Pregenerated sensors for EMID1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034164Ensembl transcript IDs: ENSMUST00000062821.13, ENSMUST00000132328.8, ENSMUST00000151906.8, ENSMUST00000153308.2, ENSMUST00000156492.2, ENSMUST00000163299.8
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGGGCCTaGGGTAGAGCTGATATAAGAAGCACCGACCGTTCAGTTAGATTA | + |
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Preference number: 1 (lower is better) Translates to: PCTHPIPTEDMGAGA*GRADIRSTDRSVRL Trigger: TAATCTAACTGAACGGTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR TCA 90 bp | ACATTTCCCTTCCTTCTGTGGTCAATAGGACAAAGCCAAAACCTTTaGCAGGAGGGACCGTGGAAGTGGAGAAGCAGTCTGGCTGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: TFPFLLWSIGQSQNL*QEGPWKWRSSLAGS Trigger: TGACCCAGCCAGACTGCTTCTCCACTTCCACGGTCCCTCCTGTCAAAGGTTTTGGCTTTGTCCTATTGACCACAGAAGGAAGGGAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153308.2 |
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| 3UTR GCA 90 bp | CGGATCCCAAGTCTGGTTCTAAGGTCCCTTTCTGTTTTAGGTAGATaGTTTCTTCACATTTCCCTTCCTTCTGTGGTCAATAGGACAAAG | + |
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Preference number: 1 (lower is better) Translates to: RIPSLVLRSLSVLGR*FLHISLPSVVNRTK Trigger: CTTTGTCCTATTGACCACAGAAGGAAGGGAAATGTGAAGAAAGCATCTACCTAAAACAGAAAGGGACCTTAGAACCAGACTTGGGATCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153308.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGGACATGGGAGCAGGGGCCTGGGGTAGAGCTGATATAAGAAGCACCGACGGTGTCCTCCCCTCTTaGCTCGAAGGAGGCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: TEDMGAGAWGRADIRSTDGVLPS*LEGGWG Trigger: CCCCCAGCCTCCTTCGAGGCAAGAGGGGAGGACACC...GTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151906.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCCGCCCCAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTAACTGGTGCAAGTGAGGCCTaGCTTTTTGAGGCCCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: LPPQSLHICRARRSQVLTGASEA*LFEAQS Trigger: GGACTGGGCCTCAAAAAGTCAGGCCTCACTTGCACC...AGTTAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTGGGGCGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGGACATGGGAGCAGGGGCCTGGGGTAGAGCTGATATAAGAAGCACCGACTGCCTCGAAGGAGGCTaGGGGTACCTGTGCCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: TEDMGAGAWGRADIRSTDCLEGG*GYLCHQ Trigger: CTGATGGCACAGGTACCCCCAGCCTCCTTCGAGGCA...GTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151906.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGGACATGGGAGCAGGGGCCTGGGGTAGAGCTGATATAAGAAGCACCGACGGTGCAAGTGAGGCCTaGCTTTTTGAGGCCCAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TEDMGAGAWGRADIRSTDGASEA*LFEAQS Trigger: GGACTGGGCCTCAAAAAGTCAGGCCTCACTTGCACC...GTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGACATGGGAGCAGGGGCCTGGGGTAGAGCTGATATAAGAAGCACCGACCGTATAGGCTGCCATCACTaGGATCTGCCTACCCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: EDMGAGAWGRADIRSTDRIGCHH*DLPTPK Trigger: CTTAGGGGTAGGCAGATCTCAGTGATGGCAGCCTAT...ACGGTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGACTCAGGTGGGAACTCAGCACCAGAAAACAAGGGGCACACAGGACTCCCATAGGCTGCCATCACTaGGATCTGCCTACCCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: PGLRWELSTRKQGAHRTPIGCHH*DLPTPK Trigger: CTTAGGGGTAGGCAGATCTCAGTGATGGCAGCCTAT...GGGAGTCCTGTGTGCCCCTTGTTTTCTGGTGCTGAGTTCCCACCTGAGTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTGGGGGTACCTGTGCCATCAGGGCCTGCCCCGGATCCCAAGTCTGGTTCTATTTCCCTTCCTTCTGTaGTCAATAGGACAAAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: GWGYLCHQGLPRIPSLVLFPFLL*SIGQSQ Trigger: TTGGCTTTGTCCTATTGACCACAGAAGGAAGGGAAA...TAGAACCAGACTTGGGATCCGGGGCAGGCCCTGATGGCACAGGTACCCCCAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153308.2 |
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| 3UTR CAA 90 bp | CACAGAGGGAACCAACCAGGCCGGGTGCAAGTGAGGCCTGACTTTTaGAGGCCCAGTCCCTGTTTAGTCTGTCATGTTATAGGCTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: HRGNQPGRVQVRPDF*RPSPCLVCHVIGCH Trigger: ATGGCAGCCTATAACATGACAGACTAAACAGGGACTGGGCCTCAAAAAGTCAGGCCTCACTTGCACCCGGCCTGGTTGGTTCCCTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR CAA 90 bp | CACATTTCCCTTCCTTCTGTGGTCAATAGGACAAAGCCAAAACCTTaGACAGGAGGGACCGTGGAAGTGGAGAAGCAGTCTGGCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: HISLPSVVNRTKPKP*TGGTVEVEKQSGWV Trigger: GACCCAGCCAGACTGCTTCTCCACTTCCACGGTCCCTCCTGTCAAAGGTTTTGGCTTTGTCCTATTGACCACAGAAGGAAGGGAAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153308.2 |
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| 3UTR-3UTR TCA 90 bp | CATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGTAGGCGTCCCTTGTACAATAGGCTGCCATCACTaGGATCTGCCTACCCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: HIDSWHLQQTLGVGVPCTIGCHH*DLPTPK Trigger: CTTAGGGGTAGGCAGATCTCAGTGATGGCAGCCTAT...TGTACAAGGGACGCCTACTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGGTAGAGCTGATATAAGAAGCACCGACCGTTCAGTTAGATTAAGCAGCCTGGATCGGGTAGTTGGTTaGGTGTCCTCCCCTCTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: WGRADIRSTDRSVRLSSLDRVVG*VSSPLA Trigger: GGCAAGAGGGGAGGACACCCAACCAACTACCCGATC...CAGGCTGCTTAATCTAACTGAACGGTCGGTGCTTCTTATATCAGCTCTACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151906.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGTTAGATTAAGCAGCCTGGACTCAGGTGGGAACTCAGCACCAGAAAACAAGATGGGAGCAGGGGCCTaGGGTAGAGCTGATATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SVRLSSLDSGGNSAPENKMGAGA*GRADIR Trigger: TCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCAT...CTTGTTTTCTGGTGCTGAGTTCCCACCTGAGTCCAGGCTGCTTAATCTAACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR CCA 72 bp | GCTGCGTCTCCTGGGGGTGATGATCGGGTAGTTGGTTaGGTGTCCTCCCCTCTTGCCTCGAAGGAGGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: AASPGGDDRVVG*VSSPLASKEAG Trigger: CCCAGCCTCCTTCGAGGCAAGAGGGGAGGACACCCAACCAACTACCCGATCATCACCCCCAGGAGACGCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151906.8 |
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| 3UTR-3UTR CAA 90 bp | CATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGTAGGCGTCCCTTGTACAGGGTGTCCTCCCCTCTaGCCTCGAAGGAGGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: HIDSWHLQQTLGVGVPCTGCPPL*PRRRLG Trigger: CCCCAGCCTCCTTCGAGGCAAGAGGGGAGGACACCC...TGTACAAGGGACGCCTACTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151906.8 |
