCCGGGCACCGCTTACAGGACAGCAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR CCA 90 bp | AGCATGAGTCCTGATTCTTCTCAGGGGCACCCTCCCCCGCCCTCCATCCCAGTCCTTGTTTCCCTGGTTTaGCATTTGACTGACAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: SMSPDSSQGHPPPPSIPVLVSLV*HLTDSS Trigger: GGAGCTGTCAGTCAAATGCCAAACCAGGGAAACAAG...GACTGGGATGGAGGGCGGGGGAGGGTGCCCCTGAGAAGAATCAGGACTCATGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR CAA 90 bp | AGTCTCTGTCTCTCTCACTCACTCAGCTGCCTCTTTAGACGAGGGTaGCATGTTGATGATCGGGCCTCCGTCCTCTGCTGTCCTGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: SLCLSHSLSCLFRRG*HVDDRASVLCCPVS Trigger: GCTTACAGGACAGCAGAGGACGGAGGCCCGATCATCAACATGCAACCCTCGTCTAAAGAGGCAGCTGAGTGAGTGAGAGAGACAGAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTGCTCCCTCATTTCTCTGTCAGAGGACCACTATCTCCGAGCCTACTTCGTTCCCTGGTTTGGCATTTaGCTGACAGCTCCCCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: SCSLISLSEDHYLRAYFVPWFGI*LTAPLV Trigger: GACAAGGGGAGCTGTCAGTCAAATGCCAAACCAGGG...AACGAAGTAGGCTCGGAGATAGTGGTCCTCTGACAGAGAAATGAGGGAGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR TCA 90 bp | GAAACTCAGTGCTTGAAAACTCCCATGTCCTTGGCCACGCCACCATCACCCCATGGTTTGGCATTTGACTaGCAGCTCCCCTTGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: ETQCLKTPMSLATPPSPHGLAFD*QLPLSE Trigger: TTCTGACAAGGGGAGCTGTCAGTCAAATGCCAAACC...ATGGGGTGATGGTGGCGTGGCCAAGGACATGGGAGTTTTCAAGCACTGAGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR GCA 90 bp | GAAACTCAGTGCTTGAAAACTCCCATGTCCTTGGCCACGCCACCATCACCCCATTCTCACTCACTCAGCTaGCTCTTTAGACGAGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: ETQCLKTPMSLATPPSPHSHSLS*LFRRGL Trigger: CAACCCTCGTCTAAAGAGGCAGCTGAGTGAGTGAGA...ATGGGGTGATGGTGGCGTGGCCAAGGACATGGGAGTTTTCAAGCACTGAGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAACTCCCATGTCCTTGGCCACGCCACCATCACCCCATTAAATACAGTCCTTTCCTCCGGACTCGCCTaGTTGGTAGCAATTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: ENSHVLGHATITPLNTVLSSGLA*LVAILH Trigger: GTGGAGAATTGCTACCAAGCAGGCGAGTCCGGAGGA...AAGGACTGTATTTAATGGGGTGATGGTGGCGTGGCCAAGGACATGGGAGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174353.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAACTCCCATGTCCTTGGCCACGCCACCATCACCCCATTAAATACAGTCCTTGGTTTGGCATTTGACTaGCAGCTCCCCTTGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: ENSHVLGHATITPLNTVLGLAFD*QLPLSE Trigger: TTCTGACAAGGGGAGCTGTCAGTCAAATGCCAAACC...AAGGACTGTATTTAATGGGGTGATGGTGGCGTGGCCAAGGACATGGGAGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR CCA 90 bp | AACTCCCATGTCCTTGGCCACGCCACCATCACCCCATTAAATACAGTCCTTCCTCTCTCCCTTTCTCGGTaGATGTGTGTGCAGTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: NSHVLGHATITPLNTVLPLSLSR*MCVQFV Trigger: AACAAACTGCACACACATCCACCGAGAAAGGGAGAG...AGGAAGGACTGTATTTAATGGGGTGATGGTGGCGTGGCCAAGGACATGGGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCTCCCTCATTTCTCTGTCAGAGGACCACTATCTCCGAGCCTACTTCGTTCTCTCCCTTTCTCGGTaGATGTGTGTGCAGTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: SCSLISLSEDHYLRAYFVLSLSR*MCVQFV Trigger: AACAAACTGCACACACATCCACCGAGAAAGGGAGAG...AACGAAGTAGGCTCGGAGATAGTGGTCCTCTGACAGAGAAATGAGGGAGCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAACTCCCATGTCCTTGGCCACGCCACCATCACCCCATTAAATACAGTCCTTCTTGTTTCCCTGGTTTaGCATTTGACTGACAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: ENSHVLGHATITPLNTVLLVSLV*HLTDSS Trigger: GGAGCTGTCAGTCAAATGCCAAACCAGGGAAACAAG...AAGGACTGTATTTAATGGGGTGATGGTGGCGTGGCCAAGGACATGGGAGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR CAA 90 bp | CTGGTTTGGCATTTGACTGACAGCTCCCCTTGTCAGAATGTGCCTTaGCCTCACAAGGATCATTCATTCTCTCTCTCTCTCTCTCTCATT | + |
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Preference number: 2 (lower is better) Translates to: LVWHLTDSSPCQNVP*PHKDHSFSLSLSLI Trigger: AATGAGAGAGAGAGAGAGAGAGAATGAATGATCCTTGTGAGGCAAAGGCACATTCTGACAAGGGGAGCTGTCAGTCAAATGCCAAACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTCCGAGCCTACTTCGTTTAGCTTTCACAATCACTTTGACAATAGAAGGTATCGAGCGTCACTGCTCTaGTTCCCTCTCTCCCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: ISEPTSFSFHNHFDNRRYRASLL*FPLSLS Trigger: AGAAAGGGAGAGAGGGAATCAGAGCAGTGACGCTCG...ATACCTTCTATTGTCAAAGTGATTGTGAAAGCTAAACGAAGTAGGCTCGGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR GCA 90 bp | AACTCCCATGTCCTTGGCCACGCCACCATCACCCCATTAAATACAGTCCTTCCTGGAAACACTGTGAAGTaGAAAATTAAAAGTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: NSHVLGHATITPLNTVLPGNTVK*KIKSPV Trigger: CACAGGACTTTTAATTTTGCACTTCACAGTGTTTCC...AGGAAGGACTGTATTTAATGGGGTGATGGTGGCGTGGCCAAGGACATGGGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGGACCACTATCTCCGAGCCTACTTCGTTTAGCTTTCACAATCACTTTGACATGCAATTCAAGTTTTaGAACAGGTGTAGGATGGGG | + |
