Pregenerated sensors for EMG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004268Ensembl transcript IDs: ENSMUST00000004379.8, ENSMUST00000203238.2
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CAGTGTTGTCTCCCCACTCTGCAGTCTTGGTACAGAAGATTATCTTCCAGCAGAAGAGTCCTTCCTGTCTaGGAACCAGGCCCTGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: QCCLPTLQSWYRRLSSSRRVLPV*EPGPAG Trigger: CCCAGCAGGGCCTGGTTCTCAGACAGGAAGGACTCT...TCTGCTGGAAGATAATCTTCTGTACCAAGACTGCAGAGTGGGGAGACAACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| 3UTR GCA 72 bp | TATCTTCCAGCAGATCTTAGGAGCCAAAAGACAAACTaGCAAGAGTCCTTCCTGTCTGAGAACCAGGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YLPADLRSQKTN*QESFLSENQAL Trigger: CAGGGCCTGGTTCTCAGACAGGAAGGACTCTTGGCAGTTTGTCTTTTGGCTCCTAAGATCTGCTGGAAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCCCCACTCTGCAGTCTTGGTACAGAAGATTATCTTCCAGCAGATCTTAGGTCCGGCCTCCGCACTTaGTTCCTGCCCCAAGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSPLCSLGTEDYLPADLRSGLRT*FLPQAG Trigger: TCCGGCTTGGGGCAGGAAGCAAGTGCGGAGGCCGGA...CCTAAGATCTGCTGGAAGATAATCTTCTGTACCAAGACTGCAGAGTGGGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTGTCTCCCCACTCTGCAGTCTTGGTACAGAAGATTATCTTCCAGCAGACTTCCAGCACCACAATaGGCCTCCGGCCTCCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QCCLPTLQSWYRRLSSSRLPAPQ*ASGLRT Trigger: AGTGCGGAGGCCGGAGGCTCATTGTGGTGCTGGAAG...TCTGCTGGAAGATAATCTTCTGTACCAAGACTGCAGAGTGGGGAGACAACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAGCAGATCTTAGGAGCCAAAAGACAAACTGCCAAGAGTCCTTCCTGTCTGGTCCTGCTCCTGCACTaGAAATCGCCGCTCACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FQQILGAKRQTAKSPSCLVLLLH*KSPLTR Trigger: CCTCGTGAGCGGCGATTTTCAGTGCAGGAGCAGGAC...CAGACAGGAAGGACTCTTGGCAGTTTGTCTTTTGGCTCCTAAGATCTGCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR CCA 90 bp | TCCCCACTCTGCAGTCTTGGTACAGAAGATTATCTTCCAGCAGATCTTAGGAGCCTGGTGGGTGATGTCTaGTCTGACTTCCCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPLCSLGTEDYLPADLRSLVGDV*SDFPWV Trigger: GACCCAGGGGAAGTCAGACCAGACATCACCCACCAG...GCTCCTAAGATCTGCTGGAAGATAATCTTCTGTACCAAGACTGCAGAGTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCAGCAGATCTTAGGAGCCAAAAGACAAACTGCCAAGAGTCCTTCCTGTCTAGCATCAGCAGGCTCTaGTGGGTGATGTCTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPADLRSQKTNCQESFLSSISRL*WVMSGL Trigger: CAGACCAGACATCACCCACCAGAGCCTGCTGATGCT...AGACAGGAAGGACTCTTGGCAGTTTGTCTTTTGGCTCCTAAGATCTGCTGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR CCA 90 bp | TTAGGAGCCAAAAGACAAACTGCCAAGAGTCCTTCCTGTCTGAGAACCAGGCCCCAGCCAACTGGGAAGTaGTCGGACACTGGATTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LGAKRQTAKSPSCLRTRPQPTGK*SDTGFL Trigger: