Pregenerated sensors for EME1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039055Ensembl transcript IDs: ENSMUST00000039949.5
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATaGCTGTCCATGGCATCTCGCTTGCCGGGAGAGGAACATGAGTGC | + |
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Preference number: 1 (lower is better) Translates to: AFLLCAVRVNWDGVG*LSMASRLPGEEHEC Trigger: GCACTCATGTTCCTCTCCCGGCAAGCGAGATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| 3UTR CCA 90 bp | ATGTCTGAGTGGTCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTaGGATGGGGTGGGATGGCTGTCCATGGCATCTCGCTTGCCGGGA | + |
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Preference number: 1 (lower is better) Translates to: MSEWSAFLLCAVRVN*DGVGWLSMASRLPG Trigger: TCCCGGCAAGCGAGATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGACCACTCAGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| 3UTR GCA 90 bp | GGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCATCTCGCTTaGCGGGAGAGGAACATGAGTGCTATGGTGGAGGTAGATTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: GSTGMGWDGCPWHLA*RERNMSAMVEVDSS Trigger: ACTTGAATCTACCTCCACCATAGCACTCATGTTCCTCTCCCGGCAAGCGAGATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGCCATGGCATCTCGCTTaGCGGGAGAGGAACATGAGT | + |
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Preference number: 2 (lower is better) Translates to: SAFLLCAVRVNWDGVGWLPWHLA*RERNMS Trigger: ACTCATGTTCCTCTCCCGGCAAGCGAGATGCCATGG...CAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| 3UTR-3UTR TCA 90 bp | CCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCATCCTCTGTTCCCAGAGATaGGAGACTTGCTCCCTAACT | + |
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Preference number: 2 (lower is better) Translates to: PLCCEGQLGWGGMAVHGILCSQR*ETCSLT Trigger: AGTTAGGGAGCAAGTCTCTCATCTCTGGGAACAGAG...GATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| 3UTR-3UTR TCA 90 bp | CCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCATCGGAGGTAGATTCAAGTaGCTCAGCCTTCTCTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: PLCCEGQLGWGGMAVHGIGGRFK*LSLLCS Trigger: GGAACAGAGAAGGCTGAGTCACTTGAATCTACCTCC...GATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| 3UTR-3UTR GCA 90 bp | GAGTGGTCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGAGGAGAGGAACATGAGTaGTATGGTGGAGGTAGATTC | + |
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Preference number: 2 (lower is better) Translates to: EWSAFLLCAVRVNWDGVGGEEHE*YGGGRF Trigger: GAATCTACCTCCACCATAGCACTCATGTTCCTCTCC...TCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGACCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| 3UTR-3UTR TCA 90 bp | AAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCAGCTCCCTAGCTGGTTaGGGCAGCTCAGTGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: KYILHTYGDIMKTGVSLISSLAG*GSSVAG Trigger: CCCAGCCACTGAGCTGCCTCAACCAGCTAGGGAGCT...GATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| 3UTR CCA 72 bp | CTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATaGCTGTCCATGGCATCTCGCTTGCCGGGAGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: LCAVRVNWDGVG*LSMASRLPGEE Trigger: TTCCTCTCCCGGCAAGCGAGATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| 3UTR CCA 72 bp | TGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATaGGGTGGGATGGCTGTCCATGGCATCTCGCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: CLSPLCCEGQLG*GGMAVHGISLA Trigger: GGCAAGCGAGATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| 3UTR CCA 72 bp | TGGTCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTaGGATGGGGTGGGATGGCTGTCCATGGCATCTCGC | + |
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Preference number: 3 (lower is better) Translates to: WSAFLLCAVRVN*DGVGWLSMASR Trigger: GCGAGATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| 3UTR TCA 72 bp | CCATGTCTGAGTGGTCTGCCTTTCTCCTTTGTGCTGTaGGGGTCAACTGGGATGGGGTGGGATGGCTGTCCA | + |
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Preference number: 3 (lower is better) Translates to: PCLSGLPFSFVL*GSTGMGWDGCP Trigger: TGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGACCACTCAGACATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| 3UTR-3UTR CAA 90 bp | TCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGCCAGAGATGAGAGACTaGCTCCCTAACTGTACCAAG | + |
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Preference number: 3 (lower is better) Translates to: SAFLLCAVRVNWDGVGWLPEMRD*LPNCTK Trigger: CTTGGTACAGTTAGGGAGCAAGTCTCTCATCTCTGG...CAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | CCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCATCGACTGGCCCTGCTTGTaGGGGAGCTCCAGCTGCACT | + |