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| 3UTR TCA 72 bp | CAGAGGGAACCAACCAGGCCGGGTGCAAGTGAGGCCTaGCTTTTTGAGGCCCAGTCCCTGTTTAGTCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: QREPTRPGASEA*LFEAQSLFSLS Trigger: TGACAGACTAAACAGGGACTGGGCCTCAAAAAGTCAGGCCTCACTTGCACCCGGCCTGGTTGGTTCCCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR CCA 72 bp | ACCAAGGGATCCCTGAGGGTATTAATAAATAGGACCTaGCAGTCCCGGAGGCAGCGGGTCAGGTCCAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: TKGSLRVLINRT*QSRRQRVRSRL Trigger: TAGCCTGGACCTGACCCGCTGCCTCCGGGACTGCCAGGTCCTATTTATTAATACCCTCAGGGATCCCTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR CCA 72 bp | CATCCCATTCCCACAGAGGACATGGGAGCAGGGGCCTaGGGTAGAGCTGATATAAGAAGCACCGACCGTTCA | + |
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Preference number: 3 (lower is better) Translates to: HPIPTEDMGAGA*GRADIRSTDRS Trigger: TGAACGGTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTCTGTGGGAATGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR-3UTR CAA 90 bp | AGCACCGACCGTTCAGTTAGATTAAGCAGCCTGGACTCAGGTGGGAACTCAGCATGGAGTAGGCGTCCCTaGTACACATCCCATTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: STDRSVRLSSLDSGGNSAWSRRP*YTSHSH Trigger: GTGGGAATGGGATGTGTACAAGGGACGCCTACTCCA...TGCTGAGTTCCCACCTGAGTCCAGGCTGCTTAATCTAACTGAACGGTCGGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR TCA 72 bp | CCCTGTTTAGTCTGTCATGTTATAGGCTGCCATCACTaGGATCTGCCTACCCCTAAGACCAAGGGATCCCTG | + |
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Preference number: 3 (lower is better) Translates to: PCLVCHVIGCHH*DLPTPKTKGSL Trigger: CAGGGATCCCTTGGTCTTAGGGGTAGGCAGATCTCAGTGATGGCAGCCTATAACATGACAGACTAAACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR TCA 72 bp | TTCCTTCTGTGGTCAATAGGACAAAGCCAAAACCTTTaGCAGGAGGGACCGTGGAAGTGGAGAAGCAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: FLLWSIGQSQNL*QEGPWKWRSSL Trigger: CAGACTGCTTCTCCACTTCCACGGTCCCTCCTGTCAAAGGTTTTGGCTTTGTCCTATTGACCACAGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153308.2 |
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| 3UTR CCA 72 bp | AGCAGGGATGTTTATTGTCCTGTACATATTGACTCGTaGCATCTGCAGCAGACACTTGGAGTAGGCGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: SRDVYCPVHIDS*HLQQTLGVGVP Trigger: AGGGACGCCTACTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAACATCCCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR TCA 72 bp | AGGGTCAAGCAGGGATGTTTATTGTCCTGTACATATTaGCTCGTGGCATCTGCAGCAGACACTTGGAGTAGG | + |
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Preference number: 3 (lower is better) Translates to: RVKQGCLLSCTY*LVASAADTWSR Trigger: CCTACTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAACATCCCTGCTTGACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | GTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGGGCCCGCTGTCCGTCCACGTaGGCTCCAGGAGGCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: VGVPCTHPIPTEDMGAGARCPST*APGGQG Trigger: CCCCTGGCCTCCTGGAGCCCACGTGGACGGACAGCG...GGCCCCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | CTTCCGCCCCAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTAACTAGGACCCATGGGCCCTaGGGGGCCTGGAGGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: LPPQSLHICRARRSQVLTRTHGP*GAWRTW Trigger: CCAGGTCCTCCAGGCCCCCCAGGGCCCATGGGTCCT...AGTTAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTGGGGCGGAAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR GCA 90 bp | CTGCTCTGTCACACTCAGCACCGCCACCTCACTGAGACTGGGTCTCATGGGAGGCTGCCATCCGCCGCATaGCGCTGTCCGTCCACGTGG | + |
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Preference number: 4 (lower is better) Translates to: LLCHTQHRHLTETGSHGRLPSAA*RCPSTW Trigger: CCACGTGGACGGACAGCGGCATGCGGCGGATGGCAG...CCTCCCATGAGACCCAGTCTCAGTGAGGTGGCGGTGCTGAGTGTGACAGAGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156492.2 |
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| CDS-3UTR CCA 90 bp | CTTCCGCCCCAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTAACTCTCCCTTGGGGCCTGTaGGCCCAGGAAGCCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LPPQSLHICRARRSQVLTLPWGL*AQEAPK Trigger: CTTGGGGGCTTCCTGGGCCCACAGGCCCCAAGGGAG...AGTTAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTGGGGCGGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | CCTGGACTCAGGTGGGAACTCAGCACCAGAAAACAAGGGGCACACAGGACTCCCTGGCCCTACAGGGGCTaGAGGCCCTGGGGGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PGLRWELSTRKQGAHRTPWPYRG*RPWGSR Trigger: CCTGGACCCCCAGGGCCTCCAGCCCCTGTAGGGCCA...GGGAGTCCTGTGTGCCCCTTGTTTTCTGGTGCTGAGTTCCCACCTGAGTCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | CTTCCGCCCCAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTAACTGGCCCAGTGGGTCCTTaGGGCCAGTGGCTGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: LPPQSLHICRARRSQVLTGPVGP*GQWLPI Trigger: GATGGGCAGCCACTGGCCCCAAGGACCCACTGGGCC...AGTTAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTGGGGCGGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | GAGGACATGGGAGCAGGGGCCTGGGGTAGAGCTGATATAAGAAGCACCGACCGTGACCTGGGGGCCCAGTaGGTCCTTGGGGCCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: EDMGAGAWGRADIRSTDRDLGAQ*VLGASG Trigger: GCCACTGGCCCCAAGGACCCACTGGGCCCCCAGGTC...ACGGTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | CACTGTCTGCTCTGTCACACTCAGCACCGCCACCTCACTGAGACTGGGTCTCATCGCTGTCCGTCCACGTaGGCTCCAGGAGGCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: HCLLCHTQHRHLTETGSHRCPST*APGGQG Trigger: CCCCTGGCCTCCTGGAGCCCACGTGGACGGACAGCG...ATGAGACCCAGTCTCAGTGAGGTGGCGGTGCTGAGTGTGACAGAGCAGACAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156492.2 |
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| CDS-3UTR CCA 90 bp | CCTGGACTCAGGTGGGAACTCAGCACCAGAAAACAAGGGGCACACAGGACTCCCCTCCCTTGGGGCCTGTaGGCCCAGGAAGCCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: PGLRWELSTRKQGAHRTPLPWGL*AQEAPK Trigger: CTTGGGGGCTTCCTGGGCCCACAGGCCCCAAGGGAG...GGGAGTCCTGTGTGCCCCTTGTTTTCTGGTGCTGAGTTCCCACCTGAGTCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | GTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGGGCCTCCTGGGGGTCCCTGTaGGCCTGGCGGGCCTCTAAT | + |
