RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EMC8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031819

Ensembl transcript IDs: ENSMUST00000034277.14, ENSMUST00000180417.8, ENSMUST00000181111.8, ENSMUST00000181334.2, ENSMUST00000181836.2, ENSMUST00000181950.2

Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCTGGAGGACAGCGGAGGGCATGGAAGAGGGACATCAGTACGACTaGTCTGGCCTCCCTTCCCTGACGTGGGACCTATCAGGCTGGCTG +
Preference number: 1 (lower is better)
Translates to: LWRTAEGMEEGHQYD*SGLPSLTWDLSGWL
Trigger: CAGCCAGCCTGATAGGTCCCACGTCAGGGAAGGGAGGCCAGATCAGTCGTACTGATGTCCCTCTTCCATGCCCTCCGCTGTCCTCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CCA 90 bp TGTGGGTCTCTGCACCGCCACCTGTTCTCGTGCTGCTCGTACACGTaGATCGTGGGCGCTGCGCAGTCCATCGTGAACTTGGCATTGTCC +
Preference number: 1 (lower is better)
Translates to: CGSLHRHLFSCCSYT*IVGAAQSIVNLALS
Trigger: GGACAATGCCAAGTTCACGATGGACTGCGCAGCGCCCACGATCCACGTGTACGAGCAGCACGAGAACAGGTGGCGGTGCAGAGACCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR GCA 90 bp CCGCCACCTGTTCTCGTGCTGCTCGTACACGTGGATCGTGGGCGCTaGGCAGTCCATCGTGAACTTGGCATTGTCCACCATGATGAGTGC +
Preference number: 1 (lower is better)
Translates to: PPPVLVLLVHVDRGR*AVHRELGIVHHDEC
Trigger: GCACTCATCATGGTGGACAATGCCAAGTTCACGATGGACTGCGCAGCGCCCACGATCCACGTGTACGAGCAGCACGAGAACAGGTGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CCA 90 bp CTGCGATCCTGGAGGCCACCTTTTCTGCCACCTGGTTTGGGTGTGTaGGTACTTTCCAGCTGTCCCCTGGCTTCTAGCTGGCTGCAGCCA +
Preference number: 1 (lower is better)
Translates to: LRSWRPPFLPPGLGV*VLSSCPLASSWLQP
Trigger: TGGCTGCAGCCAGCTAGAAGCCAGGGGACAGCTGGAAAGTACCCACACACCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CCA 90 bp GAAGCCCTCTGCGATCCTGGAGGCCACCTTTTCTGCCACCTGGTTTaGGTGTGTGGGTACTTTCCAGCTGTCCCCTGGCTTCTAGCTGGC +
Preference number: 1 (lower is better)
Translates to: EALCDPGGHLFCHLV*VCGYFPAVPWLLAG
Trigger: GCCAGCTAGAAGCCAGGGGACAGCTGGAAAGTACCCACACACCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CCA 90 bp TTCTGCCACCTGGTTTGGGTGTGTGGGTACTTTCCAGCTGTCCCCTaGCTTCTAGCTGGCTGCAGCCAAAGGAAGCCTCTGGAGGACAGC +
Preference number: 1 (lower is better)
Translates to: FCHLVWVCGYFPAVP*LLAGCSQRKPLEDS
Trigger: GCTGTCCTCCAGAGGCTTCCTTTGGCTGCAGCCAGCTAGAAGCCAGGGGACAGCTGGAAAGTACCCACACACCCAAACCAGGTGGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR GCA 90 bp ACAGGCCATGGAGATCAGGACAGTAAGCAGCCCCTCTGTGACCTCTaGTTCAGTTCCTGCCTCCAGCCGCCTCCCCTTCCATCTGAGTTA +
Preference number: 1 (lower is better)
Translates to: TGHGDQDSKQPLCDL*FSSCLQPPPLPSEL
Trigger: TAACTCAGATGGAAGGGGAGGCGGCTGGAGGCAGGAACTGAAGCAGAGGTCACAGAGGGGCTGCTTACTGTCCTGATCTCCATGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 90 bp TGGGCCATCCTGCTGGCCGTACAGACTTTCCCAGGACTTCCAAGCTaGTTTCTAATCCACGGGCACCAGGCACACACACTTAGGCTGGTC +
Preference number: 1 (lower is better)
Translates to: WAILLAVQTFPGLPS*FLIHGHQAHTLRLV
Trigger: GACCAGCCTAAGTGTGTGTGCCTGGTGCCCGTGGATTAGAAAGCAGCTTGGAAGTCCTGGGAAAGTCTGTACGGCCAGCAGGATGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 90 bp CTTGGCATTGTCCACCATGATGAGTGCGGCATCACCGAAGCCCTCTaGGATCCTGGAGGCCACCTTTTCTGCCACCTGGTTTGGGTGTGT +
Preference number: 1 (lower is better)
Translates to: LGIVHHDECGITEAL*DPGGHLFCHLVWVC
Trigger: ACACACCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGGGCTTCGGTGATGCCGCACTCATCATGGTGGACAATGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CCA 90 bp TGCACGTGTGGAGGACCTGTGCACTCTCACATGTGGGTCTTAAGGTaGCTTCATCTGCTGGGCCATCCTGCTGGCCGTACAGACTTTCCC +
Preference number: 1 (lower is better)
Translates to: CTCGGPVHSHMWVLR*LHLLGHPAGRTDFP
Trigger: GGGAAAGTCTGTACGGCCAGCAGGATGGCCCAGCAGATGAAGCCACCTTAAGACCCACATGTGAGAGTGCACAGGTCCTCCACACGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR TCA 90 bp AGGTTTCTCAGGCAACAGTGCTGTCTAATCCCACGGTGCGGCCTGTaGAGTAGTGCAGCTCCAGCCCCACATCTGCTTGGCTGCTCAGAT +
Preference number: 1 (lower is better)
Translates to: RFLRQQCCLIPRCGL*SSAAPAPHLLGCSD
Trigger: ATCTGAGCAGCCAAGCAGATGTGGGGCTGGAGCTGCACTACTTCACAGGCCGCACCGTGGGATTAGACAGCACTGTTGCCTGAGAAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 90 bp TCGTGGCCTTGGCTTCTCTTGGGACCTCTGCTCTTGTCACCAGTGTaGTGTGCTCACTGTGCAGCGAGGTTTCTCAGGCAACAGTGCTGT +
Preference number: 1 (lower is better)
Translates to: SWPWLLLGPLLLSPV*CAHCAARFLRQQCC
Trigger: ACAGCACTGTTGCCTGAGAAACCTCGCTGCACAGTGAGCACAGCACACTGGTGACAAGAGCAGAGGTCCCAAGAGAAGCCAAGGCCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 90 bp TTGCCCAGATCCCTCCCAGGGGCAGATAACAGAGAGCCTCGGAGATaGACGCTCTCAGAAACAGCTGTGATGGACGACACAGGTCTTGCT +
Preference number: 1 (lower is better)
Translates to: LPRSLPGADNREPRR*TLSETAVMDDTGLA
Trigger: AGCAAGACCTGTGTCGTCCATCACAGCTGTTTCTGAGAGCGTCCATCTCCGAGGCTCTCTGTTATCTGCCCCTGGGAGGGATCTGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 90 bp TACCCCCACTGTGAGCATGTTCTTTGCTGTGCATGGCCCTGCCAGTaGGTGTTATTGGAGGGTTGTGGACAGAAACATGCCCTGGGCCAC +
Preference number: 1 (lower is better)