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Preference number: 2 (lower is better) Translates to: QRTTISEPTSFSFHNHFDMQFKF*NRCRMG Trigger: CCCCATCCTACACCTGTTTCAAAACTTGAATTGCAT...GTCAAAGTGATTGTGAAAGCTAAACGAAGTAGGCTCGGAGATAGTGGTCCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR GCA 90 bp | GACACTAAGGAAGCATTTGTAACCCTCTTTAGTAAGTCTATGGTCTTGGAAGAGCCCCTTGTCAGAATGTaGCTTTGCCTCACAAGGATC | + |
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Preference number: 2 (lower is better) Translates to: DTKEAFVTLFSKSMVLEEPLVRM*LCLTRI Trigger: GATCCTTGTGAGGCAAAGGCACATTCTGACAAGGGG...CTCTTCCAAGACCATAGACTTACTAAAGAGGGTTACAAATGCTTCCTTAGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGTTCTGAATGGCCATTATGATGAGTGGCTGGATGCAGTCAATCTCTCCAACTCTCCCTGTCTTTCTTaGTCTGTGCTGTCCATTTTT | + |
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Preference number: 2 (lower is better) Translates to: KVLNGHYDEWLDAVNLSNSPCLS*SVLSIF Trigger: AAAAATGGACAGCACAGAGCAAGAAAGACAGGGAGA...GTTGGAGAGATTGACTGCATCCAGCCACTCATCATAATGGCCATTCAGAACTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR GCA 90 bp | ATTATCATTTCTAAATGGACTTCGATAAGCGGAATACCCGCCAATCATCTTGTTCTGTCCAAAGTCTGCTaGGAGCGTCACTGCTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: IIISKWTSISGIPANHLVLSKVC*ERHCSD Trigger: ATCAGAGCAGTGACGCTCGCAGCAGACTTTGGACAG...AACAAGATGATTGGCGGGTATTCCGCTTATCGAAGTCCATTTAGAAATGATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR GCA 90 bp | ACTAAGGAAGCATTTGTAACCCTCTTTAGTAAGTCTATGGTCTTGGAAGAGAAACCTCCATCCCAGTCCTaGTCCCTCATTTCTCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: TKEAFVTLFSKSMVLEEKPPSQS*SLISLS Trigger: TGACAGAGAAATGAGGGAGCAGGACTGGGATGGAGG...TTTCTCTTCCAAGACCATAGACTTACTAAAGAGGGTTACAAATGCTTCCTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTTCTGAATGGCCATTATGATGAGTGGCTGGATGCAGTCAATCTCTCCAACATTATGATGAGTGGCTaGATGCAGTCAATCTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: KVLNGHYDEWLDAVNLSNIMMSG*MQSISP Trigger: TGGAGAGATTGACTGCATCCAGCCACTCATCATAAT...GTTGGAGAGATTGACTGCATCCAGCCACTCATCATAATGGCCATTCAGAACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGACCACTATCTCCGAGCCTACTTCGTTTAGCTTTCACAATCACTTTGACCCGACAACTGCTACATaGAATTCAAGTTTTGAAACA | + |
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Preference number: 2 (lower is better) Translates to: QRTTISEPTSFSFHNHFDPTTAT*NSSFET Trigger: TGTTTCAAAACTTGAATTGCATGTAGCAGTTGTCGG...GTCAAAGTGATTGTGAAAGCTAAACGAAGTAGGCTCGGAGATAGTGGTCCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGTTCTGAATGGCCATTATGATGAGTGGCTGGATGCAGTCAATCTCTCCAACCCGACAACTGCTACATaGAATTCAAGTTTTGAAACA | + |
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Preference number: 2 (lower is better) Translates to: KVLNGHYDEWLDAVNLSNPTTAT*NSSFET Trigger: TGTTTCAAAACTTGAATTGCATGTAGCAGTTGTCGG...GTTGGAGAGATTGACTGCATCCAGCCACTCATCATAATGGCCATTCAGAACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTCCGAGCCTACTTCGTTTAGCTTTCACAATCACTTTGACAATAGAAGGTATGGACTTTTAATCGTCTaGGGTCACATCTATTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: ISEPTSFSFHNHFDNRRYGLLIV*GHIYFL Trigger: GAGGAAATAGATGTGACCTCAGACGATTAAAAGTCC...ATACCTTCTATTGTCAAAGTGATTGTGAAAGCTAAACGAAGTAGGCTCGGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174353.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGAAGCATTTGTAACCCTCTTTAGTAAGTCTATGGTCTTGGAAGAGAAACTCGTCAGAATGTGCCTTTaGCTCACAAGGATCATTCAT | + |
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Preference number: 2 (lower is better) Translates to: KEAFVTLFSKSMVLEEKLVRMCL*LTRIIH Trigger: ATGAATGATCCTTGTGAGGCAAAGGCACATTCTGAC...GAGTTTCTCTTCCAAGACCATAGACTTACTAAAGAGGGTTACAAATGCTTCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTCCGAGCCTACTTCGTTTAGCTTTCACAATCACTTTGACAATAGAAGGTATGTCAGAATGTGCCTTTaGCTCACAAGGATCATTCAT | + |