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Preference number: 4 (lower is better) Translates to: PLCCEGQLGWGGMAVHGIDWPCL*GSSSCT Trigger: AGTGCAGCTGGAGCTCCCCCACAAGCAGGGCCAGTC...GATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | CTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCACAACACGGCGGGAGGTaGCTGTCACACCTTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LLCAVRVNWDGVGWLSMAQHGGR*LSHLPH Trigger: GTGGGGAAGGTGTGACAGCCACCTCCCGCCGTGTTG...TGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR GCA 90 bp | GAGTGGTCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGGGGAGCTCCAGCTaGACTGGGGACACATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: EWSAFLLCAVRVNWDGVGWGSSS*TGDTWW Trigger: CCACCATGTGTCCCCAGTGCAGCTGGAGCTCCCCCA...TCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGACCACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR GCA 90 bp | CCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCATCCTGACTCGGTTCAGCTaGTGGATCTGCCGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PLCCEGQLGWGGMAVHGILTRFS*WICRLQ Trigger: CTGGAGGCGGCAGATCCAGCAGCTGAACCGAGTCAG...GATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | CCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCATCGATCCCGGAGCTTCTTaGAGGGTGCTTCAGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: PLCCEGQLGWGGMAVHGIDPGAS*RVLQPQ Trigger: CTGTGGCTGAAGCACCCTTCAAGAAGCTCCGGGATC...GATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | CTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCAGGGGATTCTGAGGCCTaGAGCATTTCTCCTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LLCAVRVNWDGVGWLSMAGDSEA*SISPGP Trigger: TGGACCAGGAGAAATGCTTCAGGCCTCAGAATCCCC...TGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | GTCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTCACCAGGAGCTGTGGTaGGGGATAGGCGTCCACAAT | + |
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Preference number: 4 (lower is better) Translates to: VCLSPLCCEGQLGWGGMAHQELW*GIGVHN Trigger: ATTGTGGACGCCTATCCCTCACCACAGCTCCTGGTG...AGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | CCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCATCCTTCAGGCATTCCTCTaGCCTCTGGGCTTTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: PLCCEGQLGWGGMAVHGILQAFL*PLGFEP Trigger: AGGCTCAAAGCCCAGAGGCCAGAGGAATGCCTGAAG...GATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | GAGTGGTCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGAACTCGGTTCAGCTGCTaGATCTGCCGCCTCCAGATC | + |
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Preference number: 4 (lower is better) Translates to: EWSAFLLCAVRVNWDGVGTRFSC*ICRLQI Trigger: GATCTGGAGGCGGCAGATCCAGCAGCTGAACCGAGT...TCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGACCACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | CTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCAATGTTCTTCGCCCTCTaGGGTGGCTTCCTGTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: LLCAVRVNWDGVGWLSMAMFFAL*GGFLLV Trigger: AACCAACAGGAAGCCACCTCAGAGGGCGAAGAACAT...TGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | TCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGGACTCTTGCCTCTGCTaGTGCTTCGCTTTGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: SAFLLCAVRVNWDGVGWLDSCLC*CFALAC Trigger: ACAGGCCAAAGCGAAGCATCAGCAGAGGCAAGAGTC...CAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | CTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCATTCTCTAAGGCACCGTaGAGGGGAACATCGGGAATC | + |
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Preference number: 4 (lower is better) Translates to: LLCAVRVNWDGVGWLSMAFSKAP*RGTSGI Trigger: GATTCCCGATGTTCCCCTCCACGGTGCCTTAGAGAA...TGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | CTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCACATTCCTCTGGCCTCTaGGCTTTGAGCCTCTTGATC | + |
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Preference number: 4 (lower is better) Translates to: LLCAVRVNWDGVGWLSMAHSSGL*ALSLLI Trigger: GATCAAGAGGCTCAAAGCCCAGAGGCCAGAGGAATG...TGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | CCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCATCTCCCCGTCTTTGCTGTaGCATCAGTTACAAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PLCCEGQLGWGGMAVHGISPSLL*HQLQSS Trigger: GGAGCTTTGTAACTGATGTCACAGCAAAGACGGGGA...GATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR GCA 90 bp | CCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCATCATTTGTTTTGGAGACTaGCAGCTCCCTGCAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: PLCCEGQLGWGGMAVHGIICFGD*QLPAGS Trigger: GCTACCTGCAGGGAGCTGGCAGTCTCCAAAACAAAT...GATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | GTCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGGTCGGAATTTGTTTTaGAGACTGCCAGCTCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: VCLSPLCCEGQLGWGGMAGRNLF*RLPAPC Trigger: GCAGGGAGCTGGCAGTCTCCAAAACAAATTCCGACC...AGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | GTCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCACAATCACCAGTaGCAATGCTTTCCCCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: VCLSPLCCEGQLGWGGMAVHNHQ*QCFPRL Trigger: AAGACGGGGAAAGCATTGTCACTGGTGATTGTGGAC...AGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | GTCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGGAAGAAGGAAAAGGTaGCTTGATCCCGGAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VCLSPLCCEGQLGWGGMAGRRKR*LDPGAS Trigger: AGAAGCTCCGGGATCAAGTCACCTTTTCCTTCTTCC...AGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR GCA 90 bp | GAGTGGTCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGACACAGCCTTTGTAAATaGACAGGTGAAGTCCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: EWSAFLLCAVRVNWDGVGHSLCK*TGEVRQ Trigger: CTGGCGGACTTCACCTGTGCATTTACAAAGGCTGTG...TCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGACCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR GCA 90 bp | GAGTGGTCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGAGAGCTTCTTGAAGGGTaGTTCAGCCACAGCCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: EWSAFLLCAVRVNWDGVGELLEG*FSHSLC Trigger: ACAAAGGCTGTGGCTGAAGCACCCTTCAAGAAGCTC...TCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGACCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | CCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCATCGAGGTGGCTTCCTGTTaGTTGAAGATGGTTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PLCCEGQLGWGGMAVHGIEVASC*LKMVPS Trigger: AGAAGGAACCATCTTCAACCAACAGGAAGCCACCTC...GATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | CTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCACAACACCAGGATTGTTaGCTCTTCCATCCAGTCATC | + |
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Preference number: 4 (lower is better) Translates to: LLCAVRVNWDGVGWLSMAQHQDC*LFHPVI Trigger: GATGACTGGATGGAAGAGCCAACAATCCTGGTGTTG...TGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | CCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCATCCCTTTTCCAGTCACATaGTGCGCTGGCATTATTTTG | + |
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Preference number: 4 (lower is better) Translates to: PLCCEGQLGWGGMAVHGIPFPVT*CAGIIL Trigger: CAAAATAATGCCAGCGCACCATGTGACTGGAAAAGG...GATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | AAGCCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCCACAGCTGCACTCCATaGCCTGCAGCGCTCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KPTRRQEFTLTSRFDAYFHSCTP*PAALPG Trigger: TCCTGGGAGCGCTGCAGGCCATGGAGTGCAGCTGTG...GAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| 3UTR CAA 72 bp | GTGACTCAGCCTTCTCTGTTCCCAGAGATGAGAGACTaGCTCCCTAACTGTACCAAGGAGGTACTTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VTQPSLFPEMRD*LPNCTKEVLLA Trigger: GGCCAGAAGTACCTCCTTGGTACAGTTAGGGAGCAAGTCTCTCATCTCTGGGAACAGAGAAGGCTGAGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | TCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCAAAAAGGCAAATGTaGGCAGGTCCTCAGAATCAC | + |
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Preference number: 4 (lower is better) Translates to: SAFLLCAVRVNWDGVGWLSKRQM*AGPQNH Trigger: GTGATTCTGAGGACCTGCCCACATTTGCCTTTTTGA...CAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | CTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCAGCGCTGGCATTATTTTaGCCATCCAAACCTGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: LLCAVRVNWDGVGWLSMAALALF*PSKPVL Trigger: TAAAACAGGTTTGGATGGCCAAAATAATGCCAGCGC...TGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | AAGCCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCACCTTTGAGGCCTGGTaGTGGAGGACAGGAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: KPTRRQEFTLTSRFDAYFTFEAW*WRTGGF Trigger: GAAGCCTCCTGTCCTCCATCACCAGGCCTCAAAGGT...GAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | AAGCCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCCACATGGTGGACCTTTaGGGCCTGGTGATGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: KPTRRQEFTLTSRFDAYFHMVDL*GLVMED Trigger: GTCCTCCATCACCAGGCCTCAAAGGTCCACCATGTG...GAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | AAGCCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCAGTCCCCTGCCGGACTaGTCCACTTTCATCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: KPTRRQEFTLTSRFDAYFSPLPD*STFIPP Trigger: TGGAGGGATGAAAGTGGACCAGTCCGGCAGGGGACT...GAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR GCA 90 bp | AAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCCTGCACTCCATGGCCTaGAGCGCTCCCAGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KYILHTYGDIMKTGVSLILHSMA*SAPRSW Trigger: CCAGCTCCTGGGAGCGCTGCAGGCCATGGAGTGCAG...GATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | AAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCTGGCCATCTCCGAGCTaGCTCGGTTCAGCTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KYILHTYGDIMKTGVSLIWPSPS*LGSAAG Trigger: TCCAGCAGCTGAACCGAGTCAGCTCGGAGATGGCCA...GATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | AAGCCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCGGGAATCTTTGGCCATaGTTGCCTTTTCCAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: KPTRRQEFTLTSRFDAYFGNLWP*LPFPVT Trigger: TGTGACTGGAAAAGGCAACCATGGCCAAAGATTCCC...GAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | ATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCATAGCTTCCTCCTCCTCCAAGTaGTGCTTCGAGGTATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ILHTYGDIMKTGVSLIIASSSSK*CFEVWP Trigger: AGGCCATACCTCGAAGCATCACTTGGAGGAGGAGGA...AGCTATGATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR GCA 90 bp | AAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCGTTTTCCTTCCTGCTTaGCTGTCCCGGTCGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KYILHTYGDIMKTGVSLIVFLPA*LSRSPA Trigger: TGCTGGCGACCGGGACAGGCAAGCAGGAAGGAAAAC...GATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR GCA 90 bp | AAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCTTCAGCTGCTGGATCTaGCGCCTCCAGATCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KYILHTYGDIMKTGVSLIFSCWI*RLQISA Trigger: GGCACTGATCTGGAGGCGGCAGATCCAGCAGCTGAA...GATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR GCA 90 bp | AAGCCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCTGCTTTCCCCGTCTTTaGTGTGACATCAGTTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: KPTRRQEFTLTSRFDAYFCFPRL*CDISYK Trigger: TTTGTAACTGATGTCACAGCAAAGACGGGGAAAGCA...GAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | ATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCATAGCTGGTAGCCTGGTAGGTTaGAAGCTGACGACACTGATC | + |
|
Preference number: 4 (lower is better) Translates to: ILHTYGDIMKTGVSLIIAGSLVG*KLTTLI Trigger: GATCAGTGTCGTCAGCTTCCAACCTACCAGGCTACC...AGCTATGATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | ATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCATAGCTTCAAAAGCTTACATGTaGTCCTCTCAGCTAGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILHTYGDIMKTGVSLIIASKAYM*SSQLGG Trigger: TCCCCCTAGCTGAGAGGATCACATGTAAGCTTTTGA...AGCTATGATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | ATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCATAGCTTTTATTTGCCATTCCTaGTTTCCTTCTCCTCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILHTYGDIMKTGVSLIIAFICHS*FPSPRG Trigger: CCCCCGAGGAGAAGGAAATCAGGAATGGCAAATAAA...AGCTATGATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | ATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCATAGCTTGGCTTCCTGTTGGTTaGAGATGGTTCCTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILHTYGDIMKTGVSLIIAWLPVG*RWFLLQ Trigger: TTGAAGAAGGAACCATCTTCAACCAACAGGAAGCCA...AGCTATGATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR TCA 90 bp | ATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCATAGCTCTTCAGAATCTGAGGTaGCAACCACTATGTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ILHTYGDIMKTGVSLIIALQNLR*QPLCSS Trigger: CGAAGAACATAGTGGTTGTCACCTCAGATTCTGAAG...AGCTATGATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CCA 90 bp | AAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCCCGTCTGAATATGCTTaGTTCTCTTCTTGGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KYILHTYGDIMKTGVSLIPSEYA*FSSWVE Trigger: CTCTACCCAAGAAGAGAACCAAGCATATTCAGACGG...GATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 90 bp | CGAGCTGACTCGGTTCAGCTGCTGGATCTGCCGCCTCCAGATCAGTaGCAGTCCCCTGCCGGACTGGTCCACTTTCATCCCTCCAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RADSVQLLDLPPPDQ*QSPAGLVHFHPSSP Trigger: TGGGCTGGAGGGATGAAAGTGGACCAGTCCGGCAGGGGACTGGCACTGATCTGGAGGCGGCAGATCCAGCAGCTGAACCGAGTCAGCTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 90 bp | GCGTCCACAATAGCACTGGCCATCTCCGAGCTGACTCGGTTCAGCTaGTGGATCTGCCGCCTCCAGATCAGTGCCAGTCCCCTGCCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ASTIALAISELTRFS*WICRLQISASPLPD Trigger: GTCCGGCAGGGGACTGGCACTGATCTGGAGGCGGCAGATCCAGCAGCTGAACCGAGTCAGCTCGGAGATGGCCAGTGCTATTGTGGACGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 90 bp | ATAGCACTGGCCATCTCCGAGCTGACTCGGTTCAGCTGCTGGATCTaGCGCCTCCAGATCAGTGCCAGTCCCCTGCCGGACTGGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: IALAISELTRFSCWI*RLQISASPLPDWST Trigger: AGTGGACCAGTCCGGCAGGGGACTGGCACTGATCTGGAGGCGGCAGATCCAGCAGCTGAACCGAGTCAGCTCGGAGATGGCCAGTGCTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 90 bp | TCCACAATAGCACTGGCCATCTCCGAGCTGACTCGGTTCAGCTGCTaGATCTGCCGCCTCCAGATCAGTGCCAGTCCCCTGCCGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: STIALAISELTRFSC*ICRLQISASPLPDW Trigger: CCAGTCCGGCAGGGGACTGGCACTGATCTGGAGGCGGCAGATCCAGCAGCTGAACCGAGTCAGCTCGGAGATGGCCAGTGCTATTGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CAA 90 bp | CCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCATCTCTGACTGGCCCTGCTaGTGGGGGAGCTCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLCCEGQLGWGGMAVHGISDWPC*WGSSSC Trigger: GCAGCTGGAGCTCCCCCACAAGCAGGGCCAGTCAGA...GATGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 90 bp | GGTTCAGCTGCTGGATCTGCCGCCTCCAGATCAGTGCCAGTCCCCTaGCGGACTGGTCCACTTTCATCCCTCCAGCCCAGTCTTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSAAGSAASRSVPVP*RTGPLSSLQPSLSP Trigger: TGGAGAAAGACTGGGCTGGAGGGATGAAAGTGGACCAGTCCGGCAGGGGACTGGCACTGATCTGGAGGCGGCAGATCCAGCAGCTGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 90 bp | AGCTCTGTCCTCCTCCTCCTCCAAGTGATGCTTCGAGGTATGGCCTaGACTTCAATCACACAGCTGCACTCCATGGCCTGCAGCGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSVLLLLQVMLRGMA*TSITQLHSMACSAP Trigger: GGGAGCGCTGCAGGCCATGGAGTGCAGCTGTGTGATTGAAGTCCAGGCCATACCTCGAAGCATCACTTGGAGGAGGAGGAGGACAGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 90 bp | GAAGGTAGATCCGCCTGGATAATTCTGGCCCAACACGGCGGGAGGTaGCTGTCACACCTTCCCCACGTCGCACTTGTATGTCAGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EGRSAWIILAQHGGR*LSHLPHVALVCQPA Trigger: TGCTGGCTGACATACAAGTGCGACGTGGGGAAGGTGTGACAGCCACCTCCCGCCGTGTTGGGCCAGAATTATCCAGGCGGATCTACCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CAA 90 bp | CTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCATGGCAACACATGGTGGACCTTaGAGGCCTGGTGATGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLCAVRVNWDGVGWLSMATHGGP*RPGDGG Trigger: TCCTCCATCACCAGGCCTCAAAGGTCCACCATGTGT...TGCCATGGACAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CAA 90 bp | TCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGTCCCGTGCTAGACTCTaGCCTCTGCTGATGCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SAFLLCAVRVNWDGVGWLSRARL*PLLMLR Trigger: GCGAAGCATCAGCAGAGGCAAGAGTCTAGCACGGGA...CAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS TCA 90 bp | TTGCTCAGAGAAACACCGCTGATAAGCCTGCACCAGGAGCTGTGGTaGGGGATAGGCGTCCACAATAGCACTGGCCATCTCCGAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLRETPLISLHQELW*GIGVHNSTGHLRAD Trigger: GTCAGCTCGGAGATGGCCAGTGCTATTGTGGACGCCTATCCCTCACCACAGCTCCTGGTGCAGGCTTATCAGCGGTGTTTCTCTGAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 90 bp | CACCATCCACGCCTGGGCTTCTGTATAAAGCTGCAGATCCACCAGTaGCTTCTCCATGTCTGCCCTGGACACCATGAGTCCCGTGCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: HHPRLGFCIKLQIHQ*LLHVCPGHHESRAR Trigger: TCTAGCACGGGACTCATGGTGTCCAGGGCAGACATGGAGAAGGCACTGGTGGATCTGCAGCTTTATACAGAAGCCCAGGCGTGGATGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 90 bp | ATCCCGGAGCTTCTTGAAGGGTGCTTCAGCCACAGCCTTTGTAAATaGACAGGTGAAGTCCGCCAGCTCCTTCCAGCTCTGCACCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: IPELLEGCFSHSLCK*TGEVRQLLPALHHP Trigger: TGGATGGTGCAGAGCTGGAAGGAGCTGGCGGACTTCACCTGTGCATTTACAAAGGCTGTGGCTGAAGCACCCTTCAAGAAGCTCCGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 90 bp | GAGAGCCTCCGCTCTGGACCGTCTGAATATGCTTGGTTCTCTTCTTaGGTAGAGGTCGGTCGGAATTTGTTTTGGAGACTGCCAGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ESLRSGPSEYAWFSS*VEVGRNLFWRLPAP Trigger: GGGAGCTGGCAGTCTCCAAAACAAATTCCGACCGACCTCTACCCAAGAAGAGAACCAAGCATATTCAGACGGTCCAGAGCGGAGGCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 90 bp | GGCCATGGACATGAAGACCTCTGCCAGGACCAACACCAGGATTGTTaGCTCTTCCATCCAGTCATCTCCATCCTCTACCAGCTCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GHGHEDLCQDQHQDC*LFHPVISILYQLCP Trigger: AGGACAGAGCTGGTAGAGGATGGAGATGACTGGATGGAAGAGCCAACAATCCTGGTGTTGGTCCTGGCAGAGGTCTTCATGTCCATGGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CAA 90 bp | TCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTGGAACATCGGGAATCTTaGGCCATGGTTGCCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAFLLCAVRVNWDGVGWLEHRES*AMVAFS Trigger: GGAAAAGGCAACCATGGCCAAAGATTCCCGATGTTC...CAGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CAA 90 bp | GAGTGGTCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGACCAACACCAGGATTGTaGGCTCTTCCATCCAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: EWSAFLLCAVRVNWDGVGPTPGL*ALPSSH Trigger: ATGACTGGATGGAAGAGCCAACAATCCTGGTGTTGG...TCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGACCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CAA 90 bp | GTCTGCCTTTCTCCTTTGTGCTGTGAGGGTCAACTGGGATGGGGTGGGATGGCTTTCCCCACGTCGCACTaGTATGTCAGCCAGCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: VCLSPLCCEGQLGWGGMAFPTSH*YVSQQI Trigger: AATTTGCTGGCTGACATACAAGTGCGACGTGGGGAA...AGCCATCCCACCCCATCCCAGTTGACCCTCACAGCACAAAGGAGAAAGGCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 90 bp | GCCAGCATCCCTGAGAGCCTCCGCTCTGGACCGTCTGAATATGCTTaGTTCTCTTCTTGGGTAGAGGTCGGTCGGAATTTGTTTTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASIPESLRSGPSEYA*FSSWVEVGRNLFWR Trigger: TCTCCAAAACAAATTCCGACCGACCTCTACCCAAGAAGAGAACCAAGCATATTCAGACGGTCCAGAGCGGAGGCTCTCAGGGATGCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS TCA 90 bp | CCTGGTCCACAATCACCAGTGACAATGCTTTCCCCGTCTTTGCTGTaGCATCAGTTACAAAGCTCCGAAGGGTCTCCTTCCCTTTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PGPQSPVTMLSPSLL*HQLQSSEGSPSLSR Trigger: CCGAGAAAGGGAAGGAGACCCTTCGGAGCTTTGTAACTGATGTCACAGCAAAGACGGGGAAAGCATTGTCACTGGTGATTGTGGACCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 90 bp | CAGGAAGAAGGAAAAGGTGACTTGATCCCGGAGCTTCTTGAAGGGTaGTTCAGCCACAGCCTTTGTAAATGCACAGGTGAAGTCCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QEEGKGDLIPELLEG*FSHSLCKCTGEVRQ Trigger: CTGGCGGACTTCACCTGTGCATTTACAAAGGCTGTGGCTGAAGCACCCTTCAAGAAGCTCCGGGATCAAGTCACCTTTTCCTTCTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 90 bp | GCTTCCTGTTGGTTGAAGATGGTTCCTTCTTCAAAAAGGCAAATGTaGGCAGGTCCTCAGAATCACTCTCCGTGGAGAGGCGAGACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASCWLKMVPSSKRQM*AGPQNHSPWRGETG Trigger: CCCTGTCTCGCCTCTCCACGGAGAGTGATTCTGAGGACCTGCCCACATTTGCCTTTTTGAAGAAGGAACCATCTTCAACCAACAGGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CAA 90 bp | AAGCCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCTGTTTTCCTTCCTGCTaGCCTGTCCCGGTCGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KPTRRQEFTLTSRFDAYFCFPSC*PVPVAS