Translates to: YPHCEHVLCCAWPCQ*VLLEGCGQKHALGH
Trigger: GTGGCCCAGGGCATGTTTCTGTCCACAACCCTCCAATAACACCCACTGGCAGGGCCATGCACAGCAAAGAACATGCTCACAGTGGGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 90 bp TCTCTTGGGACCTCTGCTCTTGTCACCAGTGTGCTGTGCTCACTGTaGAGCGAGGTTTCTCAGGCAACAGTGCTGTCTAATCCCACGGTG +
Preference number: 1 (lower is better)
Translates to: SLGTSALVTSVLCSL*SEVSQATVLSNPTV
Trigger: CACCGTGGGATTAGACAGCACTGTTGCCTGAGAAACCTCGCTGCACAGTGAGCACAGCACACTGGTGACAAGAGCAGAGGTCCCAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 90 bp ACTGGCTTTGGGAATGTTCGTGGCCTTGGCTTCTCTTGGGACCTCTaGTCTTGTCACCAGTGTGCTGTGCTCACTGTGCAGCGAGGTTTC +
Preference number: 1 (lower is better)
Translates to: TGFGNVRGLGFSWDL*SCHQCAVLTVQRGF
Trigger: GAAACCTCGCTGCACAGTGAGCACAGCACACTGGTGACAAGAGCAGAGGTCCCAAGAGAAGCCAAGGCCACGAACATTCCCAAAGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 90 bp ATGGCCCTGCCAGTGGGTGTTATTGGAGGGTTGTGGACAGAAACATaGCCTGGGCCACAGAACTACAGTGTAGCAAATGGGGCTCACCCA +
Preference number: 1 (lower is better)
Translates to: MALPVGVIGGLWTET*PGPQNYSVANGAHP
Trigger: TGGGTGAGCCCCATTTGCTACACTGTAGTTCTGTGGCCCAGGGCATGTTTCTGTCCACAACCCTCCAATAACACCCACTGGCAGGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 90 bp AGTAGCGGAGTCAGGAGGAACTGGCTTTGGGAATGTTCGTGGCCTTaGCTTCTCTTGGGACCTCTGCTCTTGTCACCAGTGTGCTGTGCT +
Preference number: 1 (lower is better)
Translates to: SSGVRRNWLWECSWP*LLLGPLLLSPVCCA
Trigger: AGCACAGCACACTGGTGACAAGAGCAGAGGTCCCAAGAGAAGCCAAGGCCACGAACATTCCCAAAGCCAGTTCCTCCTGACTCCGCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 90 bp GTGGACAGAAACATGCCCTGGGCCACAGAACTACAGTGTAGCAAATaGGGCTCACCCAACCCATTCTGGACTGCTGTGGTGTGTGTGTGG +
Preference number: 1 (lower is better)
Translates to: VDRNMPWATELQCSK*GSPNPFWTAVVCVW
Trigger: CCACACACACACCACAGCAGTCCAGAATGGGTTGGGTGAGCCCCATTTGCTACACTGTAGTTCTGTGGCCCAGGGCATGTTTCTGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 90 bp GTGAGCATGTTCTTTGCTGTGCATGGCCCTGCCAGTGGGTGTTATTaGAGGGTTGTGGACAGAAACATGCCCTGGGCCACAGAACTACAG +
Preference number: 1 (lower is better)
Translates to: VSMFFAVHGPASGCY*RVVDRNMPWATELQ
Trigger: CTGTAGTTCTGTGGCCCAGGGCATGTTTCTGTCCACAACCCTCCAATAACACCCACTGGCAGGGCCATGCACAGCAAAGAACATGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 90 bp CCCATTCTGGACTGCTGTGGTGTGTGTGTGGCTGTTGGCATCAGTTaGCAGGTTTCTAAGCCATTTCCCTTAAGGGGCCTAGTTGGGGAA +
Preference number: 1 (lower is better)
Translates to: PILDCCGVCVAVGIS*QVSKPFPLRGLVGE
Trigger: TTCCCCAACTAGGCCCCTTAAGGGAAATGGCTTAGAAACCTGCCAACTGATGCCAACAGCCACACACACACCACAGCAGTCCAGAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR TCA 90 bp TGCCTGCATGTATCTCTCTGTGCACCCCATGGTGCCTGGTACCAGTaGAGGGTTCAGACAGTTGTGAGCTGTCATGTTGGAGTCAGGAAT +
Preference number: 1 (lower is better)
Translates to: CLHVSLCAPHGAWYQ*RVQTVVSCHVGVRN
Trigger: ATTCCTGACTCCAACATGACAGCTCACAACTGTCTGAACCCTTCACTGGTACCAGGCACCATGGGGTGCACAGAGAGATACATGCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR TCA 90 bp CAGATAACAGAGAGCCTCGGAGATGGACGCTCTCAGAAACAGCTGTaGTGGACGACACAGGTCTTGCTGAGGAGATCACAAGCACACACA +
Preference number: 1 (lower is better)
Translates to: QITESLGDGRSQKQL*WTTQVLLRRSQAHT
Trigger: TGTGTGTGCTTGTGATCTCCTCAGCAAGACCTGTGTCGTCCATCACAGCTGTTTCTGAGAGCGTCCATCTCCGAGGCTCTCTGTTATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 90 bp TACAGGGCAGAAAGCACACTCAGAGTCCACTCACTAAGGAGACCCTaGCTTCCCCACTTAGTAAGAACACAGGGAACGCTGTTAGCAGCT +
Preference number: 1 (lower is better)
Translates to: YRAESTLRVHSLRRP*LPHLVRTQGTLLAA
Trigger: AGCTGCTAACAGCGTTCCCTGTGTTCTTACTAAGTGGGGAAGCCAGGGTCTCCTTAGTGAGTGGACTCTGAGTGTGCTTTCTGCCCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 90 bp TCTTTGCTGTGCATGGCCCTGCCAGTGGGTGTTATTGGAGGGTTGTaGACAGAAACATGCCCTGGGCCACAGAACTACAGTGTAGCAAAT +
Preference number: 1 (lower is better)
Translates to: SLLCMALPVGVIGGL*TETCPGPQNYSVAN
Trigger: ATTTGCTACACTGTAGTTCTGTGGCCCAGGGCATGTTTCTGTCCACAACCCTCCAATAACACCCACTGGCAGGGCCATGCACAGCAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR TCA 90 bp GAGCCCACGCTGTGCATATACGCTGTGCATATACTTAAGACCAGCTaGGACAGGGACTTGCAGACTCAACAGGGAAATCTTGGACTACCC +
Preference number: 1 (lower is better)
Translates to: EPTLCIYAVHILKTS*DRDLQTQQGNLGLP
Trigger: GGGTAGTCCAAGATTTCCCTGTTGAGTCTGCAAGTCCCTGTCTCAGCTGGTCTTAAGTATATGCACAGCGTATATGCACAGCGTGGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 90 bp GTATGGGTGTTTTTGCCTGCATGTATCTCTCTGTGCACCCCATGGTaGCTGGTACCAGTGAAGGGTTCAGACAGTTGTGAGCTGTCATGT +
Preference number: 1 (lower is better)
Translates to: VWVFLPACISLCTPW*LVPVKGSDSCELSC
Trigger: ACATGACAGCTCACAACTGTCTGAACCCTTCACTGGTACCAGGCACCATGGGGTGCACAGAGAGATACATGCAGGCAAAAACACCCATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 90 bp TCAGGTTGTCTTGGGACTCAATGTAGCCCAGGCTGGCCACACTTGTaGCAATTCTACTGTCTCAGCCTGAGCGCTAGGATCATTGGTATA +
Preference number: 1 (lower is better)
Translates to: SGCLGTQCSPGWPHL*QFYCLSLSARIIGI