TAAGAATCCAGTGTCCGACCACTTCCCAGTTGGCTG...GGGCCTGGTTCTCAGACAGGAAGGACTCTTGGCAGTTTGTCTTTTGGCTCCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTTGTCTCCCCACTCTGCAGTCTTGGTACAGAAGATTATCTTCCAGCAGATCTGTGTACTCCACACTaGCCTTGCCATGGGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVVSPLCSLGTEDYLPADLCTPH*PCHGQR Trigger: CCTTTGCCCATGGCAAGGTCAGTGTGGAGTACACAG...ATCTGCTGGAAGATAATCTTCTGTACCAAGACTGCAGAGTGGGGAGACAACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR CCA 90 bp | CAGATCTTAGGAGCCAAAAGACAAACTGCCAAGAGTCCTTCCTGTCTGAGAACCTGGTCTGACTTCCCCTaGGTCCCGTCCATTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QILGAKRQTAKSPSCLRTWSDFP*VPSILQ Trigger: TTGAAGAATGGACGGGACCCAGGGGAAGTCAGACCA...GGTTCTCAGACAGGAAGGACTCTTGGCAGTTTGTCTTTTGGCTCCTAAGATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGAGCCAAAAGACAAACTGCCAAGAGTCCTTCCTGTCTGAGAACCAGGCCCGTAAAAGCTGAACCATaGGGCCACAAAATCGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGAKRQTAKSPSCLRTRPVKAEP*GHKIGQ Trigger: TTGACCGATTTTGTGGCCTCATGGTTCAGCTTTTAC...GGGCCTGGTTCTCAGACAGGAAGGACTCTTGGCAGTTTGTCTTTTGGCTCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTTGTCTCCCCACTCTGCAGTCTTGGTACAGAAGATTATCTTCCAGCAGATAAGCGCAGCAGAGAGTaGATAGTTGCTGATGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SVVSPLCSLGTEDYLPADKRSRE*IVADGH Trigger: GTGTCCATCAGCAACTATCCACTCTCTGCTGCGCTT...ATCTGCTGGAAGATAATCTTCTGTACCAAGACTGCAGAGTGGGGAGACAACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGTTGTCTCCCCACTCTGCAGTCTTGGTACAGAAGATTATCTTCCAGCAGAAGAGTGGATAGTTGCTaGTGGACACCATCTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCCLPTLQSWYRRLSSSRRVDSC*WTPSFL Trigger: CAGAAAAGATGGTGTCCATCAGCAACTATCCACTCT...TCTGCTGGAAGATAATCTTCTGTACCAAGACTGCAGAGTGGGGAGACAACACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCCCCACTCTGCAGTCTTGGTACAGAAGATTATCTTCCAGCAGATCTTAGGAACAACATGGACTTGTaGCTGTCACAGTTGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSPLCSLGTEDYLPADLRNNMDL*LSQLSS Trigger: GCTACTCAACTGTGACAGGCACAAGTCCATGTTGTT...CCTAAGATCTGCTGGAAGATAATCTTCTGTACCAAGACTGCAGAGTGGGGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGATTATCTTCCAGCAGATCTTAGGAGCCAAAAGACAAACTGCCAAGAGTATCAGCAGGCTCTGGTaGGTGATGTCTGGTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: QKIIFQQILGAKRQTAKSISRLW*VMSGLT Trigger: AGTCAGACCAGACATCACCCACCAGAGCCTGCTGAT...ACTCTTGGCAGTTTGTCTTTTGGCTCCTAAGATCTGCTGGAAGATAATCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGATCTTAGGAGCCAAAAGACAAACTGCCAAGAGTCCTTCCTGTCTGAGACATTCTTCAACAACATaGACTTGTGCCTGTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QQILGAKRQTAKSPSCLRHSSTT*TCACHS Trigger: ACTGTGACAGGCACAAGTCCATGTTGTTGAAGAATG...TCTCAGACAGGAAGGACTCTTGGCAGTTTGTCTTTTGGCTCCTAAGATCTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCTCCCCACTCTGCAGTCTTGGTACAGAAGATTATCTTCCAGCAGATCTTACTAGGAATTCGAGTCTaGGGGTTCACTTCAATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPHSAVLVQKIIFQQILLGIRV*GFTSIS