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Preference number: 2 (lower is better) Translates to: ISEPTSFSFHNHFDNRRYVRMCL*LTRIIH Trigger: ATGAATGATCCTTGTGAGGCAAAGGCACATTCTGAC...ATACCTTCTATTGTCAAAGTGATTGTGAAAGCTAAACGAAGTAGGCTCGGAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR GCA 72 bp | CCGGTTCCCGGTCCAGTGCCCTCGCTGTCCAAAGTCTaGTGCGAGCGTCACTGCTCTGATTCCCTCTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: PVPGPVPSLSKV*CERHCSDSLSP Trigger: GGGAGAGAGGGAATCAGAGCAGTGACGCTCGCAGCAGACTTTGGACAGCGAGGGCACTGGACCGGGAACCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR GCA 72 bp | GTTCCCGGTCCAGTGCCCTCGCTGTCCAAAGTCTGCTaGGAGCGTCACTGCTCTGATTCCCTCTCTCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: VPGPVPSLSKVC*ERHCSDSLSPF Trigger: AAAGGGAGAGAGGGAATCAGAGCAGTGACGCTCGCAGCAGACTTTGGACAGCGAGGGCACTGGACCGGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR GCA 72 bp | GTGCCCTCGCTGTCCAAAGTCTGCTGCGAGCGTCACTaGTCTGATTCCCTCTCTCCCTTTCTCGGTGGATGT | + |
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Preference number: 3 (lower is better) Translates to: VPSLSKVCCERH*SDSLSPFLGGC Trigger: ACATCCACCGAGAAAGGGAGAGAGGGAATCAGAGCAGTGACGCTCGCAGCAGACTTTGGACAGCGAGGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR GCA 72 bp | TCTCTCACTCACTCAGCTGCCTCTTTAGACGAGGGTTaGATGTTGATGATCGGGCCTCCGTCCTCTGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: SLTHSAASLDEG*MLMIGPPSSAV Trigger: GACAGCAGAGGACGGAGGCCCGATCATCAACATGCAACCCTCGTCTAAAGAGGCAGCTGAGTGAGTGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCAGTCCTGCTCCCTCATTTCTCTGTCAGAGGACCACTATCTCCGAGCCTACCTCTTTAGACGAGGGTaGCATGTTGATGATCGGGCC | + |
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Preference number: 3 (lower is better) Translates to: SQSCSLISLSEDHYLRAYLFRRG*HVDDRA Trigger: GGCCCGATCATCAACATGCAACCCTCGTCTAAAGAG...GTAGGCTCGGAGATAGTGGTCCTCTGACAGAGAAATGAGGGAGCAGGACTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR CAA 90 bp | CTTGAAAACTCCCATGTCCTTGGCCACGCCACCATCACCCCATTAAATACAGTCAAAACTCCCATGTCCTaGGCCACGCCACCATCACCC | + |
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Preference number: 3 (lower is better) Translates to: LENSHVLGHATITPLNTVKTPMS*ATPPSP Trigger: GGGTGATGGTGGCGTGGCCAAGGACATGGGAGTTTT...GACTGTATTTAATGGGGTGATGGTGGCGTGGCCAAGGACATGGGAGTTTTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCAGTCCTGCTCCCTCATTTCTCTGTCAGAGGACCACTATCTCCGAGCCTACTGTCAGAATGTGCCTTaGCCTCACAAGGATCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: SQSCSLISLSEDHYLRAYCQNVP*PHKDHS Trigger: TGAATGATCCTTGTGAGGCAAAGGCACATTCTGACA...GTAGGCTCGGAGATAGTGGTCCTCTGACAGAGAAATGAGGGAGCAGGACTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| 3UTR TCA 72 bp | CGCCAATCATCTTGTTTCCCTGGTTTGGCATTTGACTaGCAGCTCCCCTTGTCAGAATGTGCCTTTGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RQSSCFPGLAFD*QLPLSECAFAS Trigger: TGAGGCAAAGGCACATTCTGACAAGGGGAGCTGTCAGTCAAATGCCAAACCAGGGAAACAAGATGATTGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| 3UTR TCA 72 bp | TACCCGCCAATCATCTTGTTTCCCTGGTTTGGCATTTaGCTGACAGCTCCCCTTGTCAGAATGTGCCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: YPPIILFPWFGI*LTAPLVRMCLC Trigger: GCAAAGGCACATTCTGACAAGGGGAGCTGTCAGTCAAATGCCAAACCAGGGAAACAAGATGATTGGCGGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| 3UTR CCA 72 bp | AGCGGAATACCCGCCAATCATCTTGTTTCCCTGGTTTaGCATTTGACTGACAGCTCCCCTTGTCAGAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: SGIPANHLVSLV*HLTDSSPCQNV Trigger: CACATTCTGACAAGGGGAGCTGTCAGTCAAATGCCAAACCAGGGAAACAAGATGATTGGCGGGTATTCCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| 3UTR-3UTR CAA 90 bp | GACACTAAGGAAGCATTTGTAACCCTCTTTAGTAAGTCTATGGTCTTGGAAGAGTCCGGACTCGCCTGCTaGGTAGCAATTCTCCACCGG | + |
|