Trigger: TATACCAATGATCCTAGCGCTCAGGCTGAGACAGTAGAATTGCCACAAGTGTGGCCAGCCTGGGCTACATTGAGTCCCAAGACAACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR TCA 90 bp ATGGACGCTCTCAGAAACAGCTGTGATGGACGACACAGGTCTTGCTaGGGAGATCACAAGCACACACAATGCCTGAGGATGAATATATCA +
Preference number: 1 (lower is better)
Translates to: MDALRNSCDGRHRSC*GDHKHTQCLRMNIS
Trigger: TGATATATTCATCCTCAGGCATTGTGTGTGCTTGTGATCTCCTCAGCAAGACCTGTGTCGTCCATCACAGCTGTTTCTGAGAGCGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 90 bp TTTATTCTTCGTGTATGGGTGTTTTTGCCTGCATGTATCTCTCTGTaGACCCCATGGTGCCTGGTACCAGTGAAGGGTTCAGACAGTTGT +
Preference number: 1 (lower is better)
Translates to: FILRVWVFLPACISL*TPWCLVPVKGSDSC
Trigger: ACAACTGTCTGAACCCTTCACTGGTACCAGGCACCATGGGGTGCACAGAGAGATACATGCAGGCAAAAACACCCATACACGAAGAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 90 bp AAGAACACAGGGAACGCTGTTAGCAGCTTCACGAAGCCCAAGAAATaGCACGGTTCTCCCTGTAGAGCATTCACAAAGGACAATGTACAA +
Preference number: 1 (lower is better)
Translates to: KNTGNAVSSFTKPKK*HGSPCRAFTKDNVQ
Trigger: TTGTACATTGTCCTTTGTGAATGCTCTACAGGGAGAACCGTGCCATTTCTTGGGCTTCGTGAAGCTGCTAACAGCGTTCCCTGTGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 90 bp TCAAAAATAACATTTATTTATCAACCGTGCGTCACAGTGCACGTGTaGAGGACCTGTGCACTCTCACATGTGGGTCTTAAGGTGGCTTCA +
Preference number: 1 (lower is better)
Translates to: SKITFIYQPCVTVHV*RTCALSHVGLKVAS
Trigger: TGAAGCCACCTTAAGACCCACATGTGAGAGTGCACAGGTCCTCCACACGTGCACTGTGACGCACGGTTGATAAATAAATGTTATTTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 90 bp TGGCAATTCTACTGTCTCAGCCTGAGCGCTAGGATCATTGGTATATaGCACCATGCTTGGCTAGTATCCTTAAATATTTACTTATCAGCA +
Preference number: 1 (lower is better)
Translates to: WQFYCLSLSARIIGI*HHAWLVSLNIYLSA
Trigger: TGCTGATAAGTAAATATTTAAGGATACTAGCCAAGCATGGTGGCATATACCAATGATCCTAGCGCTCAGGCTGAGACAGTAGAATTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 90 bp TGTCTCAGCCTGAGCGCTAGGATCATTGGTATATGCCACCATGCTTaGCTAGTATCCTTAAATATTTACTTATCAGCAGAGTCTCTCTAT +
Preference number: 1 (lower is better)
Translates to: CLSLSARIIGICHHA*LVSLNIYLSAESLY
Trigger: ATAGAGAGACTCTGCTGATAAGTAAATATTTAAGGATACTAGCCAAGCATGGTGGCATATACCAATGATCCTAGCGCTCAGGCTGAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR GCA 90 bp AGCCCCGCCCTGAAGGATGCCGACCGCACCCCCTCCAAGGCACACTTGCAGCTTGTGGATCGTGGGCGCTaGGCAGTCCATCGTGAACTT +
Preference number: 2 (lower is better)
Translates to: SPALKDADRTPSKAHLQLVDRGR*AVHREL
Trigger: AAGTTCACGATGGACTGCGCAGCGCCCACGATCCAC...AAGCTGCAAGTGTGCCTTGGAGGGGGTGCGGTCGGCATCCTTCAGGGCGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR-3UTR TCA 90 bp TGGCACAAGCAGAAAGAGCTGACGGGCGGGATCGGGCAGTACAGGACTAAGAAATCCACAGCCCCGCCCTaGAGGATGCCGACCGCACCC +
Preference number: 2 (lower is better)
Translates to: WHKQKELTGGIGQYRTKKSTAPP*RMPTAP
Trigger: GGGTGCGGTCGGCATCCTTCAGGGCGGGGCTGTGGA...TTTCTTAGTCCTGTACTGCCCGATCCCGCCCGTCAGCTCTTTCTGCTTGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181950.2
3UTR-3UTR CCA 90 bp AGCCCCGCCCTGAAGGATGCCGACCGCACCCCCTCCAAGGCACACTTGCAGCTTGCTGCCCATGTCCTGTaGCCAAAGGATGTTGCTCCT +
Preference number: 2 (lower is better)
Translates to: SPALKDADRTPSKAHLQLAAHVL*PKDVAP
Trigger: AGGAGCAACATCCTTTGGCCACAGGACATGGGCAGC...AAGCTGCAAGTGTGCCTTGGAGGGGGTGCGGTCGGCATCCTTCAGGGCGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CAA 90 bp CGAAGCCCTCTGCGATCCTGGAGGCCACCTTTTCTGCCACCTGGTTaGGGTGTGTGGGTACTTTCCAGCTGTCCCCTGGCTTCTAGCTGG +
Preference number: 2 (lower is better)
Translates to: RSPLRSWRPPFLPPG*GVWVLSSCPLASSW
Trigger: CCAGCTAGAAGCCAGGGGACAGCTGGAAAGTACCCACACACCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGGGCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR-3UTR CCA 90 bp AGCCCCGCCCTGAAGGATGCCGACCGCACCCCCTCCAAGGCACACTTGCAGCTTCTTTGGGAATGTTCGTaGCCTTGGCTTCTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: SPALKDADRTPSKAHLQLLWECS*PWLLLG
Trigger: TCCCAAGAGAAGCCAAGGCCACGAACATTCCCAAAG...AAGCTGCAAGTGTGCCTTGGAGGGGGTGCGGTCGGCATCCTTCAGGGCGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR CCA 90 bp GTGGTGTGGGTCTCTGCACCGCCACCTGTTCTCGTGCTGCTCGTACACGTGGATTTTCCAGCTGTCCCCTaGCTTCTAGCTGGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: VVWVSAPPPVLVLLVHVDFPAVP*LLAGCS
Trigger: GCTGCAGCCAGCTAGAAGCCAGGGGACAGCTGGAAA...ATCCACGTGTACGAGCAGCACGAGAACAGGTGGCGGTGCAGAGACCCACACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CAA 90 bp TACACGTGGATCGTGGGCGCTGCGCAGTCCATCGTGAACTTGGCATaGTCCACCATGATGAGTGCGGCATCACCGAAGCCCTCTGCGATC +
Preference number: 2 (lower is better)
Translates to: YTWIVGAAQSIVNLA*STMMSAASPKPSAI
Trigger: GATCGCAGAGGGCTTCGGTGATGCCGCACTCATCATGGTGGACAATGCCAAGTTCACGATGGACTGCGCAGCGCCCACGATCCACGTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CAA 90 bp TGCTCGTACACGTGGATCGTGGGCGCTGCGCAGTCCATCGTGAACTaGGCATTGTCCACCATGATGAGTGCGGCATCACCGAAGCCCTCT +
Preference number: 2 (lower is better)
Translates to: CSYTWIVGAAQSIVN*ALSTMMSAASPKPS