Trigger: GCTGGCGACCGGGACAGGCAAGCAGGAAGGAAAACA...GAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS TCA 90 bp | GACAACCACTATGTTCTTCGCCCTCTGAGGTGGCTTCCTGTTGGTTaGAGATGGTTCCTTCTTCAAAAAGGCAAATGTGGGCAGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: DNHYVLRPLRWLPVG*RWFLLQKGKCGQVL Trigger: GAGGACCTGCCCACATTTGCCTTTTTGAAGAAGGAACCATCTTCAACCAACAGGAAGCCACCTCAGAGGGCGAAGAACATAGTGGTTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS TCA 90 bp | TTGCCTCTGCTGATGCTTCGCTTTGGCCTGTTTATTTGCCATTCCTaGTTTCCTTCTCCTCGGGGGATTCTGAGGCCTGAAGCATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPLLMLRFGLFICHS*FPSPRGILRPEAFL Trigger: GAGAAATGCTTCAGGCCTCAGAATCCCCCGAGGAGAAGGAAATCAGGAATGGCAAATAAACAGGCCAAAGCGAAGCATCAGCAGAGGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS TCA 90 bp | GGGATTCTGAGGCCTGAAGCATTTCTCCTGGTCCACAATCACCAGTaGCAATGCTTTCCCCGTCTTTGCTGTGACATCAGTTACAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GILRPEAFLLVHNHQ*QCFPRLCCDISYKA Trigger: AGCTTTGTAACTGATGTCACAGCAAAGACGGGGAAAGCATTGTCACTGGTGATTGTGGACCAGGAGAAATGCTTCAGGCCTCAGAATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS TCA 90 bp | TATTTGCCATTCCTGATTTCCTTCTCCTCGGGGGATTCTGAGGCCTaGAGCATTTCTCCTGGTCCACAATCACCAGTGACAATGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YLPFLISFSSGDSEA*SISPGPQSPVTMLS Trigger: GGAAAGCATTGTCACTGGTGATTGTGGACCAGGAGAAATGCTTCAGGCCTCAGAATCCCCCGAGGAGAAGGAAATCAGGAATGGCAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS TCA 90 bp | GCCTGTTTATTTGCCATTCCTGATTTCCTTCTCCTCGGGGGATTCTaGGGCCTGAAGCATTTCTCCTGGTCCACAATCACCAGTGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: ACLFAIPDFLLLGGF*GLKHFSWSTITSDN Trigger: ATTGTCACTGGTGATTGTGGACCAGGAGAAATGCTTCAGGCCTCAGAATCCCCCGAGGAGAAGGAAATCAGGAATGGCAAATAAACAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CAA 90 bp | AAGCCAACCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCTGCGCTGGCATTATTTaGGCCATCCAAACCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KPTRRQEFTLTSRFDAYFCAGII*AIQTCF Trigger: AAAACAGGTTTGGATGGCCAAAATAATGCCAGCGCA...GAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGGGTTGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CAA 90 bp | ATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCATAGCTCGGTCGGAATTTGTTTaGGAGACTGCCAGCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILHTYGDIMKTGVSLIIARSEFV*ETASSL Trigger: CAGGGAGCTGGCAGTCTCCAAAACAAATTCCGACCG...AGCTATGATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CAA 90 bp | ATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCATAGCTTCTGGCCTCTGGGCTTaGAGCCTCTTGATCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ILHTYGDIMKTGVSLIIASGLWA*SLLIIS Trigger: AGAGATGATCAAGAGGCTCAAAGCCCAGAGGCCAGA...AGCTATGATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS-3UTR CAA 90 bp | AAATACATACTACATACATATGGTGACATCATGAAAACAGGAGTCAGCCTCATCGTGGCTTCCTGTTGGTaGAAGATGGTTCCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KYILHTYGDIMKTGVSLIVASCW*KMVPSS Trigger: TGAAGAAGGAACCATCTTCAACCAACAGGAAGCCAC...GATGAGGCTGACTCCTGTTTTCATGATGTCACCATATGTATGTAGTATGTATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 72 bp | GCCATCTCCGAGCTGACTCGGTTCAGCTGCTGGATCTaGCGCCTCCAGATCAGTGCCAGTCCCCTGCCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: AISELTRFSCWI*RLQISASPLPD Trigger: GTCCGGCAGGGGACTGGCACTGATCTGGAGGCGGCAGATCCAGCAGCTGAACCGAGTCAGCTCGGAGATGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 72 bp | CACTCTGACTGGCCCTGCTTGTGGGGGAGCTCCAGCTaGACTGGGGACACATGGTGGACCTTTGAGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HSDWPCLWGSSS*TGDTWWTFEAW Trigger: CCAGGCCTCAAAGGTCCACCATGTGTCCCCAGTGCAGCTGGAGCTCCCCCACAAGCAGGGCCAGTCAGAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 72 bp | GCTGGATCTGCCGCCTCCAGATCAGTGCCAGTCCCCTaGCGGACTGGTCCACTTTCATCCCTCCAGCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AGSAASRSVPVP*RTGPLSSLQPS Trigger: ACTGGGCTGGAGGGATGAAAGTGGACCAGTCCGGCAGGGGACTGGCACTGATCTGGAGGCGGCAGATCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 72 bp | GCACTGGCCATCTCCGAGCTGACTCGGTTCAGCTGCTaGATCTGCCGCCTCCAGATCAGTGCCAGTCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALAISELTRFSC*ICRLQISASPL Trigger: CAGGGGACTGGCACTGATCTGGAGGCGGCAGATCCAGCAGCTGAACCGAGTCAGCTCGGAGATGGCCAGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 72 bp | TCGGTTCAGCTGCTGGATCTGCCGCCTCCAGATCAGTaGCAGTCCCCTGCCGGACTGGTCCACTTTCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: SVQLLDLPPPDQ*QSPAGLVHFHP Trigger: GGGATGAAAGTGGACCAGTCCGGCAGGGGACTGGCACTGATCTGGAGGCGGCAGATCCAGCAGCTGAACCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 72 bp | TCTTTCATGCTGCCTCGGGGTGTTTTCCTTCCTGCTTaGCTGTCCCGGTCGCCAGCATCCCTGAGAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SFMLPRGVFLPA*LSRSPASLRAS Trigger: GGAGGCTCTCAGGGATGCTGGCGACCGGGACAGGCAAGCAGGAAGGAAAACACCCCGAGGCAGCATGAAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CAA 90 bp | GCTTGTGGGGGAGCTCCAGCTGCACTGGGGACACATGGTGGACCTTaGAGGCCTGGTGATGGAGGACAGGAGGCTTCAGAATCTGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: ACGGAPAALGTHGGP*RPGDGGQEASESEV Trigger: CACCTCAGATTCTGAAGCCTCCTGTCCTCCATCACCAGGCCTCAAAGGTCCACCATGTGTCCCCAGTGCAGCTGGAGCTCCCCCACAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 72 bp | TCCGCCTGGATAATTCTGGCCCAACACGGCGGGAGGTaGCTGTCACACCTTCCCCACGTCGCACTTGTATGT | + |