Preference number: 3 (lower is better) Translates to: DTKEAFVTLFSKSMVLEESGLAC*VAILHR Trigger: CCGGTGGAGAATTGCTACCAAGCAGGCGAGTCCGGA...CTCTTCCAAGACCATAGACTTACTAAAGAGGGTTACAAATGCTTCCTTAGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174353.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCACGCCACCATCACCCCATTAAATACAGTCCTTCCTTCCACTTTTGCAATACTCTCCCTGTCTTTCTaGCTCTGTGCTGTCCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: GHATITPLNTVLPSTFAILSLSF*LCAVHF Trigger: AAAATGGACAGCACAGAGCAAGAAAGACAGGGAGAG...TATTGCAAAAGTGGAAGGAAGGACTGTATTTAATGGGGTGATGGTGGCGTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGACTTCGATAAGCGGAATACCCGCCAATCATCTTGTTTCCCTGGTTTGGCATGTCAGAATGTGCCTTaGCCTCACAAGGATCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: MDFDKRNTRQSSCFPGLACQNVP*PHKDHS Trigger: TGAATGATCCTTGTGAGGCAAAGGCACATTCTGACA...TGCCAAACCAGGGAAACAAGATGATTGGCGGGTATTCCGCTTATCGAAGTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCTAAATGGACTTCGATAAGCGGAATACCCGCCAATCATCTTGTTTCCCTGTCCCTGGTTTGGCATTaGACTGACAGCTCCCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ISKWTSISGIPANHLVSLSLVWH*TDSSPC Trigger: ACAAGGGGAGCTGTCAGTCAAATGCCAAACCAGGGA...CAGGGAAACAAGATGATTGGCGGGTATTCCGCTTATCGAAGTCCATTTAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGACCACTATCTCCGAGCCTACTTCGTTTAGCTTTCACAATCACTTTGACTACCCGCCAATCATCTaGTTTCCCTGGTTTGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: QRTTISEPTSFSFHNHFDYPPII*FPWFGI Trigger: AATGCCAAACCAGGGAAACAAGATGATTGGCGGGTA...GTCAAAGTGATTGTGAAAGCTAAACGAAGTAGGCTCGGAGATAGTGGTCCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| 3UTR TCA 72 bp | CATTCGCCCGACAACTGCTACATGCAATTCAAGTTTTaGAACAGGTGTAGGATGGGGCTAGACATGGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: HSPDNCYMQFKF*NRCRMGLDMEF Trigger: AAATTCCATGTCTAGCCCCATCCTACACCTGTTTCAAAACTTGAATTGCATGTAGCAGTTGTCGGGCGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| 3UTR TCA 72 bp | CATTTTTGTAGGATTGGGTTTGGACTTTTAATCGTCTaGGGTCACATCTATTTCCTCCGGACTCGCCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HFCRIGFGLLIV*GHIYFLRTRLL Trigger: AAGCAGGCGAGTCCGGAGGAAATAGATGTGACCTCAGACGATTAAAAGTCCAAACCCAATCCTACAAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174353.2 |
||
| CDS-3UTR GCA 90 bp | AAGCGGTGCCCGGCCCGGCGCCGGTTCCCGGTCCAGTGCCCTCGCTGTCCAAAGGCGGGGTTGGGCGGGTaGGAGACCGCCTCGGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KRCPARRRFPVQCPRCPKAGLGG*ETASAN Trigger: GTTCGCCGAGGCGGTCTCGCACCCGCCCAACCCCGC...CTTTGGACAGCGAGGGCACTGGACCGGGAACCGGCGCCGGGCCGGGCACCGCTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTGTCCTGTAAGCGGTGCCCGGCCCGGCGCCGGTTCCCGGTCCAGTGCCGTGCCGCGGGACGGATaGGATCCTCGGAGCGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCCPVSGARPGAGSRSSAVPRDG*DPRSAR Trigger: CCTCGCGCTCCGAGGATCCCATCCGTCCCGCGGCAC...GGCACTGGACCGGGAACCGGCGCCGGGCCGGGCACCGCTTACAGGACAGCAGAG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR CCA 90 bp | CGGCGCCGGTTCCCGGTCCAGTGCCCTCGCTGTCCAAAGTCTGCTGCGAGCGTCGCGGCGGCGGCCGAGTaGAAGCCGTTGAGGAACGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRRFPVQCPRCPKSAASVAAAAE*KPLRNG Trigger: TCCGTTCCTCAACGGCTTCCACTCGGCCGCCGCCGC...GACGCTCGCAGCAGACTTTGGACAGCGAGGGCACTGGACCGGGAACCGGCGCCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR GCA 90 bp | AGCATGAGTCCTGATTCTTCTCAGGGGCACCCTCCCCCGCCCTCCATCCCAGTCGTGGACGGGTCCCGCTaGTGCGAGGCGAAGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SMSPDSSQGHPPPPSIPVVDGSR*CEAKRG Trigger: CCCCCTCTTCGCCTCGCAGCAGCGGGACCCGTCCAC...GACTGGGATGGAGGGCGGGGGAGGGTGCCCCTGAGAAGAATCAGGACTCATGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCTGCCTCTTTAGACGAGGGTTGCATGTTGATGATCGGGCCTCCGTCCTCTGACGGGTCCCGCTGCTaGGAGGCGAAGAGGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SAASLDEGCMLMIGPPSSDGSRC*EAKRGC Trigger: ACACCCCCTCTTCGCCTCGCAGCAGCGGGACCCGTC...AGAGGACGGAGGCCCGATCATCAACATGCAACCCTCGTCTAAAGAGGCAGCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTCCTGCTCCCTCATTTCTCTGTCAGAGGACCACTATCTCCGAGCCTACTTCCAGCGACTCGATGGTaGAGCAGCGCTTGGGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PVLLPHFSVRGPLSPSLLPATRW*SSAWAP Trigger: CGGCGCCCAAGCGCTGCTTCACCATCGAGTCGCTGG...AAGTAGGCTCGGAGATAGTGGTCCTCTGACAGAGAAATGAGGGAGCAGGACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGCCTCTTTAGACGAGGGTTGCATGTTGATGATCGGGCCTCCGTCCTCTGGCGAAGAGGGGGTGTaGCGAATGCGAGGAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SAASLDEGCMLMIGPPSSGEEGV*RMRGGQ Trigger: CTGCCCTCCTCGCATTCGCCACACCCCCTCTTCGCC...AGAGGACGGAGGCCCGATCATCAACATGCAACCCTCGTCTAAAGAGGCAGCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR CCA 90 bp | GGTTCCCGGTCCAGTGCCCTCGCTGTCCAAAGTCTGCTGCGAGCGTCACTGCTCTCTAGCCTTAAAAGCTaGGACGGCGAGAAGGCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSRSSALAVQSLLRASLLSSLKS*DGEKAV