Trigger: AGAGGGCTTCGGTGATGCCGCACTCATCATGGTGGACAATGCCAAGTTCACGATGGACTGCGCAGCGCCCACGATCCACGTGTACGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR-3UTR GCA 90 bp GGGATCAACGTACTTAAGAAGCAAAGGCTGAGGGACCACTGCCTGGCCAAGGCCCCACATCTGCTTGGCTaGTCAGATGCTGGCTGCCCC +
Preference number: 2 (lower is better)
Translates to: GINVLKKQRLRDHCLAKAPHLLG*SDAGCP
Trigger: GGGGCAGCCAGCATCTGAGCAGCCAAGCAGATGTGG...GGCCTTGGCCAGGCAGTGGTCCCTCAGCCTTTGCTTCTTAAGTACGTTGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR GCA 90 bp TCGTACACGTGGATCGTGGGCGCTGCGCAGTCCATCGTGAACTTGGCATTGTCCGGAGGCCACCTTTTCTaGCACCTGGTTTGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: SYTWIVGAAQSIVNLALSGGHLF*HLVWVC
Trigger: ACACACCCAAACCAGGTGGCAGAAAAGGTGGCCTCC...GGACAATGCCAAGTTCACGATGGACTGCGCAGCGCCCACGATCCACGTGTACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR-3UTR TCA 90 bp GCCTGCATGTATCTCTCTGTGCACCCCATGGTGCCTGGTACCAGTGAAGGGTTCCATAAGGAAGCCGGCTaGACAGGCCATGGAGATCAG +
Preference number: 2 (lower is better)
Translates to: ACMYLSVHPMVPGTSEGFHKEAG*TGHGDQ
Trigger: CTGATCTCCATGGCCTGTTCAGCCGGCTTCCTTATG...GAACCCTTCACTGGTACCAGGCACCATGGGGTGCACAGAGAGATACATGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR GCA 90 bp GCCTGCATGTATCTCTCTGTGCACCCCATGGTGCCTGGTACCAGTGAAGGGTTCATGCCTGCTCACCCTTaGTCACTGGCAACTCCATCC +
Preference number: 2 (lower is better)
Translates to: ACMYLSVHPMVPGTSEGFMPAHP*SLATPS
Trigger: GGATGGAGTTGCCAGTGAGCAAGGGTGAGCAGGCAT...GAACCCTTCACTGGTACCAGGCACCATGGGGTGCACAGAGAGATACATGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CAA 90 bp CTTTGGGAATGTTCGTGGCCTTGGCTTCTCTTGGGACCTCTGCTCTaGTCACCAGTGTGCTGTGCTCACTGTGCAGCGAGGTTTCTCAGG +
Preference number: 2 (lower is better)
Translates to: LWECSWPWLLLGPLL*SPVCCAHCAARFLR
Trigger: CCTGAGAAACCTCGCTGCACAGTGAGCACAGCACACTGGTGACAAGAGCAGAGGTCCCAAGAGAAGCCAAGGCCACGAACATTCCCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CAA 90 bp GTCAGGAGGAACTGGCTTTGGGAATGTTCGTGGCCTTGGCTTCTCTaGGGACCTCTGCTCTTGTCACCAGTGTGCTGTGCTCACTGTGCA +
Preference number: 2 (lower is better)
Translates to: VRRNWLWECSWPWLL*GPLLLSPVCCAHCA
Trigger: TGCACAGTGAGCACAGCACACTGGTGACAAGAGCAGAGGTCCCAAGAGAAGCCAAGGCCACGAACATTCCCAAAGCCAGTTCCTCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR CCA 90 bp CTTGAATCCCAGGCCCAGGAGGCCTGGTCTACACACCAAGTTCTAGACCAGCCAGGAGTCAGGAGGAACTaGCTTTGGGAATGTTCGTGG +
Preference number: 2 (lower is better)
Translates to: LESQAQEAWSTHQVLDQPGVRRN*LWECSW
Trigger: CCACGAACATTCCCAAAGCCAGTTCCTCCTGACTCC...TGGCTGGTCTAGAACTTGGTGTGTAGACCAGGCCTCCTGGGCCTGGGATTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR TCA 90 bp CAGGTGCAGAACTGCTTTGTTGATCTCCGGGTTTGTCCAGTCGCTCCGAATGTCCTGCGCAGTCCATCGTaGACTTGGCATTGTCCACCA +
Preference number: 2 (lower is better)
Translates to: QVQNCFVDLRVCPVAPNVLRSPS*TWHCPP
Trigger: TGGTGGACAATGCCAAGTTCACGATGGACTGCGCAG...GACATTCGGAGCGACTGGACAAACCCGGAGATCAACAAAGCAGTTCTGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR-3UTR GCA 90 bp CAGGTGCAGAACTGCTTTGTTGATCTCCGGGTTTGTCCAGTCGCTCCGAATGTCTGGCTTCTAGCTGGCTaGAGCCAAAGGAAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: QVQNCFVDLRVCPVAPNVWLLAG*SQRKPL
Trigger: CAGAGGCTTCCTTTGGCTGCAGCCAGCTAGAAGCCA...GACATTCGGAGCGACTGGACAAACCCGGAGATCAACAAAGCAGTTCTGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CAA 90 bp TGTGAGCATGTTCTTTGCTGTGCATGGCCCTGCCAGTGGGTGTTATaGGAGGGTTGTGGACAGAAACATGCCCTGGGCCACAGAACTACA +
Preference number: 2 (lower is better)
Translates to: CEHVLCCAWPCQWVL*EGCGQKHALGHRTT
Trigger: TGTAGTTCTGTGGCCCAGGGCATGTTTCTGTCCACAACCCTCCAATAACACCCACTGGCAGGGCCATGCACAGCAAAGAACATGCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR CCA 90 bp CGTCCAGATGATTATCAAAATCCACGAGTGTTTCGTAGGAGCGGCTGTCCAGGAGGACAGCGGAGGGCATaGAAGAGGGACATCAGTACG +
Preference number: 2 (lower is better)
Translates to: RPDDYQNPRVFRRSGCPGGQRRA*KRDIST
Trigger: CGTACTGATGTCCCTCTTCCATGCCCTCCGCTGTCC...TCCTGGACAGCCGCTCCTACGAAACACTCGTGGATTTTGATAATCATCTGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR-3UTR GCA 90 bp AGATGTGGAGTAGCGGAGTCAGGAGGAACTGGCTTTGGGAATGTTCGTGGCCTTTTCTCTTGGGACCTCTaGTCTTGTCACCAGTGTGCT +
Preference number: 2 (lower is better)
Translates to: RCGVAESGGTGFGNVRGLFSWDL*SCHQCA
Trigger: AGCACACTGGTGACAAGAGCAGAGGTCCCAAGAGAA...AAGGCCACGAACATTCCCAAAGCCAGTTCCTCCTGACTCCGCTACTCCACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR CCA 90 bp CTGGAACTGTGTAGACCAAGCCGAACTGAACAACATCTCCCTGCTTCTAGAGTGTCTCTGTGCACCCCATaGTGCCTGGTACCAGTGAAG +
Preference number: 2 (lower is better)
Translates to: LELCRPSRTEQHLPASRVSLCTP*CLVPVK
Trigger: CTTCACTGGTACCAGGCACCATGGGGTGCACAGAGA...CACTCTAGAAGCAGGGAGATGTTGTTCAGTTCGGCTTGGTCTACACAGTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CAA 90 bp TTAAGACCAGCTGAGACAGGGACTTGCAGACTCAACAGGGAAATCTaGGACTACCCAATGGGAGACAGCTGTTGCTGGGATAATTGGACC +
Preference number: 2 (lower is better)
Translates to: LRPAETGTCRLNREI*DYPMGDSCCWDNWT