Trigger: GCTGATTGAAGTGAACCCCCAGACTCGAATTCCTAG...TAAGATCTGCTGGAAGATAATCTTCTGTACCAAGACTGCAGAGTGGGGAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTGTCTCCCCACTCTGCAGTCTTGGTACAGAAGATTATCTTCCAGCAGATCGAAGTGGTCGGACACTaGATTCTTAATTACCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLSPHSAVLVQKIIFQQIEVVGH*ILNYLQ Trigger: TTGAAGGTAATTAAGAATCCAGTGTCCGACCACTTC...GATCTGCTGGAAGATAATCTTCTGTACCAAGACTGCAGAGTGGGGAGACAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTTGTCTCCCCACTCTGCAGTCTTGGTACAGAAGATTATCTTCCAGCAGATAGTTTGTGTAAAAGCTaGACCATGAGGCCACAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SVVSPLCSLGTEDYLPADSLCKS*TMRPQN Trigger: ATTTTGTGGCCTCATGGTTCAGCTTTTACACAAACT...ATCTGCTGGAAGATAATCTTCTGTACCAAGACTGCAGAGTGGGGAGACAACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGCAGATCTTAGGAGCCAAAAGACAAACTGCCAAGAGTCCTTCCTGTCTGCAACAGAAAAGGAAGTaGCAATTTTCATACAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FQQILGAKRQTAKSPSCLQQKRK*QFSYSQ Trigger: TTGGCTGTATGAAAATTGGCACTTCCTTTTCTGTTG...CAGACAGGAAGGACTCTTGGCAGTTTGTCTTTTGGCTCCTAAGATCTGCTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| 3UTR CAA 72 bp | AACAACTATACAGTGTTGTCTCCCCACTCTGCAGTCTaGGTACAGAAGATTATCTTCCAGCAGATCTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NNYTVLSPHSAV*VQKIIFQQILG Trigger: TCCTAAGATCTGCTGGAAGATAATCTTCTGTACCAAGACTGCAGAGTGGGGAGACAACACTGTATAGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS GCA 90 bp | CCCTTCCAGCACCACAATGAGCCTCCGGCCTCCGCACTTGCTTCCTaGCCCAAGCCGGAGCTTCTTAGGCGGCGTAGTCTCCCAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PFQHHNEPPASALAS*PKPELLRRRSLPVL Trigger: CAGGACTGGGAGACTACGCCGCCTAAGAAGCTCCGGCTTGGGGCAGGAAGCAAGTGCGGAGGCCGGAGGCTCATTGTGGTGCTGGAAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004379.8 ENSMUST00000203238.2 |
||
| CDS TCA 90 bp | CCGGAGCTTCTTAGGCGGCGTAGTCTCCCAGTCCTGCTCCTGCACTaGAAATCGCCGCTCACGAGGTTGGAAGCCACCACTGGCCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PELLRRRSLPVLLLH*KSPLTRLEATTGRR Trigger: TCTGCGGCCAGTGGTGGCTTCCAACCTCGTGAGCGGCGATTTTCAGTGCAGGAGCAGGACTGGGAGACTACGCCGCCTAAGAAGCTCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004379.8 ENSMUST00000203238.2 |
||
| CDS CCA 90 bp | AAGCATCAGCAGGCTCTGGTGGGTGATGTCTGGTCTGACTTCCCCTaGGTCCCGTCCATTCTTCAACAACATGGACTTGTGCCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: KHQQALVGDVWSDFP*VPSILQQHGLVPVT Trigger: TGTGACAGGCACAAGTCCATGTTGTTGAAGAATGGACGGGACCCAGGGGAAGTCAGACCAGACATCACCCACCAGAGCCTGCTGATGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS CCA 90 bp | TTCAAAAGCTGTGGTGACTTTAGCACAGGTAAGCGCAGCAGAGAGTaGATAGTTGCTGATGGACACCATCTTTTCTGTGTACTCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: FKSCGDFSTGKRSRE*IVADGHHLFCVLHT Trigger: AGTGTGGAGTACACAGAAAAGATGGTGTCCATCAGCAACTATCCACTCTCTGCTGCGCTTACCTGTGCTAAAGTCACCACAGCTTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS TCA 90 bp | CAAACACAACTGGGTCACTACTGGGCACCAACTCTCGAATGTCACTaGTGTCTTCAACAGAAAAGGAAGTGCCAATTTTCATACAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: QTQLGHYWAPTLECH*CLQQKRKCQFSYSQ Trigger: TTGGCTGTATGAAAATTGGCACTTCCTTTTCTGTTGAAGACATCAGTGACATTCGAGAGTTGGTGCCCAGTAGTGACCCAGTTGTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS CCA 72 bp | CGGTTCAGGGGGCTGTCCATAAGCATCAGCAGGCTCTaGTGGGTGATGTCTGGTCTGACTTCCCCTGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RFRGLSISISRL*WVMSGLTSPGS Trigger: GGACCCAGGGGAAGTCAGACCAGACATCACCCACCAGAGCCTGCTGATGCTTATGGACAGCCCCCTGAACCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS TCA 72 bp | CTTAGGCGGCGTAGTCTCCCAGTCCTGCTCCTGCACTaGAAATCGCCGCTCACGAGGTTGGAAGCCACCACT | + |
|
Preference number: 6 (lower is better) Translates to: LRRRSLPVLLLH*KSPLTRLEATT Trigger: AGTGGTGGCTTCCAACCTCGTGAGCGGCGATTTTCAGTGCAGGAGCAGGACTGGGAGACTACGCCGCCTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004379.8 ENSMUST00000203238.2 |
||
| CDS CCA 72 bp | CAGGCTCTGGTGGGTGATGTCTGGTCTGACTTCCCCTaGGTCCCGTCCATTCTTCAACAACATGGACTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: QALVGDVWSDFP*VPSILQQHGLV Trigger: CACAAGTCCATGTTGTTGAAGAATGGACGGGACCCAGGGGAAGTCAGACCAGACATCACCCACCAGAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS TCA 72 bp | TCGGACACTGGATTCTTAATTACCTTCAATAGCTTCTaGGGGCCGTCGGCTGCTCGGACGCTCAGTTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SDTGFLITFNSF*GPSAARTLSLC Trigger: ACACAAACTGAGCGTCCGAGCAGCCGACGGCCCTCAGAAGCTATTGAAGGTAATTAAGAATCCAGTGTCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS CCA 72 bp | CCACAAAATCGGTCAAAGGTTCTAGGAATTCGAGTCTaGGGGTTCACTTCAATCAGCACGTTCTTCTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PQNRSKVLGIRV*GFTSISTFFCV Trigger: CACACAGAAGAACGTGCTGATTGAAGTGAACCCCCAGACTCGAATTCCTAGAACCTTTGACCGATTTTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004379.8 ENSMUST00000203238.2 |
||
| CDS CCA 72 bp | TGTGGTGACTTTAGCACAGGTAAGCGCAGCAGAGAGTaGATAGTTGCTGATGGACACCATCTTTTCTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: CGDFSTGKRSRE*IVADGHHLFCV Trigger: TACACAGAAAAGATGGTGTCCATCAGCAACTATCCACTCTCTGCTGCGCTTACCTGTGCTAAAGTCACCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||
| CDS TCA 72 bp | CTGGGTCACTACTGGGCACCAACTCTCGAATGTCACTaGTGTCTTCAACAGAAAAGGAAGTGCCAATTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LGHYWAPTLECH*CLQQKRKCQFS Trigger: TGAAAATTGGCACTTCCTTTTCTGTTGAAGACATCAGTGACATTCGAGAGTTGGTGCCCAGTAGTGACCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004379.8 |
||