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Preference number: 4 (lower is better) Translates to: VGVPCTHPIPTEDMGAGASWGSL*AWRASN Trigger: ATTAGAGGCCCGCCAGGCCCACAGGGACCCCCAGGA...GGCCCCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | GTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGGGCCGACCTGGCCATAGGGTaGCCCTACAGGGGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VGVPCTHPIPTEDMGAGADLAIG*PYRGWR Trigger: CCTCCAGCCCCTGTAGGGCCACCCTATGGCCAGGTC...GGCCCCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | TGGAGTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGGACCTGGGGGCCCAGTaGGTCCTTGGGGCCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: WSRRPLYTSHSHRGHGSRDLGAQ*VLGASG Trigger: GCCACTGGCCCCAAGGACCCACTGGGCCCCCAGGTC...CCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTACTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR TCA 90 bp | CTCTGTCACACTCAGCACCGCCACCTCACTGAGACTGGGTCTCATGGGAGGGGGGCAGTTGAGACAACCTaGGAGGGCTGTGGGCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LCHTQHRHLTETGSHGRGAVETT*EGCGPH Trigger: GTGAGGCCCACAGCCCTCTCAGGTTGTCTCAACTGC...CCCCCTCCCATGAGACCCAGTCTCAGTGAGGTGGCGGTGCTGAGTGTGACAGAG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000156492.2 |
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| CDS-3UTR GCA 90 bp | ACAGAGGACATGGGAGCAGGGGCCTGGGGTAGAGCTGATATAAGAAGCACCGACCTGCCATCCGCCGCATaGCGCTGTCCGTCCACGTGG | + |
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Preference number: 4 (lower is better) Translates to: TEDMGAGAWGRADIRSTDLPSAA*RCPSTW Trigger: CCACGTGGACGGACAGCGGCATGCGGCGGATGGCAG...GTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR GCA 90 bp | GGAGTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGGGGTGTCCTCCCCTCTTaGCTCGAAGGAGGCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GVGVPCTHPIPTEDMGAGGVLPS*LEGGWG Trigger: CCCCCAGCCTCCTTCGAGGCAAGAGGGGAGGACACC...CCCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTACTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | CTTCCGCCCCAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTAACTCAGAGTCCTCAGGGGTaGCTGGGACTGAGGGCACTG | + |
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Preference number: 4 (lower is better) Translates to: LPPQSLHICRARRSQVLTQSPQG*LGLRAL Trigger: CAGTGCCCTCAGTCCCAGCCACCCCTGAGGACTCTG...AGTTAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTGGGGCGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | CTTGGAGTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCATTGGCCAGGGCGTCCTaGGGGTCCCTGTGGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LGVGVPCTHPIPTEDMGALARAS*GSLWAW Trigger: CCAGGCCCACAGGGACCCCCAGGACGCCCTGGCCAA...TGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTACTCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | GTATTAATAAATAGGACCTGGCAGTCCCGGAGGCAGCGGGTCAGGTCCAGGCTATGGCCCTACAGGGGCTaGAGGCCCTGGGGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLINRTWQSRRQRVRSRLWPYRG*RPWGSR Trigger: CCTGGACCCCCAGGGCCTCCAGCCCCTGTAGGGCCA...TAGCCTGGACCTGACCCGCTGCCTCCGGGACTGCCAGGTCCTATTTATTAATAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGGGACCTGGCCATAGGGTaGCCCTACAGGGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGVPCTHPIPTEDMGAGDLAIG*PYRGWR Trigger: CCTCCAGCCCCTGTAGGGCCACCCTATGGCCAGGTC...CCCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTACTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | GTATTAATAAATAGGACCTGGCAGTCCCGGAGGCAGCGGGTCAGGTCCAGGCTAGACCTGGGGGCCCAGTaGGTCCTTGGGGCCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLINRTWQSRRQRVRSRLDLGAQ*VLGASG Trigger: GCCACTGGCCCCAAGGACCCACTGGGCCCCCAGGTC...TAGCCTGGACCTGACCCGCTGCCTCCGGGACTGCCAGGTCCTATTTATTAATAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR TCA 90 bp | GAGGACATGGGAGCAGGGGCCTGGGGTAGAGCTGATATAAGAAGCACCGACCGTTGGCTTCCAGCAGTGTaGCCCGTCTGGCCAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EDMGAGAWGRADIRSTDRWLPAV*PVWPGA Trigger: AGCTCCTGGCCAGACGGGTCACACTGCTGGAAGCCA...ACGGTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132328.8 ENSMUST00000151906.8 |
||
| CDS-3UTR GCA 90 bp | AGACTTCCGCCCCAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTACTTTCCAGGGGTGCCTaGAGCTCCTGTTTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLPPQSLHICRARRSQVLLSRGA*SSCLAR Trigger: CCTGGCCAAACAGGAGCTGCAGGCACCCCTGGAAAG...TAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTGGGGCGGAAGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR GCA 90 bp | CAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTAACTTTAGGCAGCGGTGTCCTCCCCTCTTaGCTCGAAGGAGGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSLHICRARRSQVLTLGSGVLPS*LEGGWG Trigger: CCCCCAGCCTCCTTCGAGGCAAGAGGGGAGGACACC...GCTGCCTAAAGTTAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | TCAAAGCCTTTTCACCCCATTTCACAGAGGGAACCAACCAGGCCGGGTGCAAGTCGCTGTCCGTCCACGTaGGCTCCAGGAGGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SKPFHPISQREPTRPGASRCPST*APGGQG Trigger: CCCCTGGCCTCCTGGAGCCCACGTGGACGGACAGCG...ACTTGCACCCGGCCTGGTTGGTTCCCTCTGTGAAATGGGGTGAAAAGGCTTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAGGACATGGGAGCAGGGGCCTGGGGTAGAGCTGATATAAGAAGCACCGACTGTCGGTGCCTCCCTTaGGGCCTGTGGGCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEDMGAGAWGRADIRSTDCRCLP*GLWAQE Trigger: TTCCTGGGCCCACAGGCCCCAAGGGAGGCACCGACA...GTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGTGTCGGTGCCTCCCTTaGGGCCTGTGGGCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WSRRPLYTSHSHRGHGSRCRCLP*GLWAQE Trigger: TTCCTGGGCCCACAGGCCCCAAGGGAGGCACCGACA...CCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTACTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCGCCCCAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTAACTGCCTCTAATCCTCACTaGGCTCTGGCTGTCGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPPQSLHICRARRSQVLTASNPH*ALAVGA Trigger: GGCACCGACAGCCAGAGCCCAGTGAGGATTAGAGGC...AGTTAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTGGGGCGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGCCTGCAGCTCCTGTTTaGCCAGGGCGTCCTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WSRRPLYTSHSHRGHGSRPAAPV*PGRPGG Trigger: ACCCCCAGGACGCCCTGGCCAAACAGGAGCTGCAGG...CCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTACTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | TCAAAGCCTTTTCACCCCATTTCACAGAGGGAACCAACCAGGCCGGGTGCAAGTTGGCCCTACAGGGGCTaGAGGCCCTGGGGGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKPFHPISQREPTRPGASWPYRG*RPWGSR Trigger: CCTGGACCCCCAGGGCCTCCAGCCCCTGTAGGGCCA...ACTTGCACCCGGCCTGGTTGGTTCCCTCTGTGAAATGGGGTGAAAAGGCTTTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGGGCCGGTCCTTGGGGCCAGTaGCTGCCCATCTCAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VGVPCTHPIPTEDMGAGAGPWGQ*LPISVK Trigger: CTTCACTGAGATGGGCAGCCACTGGCCCCAAGGACC...GGCCCCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | AGACTTCCGCCCCAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTAGGTCCTTGGGGCCAGTaGCTGCCCATCTCAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLPPQSLHICRARRSQVLGPWGQ*LPISVK Trigger: CTTCACTGAGATGGGCAGCCACTGGCCCCAAGGACC...TAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTGGGGCGGAAGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGGGCCGGCCAGAGGTTCCTTTaGGTCCAGAAGGGCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGVPCTHPIPTEDMGAGAGQRFL*VQKGLG Trigger: TCCCAGGCCCTTCTGGACCCAAAGGAACCTCTGGCC...GGCCCCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| CDS-3UTR TCA 90 bp | ACTGAGGGCACTGTCTGCTCTGTCACACTCAGCACCGCCACCTCACTGAGACTGCTCACAGGTCACCCCTaGATGTCCAGGGCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TEGTVCSVTLSTATSLRLLTGHP*MSRAAP Trigger: AGGTGCTGCCCTGGACATTCAGGGGTGACCTGTGAG...CAGTCTCAGTGAGGTGGCGGTGCTGAGTGTGACAGAGCAGACAGTGCCCTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156492.2 |