Trigger: GGTCCAATTATCCCAGCAACAGCTGTCTCCCATTGGGTAGTCCAAGATTTCCCTGTTGAGTCTGCAAGTCCCTGTCTCAGCTGGTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR CCA 90 bp ACTGCTGTGGTGTGTGTGTGGCTGTTGGCATCAGTTGGCAGGTTTCTAAGCCATTCACTAAGGAGACCCTaGCTTCCCCACTTAGTAAGA +
Preference number: 2 (lower is better)
Translates to: TAVVCVWLLASVGRFLSHSLRRP*LPHLVR
Trigger: TCTTACTAAGTGGGGAAGCCAGGGTCTCCTTAGTGA...ATGGCTTAGAAACCTGCCAACTGATGCCAACAGCCACACACACACCACAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR GCA 90 bp GTGCCAGCAGTTGAATGTTTTATTCACTTTGCCTTTCGATACATATTGTCATGGCTCTGCTTCAGTTCCTaGCTCCAGCCGCCTCCCCTT +
Preference number: 2 (lower is better)
Translates to: VPAVECFIHFAFRYILSWLCFSS*LQPPPL
Trigger: AAGGGGAGGCGGCTGGAGGCAGGAACTGAAGCAGAG...CCATGACAATATGTATCGAAAGGCAAAGTGAATAAAACATTCAACTGCTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR GCA 90 bp GACAGTTGTGAGCTGTCATGTTGGAGTCAGGAATTTGACCTTGCAAGAGCAGCAATGGGAGACAGCTGTTaGTGGGATAATTGGACCACA +
Preference number: 2 (lower is better)
Translates to: DSCELSCWSQEFDLARAAMGDSC*WDNWTT
Trigger: TGTGGTCCAATTATCCCAGCAACAGCTGTCTCCCAT...TGCTGCTCTTGCAAGGTCAAATTCCTGACTCCAACATGACAGCTCACAACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CAA 90 bp GTGCCAGCAGTTGAATGTTTTATTCACTTTGCCTTTCGATACATATaGTCATGGCCTGGTGCCCTCAGAATGCATCTGACCGAACCAGCA +
Preference number: 2 (lower is better)
Translates to: VPAVECFIHFAFRYI*SWPGALRMHLTEPA
Trigger: TGCTGGTTCGGTCAGATGCATTCTGAGGGCACCAGGCCATGACAATATGTATCGAAAGGCAAAGTGAATAAAACATTCAACTGCTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR GCA 90 bp CCTGCATGTATCTCTCTGTGCACCCCATGGTGCCTGGTACCAGTGAAGGGTTCAAAAGCTAGGCAAGAGTaGTTTGACAAGTTAGTTTTT +
Preference number: 2 (lower is better)
Translates to: PACISLCTPWCLVPVKGSKARQE*FDKLVF
Trigger: AAAAACTAACTTGTCAAAGCACTCTTGCCTAGCTTT...TGAACCCTTCACTGGTACCAGGCACCATGGGGTGCACAGAGAGATACATGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR CCA 90 bp GTGCCAGCAGTTGAATGTTTTATTCACTTTGCCTTTCGATACATATTGTCATGGAGCCCCACATCTGCTTaGCTGCTCAGATGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: VPAVECFIHFAFRYILSWSPTSA*LLRCWL
Trigger: CAGCCAGCATCTGAGCAGCCAAGCAGATGTGGGGCT...CCATGACAATATGTATCGAAAGGCAAAGTGAATAAAACATTCAACTGCTGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR CCA 90 bp TTCTCAGTATCACCTGAATATACCCCCACTGTGAGCATGTTCTTTGCTGTGCATTGTGTGTGTGGCTGTTaGCATCAGTTGGCAGGTTTC +
Preference number: 2 (lower is better)
Translates to: FSVSPEYTPTVSMFFAVHCVCGC*HQLAGF
Trigger: GAAACCTGCCAACTGATGCCAACAGCCACACACACA...ATGCACAGCAAAGAACATGCTCACAGTGGGGGTATATTCAGGTGATACTGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR GCA 90 bp CTGGAACTGTGTAGACCAAGCCGAACTGAACAACATCTCCCTGCTTCTAGAGTGTGTGCATATACGCTGTaGATATACTTAAGACCAGCT +
Preference number: 2 (lower is better)
Translates to: LELCRPSRTEQHLPASRVCAYTL*IYLRPA
Trigger: AGCTGGTCTTAAGTATATGCACAGCGTATATGCACA...CACTCTAGAAGCAGGGAGATGTTGTTCAGTTCGGCTTGGTCTACACAGTTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR GCA 90 bp CAGCTTCCCTTCCGGCTAACCTACTATTCCTCTATAAATGTAAAAATATGCTTCGTGGCCAAAGGATGTTaGTCCTCTGGAGGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: QLPFRLTYYSSINVKICFVAKGC*SSGGGL
Trigger: AAGGCCACCTCCAGAGGAGCAACATCCTTTGGCCAC...GAAGCATATTTTTACATTTATAGAGGAATAGTAGGTTAGCCGGAAGGGAAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR-3UTR CCA 90 bp GTGCCAGCAGTTGAATGTTTTATTCACTTTGCCTTTCGATACATATTGTCATGGTTAATGGGAATGACCTaGCACAAGCAGAAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: VPAVECFIHFAFRYILSWLMGMT*HKQKEL
Trigger: CAGCTCTTTCTGCTTGTGCCAGGTCATTCCCATTAA...CCATGACAATATGTATCGAAAGGCAAAGTGAATAAAACATTCAACTGCTGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR GCA 90 bp GTGCCAGCAGTTGAATGTTTTATTCACTTTGCCTTTCGATACATATTGTCATGGATGCTAGTTAGTTTTTaGCAACTTGACACAAAGAAG +
Preference number: 2 (lower is better)
Translates to: VPAVECFIHFAFRYILSWMLVSF*QLDTKK
Trigger: CTTCTTTGTGTCAAGTTGGCAAAAACTAACTAGCAT...CCATGACAATATGTATCGAAAGGCAAAGTGAATAAAACATTCAACTGCTGGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 72 bp TGGTGTGGGTCTCTGCACCGCCACCTGTTCTCGTGCTaGTCGTACACGTGGATCGTGGGCGCTGCGCAGTCC +
Preference number: 3 (lower is better)
Translates to: WCGSLHRHLFSC*SYTWIVGAAQS
Trigger: GGACTGCGCAGCGCCCACGATCCACGTGTACGAGCAGCACGAGAACAGGTGGCGGTGCAGAGACCCACACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR GCA 72 bp TCGTGGTGTGGGTCTCTGCACCGCCACCTGTTCTCGTaGTGCTCGTACACGTGGATCGTGGGCGCTGCGCAG +
Preference number: 3 (lower is better)
Translates to: SWCGSLHRHLFS*CSYTWIVGAAQ
Trigger: CTGCGCAGCGCCCACGATCCACGTGTACGAGCAGCACGAGAACAGGTGGCGGTGCAGAGACCCACACCACGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR GCA 72 bp TGCAGCTCCAGCCCCACATCTGCTTGGCTGCTCAGATaGTGGCTGCCCCAGTATTTCAGGATGCCTGGCGCG +
Preference number: 3 (lower is better)
Translates to: CSSSPTSAWLLR*WLPQYFRMPGA
Trigger: CGCGCCAGGCATCCTGAAATACTGGGGCAGCCAGCATCTGAGCAGCCAAGCAGATGTGGGGCTGGAGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 72 bp CCCAGCTTGAGCCTGGCCACACCTTCTGCTCACCCATaGCTGCTCACCCTTGCTCACTGGCAACTCCATCCC +