Trigger: AACCGCCTTCTCGCCGTCCCAGCTTTTAAGGCTAGA...GAGCAGTGACGCTCGCAGCAGACTTTGGACAGCGAGGGCACTGGACCGGGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR TCA 90 bp | TCCCAGTCCTGCTCCCTCATTTCTCTGTCAGAGGACCACTATCTCCGAGCCTACTGGAATTGGCGTAGCTaGGTGCCGCGGGACGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SQSCSLISLSEDHYLRAYWNWRS*VPRDGW Trigger: CCATCCGTCCCGCGGCACTCAGCTACGCCAATTCCA...GTAGGCTCGGAGATAGTGGTCCTCTGACAGAGAAATGAGGGAGCAGGACTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGAAACTCAGTGCTTGAAAACTCCCATGTCCTTGGCCACGCCACCATCAGACGGGTCCCGCTGCTaGGAGGCGAAGAGGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRETQCLKTPMSLATPPSDGSRC*EAKRGC Trigger: ACACCCCCTCTTCGCCTCGCAGCAGCGGGACCCGTC...TGATGGTGGCGTGGCCAAGGACATGGGAGTTTTCAAGCACTGAGTTTCTCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACTCCCATGTCCTTGGCCACGCCACCATCACCCCATTAAATACAGTCCTTGCAGGGGACTGTCCTTaGCCACCAGCGACTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ENSHVLGHATITPLNTVLAGDCP*PPATRW Trigger: CCATCGAGTCGCTGGTGGCCAAGGACAGTCCCCTGC...AAGGACTGTATTTAATGGGGTGATGGTGGCGTGGCCAAGGACATGGGAGTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| 3UTR CAA 72 bp | CTCTCTCACTCACTCAGCTGCCTCTTTAGACGAGGGTaGCATGTTGATGATCGGGCCTCCGTCCTCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSHSLSCLFRRG*HVDDRASVLCC Trigger: ACAGCAGAGGACGGAGGCCCGATCATCAACATGCAACCCTCGTCTAAAGAGGCAGCTGAGTGAGTGAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| CDS-3UTR CCA 90 bp | GGCCACGCCACCATCACCCCATTAAATACAGTCCTTCCTTCCACTTTTGCAATAACACCAAGTCCGGGTTaGAGTAGACGCCCCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GHATITPLNTVLPSTFAITPSPG*SRRPCR Trigger: CCGGCAGGGGCGTCTACTCCAACCCGGACTTGGTGT...TATTGCAAAAGTGGAAGGAAGGACTGTATTTAATGGGGTGATGGTGGCGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR TCA 90 bp | CCGGTCCAGTGCCCTCGCTGTCCAAAGTCTGCTGCGAGCGTCACTGCTCTGATTTTCGTTCTCCGGTTCTaGAACCATACTTTTACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PVQCPRCPKSAASVTALIFVLRF*NHTFTL Trigger: CAAGGTAAAAGTATGGTTTCAGAACCGGAGAACGAA...AATCAGAGCAGTGACGCTCGCAGCAGACTTTGGACAGCGAGGGCACTGGACCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174353.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAAAACTCCCATGTCCTTGGCCACGCCACCATCACCCCATTAAATACAGTCCCGAGTGGAAGCCGTTaGGGAACGGATTTATGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LENSHVLGHATITPLNTVPSGSR*GTDLWD Trigger: GTCCCATAAATCCGTTCCTCAACGGCTTCCACTCGG...GACTGTATTTAATGGGGTGATGGTGGCGTGGCCAAGGACATGGGAGTTTTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR CCA 90 bp | GACACTAAGGAAGCATTTGTAACCCTCTTTAGTAAGTCTATGGTCTTGGAAGAGGCCAGGGGTAGAAGGTaGACGGGTCCCGCTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: DTKEAFVTLFSKSMVLEEARGRR*TGPAAA Trigger: CGCAGCAGCGGGACCCGTCCACCTTCTACCCCTGGC...CTCTTCCAAGACCATAGACTTACTAAAGAGGGTTACAAATGCTTCCTTAGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| CDS-3UTR GCA 90 bp | GGCCACGCCACCATCACCCCATTAAATACAGTCCTTCCTTCCACTTTTGCAATATCCTCCGGACTCGCCTaGTTGGTAGCAATTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GHATITPLNTVLPSTFAISSGLA*LVAILH Trigger: GTGGAGAATTGCTACCAAGCAGGCGAGTCCGGAGGA...TATTGCAAAAGTGGAAGGAAGGACTGTATTTAATGGGGTGATGGTGGCGTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCTAAATGGACTTCGATAAGCGGAATACCCGCCAATCATCTTGTTTCCCTGATTGGCGTAGCTGAGTaGCGCGGGACGGATGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ISKWTSISGIPANHLVSLIGVAE*RGTDGI Trigger: GATCCCATCCGTCCCGCGGCACTCAGCTACGCCAAT...CAGGGAAACAAGATGATTGGCGGGTATTCCGCTTATCGAAGTCCATTTAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGAAACTCAGTGCTTGAAAACTCCCATGTCCTTGGCCACGCCACCATCACTAGCTTTTGCCTTTTaGATTTCGTTCTCCGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRETQCLKTPMSLATPPSLAFAF*ISFSGS Trigger: AGAACCGGAGAACGAAATTCAAAAGGCAAAAGCTAG...TGATGGTGGCGTGGCCAAGGACATGGGAGTTTTCAAGCACTGAGTTTCTCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| 3UTR CAA 72 bp | CATTTGACTGACAGCTCCCCTTGTCAGAATGTGCCTTaGCCTCACAAGGATCATTCATTCTCTCTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLTDSSPCQNVP*PHKDHSFSLSL Trigger: GAGAGAGAGAGAGAATGAATGATCCTTGTGAGGCAAAGGCACATTCTGACAAGGGGAGCTGTCAGTCAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| CDS-3UTR