||
| CDS-3UTR TCA 90 bp | GAGGACATGGGAGCAGGGGCCTGGGGTAGAGCTGATATAAGAAGCACCGACCGTGCAGTTGAGACAACCTaGGAGGGCTGTGGGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EDMGAGAWGRADIRSTDRAVETT*EGCGPH Trigger: GTGAGGCCCACAGCCCTCTCAGGTTGTCTCAACTGC...ACGGTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGCCTTTTCACCCCATTTCACAGAGGGAACCAACCAGGCCGGGTGCAAGTCTGCCATCCGCCGCATaGCGCTGTCCGTCCACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKPFHPISQREPTRPGASLPSAA*RCPSTW Trigger: CCACGTGGACGGACAGCGGCATGCGGCGGATGGCAG...ACTTGCACCCGGCCTGGTTGGTTCCCTCTGTGAAATGGGGTGAAAAGGCTTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR GCA 90 bp | GTATTAATAAATAGGACCTGGCAGTCCCGGAGGCAGCGGGTCAGGTCCAGGCTAGGTGTCCTCCCCTCTTaGCTCGAAGGAGGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLINRTWQSRRQRVRSRLGVLPS*LEGGWG Trigger: CCCCCAGCCTCCTTCGAGGCAAGAGGGGAGGACACC...TAGCCTGGACCTGACCCGCTGCCTCCGGGACTGCCAGGTCCTATTTATTAATAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | AGCACCGACCGTTCAGTTAGATTAAGCAGCCTGGACTCAGGTGGGAACTCAGCAGGCCCAGTGGGTCCTTaGGGCCAGTGGCTGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: STDRSVRLSSLDSGGNSAGPVGP*GQWLPI Trigger: GATGGGCAGCCACTGGCCCCAAGGACCCACTGGGCC...TGCTGAGTTCCCACCTGAGTCCAGGCTGCTTAATCTAACTGAACGGTCGGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGACTCAGGTGGGAACTCAGCACCAGAAAACAAGGGGCACACAGGACTCCCGGGTCCAGAAGGGCCTaGGATTCCCATGTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLRWELSTRKQGAHRTPGSRRA*DSHVSR Trigger: CCTGGACACATGGGAATCCCAGGCCCTTCTGGACCC...GGGAGTCCTGTGTGCCCCTTGTTTTCTGGTGCTGAGTTCCCACCTGAGTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | AGACTTCCGCCCCAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTAGATCGGGTAGTTGGTTaGGTGTCCTCCCCTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLPPQSLHICRARRSQVLDRVVG*VSSPLA Trigger: GGCAAGAGGGGAGGACACCCAACCAACTACCCGATC...TAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTGGGGCGGAAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR TCA 90 bp | TGGAGTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGCTCACAGGTCACCCCTaGATGTCCAGGGCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: WSRRPLYTSHSHRGHGSRLTGHP*MSRAAP Trigger: AGGTGCTGCCCTGGACATTCAGGGGTGACCTGTGAG...CCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTACTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGGACATGGGAGCAGGGGCCTGGGGTAGAGCTGATATAAGAAGCACCGACCTCACAGGTCACCCCTaGATGTCCAGGGCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TEDMGAGAWGRADIRSTDLTGHP*MSRAAP Trigger: AGGTGCTGCCCTGGACATTCAGGGGTGACCTGTGAG...GTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR TCA 90 bp | GGAGCAGGGGCCTGGGGTAGAGCTGATATAAGAAGCACCGACCGTTCAGTTAGATGGCTTCCAGCAGTGTaGCCCGTCTGGCCAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGAWGRADIRSTDRSVRWLPAV*PVWPGA Trigger: AGCTCCTGGCCAGACGGGTCACACTGCTGGAAGCCA...TCTAACTGAACGGTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132328.8 ENSMUST00000151906.8 |
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| CDS-3UTR GCA 90 bp | GAGGACATGGGAGCAGGGGCCTGGGGTAGAGCTGATATAAGAAGCACCGACCGTCCATCTTTCCAGGGGTaGCTGCAGCTCCTGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EDMGAGAWGRADIRSTDRPSFQG*LQLLFG Trigger: GCCAAACAGGAGCTGCAGGCACCCCTGGAAAGATGG...ACGGTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | TCAAAGCCTTTTCACCCCATTTCACAGAGGGAACCAACCAGGCCGGGTGCAAGTTCAGCACCGCCACCTTaGCCTCCAGCGCCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKPFHPISQREPTRPGASSAPPP*PPAPSA Trigger: GGCTGAAGGCGCTGGAGGCCAAGGTGGCGGTGCTGA...ACTTGCACCCGGCCTGGTTGGTTCCCTCTGTGAAATGGGGTGAAAAGGCTTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | TCAAAGCCTTTTCACCCCATTTCACAGAGGGAACCAACCAGGCCGGGTGCAAGTTCCTGGGGGTCCCTGTaGGCCTGGCGGGCCTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKPFHPISQREPTRPGASSWGSL*AWRASN Trigger: ATTAGAGGCCCGCCAGGCCCACAGGGACCCCCAGGA...ACTTGCACCCGGCCTGGTTGGTTCCCTCTGTGAAATGGGGTGAAAAGGCTTTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | CATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGTAGGCGTCCCTTGTACAGGCCCAGTGGGTCCTTaGGGCCAGTGGCTGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: HIDSWHLQQTLGVGVPCTGPVGP*GQWLPI Trigger: GATGGGCAGCCACTGGCCCCAAGGACCCACTGGGCC...TGTACAAGGGACGCCTACTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | TGGAGTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGGGGTCCAGAAGGGCCTaGGATTCCCATGTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WSRRPLYTSHSHRGHGSRGSRRA*DSHVSR Trigger: CCTGGACACATGGGAATCCCAGGCCCTTCTGGACCC...CCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTACTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | CAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTAACTTTAGGCAGCGGCCAGAGGTTCCTTTaGGTCCAGAAGGGCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSLHICRARRSQVLTLGSGQRFL*VQKGLG Trigger: TCCCAGGCCCTTCTGGACCCAAAGGAACCTCTGGCC...GCTGCCTAAAGTTAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | CAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTAACTTTAGGCAGCTGCCTCGAAGGAGGCTaGGGGTACCTGTGCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSLHICRARRSQVLTLGSCLEGG*GYLCHQ Trigger: CTGATGGCACAGGTACCCCCAGCCTCCTTCGAGGCA...GCTGCCTAAAGTTAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | CTTTTCACCCCATTTCACAGAGGGAACCAACCAGGCCGGGTGCAAGTGAGGCCTTGCCTCGAAGGAGGCTaGGGGTACCTGTGCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFTPFHRGNQPGRVQVRPCLEGG*GYLCHQ Trigger: CTGATGGCACAGGTACCCCCAGCCTCCTTCGAGGCA...AGGCCTCACTTGCACCCGGCCTGGTTGGTTCCCTCTGTGAAATGGGGTGAAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGACTCAGGTGGGAACTCAGCACCAGAAAACAAGGGGCACACAGGACTCCCGATCGGGTAGTTGGTTaGGTGTCCTCCCCTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGLRWELSTRKQGAHRTPDRVVG*VSSPLA