Preference number: 3 (lower is better)
Translates to: PSLSLATPSAHP*LLTLAHWQLHP
Trigger: GGGATGGAGTTGCCAGTGAGCAAGGGTGAGCAGGCATGGGTGAGCAGAAGGTGTGGCCAGGCTCAAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp CTGCACCGCCACCTGTTCTCGTGCTGCTCGTACACGTaGATCGTGGGCGCTGCGCAGTCCATCGTGAACTTG +
Preference number: 3 (lower is better)
Translates to: LHRHLFSCCSYT*IVGAAQSIVNL
Trigger: CAAGTTCACGATGGACTGCGCAGCGCCCACGATCCACGTGTACGAGCAGCACGAGAACAGGTGGCGGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR GCA 72 bp GGAGATCAGGACAGTAAGCAGCCCCTCTGTGACCTCTaGTTCAGTTCCTGCCTCCAGCCGCCTCCCCTTCCA +
Preference number: 3 (lower is better)
Translates to: GDQDSKQPLCDL*FSSCLQPPPLP
Trigger: TGGAAGGGGAGGCGGCTGGAGGCAGGAACTGAAGCAGAGGTCACAGAGGGGCTGCTTACTGTCCTGATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp GCTCAGATGCTGGCTGCCCCAGTATTTCAGGATGCCTaGCGCGGGCTTAGGCTGAGAAGCCCCACACACTCA +
Preference number: 3 (lower is better)
Translates to: AQMLAAPVFQDA*RGLRLRSPTHS
Trigger: TGAGTGTGTGGGGCTTCTCAGCCTAAGCCCGCGCCAGGCATCCTGAAATACTGGGGCAGCCAGCATCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp GCTGGAGAGAGGTTACAAGGTCCGCCCGAGTATAGGTaGTTTCTCCTGGGCGAGGCCCTGGGTTCTGCTCCA +
Preference number: 3 (lower is better)
Translates to: AGERLQGPPEYR*FLLGEALGSAP
Trigger: TGGAGCAGAACCCAGGGCCTCGCCCAGGAGAAACCACCTATACTCGGGCGGACCTTGTAACCTCTCTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp GTGGGACCTATCAGGCTGGCTGCTGCCCATGTCCTGTaGCCAAAGGATGTTGCTCCTCTGGAGGTGGCCTTC +
Preference number: 3 (lower is better)
Translates to: VGPIRLAAAHVL*PKDVAPLEVAF
Trigger: GAAGGCCACCTCCAGAGGAGCAACATCCTTTGGCCACAGGACATGGGCAGCAGCCAGCCTGATAGGTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CCA 72 bp TCTGGCCTCCCTTCCCTGACGTGGGACCTATCAGGCTaGCTGCTGCCCATGTCCTGTGGCCAAAGGATGTTG +
Preference number: 3 (lower is better)
Translates to: SGLPSLTWDLSG*LLPMSCGQRML
Trigger: CAACATCCTTTGGCCACAGGACATGGGCAGCAGCCAGCCTGATAGGTCCCACGTCAGGGAAGGGAGGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR-3UTR CAA 90 bp GATGAGTGCGGCATCACCGAAGCCCTCTGCGATCCTGGAGGCCACCTTTTCTGCTGTGGCCAAAGGATGTaGCTCCTCTGGAGGTGGCCT +
Preference number: 3 (lower is better)
Translates to: DECGITEALCDPGGHLFCCGQRM*LLWRWP
Trigger: AGGCCACCTCCAGAGGAGCAACATCCTTTGGCCACA...GCAGAAAAGGTGGCCTCCAGGATCGCAGAGGGCTTCGGTGATGCCGCACTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR TCA 72 bp AGGGACATCAGTACGACTGATCTGGCCTCCCTTCCCTaGCGTGGGACCTATCAGGCTGGCTGCTGCCCATGT +
Preference number: 3 (lower is better)
Translates to: RDISTTDLASLP*RGTYQAGCCPC
Trigger: ACATGGGCAGCAGCCAGCCTGATAGGTCCCACGTCAGGGAAGGGAGGCCAGATCAGTCGTACTGATGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR GCA 72 bp GCGGCCTGTGAAGTAGTGCAGCTCCAGCCCCACATCTaGTTGGCTGCTCAGATGCTGGCTGCCCCAGTATTT +
Preference number: 3 (lower is better)
Translates to: AACEVVQLQPHI*LAAQMLAAPVF
Trigger: AAATACTGGGGCAGCCAGCATCTGAGCAGCCAAGCAGATGTGGGGCTGGAGCTGCACTACTTCACAGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 72 bp GTTGGAAAACCCCAGCTTGAGCCTGGCCACACCTTCTaGTCACCCATGCCTGCTCACCCTTGCTCACTGGCA +
Preference number: 3 (lower is better)
Translates to: VGKPQLEPGHTF*SPMPAHPCSLA
Trigger: TGCCAGTGAGCAAGGGTGAGCAGGCATGGGTGAGCAGAAGGTGTGGCCAGGCTCAAGCTGGGGTTTTCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 72 bp GTCCACCATGATGAGTGCGGCATCACCGAAGCCCTCTaGGATCCTGGAGGCCACCTTTTCTGCCACCTGGTT +
Preference number: 3 (lower is better)
Translates to: VHHDECGITEAL*DPGGHLFCHLV
Trigger: AACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGGGCTTCGGTGATGCCGCACTCATCATGGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CCA 72 bp CAGCCAAAGGAAGCCTCTGGAGGACAGCGGAGGGCATaGAAGAGGGACATCAGTACGACTGATCTGGCCTCC +
Preference number: 3 (lower is better)
Translates to: QPKEASGGQRRA*KRDISTTDLAS
Trigger: GGAGGCCAGATCAGTCGTACTGATGTCCCTCTTCCATGCCCTCCGCTGTCCTCCAGAGGCTTCCTTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CCA 72 bp CCCTCTGCGATCCTGGAGGCCACCTTTTCTGCCACCTaGTTTGGGTGTGTGGGTACTTTCCAGCTGTCCCCT +
Preference number: 3 (lower is better)
Translates to: PSAILEATFSAT*FGCVGTFQLSP
Trigger: AGGGGACAGCTGGAAAGTACCCACACACCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR-3UTR CAA 90 bp CTTGAATCCCAGGCCCAGGAGGCCTGGTCTACACACCAAGTTCTAGACCAGCCACAGCCCCACATCTGCTaGGCTGCTCAGATGCTGGCT +
Preference number: 3 (lower is better)
Translates to: LESQAQEAWSTHQVLDQPQPHIC*AAQMLA
Trigger: AGCCAGCATCTGAGCAGCCAAGCAGATGTGGGGCTG...TGGCTGGTCTAGAACTTGGTGTGTAGACCAGGCCTCCTGGGCCTGGGATTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR TCA 72 bp ACAGCGGAGGGCATGGAAGAGGGACATCAGTACGACTaGTCTGGCCTCCCTTCCCTGACGTGGGACCTATCA +
Preference number: 3 (lower is better)
Translates to: TAEGMEEGHQYD*SGLPSLTWDLS
Trigger: TGATAGGTCCCACGTCAGGGAAGGGAGGCCAGATCAGTCGTACTGATGTCCCTCTTCCATGCCCTCCGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR GCA 72 bp GTCCATCGTGAACTTGGCATTGTCCACCATGATGAGTaGGGCATCACCGAAGCCCTCTGCGATCCTGGAGGC +