GCA 90 bp | ATTATCATTTCTAAATGGACTTCGATAAGCGGAATACCCGCCAATCATCTTGTTCTGGCCAGAGCGTTGTaGAAAAGGAAACTCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IIISKWTSISGIPANHLVLARAL*KRKLSG Trigger: TCCCGAGAGTTTCCTTTTGCACAACGCTCTGGCCAG...AACAAGATGATTGGCGGGTATTCCGCTTATCGAAGTCCATTTAGAAATGATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGCATTTGTAACCCTCTTTAGTAAGTCTATGGTCTTGGAAGAGAAACTCTCCGCTTTGGCTTTCTaGCCAGAGCGTTGTGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KEAFVTLFSKSMVLEEKLSALAF*PERCAK Trigger: TTTTGCACAACGCTCTGGCCAGAAAGCCAAAGCGGA...GAGTTTCTCTTCCAAGACCATAGACTTACTAAAGAGGGTTACAAATGCTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR GCA 90 bp | ACTAAGGAAGCATTTGTAACCCTCTTTAGTAAGTCTATGGTCTTGGAAGAGAAATTCTTCTCAAAAGCGTaGTCTAGCCTTAAAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKEAFVTLFSKSMVLEEKFFSKA*SSLKSW Trigger: CCAGCTTTTAAGGCTAGAGCACGCTTTTGAGAAGAA...TTTCTCTTCCAAGACCATAGACTTACTAAAGAGGGTTACAAATGCTTCCTTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR TCA 90 bp | ATTATCATTTCTAAATGGACTTCGATAAGCGGAATACCCGCCAATCATCTTGTTAACCATACTTTTACCTaGGTTTCCGTAAGACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IIISKWTSISGIPANHLVNHTFT*VSVRLR Trigger: TCTCAGTCTTACGGAAACTCAGGTAAAAGTATGGTT...AACAAGATGATTGGCGGGTATTCCGCTTATCGAAGTCCATTTAGAAATGATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS CCA 90 bp | CCAGGGCGTGCGGCGGCGGCACCGGGTGCACCGGCACGGCGGGGTTaGGCGGGTGCGAGACCGCCTCGGCGAACACCAAGTCCGGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGRAAAAPGAPARRG*AGARPPRRTPSPGW Trigger: CCAACCCGGACTTGGTGTTCGCCGAGGCGGTCTCGCACCCGCCCAACCCCGCCGTGCCGGTGCACCCGGTGCCGCCGCCGCACGCCCTGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS CCA 90 bp | GGTTGGGCGGGTGCGAGACCGCCTCGGCGAACACCAAGTCCGGGTTaGAGTAGACGCCCCTGCCGGCGGCGGCGGCGGCGGCGGCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GWAGARPPRRTPSPG*SRRPCRRRRRRRPS Trigger: ACTCGGCCGCCGCCGCCGCCGCCGCCGGCAGGGGCGTCTACTCCAACCCGGACTTGGTGTTCGCCGAGGCGGTCTCGCACCCGCCCAACC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS CCA 90 bp | GTAGAAGGTGGACGGGTCCCGCTGCTGCGAGGCGAAGAGGGGGTGTaGCGAATGCGAGGAGGGCAGGGGGTGGGCGGCCAGGGCGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VEGGRVPLLRGEEGV*RMRGGQGVGGQGVR Trigger: CCGCACGCCCTGGCCGCCCACCCCCTGCCCTCCTCGCATTCGCCACACCCCCTCTTCGCCTCGCAGCAGCGGGACCCGTCCACCTTCTAC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS GCA 90 bp | GCCGTTGAGGAACGGATTTATGGGACTGGAATTGGCGTAGCTGAGTaGCGCGGGACGGATGGGATCCTCGGAGCGCGAGGCAGGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AVEERIYGTGIGVAE*RGTDGILGARGRQG Trigger: CCCCTGCCTGCCTCGCGCTCCGAGGATCCCATCCGTCCCGCGGCACTCAGCTACGCCAATTCCAGTCCCATAAATCCGTTCCTCAACGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS TCA 90 bp | TGTCGTTCCCTTGGAAGCGATGACCCAGATATCGGTAGCGGTGGATaGGCCAGGGGTAGAAGGTGGACGGGTCCCGCTGCTGCGAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: CRSLGSDDPDIGSGG*ARGRRWTGPAAARR Trigger: TCGCCTCGCAGCAGCGGGACCCGTCCACCTTCTACCCCTGGCTCATCCACCGCTACCGATATCTGGGTCATCGCTTCCAAGGGAACGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS TCA 90 bp | TACTTTTACCTTGGAAGCGATGACCCAGATATCGGTAGCGGTGGATaGGCCAGGGGTAGAAGGTGGACGGGTCCCGCTGCTGCGAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: YFYLGSDDPDIGSGG*ARGRRWTGPAAARR Trigger: TCGCCTCGCAGCAGCGGGACCCGTCCACCTTCTACCCCTGGCTCATCCACCGCTACCGATATCTGGGTCATCGCTTCCAAGGTAAAAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174353.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCTGCCTCTTTAGACGAGGGTTGCATGTTGATGATCGGGCCTCCGTCCTCTGGAAACTCTCGGGACTaGTGTCGTTCCCTTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SAASLDEGCMLMIGPPSSGNSRD*CRSLGS Trigger: GCTTCCAAGGGAACGACACAAGTCCCGAGAGTTTCC...AGAGGACGGAGGCCCGATCATCAACATGCAACCCTCGTCTAAAGAGGCAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR CAA 90 bp | GGTTCCCGGTCCAGTGCCCTCGCTGTCCAAAGTCTGCTGCGAGCGTCACTGCTCTCTAGCTTTTGCCTTTaGAATTTCGTTCTCCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSRSSALAVQSLLRASLLSSFCL*NFVLRF Trigger: GAACCGGAGAACGAAATTCAAAAGGCAAAAGCTAGA...GAGCAGTGACGCTCGCAGCAGACTTTGGACAGCGAGGGCACTGGACCGGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
||