Trigger: GGCAAGAGGGGAGGACACCCAACCAACTACCCGATC...GGGAGTCCTGTGTGCCCCTTGTTTTCTGGTGCTGAGTTCCCACCTGAGTCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTTAGATTAAGCAGCCTGGACTCAGGTGGGAACTCAGCACCAGAAAACAAGTTCCATCTCCAGGGCTaGCCCGGGCAGCCGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVRLSSLDSGGNSAPENKFHLQG*PGQPGS Trigger: GCTCCCCGGCTGCCCGGGGCAGCCCTGGAGATGGAA...CTTGTTTTCTGGTGCTGAGTTCCCACCTGAGTCCAGGCTGCTTAATCTAACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | CATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGTAGGCGTCCCTTGTACATCAGCACCGCCACCTTaGCCTCCAGCGCCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HIDSWHLQQTLGVGVPCTSAPPP*PPAPSA Trigger: GGCTGAAGGCGCTGGAGGCCAAGGTGGCGGTGCTGA...TGTACAAGGGACGCCTACTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | CATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGTAGGCGTCCCTTGTACACCTGCAGCTCCTGTTTaGCCAGGGCGTCCTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HIDSWHLQQTLGVGVPCTPAAPV*PGRPGG Trigger: ACCCCCAGGACGCCCTGGCCAAACAGGAGCTGCAGG...TGTACAAGGGACGCCTACTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTTAGATTAAGCAGCCTGGACTCAGGTGGGAACTCAGCACCAGAAAACAAGAGGACCCATGGGCCCTaGGGGGCCTGGAGGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVRLSSLDSGGNSAPENKRTHGP*GAWRTW Trigger: CCAGGTCCTCCAGGCCCCCCAGGGCCCATGGGTCCT...CTTGTTTTCTGGTGCTGAGTTCCCACCTGAGTCCAGGCTGCTTAATCTAACTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | GTATTAATAAATAGGACCTGGCAGTCCCGGAGGCAGCGGGTCAGGTCCAGGCTAGGCCAGAGGTTCCTTTaGGTCCAGAAGGGCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLINRTWQSRRQRVRSRLGQRFL*VQKGLG Trigger: TCCCAGGCCCTTCTGGACCCAAAGGAACCTCTGGCC...TAGCCTGGACCTGACCCGCTGCCTCCGGGACTGCCAGGTCCTATTTATTAATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
||
| 3UTR CAA 72 bp | TTTACAGGAGGGGAACTGAGACTTCCGCCCCAATCCTaGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FTGGELRLPPQS*HICRARRSQVL Trigger: TAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTGGGGCGGAAGTCTCAGTTCCCCTCCTGTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGGCACTGTCTGCTCTGTCACACTCAGCACCGCCACCTCACTGAGACTGACACTTTGCTGCAGTTaGGACAACCTGAGAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEGTVCSVTLSTATSLRLTLCCS*DNLRGL Trigger: CAGCCCTCTCAGGTTGTCTCAACTGCAGCAAAGTGT...CAGTCTCAGTGAGGTGGCGGTGCTGAGTGTGACAGAGCAGACAGTGCCCTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156492.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAGCCTTTTCACCCCATTTCACAGAGGGAACCAACCAGGCCGGGTGCAAGTCTTTCCAGGGGTGCCTaGAGCTCCTGTTTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKPFHPISQREPTRPGASLSRGA*SSCLAR Trigger: CCTGGCCAAACAGGAGCTGCAGGCACCCCTGGAAAG...ACTTGCACCCGGCCTGGTTGGTTCCCTCTGTGAAATGGGGTGAAAAGGCTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCACCATCTTTCCAGGGGTaGCTGCAGCTCCTGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGVGVPCTHPIPTEDMGAPSFQG*LQLLFG Trigger: GCCAAACAGGAGCTGCAGGCACCCCTGGAAAGATGG...TGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTACTCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | AGCACCGACCGTTCAGTTAGATTAAGCAGCCTGGACTCAGGTGGGAACTCAGCAGGTCCTTGGGGCCAGTaGCTGCCCATCTCAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: STDRSVRLSSLDSGGNSAGPWGQ*LPISVK Trigger: CTTCACTGAGATGGGCAGCCACTGGCCCCAAGGACC...TGCTGAGTTCCCACCTGAGTCCAGGCTGCTTAATCTAACTGAACGGTCGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | TCAAAGCCTTTTCACCCCATTTCACAGAGGGAACCAACCAGGCCGGGTGCAAGTGGGTCCAGAAGGGCCTaGGATTCCCATGTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKPFHPISQREPTRPGASGSRRA*DSHVSR Trigger: CCTGGACACATGGGAATCCCAGGCCCTTCTGGACCC...ACTTGCACCCGGCCTGGTTGGTTCCCTCTGTGAAATGGGGTGAAAAGGCTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
||
| 3UTR CAA 72 bp | GTGGCATCTGCAGCAGACACTTGGAGTAGGCGTCCCTaGTACACATCCCATTCCCACAGAGGACATGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VASAADTWSRRP*YTSHSHRGHGS Trigger: GCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTACTCCAAGTGTCTGCTGCAGATGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTCACCCCATTTCACAGAGGGAACCAACCAGGCCGGGTGCAAGTGAGGCCTACACTTTGCTGCAGTTaGGACAACCTGAGAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFTPFHRGNQPGRVQVRPTLCCS*DNLRGL Trigger: CAGCCCTCTCAGGTTGTCTCAACTGCAGCAAAGTGT...AGGCCTCACTTGCACCCGGCCTGGTTGGTTCCCTCTGTGAAATGGGGTGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR GCA 90 bp | ATGTTTATTGTCCTGTACATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGTTCCATCTCCAGGGCTaGCCCGGGCAGCCGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MFIVLYILTRGICSRHLEFHLQG*PGQPGS Trigger: GCTCCCCGGCTGCCCGGGGCAGCCCTGGAGATGGAA...CTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGGGAATCAAGTCTATCCTaGAGGCTTCCATCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGVPCTHPIPTEDMGAGESSLS*RLPSPG Trigger: CCCTGGAGATGGAAGCCTGCAGGATAGACTTGATTC...CCCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR GCA 90 bp | GAGGACATGGGAGCAGGGGCCTGGGGTAGAGCTGATATAAGAAGCACCGACCGTGAATCAAGTCTATCCTaGAGGCTTCCATCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EDMGAGAWGRADIRSTDRESSLS*RLPSPG Trigger: CCCTGGAGATGGAAGCCTGCAGGATAGACTTGATTC...ACGGTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR GCA 90 bp | AGCACCGACCGTTCAGTTAGATTAAGCAGCCTGGACTCAGGTGGGAACTCAGCACCATCTTTCCAGGGGTaGCTGCAGCTCCTGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: STDRSVRLSSLDSGGNSAPSFQG*LQLLFG Trigger: GCCAAACAGGAGCTGCAGGCACCCCTGGAAAGATGG...TGCTGAGTTCCCACCTGAGTCCAGGCTGCTTAATCTAACTGAACGGTCGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTTATTGTCCTGTACATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGTTGGCCAGGGCGTCCTaGGGGTCCCTGTGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MFIVLYILTRGICSRHLELARAS*GSLWAW Trigger: CCAGGCCCACAGGGACCCCCAGGACGCCCTGGCCAA...CTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | GGTCAAGCAGGGATGTTTATTGTCCTGTACATATTGACTCGTGGCATCTGCAGCGGGTCCAGGTGGACCTaGAGGCCCTGGAGGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQAGMFIVLYILTRGICSGSRWT*RPWRSH Trigger: ATGGGACCTCCAGGGCCTCCAGGTCCACCTGGACCC...GCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAACATCCCTGCTTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTTATTGTCCTGTACATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGAGGACCCATGGGCCCTaGGGGGCCTGGAGGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MFIVLYILTRGICSRHLERTHGP*GAWRTW Trigger: CCAGGTCCTCCAGGCCCCCCAGGGCCCATGGGTCCT...CTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | TCAAAGCCTTTTCACCCCATTTCACAGAGGGAACCAACCAGGCCGGGTGCAAGTGATCGGGTAGTTGGTTaGGTGTCCTCCCCTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKPFHPISQREPTRPGASDRVVG*VSSPLA Trigger: GGCAAGAGGGGAGGACACCCAACCAACTACCCGATC...ACTTGCACCCGGCCTGGTTGGTTCCCTCTGTGAAATGGGGTGAAAAGGCTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGAGTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAACACTTTGCTGCAGTTaGGACAACCTGAGAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGVGVPCTHPIPTEDMGATLCCS*DNLRGL Trigger: CAGCCCTCTCAGGTTGTCTCAACTGCAGCAAAGTGT...TGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTACTCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGTAGAGCTGATATAAGAAGCACCGACCGTTCAGTTAGATTAAGCAGCCTGCAGAGTCCTCAGGGGTaGCTGGGACTGAGGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: WGRADIRSTDRSVRLSSLQSPQG*LGLRAL Trigger: CAGTGCCCTCAGTCCCAGCCACCCCTGAGGACTCTG...CAGGCTGCTTAATCTAACTGAACGGTCGGTGCTTCTTATATCAGCTCTACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGTAGAGCTGATATAAGAAGCACCGACCGTTCAGTTAGATTAAGCAGCCTGCTTTCCAGGGGTGCCTaGAGCTCCTGTTTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WGRADIRSTDRSVRLSSLLSRGA*SSCLAR Trigger: CCTGGCCAAACAGGAGCTGCAGGCACCCCTGGAAAG...CAGGCTGCTTAATCTAACTGAACGGTCGGTGCTTCTTATATCAGCTCTACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTTAGATTAAGCAGCCTGGACTCAGGTGGGAACTCAGCACCAGAAAACAAGGCCTCTAATCCTCACTaGGCTCTGGCTGTCGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVRLSSLDSGGNSAPENKASNPH*ALAVGA Trigger: GGCACCGACAGCCAGAGCCCAGTGAGGATTAGAGGC...CTTGTTTTCTGGTGCTGAGTTCCCACCTGAGTCCAGGCTGCTTAATCTAACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTTATTGTCCTGTACATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGCCTGCAGCTCCTGTTTaGCCAGGGCGTCCTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MFIVLYILTRGICSRHLEPAAPV*PGRPGG Trigger: ACCCCCAGGACGCCCTGGCCAAACAGGAGCTGCAGG...CTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTTATTGTCCTGTACATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGGGGTCCAGGTGGACCTaGAGGCCCTGGAGGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MFIVLYILTRGICSRHLEGSRWT*RPWRSH Trigger: ATGGGACCTCCAGGGCCTCCAGGTCCACCTGGACCC...CTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | GTTTATTGTCCTGTACATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGTAGGGTCCAGGTGGACCTaGAGGCCCTGGAGGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VYCPVHIDSWHLQQTLGVGSRWT*RPWRSH Trigger: ATGGGACCTCCAGGGCCTCCAGGTCCACCTGGACCC...TACTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CCA 90 bp | GTTTATTGTCCTGTACATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGTAGACCTGGCCATAGGGTaGCCCTACAGGGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYCPVHIDSWHLQQTLGVDLAIG*PYRGWR Trigger: CCTCCAGCCCCTGTAGGGCCACCCTATGGCCAGGTC...TACTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | TCAGTTAGATTAAGCAGCCTGGACTCAGGTGGGAACTCAGCACCAGAAAACAAGTGCCTCGAAGGAGGCTaGGGGTACCTGTGCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVRLSSLDSGGNSAPENKCLEGG*GYLCHQ Trigger: CTGATGGCACAGGTACCCCCAGCCTCCTTCGAGGCA...CTTGTTTTCTGGTGCTGAGTTCCCACCTGAGTCCAGGCTGCTTAATCTAACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | AGCACCGACCGTTCAGTTAGATTAAGCAGCCTGGACTCAGGTGGGAACTCAGCATCCCAAGTCTGGTTCTaGCCAGATGATGGCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: STDRSVRLSSLDSGGNSASQVWF*PDDGFQ Trigger: CTGGAAGCCATCATCTGGCCAGAACCAGACTTGGGA...TGCTGAGTTCCCACCTGAGTCCAGGCTGCTTAATCTAACTGAACGGTCGGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132328.8 |
||
| CDS-3UTR CCA 90 bp | GTTTATTGTCCTGTACATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGTAGGGTCCAGAAGGGCCTaGGATTCCCATGTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYCPVHIDSWHLQQTLGVGSRRA*DSHVSR Trigger: CCTGGACACATGGGAATCCCAGGCCCTTCTGGACCC...TACTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| CDS-3UTR CCA 90 bp | ATGTTTATTGTCCTGTACATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGGGCCAGAGGTTCCTTTaGGTCCAGAAGGGCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MFIVLYILTRGICSRHLEGQRFL*VQKGLG Trigger: TCCCAGGCCCTTCTGGACCCAAAGGAACCTCTGGCC...CTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR CAA 72 bp | AACCAACCAGGCCGGGTGCAAGTGAGGCCTGACTTTTaGAGGCCCAGTCCCTGTTTAGTCTGTCATGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: NQPGRVQVRPDF*RPSPCLVCHVI Trigger: TATAACATGACAGACTAAACAGGGACTGGGCCTCAAAAAGTCAGGCCTCACTTGCACCCGGCCTGGTTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| 3UTR CAA 72 bp | CTTCCTTCTGTGGTCAATAGGACAAAGCCAAAACCTTaGACAGGAGGGACCGTGGAAGTGGAGAAGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSVVNRTKPKP*TGGTVEVEKQS Trigger: AGACTGCTTCTCCACTTCCACGGTCCCTCCTGTCAAAGGTTTTGGCTTTGTCCTATTGACCACAGAAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153308.2 |
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| CDS GCA 90 bp | AGCAGGGCAGAGTCCTCAGGGGTGGCTGGGACTGAGGGCACTGTCTaGTCTGTCACACTCAGCACCGCCACCTTGGCCTCCAGCGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRAESSGVAGTEGTV*SVTLSTATLASSAF Trigger: GAAGGCGCTGGAGGCCAAGGTGGCGGTGCTGAGTGTGACAGAGCAGACAGTGCCCTCAGTCCCAGCCACCCCTGAGGACTCTGCCCTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CAA 90 bp | GTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGGGCCCTGTCGGTGCCTCCCTaGGGGCCTGTGGGCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VGVPCTHPIPTEDMGAGALSVPP*GPVGPG Trigger: TCCTGGGCCCACAGGCCCCAAGGGAGGCACCGACAG...GGCCCCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CAA 90 bp | AGACTTCCGCCCCAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTACTGTCGGTGCCTCCCTaGGGGCCTGTGGGCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLPPQSLHICRARRSQVLLSVPP*GPVGPG Trigger: TCCTGGGCCCACAGGCCCCAAGGGAGGCACCGACAG...TAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTGGGGCGGAAGTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS TCA 90 bp | CGTGGGCTCCAGGAGGCCAGGGGAGCCTTCCTCACAGGTCACCCCTaGATGTCCAGGGCAGCACCTCCATTCTCGGGCCGTCACTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RGLQEARGAFLTGHP*MSRAAPPFSGRHCL Trigger: AAGACAGTGACGGCCCGAGAATGGAGGTGCTGCCCTGGACATTCAGGGGTGACCTGTGAGGAAGGCTCCCCTGGCCTCCTGGAGCCCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000156492.2 ENSMUST00000163299.8 |