Preference number: 3 (lower is better)
Translates to: VHRELGIVHHDE*GITEALCDPGG
Trigger: GCCTCCAGGATCGCAGAGGGCTTCGGTGATGCCGCACTCATCATGGTGGACAATGCCAAGTTCACGATGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR GCA 72 bp GTTCTCGTGCTGCTCGTACACGTGGATCGTGGGCGCTaGGCAGTCCATCGTGAACTTGGCATTGTCCACCAT +
Preference number: 3 (lower is better)
Translates to: VLVLLVHVDRGR*AVHRELGIVHH
Trigger: ATGGTGGACAATGCCAAGTTCACGATGGACTGCGCAGCGCCCACGATCCACGTGTACGAGCAGCACGAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CCA 72 bp CTGGTTTGGGTGTGTGGGTACTTTCCAGCTGTCCCCTaGCTTCTAGCTGGCTGCAGCCAAAGGAAGCCTCTG +
Preference number: 3 (lower is better)
Translates to: LVWVCGYFPAVP*LLAGCSQRKPL
Trigger: CAGAGGCTTCCTTTGGCTGCAGCCAGCTAGAAGCCAGGGGACAGCTGGAAAGTACCCACACACCCAAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CCA 72 bp TGGAGGCCACCTTTTCTGCCACCTGGTTTGGGTGTGTaGGTACTTTCCAGCTGTCCCCTGGCTTCTAGCTGG +
Preference number: 3 (lower is better)
Translates to: WRPPFLPPGLGV*VLSSCPLASSW
Trigger: CCAGCTAGAAGCCAGGGGACAGCTGGAAAGTACCCACACACCCAAACCAGGTGGCAGAAAAGGTGGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CCA 72 bp TGCGATCCTGGAGGCCACCTTTTCTGCCACCTGGTTTaGGTGTGTGGGTACTTTCCAGCTGTCCCCTGGCTT +
Preference number: 3 (lower is better)
Translates to: CDPGGHLFCHLV*VCGYFPAVPWL
Trigger: AAGCCAGGGGACAGCTGGAAAGTACCCACACACCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR GCA 72 bp GGGAATGTTCGTGGCCTTGGCTTCTCTTGGGACCTCTaGTCTTGTCACCAGTGTGCTGTGCTCACTGTGCAG +
Preference number: 3 (lower is better)
Translates to: GNVRGLGFSWDL*SCHQCAVLTVQ
Trigger: CTGCACAGTGAGCACAGCACACTGGTGACAAGAGCAGAGGTCCCAAGAGAAGCCAAGGCCACGAACATTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 72 bp AGGGGCCTAGTTGGGGAACCTAGGAGGGTCCAAGATTaGATCCAACTCAGAATTGCCCAGATCCCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: RGLVGEPRRVQD*IQLRIAQIPPR
Trigger: CCTGGGAGGGATCTGGGCAATTCTGAGTTGGATGCAATCTTGGACCCTCCTAGGTTCCCCAACTAGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp TCCCTCCCAGGGGCAGATAACAGAGAGCCTCGGAGATaGACGCTCTCAGAAACAGCTGTGATGGACGACACA +
Preference number: 3 (lower is better)
Translates to: SLPGADNREPRR*TLSETAVMDDT
Trigger: TGTGTCGTCCATCACAGCTGTTTCTGAGAGCGTCCATCTCCGAGGCTCTCTGTTATCTGCCCCTGGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp GCAAATGGGGCTCACCCAACCCATTCTGGACTGCTGTaGTGTGTGTGTGGCTGTTGGCATCAGTTGGCAGGT +
Preference number: 3 (lower is better)
Translates to: ANGAHPTHSGLL*CVCGCWHQLAG
Trigger: ACCTGCCAACTGATGCCAACAGCCACACACACACCACAGCAGTCCAGAATGGGTTGGGTGAGCCCCATTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR-3UTR CAA 90 bp CACAAGCAGAAAGAGCTGACGGGCGGGATCGGGCAGTACAGGACTAAGAAACCATGGCCTTGGCTTCTCTaGGGACCTCTGCTCTTGTCA +
Preference number: 3 (lower is better)
Translates to: HKQKELTGGIGQYRTKKPWPWLL*GPLLLS
Trigger: TGACAAGAGCAGAGGTCCCAAGAGAAGCCAAGGCCA...TGGTTTCTTAGTCCTGTACTGCCCGATCCCGCCCGTCAGCTCTTTCTGCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 72 bp TCTCTTGGGACCTCTGCTCTTGTCACCAGTGTGCTGTaGTCACTGTGCAGCGAGGTTTCTCAGGCAACAGTG +
Preference number: 3 (lower is better)
Translates to: SLGTSALVTSVL*SLCSEVSQATV
Trigger: CACTGTTGCCTGAGAAACCTCGCTGCACAGTGAGCACAGCACACTGGTGACAAGAGCAGAGGTCCCAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 72 bp CTGCTGGCCGTACAGACTTTCCCAGGACTTCCAAGCTaGTTTCTAATCCACGGGCACCAGGCACACACACTT +
Preference number: 3 (lower is better)
Translates to: LLAVQTFPGLPS*FLIHGHQAHTL
Trigger: AAGTGTGTGTGCCTGGTGCCCGTGGATTAGAAAGCAGCTTGGAAGTCCTGGGAAAGTCTGTACGGCCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp GTCAGGAGGAACTGGCTTTGGGAATGTTCGTGGCCTTaGCTTCTCTTGGGACCTCTGCTCTTGTCACCAGTG +
Preference number: 3 (lower is better)
Translates to: VRRNWLWECSWP*LLLGPLLLSPV
Trigger: CACTGGTGACAAGAGCAGAGGTCCCAAGAGAAGCCAAGGCCACGAACATTCCCAAAGCCAGTTCCTCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp TGCATGGCCCTGCCAGTGGGTGTTATTGGAGGGTTGTaGACAGAAACATGCCCTGGGCCACAGAACTACAGT +
Preference number: 3 (lower is better)
Translates to: CMALPVGVIGGL*TETCPGPQNYS
Trigger: ACTGTAGTTCTGTGGCCCAGGGCATGTTTCTGTCCACAACCCTCCAATAACACCCACTGGCAGGGCCATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR TCA 72 bp TTTGACCTTGCAAGAGCAGCAAGCTCTCTCAACCGCTaGGCCGGCTCTCTAGCCCCCATCATGAAAGGCAAT +
Preference number: 3 (lower is better)
Translates to: FDLARAASSLNR*AGSLAPIMKGN
Trigger: ATTGCCTTTCATGATGGGGGCTAGAGAGCCGGCTCAGCGGTTGAGAGAGCTTGCTGCTCTTGCAAGGTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR TCA 72 bp GAGAGCCTCGGAGATGGACGCTCTCAGAAACAGCTGTaGTGGACGACACAGGTCTTGCTGAGGAGATCACAA +
Preference number: 3 (lower is better)
Translates to: ESLGDGRSQKQL*WTTQVLLRRSQ
Trigger: TTGTGATCTCCTCAGCAAGACCTGTGTCGTCCATCACAGCTGTTTCTGAGAGCGTCCATCTCCGAGGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 72 bp CCACTGCACTGGAGCCCACGCTGTGCATATACGCTGTaGATATACTTAAGACCAGCTGAGACAGGGACTTGC +
Preference number: 3 (lower is better)
Translates to: PLHWSPRCAYTL*IYLRPAETGTC