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Preference number: 6 (lower is better) Translates to: SAWIILAQHGGR*LSHLPHVALVC Trigger: ACATACAAGTGCGACGTGGGGAAGGTGTGACAGCCACCTCCCGCCGTGTTGGGCCAGAATTATCCAGGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CAA 72 bp | TTCTTTCATGCTGCCTCGGGGTGTTTTCCTTCCTGCTaGCCTGTCCCGGTCGCCAGCATCCCTGAGAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: FFHAASGCFPSC*PVPVASIPESL Trigger: GAGGCTCTCAGGGATGCTGGCGACCGGGACAGGCAAGCAGGAAGGAAAACACCCCGAGGCAGCATGAAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 72 bp | CTGGTTGCGCTGTGGTCATTTGAAGGTAGATCCGCCTaGATAATTCTGGCCCAACACGGCGGGAGGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LVALWSFEGRSA*IILAQHGGRWL Trigger: CAGCCACCTCCCGCCGTGTTGGGCCAGAATTATCCAGGCGGATCTACCTTCAAATGACCACAGCGCAACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS TCA 72 bp | GAAACACCGCTGATAAGCCTGCACCAGGAGCTGTGGTaGGGGATAGGCGTCCACAATAGCACTGGCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: ETPLISLHQELW*GIGVHNSTGHL Trigger: GAGATGGCCAGTGCTATTGTGGACGCCTATCCCTCACCACAGCTCCTGGTGCAGGCTTATCAGCGGTGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 72 bp | GGCACCGTGGAGGGGAACATCGGGAATCTTTGGCCATaGTTGCCTTTTCCAGTCACATGGTGCGCTGGCATT | + |
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Preference number: 6 (lower is better) Translates to: GTVEGNIGNLWP*LPFPVTWCAGI Trigger: AATGCCAGCGCACCATGTGACTGGAAAAGGCAACCATGGCCAAAGATTCCCGATGTTCCCCTCCACGGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 72 bp | CTCCTCCTCCTCCAAGTGATGCTTCGAGGTATGGCCTaGACTTCAATCACACAGCTGCACTCCATGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LLLLQVMLRGMA*TSITQLHSMAC Trigger: GCAGGCCATGGAGTGCAGCTGTGTGATTGAAGTCCAGGCCATACCTCGAAGCATCACTTGGAGGAGGAGGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CAA 72 bp | TCTCTAAGGCACCGTGGAGGGGAACATCGGGAATCTTaGGCCATGGTTGCCTTTTCCAGTCACATGGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: SLRHRGGEHRES*AMVAFSSHMVR Trigger: GCGCACCATGTGACTGGAAAAGGCAACCATGGCCAAAGATTCCCGATGTTCCCCTCCACGGTGCCTTAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS TCA 72 bp | CTGGTGATGGAGGACAGGAGGCTTCAGAATCTGAGGTaGCAACCACTATGTTCTTCGCCCTCTGAGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LVMEDRRLQNLR*QPLCSSPSEVA Trigger: AGCCACCTCAGAGGGCGAAGAACATAGTGGTTGTCACCTCAGATTCTGAAGCCTCCTGTCCTCCATCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 72 bp | ATCTGTAAAAGCACTGGATCCAGCACCACCACGATGTaGTTCAGGCATTCCTCTGGCCTCTGGGCTTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: ICKSTGSSTTTM*FRHSSGLWALS Trigger: GCTCAAAGCCCAGAGGCCAGAGGAATGCCTGAAGCACATCGTGGTGGTGCTGGATCCAGTGCTTTTACAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 72 bp | ATAAAGCTGCAGATCCACCAGTGCCTTCTCCATGTCTaGCCTGGACACCATGAGTCCCGTGCTAGACTCTTG | + |
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Preference number: 6 (lower is better) Translates to: IKLQIHQCLLHV*PGHHESRARLL Trigger: CAAGAGTCTAGCACGGGACTCATGGTGTCCAGGGCAGACATGGAGAAGGCACTGGTGGATCTGCAGCTTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 72 bp | CTTCTTGAAGGGTGCTTCAGCCACAGCCTTTGTAAATaGACAGGTGAAGTCCGCCAGCTCCTTCCAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LLEGCFSHSLCK*TGEVRQLLPAL Trigger: CAGAGCTGGAAGGAGCTGGCGGACTTCACCTGTGCATTTACAAAGGCTGTGGCTGAAGCACCCTTCAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CAA 90 bp | CAGCACTCTTCTCTAAGGCACCGTGGAGGGGAACATCGGGAATCTTaGGCCATGGTTGCCTTTTCCAGTCACATGGTGCGCTGGCATTAT | + |
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Preference number: 6 (lower is better) Translates to: QHSSLRHRGGEHRES*AMVAFSSHMVRWHY Trigger: ATAATGCCAGCGCACCATGTGACTGGAAAAGGCAACCATGGCCAAAGATTCCCGATGTTCCCCTCCACGGTGCCTTAGAGAAGAGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CAA 90 bp | TTCCCCACGTCGCACTTGTATGTCAGCCAGCAAATTCTGACGTTCTaGCTCAGAGAAACACCGCTGATAAGCCTGCACCAGGAGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: FPTSHLYVSQQILTF*LRETPLISLHQELW Trigger: CCACAGCTCCTGGTGCAGGCTTATCAGCGGTGTTTCTCTGAGCAAGAACGTCAGAATTTGCTGGCTGACATACAAGTGCGACGTGGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 72 bp | CCGTGGAGGGGAACATCGGGAATCTTTGGCCATGGTTaGCTTTTCCAGTCACATGGTGCGCTGGCATTATTT | + |
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Preference number: 6 (lower is better) Translates to: PWRGTSGIFGHG*LFQSHGALALF Trigger: AAATAATGCCAGCGCACCATGTGACTGGAAAAGGCAACCATGGCCAAAGATTCCCGATGTTCCCCTCCACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 72 bp | TCCTCATCATTTGCAGCACTCTTCTCTAAGGCACCGTaGAGGGGAACATCGGGAATCTTTGGCCATGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: SSSFAALFSKAP*RGTSGIFGHGC Trigger: GCAACCATGGCCAAAGATTCCCGATGTTCCCCTCCACGGTGCCTTAGAGAAGAGTGCTGCAAATGATGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 72 bp | CATGAAGACCTCTGCCAGGACCAACACCAGGATTGTTaGCTCTTCCATCCAGTCATCTCCATCCTCTACCAG | + |