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| CDS CCA 90 bp | GCTGGGGGTACCTGTGCCATCAGGGCCTGCCCCGGATCCCAAGTCTaGTTCTGGCCAGATGATGGCTTCCAGCAGTGTGACCCGTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGGTCAIRACPGSQV*FWPDDGFQQCDPSG Trigger: GCCAGACGGGTCACACTGCTGGAAGCCATCATCTGGCCAGAACCAGACTTGGGATCCGGGGCAGGCCCTGATGGCACAGGTACCCCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132328.8 |
||
| CDS CCA 90 bp | GGTACCTGTGCCATCAGGGCCTGCCCCGGATCCCAAGTCTGGTTCTaGCCAGATGATGGCTTCCAGCAGTGTGACCCGTCTGGCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GTCAIRACPGSQVWF*PDDGFQQCDPSGQE Trigger: CTCCTGGCCAGACGGGTCACACTGCTGGAAGCCATCATCTGGCCAGAACCAGACTTGGGATCCGGGGCAGGCCCTGATGGCACAGGTACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132328.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGACTCAGGTGGGAACTCAGCACCAGAAAACAAGGGGCACACAGGACTCCCCTCAGCACCGCCACCTaGGCCTCCAGCGCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGLRWELSTRKQGAHRTPLSTAT*ASSAFS Trigger: GCTGAAGGCGCTGGAGGCCAAGGTGGCGGTGCTGAG...GGGAGTCCTGTGTGCCCCTTGTTTTCTGGTGCTGAGTTCCCACCTGAGTCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS-3UTR CAA 90 bp | GTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGGGCCTGGCCAGAGGTTCCTTaGGGTCCAGAAGGGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGVPCTHPIPTEDMGAGAWPEVP*GPEGPG Trigger: CCCAGGCCCTTCTGGACCCAAAGGAACCTCTGGCCA...GGCCCCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CAA 90 bp | AGACTTCCGCCCCAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTATGGCCAGAGGTTCCTTaGGGTCCAGAAGGGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLPPQSLHICRARRSQVLWPEVP*GPEGPG Trigger: CCCAGGCCCTTCTGGACCCAAAGGAACCTCTGGCCA...TAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTGGGGCGGAAGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CAA 90 bp | CAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTAACTTTAGGCAGCGGGTGTCCTCCCCTCTaGCCTCGAAGGAGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QSLHICRARRSQVLTLGSGCPPL*PRRRLG Trigger: CCCCAGCCTCCTTCGAGGCAAGAGGGGAGGACACCC...GCTGCCTAAAGTTAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS CCA 90 bp | GGACTGAGGGCACTGTCTGCTCTGTCACACTCAGCACCGCCACCTTaGCCTCCAGCGCCTTCAGCCTCTCTGTCAGCTCAGACACTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLRALSALSHSAPPP*PPAPSASLSAQTLC Trigger: GCAAAGTGTCTGAGCTGACAGAGAGGCTGAAGGCGCTGGAGGCCAAGGTGGCGGTGCTGAGTGTGACAGAGCAGACAGTGCCCTCAGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
||
| CDS CCA 90 bp | ACAAGGGTCTCACCACGGTTCTGTAGCTGTTCCCAGGGCAGCCCATaGGCCACGGGCAGTTCTGTAGCACTCGCTGGAGGTAGGTACCAT | + |
|
Preference number: 5 (lower is better) Translates to: TRVSPRFCSCSQGSP*ATGSSVALAGGRYH Trigger: ATGGTACCTACCTCCAGCGAGTGCTACAGAACTGCCCGTGGCCCATGGGCTGCCCTGGGAACAGCTACAGAACCGTGGTGAGACCCTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000156492.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAGGACATGGGAGCAGGGGCCTGGGGTAGAGCTGATATAAGAAGCACCGACTGGCCAGAGGTTCCTTaGGGTCCAGAAGGGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TEDMGAGAWGRADIRSTDWPEVP*GPEGPG Trigger: CCCAGGCCCTTCTGGACCCAAAGGAACCTCTGGCCA...GTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGTGGCCAGAGGTTCCTTaGGGTCCAGAAGGGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WSRRPLYTSHSHRGHGSRWPEVP*GPEGPG Trigger: CCCAGGCCCTTCTGGACCCAAAGGAACCTCTGGCCA...CCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTACTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
||
| CDS CCA 90 bp | TTGGGGCCAGTGGCTGCCCATCTCAGTGAAGGTATTAGACAGCAGTaGATCCCCATGCAGAGAGACCTGGCCATAGGGTGGCCCTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGPVAAHLSEGIRQQ*IPMQRDLAIGWPYR Trigger: CCTGTAGGGCCACCCTATGGCCAGGTCTCTCTGCATGGGGATCCACTGCTGTCTAATACCTTCACTGAGATGGGCAGCCACTGGCCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
||
| CDS CCA 90 bp | CTTTGTACAAGGGTCTCACCACGGTTCTGTTCCCAGGGCAGCCCATaGGCCACGGGCAGTTCTGTAGCACTCGCTGGAGGTAGGTACCAT | + |
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Preference number: 5 (lower is better) Translates to: LCTRVSPRFCSQGSP*ATGSSVALAGGRYH Trigger: ATGGTACCTACCTCCAGCGAGTGCTACAGAACTGCCCGTGGCCCATGGGCTGCCCTGGGAACAGAACCGTGGTGAGACCCTTGTACAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163299.8 |
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| CDS-3UTR CAA 90 bp | GTCTGCTCTGTCACACTCAGCACCGCCACCTCACTGAGACTGGGTCTCATGGGAGACACTTTGCTGCAGTaGAGACAACCTGAGAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: VCSVTLSTATSLRLGLMGDTLLQ*RQPERA Trigger: AGCCCTCTCAGGTTGTCTCAACTGCAGCAAAGTGTC...TCCCATGAGACCCAGTCTCAGTGAGGTGGCGGTGCTGAGTGTGACAGAGCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156492.2 |
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| CDS-3UTR CAA 90 bp | GTCACACTCAGCACCGCCACCTCACTGAGACTGGGTCTCATGGGAGGGGGCTTTGTCAGCTCAGACACTTaGCTGCAGTTGAGACAACCT | + |
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Preference number: 5 (lower is better) Translates to: VTLSTATSLRLGLMGGGFVSSDT*LQLRQP Trigger: AGGTTGTCTCAACTGCAGCAAAGTGTCTGAGCTGAC...AAAGCCCCCTCCCATGAGACCCAGTCTCAGTGAGGTGGCGGTGCTGAGTGTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156492.2 |
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| CDS-3UTR CAA 90 bp | GGTCAAGCAGGGATGTTTATTGTCCTGTACATATTGACTCGTGGCATCTGCAGCGGGTGTCCTCCCCTCTaGCCTCGAAGGAGGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: GQAGMFIVLYILTRGICSGCPPL*PRRRLG Trigger: CCCCAGCCTCCTTCGAGGCAAGAGGGGAGGACACCC...GCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAACATCCCTGCTTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS-3UTR CAA 90 bp | ACTGAGGGCACTGTCTGCTCTGTCACACTCAGCACCGCCACCTCACTGAGACTGGTCTTGTACGTCACTTaGTACAAGGGTCTCACCACG | + |
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Preference number: 5 (lower is better) Translates to: TEGTVCSVTLSTATSLRLVLYVT*YKGLTT Trigger: CGTGGTGAGACCCTTGTACAAAGTGACGTACAAGAC...CAGTCTCAGTGAGGTGGCGGTGCTGAGTGTGACAGAGCAGACAGTGCCCTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156492.2 |
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| CDS-3UTR CAA 90 bp | CAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTAACTTTAGGCAGCGTCTTGTACGTCACTTaGTACAAGGGTCTCACCACG | + |
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Preference number: 5 (lower is better) Translates to: QSLHICRARRSQVLTLGSVLYVT*YKGLTT Trigger: CGTGGTGAGACCCTTGTACAAAGTGACGTACAAGAC...GCTGCCTAAAGTTAGGACCTGGGACCGCCTGGCCCTGCAGATATGCAAGGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CAA 90 bp | GTTTATTGTCCTGTACATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGTACTCAGCACCGCCACCTaGGCCTCCAGCGCCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: VYCPVHIDSWHLQQTLGVLSTAT*ASSAFS Trigger: GCTGAAGGCGCTGGAGGCCAAGGTGGCGGTGCTGAG...TACTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CAA 90 bp | CTTGGAGTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGTCAGCTCAGACACTTaGCTGCAGTTGAGACAACCT | + |