| CDS GCA 90 bp | GAGAAGGCGGTTCGAATCCGCTTTGGCTTTCTGGCCAGAGCGTTGTaGAAAAGGAAACTCTCGGGACTTGTGTCGTTCCCTTGGAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: EKAVRIRFGFLARAL*KRKLSGLVSFPWKR Trigger: TCGCTTCCAAGGGAACGACACAAGTCCCGAGAGTTTCCTTTTGCACAACGCTCTGGCCAGAAAGCCAAAGCGGATTCGAACCGCCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR CAA 90 bp | ATTTCTAAATGGACTTCGATAAGCGGAATACCCGCCAATCATCTTGTTTCCCTGGGCAGGGGACTGTCCTaGGCCACCAGCGACTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: ISKWTSISGIPANHLVSLGRGLS*ATSDSM Trigger: CATCGAGTCGCTGGTGGCCAAGGACAGTCCCCTGCC...CAGGGAAACAAGATGATTGGCGGGTATTCCGCTTATCGAAGTCCATTTAGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCTGAATGGCCATTATGATGAGTGGCTGGATGCAGTCAATCTCTCCAACTCCGGACTCGCCTGCTaGGTAGCAATTCTCCACCGG | + |
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Preference number: 5 (lower is better) Translates to: KVLNGHYDEWLDAVNLSNSGLAC*VAILHR Trigger: CCGGTGGAGAATTGCTACCAAGCAGGCGAGTCCGGA...GTTGGAGAGATTGACTGCATCCAGCCACTCATCATAATGGCCATTCAGAACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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| CDS-3UTR CAA 90 bp | GTCTCTCTCACTCACTCAGCTGCCTCTTTAGACGAGGGTTGCATGTTGATGATCAACCATACTTTTACCTaGGAAGCGATGACCCAGATA | + |
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Preference number: 5 (lower is better) Translates to: VSLTHSAASLDEGCMLMINHTFT*EAMTQI Trigger: TATCTGGGTCATCGCTTCCAAGGTAAAAGTATGGTT...GATCATCAACATGCAACCCTCGTCTAAAGAGGCAGCTGAGTGAGTGAGAGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174353.2 |
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| CDS-3UTR CAA 90 bp | GGCCACGCCACCATCACCCCATTAAATACAGTCCTTCCTTCCACTTTTGCAATATCTAGCTTTTGCCTTTaGAATTTCGTTCTCCGGTTC | + |
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Preference number: 5 (lower is better) Translates to: GHATITPLNTVLPSTFAISSFCL*NFVLRF Trigger: GAACCGGAGAACGAAATTCAAAAGGCAAAAGCTAGA...TATTGCAAAAGTGGAAGGAAGGACTGTATTTAATGGGGTGATGGTGGCGTGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| CDS-3UTR CAA 90 bp | ACTAAGGAAGCATTTGTAACCCTCTTTAGTAAGTCTATGGTCTTGGAAGAGAAAGCCGAGTGGAAGCCGTaGAGGAACGGATTTATGGGA | + |
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Preference number: 5 (lower is better) Translates to: TKEAFVTLFSKSMVLEEKAEWKP*RNGFMG Trigger: TCCCATAAATCCGTTCCTCAACGGCTTCCACTCGGC...TTTCTCTTCCAAGACCATAGACTTACTAAAGAGGGTTACAAATGCTTCCTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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| CDS-3UTR CAA 90 bp | AATTCAGTTTTTAGACACCATTCGCCCGACAACTGCTACATGCAATTCAAGTTTACTTGTGTCGTTCCCTaGGAAGCGATGACCCAGATA | + |
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Preference number: 5 (lower is better) Translates to: NSVFRHHSPDNCYMQFKFTCVVP*EAMTQI Trigger: TATCTGGGTCATCGCTTCCAAGGGAACGACACAAGT...AAACTTGAATTGCATGTAGCAGTTGTCGGGCGAATGGTGTCTAAAAACTGAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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| CDS-3UTR CAA 90 bp | AATTCAGTTTTTAGACACCATTCGCCCGACAACTGCTACATGCAATTCAAGTTTTTTCTGGCCAGAGCGTaGTGCAAAAGGAAACTCTCG | + |
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Preference number: 5 (lower is better) Translates to: NSVFRHHSPDNCYMQFKFFLARA*CKRKLS Trigger: CGAGAGTTTCCTTTTGCACAACGCTCTGGCCAGAAA...AAACTTGAATTGCATGTAGCAGTTGTCGGGCGAATGGTGTCTAAAAACTGAATT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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| CDS CAA 90 bp | GCCAGGGCGTGCGGCGGCGGCACCGGGTGCACCGGCACGGCGGGGTaGGGCGGGTGCGAGACCGCCTCGGCGAACACCAAGTCCGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: ARACGGGTGCTGTAG*GGCETASANTKSGL Trigger: CAACCCGGACTTGGTGTTCGCCGAGGCGGTCTCGCACCCGCCCAACCCCGCCGTGCCGGTGCACCCGGTGCCGCCGCCGCACGCCCTGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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| CDS CCA 72 bp | GCGGCGGCGGCACCGGGTGCACCGGCACGGCGGGGTTaGGCGGGTGCGAGACCGCCTCGGCGAACACCAAGT | + |
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Preference number: 6 (lower is better) Translates to: AAAAPGAPARRG*AGARPPRRTPS Trigger: ACTTGGTGTTCGCCGAGGCGGTCTCGCACCCGCCCAACCCCGCCGTGCCGGTGCACCCGGTGCCGCCGCCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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| CDS CAA 72 bp | TGCGGCGGCGGCACCGGGTGCACCGGCACGGCGGGGTaGGGCGGGTGCGAGACCGCCTCGGCGAACACCAAG | + |