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Preference number: 6 (lower is better) Translates to: HEDLCQDQHQDC*LFHPVISILYQ Trigger: CTGGTAGAGGATGGAGATGACTGGATGGAAGAGCCAACAATCCTGGTGTTGGTCCTGGCAGAGGTCTTCATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CAA 72 bp | ACCGTGGAGGGGAACATCGGGAATCTTTGGCCATGGTaGCCTTTTCCAGTCACATGGTGCGCTGGCATTATT | + |
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Preference number: 6 (lower is better) Translates to: TVEGNIGNLWPW*PFPVTWCAGII Trigger: AATAATGCCAGCGCACCATGTGACTGGAAAAGGCAACCATGGCCAAAGATTCCCGATGTTCCCCTCCACGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CAA 72 bp | AGCCCAGTCTTTCTCCAGGAAGAAGGAAAAGGTGACTaGATCCCGGAGCTTCTTGAAGGGTGCTTCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SPVFLQEEGKGD*IPELLEGCFSH Trigger: GTGGCTGAAGCACCCTTCAAGAAGCTCCGGGATCAAGTCACCTTTTCCTTCTTCCTGGAGAAAGACTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CAA 90 bp | TTGGAAGCTGACGACACTGATCGTCTAAGAGAGAGTCCTCATCATTaGCAGCACTCTTCTCTAAGGCACCGTGGAGGGGAACATCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LEADDTDRLRESPHH*QHSSLRHRGGEHRE Trigger: TTCCCGATGTTCCCCTCCACGGTGCCTTAGAGAAGAGTGCTGCAAATGATGAGGACTCTCTCTTAGACGATCAGTGTCGTCAGCTTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS TCA 72 bp | TTCCTGATTTCCTTCTCCTCGGGGGATTCTGAGGCCTaGAGCATTTCTCCTGGTCCACAATCACCAGTGACA | + |
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Preference number: 6 (lower is better) Translates to: FLISFSSGDSEA*SISPGPQSPVT Trigger: TGTCACTGGTGATTGTGGACCAGGAGAAATGCTTCAGGCCTCAGAATCCCCCGAGGAGAAGGAAATCAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS TCA 72 bp | TTTGCCATTCCTGATTTCCTTCTCCTCGGGGGATTCTaGGGCCTGAAGCATTTCTCCTGGTCCACAATCACC | + |
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Preference number: 6 (lower is better) Translates to: FAIPDFLLLGGF*GLKHFSWSTIT Trigger: GGTGATTGTGGACCAGGAGAAATGCTTCAGGCCTCAGAATCCCCCGAGGAGAAGGAAATCAGGAATGGCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS TCA 72 bp | GAATCTGAGGTGACAACCACTATGTTCTTCGCCCTCTaGGGTGGCTTCCTGTTGGTTGAAGATGGTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: ESEVTTTMFFAL*GGFLLVEDGSF Trigger: GAAGGAACCATCTTCAACCAACAGGAAGCCACCTCAGAGGGCGAAGAACATAGTGGTTGTCACCTCAGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS TCA 72 bp | CAATCACCAGTGACAATGCTTTCCCCGTCTTTGCTGTaGCATCAGTTACAAAGCTCCGAAGGGTCTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: QSPVTMLSPSLL*HQLQSSEGSPS Trigger: GGAAGGAGACCCTTCGGAGCTTTGTAACTGATGTCACAGCAAAGACGGGGAAAGCATTGTCACTGGTGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS TCA 72 bp | AGGCCTGAAGCATTTCTCCTGGTCCACAATCACCAGTaGCAATGCTTTCCCCGTCTTTGCTGTGACATCAGT | + |
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Preference number: 6 (lower is better) Translates to: RPEAFLLVHNHQ*QCFPRLCCDIS Trigger: ACTGATGTCACAGCAAAGACGGGGAAAGCATTGTCACTGGTGATTGTGGACCAGGAGAAATGCTTCAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS GCA 72 bp | GGAAAAGGTGACTTGATCCCGGAGCTTCTTGAAGGGTaGTTCAGCCACAGCCTTTGTAAATGCACAGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: GKGDLIPELLEG*FSHSLCKCTGE Trigger: TTCACCTGTGCATTTACAAAGGCTGTGGCTGAAGCACCCTTCAAGAAGCTCCGGGATCAAGTCACCTTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 72 bp | TGGTTGAAGATGGTTCCTTCTTCAAAAAGGCAAATGTaGGCAGGTCCTCAGAATCACTCTCCGTGGAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: WLKMVPSSKRQM*AGPQNHSPWRG Trigger: GCCTCTCCACGGAGAGTGATTCTGAGGACCTGCCCACATTTGCCTTTTTGAAGAAGGAACCATCTTCAACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CAA 72 bp | TTAAGTGAGGAGCTAGAGAGCTCAGGGCACAGCTGCTaGCTCGTCAAAAGCTTACATGTGATCCTCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LSEELESSGHSC*LVKSLHVILSA Trigger: AGCTGAGAGGATCACATGTAAGCTTTTGACGAGCAAGCAGCTGTGCCCTGAGCTCTCTAGCTCCTCACTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CAA 72 bp | TCGCACTTGTATGTCAGCCAGCAAATTCTGACGTTCTaGCTCAGAGAAACACCGCTGATAAGCCTGCACCAG | + |
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Preference number: 6 (lower is better) Translates to: SHLYVSQQILTF*LRETPLISLHQ Trigger: CTGGTGCAGGCTTATCAGCGGTGTTTCTCTGAGCAAGAACGTCAGAATTTGCTGGCTGACATACAAGTGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CCA 72 bp | CCACTATGTTCTTCGCCCTCTGAGGTGGCTTCCTGTTaGTTGAAGATGGTTCCTTCTTCAAAAAGGCAAATG | + |
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Preference number: 6 (lower is better) Translates to: PLCSSPSEVASC*LKMVPSSKRQM Trigger: CATTTGCCTTTTTGAAGAAGGAACCATCTTCAACCAACAGGAAGCCACCTCAGAGGGCGAAGAACATAGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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| CDS CAA 72 bp | CTATGTTCTTCGCCCTCTGAGGTGGCTTCCTGTTGGTaGAAGATGGTTCCTTCTTCAAAAAGGCAAATGTGG | + |
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Preference number: 6 (lower is better) Translates to: LCSSPSEVASCW*KMVPSSKRQMW Trigger: CCACATTTGCCTTTTTGAAGAAGGAACCATCTTCAACCAACAGGAAGCCACCTCAGAGGGCGAAGAACATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039949.5 |
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