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Preference number: 5 (lower is better) Translates to: LGVGVPCTHPIPTEDMGAVSSDT*LQLRQP Trigger: AGGTTGTCTCAACTGCAGCAAAGTGTCTGAGCTGAC...TGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTACTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CAA 90 bp | ACAGAGGACATGGGAGCAGGGGCCTGGGGTAGAGCTGATATAAGAAGCACCGACACCCAAGAAGTTCTTTaGTCCAGGAAGCCTGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: TEDMGAGAWGRADIRSTDTQEVL*SRKPVS Trigger: ACTCACAGGCTTCCTGGACAAAAGAACTTCTTGGGT...GTCGGTGCTTCTTATATCAGCTCTACCCCAGGCCCCTGCTCCCATGTCCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151906.8 |
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| CDS-3UTR CAA 90 bp | GTAGGCGTCCCTTGTACACATCCCATTCCCACAGAGGACATGGGAGCAGGGGCCCATAGAGCCCAATCATaGTTTCCAAGATTAAAACCC | + |
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Preference number: 5 (lower is better) Translates to: VGVPCTHPIPTEDMGAGAHRAQS*FPRLKP Trigger: GGGTTTTAATCTTGGAAACAATGATTGGGCTCTATG...GGCCCCTGCTCCCATGTCCTCTGTGGGAATGGGATGTGTACAAGGGACGCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CAA 90 bp | TGGGGTAGAGCTGATATAAGAAGCACCGACCGTTCAGTTAGATTAAGCAGCCTGGACACTTTGCTGCAGTaGAGACAACCTGAGAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: WGRADIRSTDRSVRLSSLDTLLQ*RQPERA Trigger: AGCCCTCTCAGGTTGTCTCAACTGCAGCAAAGTGTC...CAGGCTGCTTAATCTAACTGAACGGTCGGTGCTTCTTATATCAGCTCTACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CAA 90 bp | CTTTTCACCCCATTTCACAGAGGGAACCAACCAGGCCGGGTGCAAGTGAGGCCTCATAGAGCCCAATCATaGTTTCCAAGATTAAAACCC | + |
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Preference number: 5 (lower is better) Translates to: LFTPFHRGNQPGRVQVRPHRAQS*FPRLKP Trigger: GGGTTTTAATCTTGGAAACAATGATTGGGCTCTATG...AGGCCTCACTTGCACCCGGCCTGGTTGGTTCCCTCTGTGAAATGGGGTGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS TCA 90 bp | CTAATATCCTTCAAACCCAAGAAGTTCTTTTGTCCAGGAAGCCTGTaGGTATCCTGGCCAGATGATGGCTTCCAGCAGTGTGACCCGTCT | + |
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Preference number: 5 (lower is better) Translates to: LISFKPKKFFCPGSL*VSWPDDGFQQCDPS Trigger: AGACGGGTCACACTGCTGGAAGCCATCATCTGGCCAGGATACTCACAGGCTTCCTGGACAAAAGAACTTCTTGGGTTTGAAGGATATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151906.8 |
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| CDS-3UTR CAA 90 bp | GTTTATTGTCCTGTACATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGTAGTCTTGTACGTCACTTaGTACAAGGGTCTCACCACG | + |
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Preference number: 5 (lower is better) Translates to: VYCPVHIDSWHLQQTLGVVLYVT*YKGLTT Trigger: CGTGGTGAGACCCTTGTACAAAGTGACGTACAAGAC...TACTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS-3UTR CAA 90 bp | GTTTATTGTCCTGTACATATTGACTCGTGGCATCTGCAGCAGACACTTGGAGTAGTCAGCTCAGACACTTaGCTGCAGTTGAGACAACCT | + |
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Preference number: 5 (lower is better) Translates to: VYCPVHIDSWHLQQTLGVVSSDT*LQLRQP Trigger: AGGTTGTCTCAACTGCAGCAAAGTGTCTGAGCTGAC...TACTCCAAGTGTCTGCTGCAGATGCCACGAGTCAATATGTACAGGACAATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062821.13 ENSMUST00000163299.8 |
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| CDS GCA 72 bp | CTGAGAGGGCTGTGGGCCTCACTGCCATCCGCCGCATaGCGCTGTCCGTCCACGTGGGCTCCAGGAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LRGLWASLPSAA*RCPSTWAPGGQ Trigger: CTGGCCTCCTGGAGCCCACGTGGACGGACAGCGGCATGCGGCGGATGGCAGTGAGGCCCACAGCCCTCTCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000156492.2 ENSMUST00000163299.8 |
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| CDS CCA 72 bp | TGGGTGGCCAGAGGTTCCTTTGGGTCCAGAAGGGCCTaGGATTCCCATGTGTCCAGGACTCCCAGGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: WVARGSFGSRRA*DSHVSRTPRGT Trigger: GGTGCCCCTGGGAGTCCTGGACACATGGGAATCCCAGGCCCTTCTGGACCCAAAGGAACCTCTGGCCACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000151906.8 ENSMUST00000163299.8 |
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| CDS CCA 72 bp | GGAGGACCTGGGGGCCCAGTGGGTCCTTGGGGCCAGTaGCTGCCCATCTCAGTGAAGGTATTAGACAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: GGPGGPVGPWGQ*LPISVKVLDSS Trigger: ACTGCTGTCTAATACCTTCACTGAGATGGGCAGCCACTGGCCCCAAGGACCCACTGGGCCCCCAGGTCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS CCA 72 bp | GCCATCAGGGCCTGCCCCGGATCCCAAGTCTGGTTCTaGCCAGATGATGGCTTCCAGCAGTGTGACCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: AIRACPGSQVWF*PDDGFQQCDPS Trigger: AGACGGGTCACACTGCTGGAAGCCATCATCTGGCCAGAACCAGACTTGGGATCCGGGGCAGGCCCTGATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132328.8 |
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| CDS CCA 72 bp | ACCTGTGCCATCAGGGCCTGCCCCGGATCCCAAGTCTaGTTCTGGCCAGATGATGGCTTCCAGCAGTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: TCAIRACPGSQV*FWPDDGFQQCD Trigger: GTCACACTGCTGGAAGCCATCATCTGGCCAGAACCAGACTTGGGATCCGGGGCAGGCCCTGATGGCACAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132328.8 |
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| CDS CCA 72 bp | GTGGCTGCCCATCTCAGTGAAGGTATTAGACAGCAGTaGATCCCCATGCAGAGAGACCTGGCCATAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: VAAHLSEGIRQQ*IPMQRDLAIGW Trigger: CCACCCTATGGCCAGGTCTCTCTGCATGGGGATCCACTGCTGTCTAATACCTTCACTGAGATGGGCAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062821.13 ENSMUST00000132328.8 ENSMUST00000163299.8 |
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| CDS CAA 72 bp | CTCCATTCTCGGGCCGTCACTGTCTTGTACGTCACTTaGTACAAGGGTCTCACCACGGTTCTGTTCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LHSRAVTVLYVT*YKGLTTVLFPG Trigger: CCCTGGGAACAGAACCGTGGTGAGACCCTTGTACAAAGTGACGTACAAGACAGTGACGGCCCGAGAATGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163299.8 |
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| CDS TCA 72 bp | TTCAAACCCAAGAAGTTCTTTTGTCCAGGAAGCCTGTaGGTATCCTGGCCAGATGATGGCTTCCAGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: FKPKKFFCPGSL*VSWPDDGFQQC Trigger: ACACTGCTGGAAGCCATCATCTGGCCAGGATACTCACAGGCTTCCTGGACAAAAGAACTTCTTGGGTTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151906.8 |
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