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Preference number: 6 (lower is better) Translates to: CGGGTGCTGTAG*GGCETASANTK Trigger: CTTGGTGTTCGCCGAGGCGGTCTCGCACCCGCCCAACCCCGCCGTGCCGGTGCACCCGGTGCCGCCGCCGCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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| CDS CCA 72 bp | GGTGCGAGACCGCCTCGGCGAACACCAAGTCCGGGTTaGAGTAGACGCCCCTGCCGGCGGCGGCGGCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: GARPPRRTPSPG*SRRPCRRRRRR Trigger: CCGCCGCCGCCGCCGCCGGCAGGGGCGTCTACTCCAACCCGGACTTGGTGTTCGCCGAGGCGGTCTCGCACC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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| CDS GCA 72 bp | GGCACCGGGTGCACCGGCACGGCGGGGTTGGGCGGGTaGGAGACCGCCTCGGCGAACACCAAGTCCGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: GTGCTGTAGLGG*ETASANTKSGL Trigger: CAACCCGGACTTGGTGTTCGCCGAGGCGGTCTCGCACCCGCCCAACCCCGCCGTGCCGGTGCACCCGGTGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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| CDS CCA 72 bp | ACGCCCCTGCCGGCGGCGGCGGCGGCGGCGGCCGAGTaGAAGCCGTTGAGGAACGGATTTATGGGACTGGAA | + |
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Preference number: 6 (lower is better) Translates to: TPLPAAAAAAAE*KPLRNGFMGLE Trigger: TTCCAGTCCCATAAATCCGTTCCTCAACGGCTTCCACTCGGCCGCCGCCGCCGCCGCCGCCGGCAGGGGCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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| CDS TCA 72 bp | CGGCGGCGGCGGCGGCGGCGGCCGAGTGGAAGCCGTTaGGGAACGGATTTATGGGACTGGAATTGGCGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RRRRRRRPSGSR*GTDLWDWNWRS Trigger: GCTACGCCAATTCCAGTCCCATAAATCCGTTCCTCAACGGCTTCCACTCGGCCGCCGCCGCCGCCGCCGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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| CDS GCA 72 bp | GAACGGATTTATGGGACTGGAATTGGCGTAGCTGAGTaGCGCGGGACGGATGGGATCCTCGGAGCGCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: ERIYGTGIGVAE*RGTDGILGARG Trigger: GCCTCGCGCTCCGAGGATCCCATCCGTCCCGCGGCACTCAGCTACGCCAATTCCAGTCCCATAAATCCGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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| CDS TCA 72 bp | CTTGGAAGCGATGACCCAGATATCGGTAGCGGTGGATaGGCCAGGGGTAGAAGGTGGACGGGTCCCGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LGSDDPDIGSGG*ARGRRWTGPAA Trigger: AGCAGCGGGACCCGTCCACCTTCTACCCCTGGCTCATCCACCGCTACCGATATCTGGGTCATCGCTTCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062216.4 ENSMUST00000174353.2 |
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| CDS CAA 72 bp | GCGGTTCGAATCCGCTTTGGCTTTCTGGCCAGAGCGTaGTGCAAAAGGAAACTCTCGGGACTTGTGTCGTTC | + |
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Preference number: 6 (lower is better) Translates to: AVRIRFGFLARA*CKRKLSGLVSF Trigger: GAACGACACAAGTCCCGAGAGTTTCCTTTTGCACAACGCTCTGGCCAGAAAGCCAAAGCGGATTCGAACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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| CDS GCA 72 bp | GTTCGAATCCGCTTTGGCTTTCTGGCCAGAGCGTTGTaGAAAAGGAAACTCTCGGGACTTGTGTCGTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: VRIRFGFLARAL*KRKLSGLVSFP Trigger: AGGGAACGACACAAGTCCCGAGAGTTTCCTTTTGCACAACGCTCTGGCCAGAAAGCCAAAGCGGATTCGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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| CDS GCA 72 bp | TCGTCTGAGGTCACATCTATTTCCTCCGGACTCGCCTaGTTGGTAGCAATTCTCCACCGGTTAATGTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: SSEVTSISSGLA*LVAILHRLMWC Trigger: ACACCACATTAACCGGTGGAGAATTGCTACCAAGCAGGCGAGTCCGGAGGAAATAGATGTGACCTCAGACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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| CDS CAA 72 bp | TCTGAGGTCACATCTATTTCCTCCGGACTCGCCTGCTaGGTAGCAATTCTCCACCGGTTAATGTGGTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SEVTSISSGLAC*VAILHRLMWCV Trigger: GACACACCACATTAACCGGTGGAGAATTGCTACCAAGCAGGCGAGTCCGGAGGAAATAGATGTGACCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062216.4 |
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