Trigger: GCAAGTCCCTGTCTCAGCTGGTCTTAAGTATATGCACAGCGTATATGCACAGCGTGGGCTCCAGTGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp CTCACTGGCAACTCCATCCCTCTAACACCACTGCACTaGAGCCCACGCTGTGCATATACGCTGTGCATATAC +
Preference number: 3 (lower is better)
Translates to: LTGNSIPLTPLH*SPRCAYTLCIY
Trigger: GTATATGCACAGCGTATATGCACAGCGTGGGCTCCAGTGCAGTGGTGTTAGAGGGATGGAGTTGCCAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp AGTGAAAAGCTGCTTGAATCCCAGGCCCAGGAGGCCTaGTCTACACACCAAGTTCTAGACCAGCCAAGGCTA +
Preference number: 3 (lower is better)
Translates to: SEKLLESQAQEA*STHQVLDQPRL
Trigger: TAGCCTTGGCTGGTCTAGAACTTGGTGTGTAGACCAGGCCTCCTGGGCCTGGGATTCAAGCAGCTTTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR TCA 72 bp GTATCTCTCTGTGCACCCCATGGTGCCTGGTACCAGTaGAGGGTTCAGACAGTTGTGAGCTGTCATGTTGGA +
Preference number: 3 (lower is better)
Translates to: VSLCAPHGAWYQ*RVQTVVSCHVG
Trigger: TCCAACATGACAGCTCACAACTGTCTGAACCCTTCACTGGTACCAGGCACCATGGGGTGCACAGAGAGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 72 bp CGTGTATGGGTGTTTTTGCCTGCATGTATCTCTCTGTaGACCCCATGGTGCCTGGTACCAGTGAAGGGTTCA +
Preference number: 3 (lower is better)
Translates to: RVWVFLPACISL*TPWCLVPVKGS
Trigger: TGAACCCTTCACTGGTACCAGGCACCATGGGGTGCACAGAGAGATACATGCAGGCAAAAACACCCATACACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 72 bp CCAGTGGGTGTTATTGGAGGGTTGTGGACAGAAACATaGCCTGGGCCACAGAACTACAGTGTAGCAAATGGG +
Preference number: 3 (lower is better)
Translates to: PVGVIGGLWTET*PGPQNYSVANG
Trigger: CCCATTTGCTACACTGTAGTTCTGTGGCCCAGGGCATGTTTCTGTCCACAACCCTCCAATAACACCCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp ACTCTGAAGATGTGGAGTAGCGGAGTCAGGAGGAACTaGCTTTGGGAATGTTCGTGGCCTTGGCTTCTCTTG +
Preference number: 3 (lower is better)
Translates to: TLKMWSSGVRRN*LWECSWPWLLL
Trigger: CAAGAGAAGCCAAGGCCACGAACATTCCCAAAGCCAGTTCCTCCTGACTCCGCTACTCCACATCTTCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp GGGAACGCTGTTAGCAGCTTCACGAAGCCCAAGAAATaGCACGGTTCTCCCTGTAGAGCATTCACAAAGGAC +
Preference number: 3 (lower is better)
Translates to: GNAVSSFTKPKK*HGSPCRAFTKD
Trigger: GTCCTTTGTGAATGCTCTACAGGGAGAACCGTGCCATTTCTTGGGCTTCGTGAAGCTGCTAACAGCGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp GACTGCTGTGGTGTGTGTGTGGCTGTTGGCATCAGTTaGCAGGTTTCTAAGCCATTTCCCTTAAGGGGCCTA +
Preference number: 3 (lower is better)
Translates to: DCCGVCVAVGIS*QVSKPFPLRGL
Trigger: TAGGCCCCTTAAGGGAAATGGCTTAGAAACCTGCCAACTGATGCCAACAGCCACACACACACCACAGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp TCACCCAACCCATTCTGGACTGCTGTGGTGTGTGTGTaGCTGTTGGCATCAGTTGGCAGGTTTCTAAGCCAT +
Preference number: 3 (lower is better)
Translates to: SPNPFWTAVVCV*LLASVGRFLSH
Trigger: ATGGCTTAGAAACCTGCCAACTGATGCCAACAGCCACACACACACCACAGCAGTCCAGAATGGGTTGGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR TCA 72 bp CTCAGAAACAGCTGTGATGGACGACACAGGTCTTGCTaGGGAGATCACAAGCACACACAATGCCTGAGGATG +
Preference number: 3 (lower is better)
Translates to: LRNSCDGRHRSC*GDHKHTQCLRM
Trigger: CATCCTCAGGCATTGTGTGTGCTTGTGATCTCCTCAGCAAGACCTGTGTCGTCCATCACAGCTGTTTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 72 bp CAAGCCGAACTGAACAACATCTCCCTGCTTCTAGAGTaGCGAGATGAAAGGCAAGTATCACCAAGCCTGGCT +
Preference number: 3 (lower is better)
Translates to: QAELNNISLLLE*RDERQVSPSLA
Trigger: AGCCAGGCTTGGTGATACTTGCCTTTCATCTCGGCACTCTAGAAGCAGGGAGATGTTGTTCAGTTCGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp CTGAGACAGGGACTTGCAGACTCAACAGGGAAATCTTaGACTACCCAATGGGAGACAGCTGTTGCTGGGATA +
Preference number: 3 (lower is better)
Translates to: LRQGLADSTGKS*TTQWETAVAGI
Trigger: TATCCCAGCAACAGCTGTCTCCCATTGGGTAGTCCAAGATTTCCCTGTTGAGTCTGCAAGTCCCTGTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR TCA 72 bp ACTGAACAACATCTCCCTGCTTCTAGAGTGCCGAGATaGAAGGCAAGTATCACCAAGCCTGGCTTAGTAGCC +
Preference number: 3 (lower is better)
Translates to: TEQHLPASRVPR*KASITKPGLVA
Trigger: GGCTACTAAGCCAGGCTTGGTGATACTTGCCTTTCATCTCGGCACTCTAGAAGCAGGGAGATGTTGTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR TCA 72 bp AAGCTTTCTCAGTATCACCTGAATATACCCCCACTGTaGGCATGTTCTTTGCTGTGCATGGCCCTGCCAGTG +
Preference number: 3 (lower is better)
Translates to: KLSQYHLNIPPL*ACSLLCMALPV
Trigger: CACTGGCAGGGCCATGCACAGCAAAGAACATGCTCACAGTGGGGGTATATTCAGGTGATACTGAGAAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp CTTGCAGACTCAACAGGGAAATCTTGGACTACCCAATaGGAGACAGCTGTTGCTGGGATAATTGGACCACAG +
Preference number: 3 (lower is better)
Translates to: LADSTGKSWTTQ*ETAVAGIIGPQ
Trigger: CTGTGGTCCAATTATCCCAGCAACAGCTGTCTCCCATTGGGTAGTCCAAGATTTCCCTGTTGAGTCTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 72 bp TCTTGGATTTATTCTTCGTGTATGGGTGTTTTTGCCTaGATGTATCTCTCTGTGCACCCCATGGTGCCTGGT +
Preference number: 3 (lower is better)
Translates to: SWIYSSCMGVFA*MYLSVHPMVPG
Trigger: ACCAGGCACCATGGGGTGCACAGAGAGATACATGCAGGCAAAAACACCCATACACGAAGAATAAATCCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp CATTTTAAACACAAAGCAGCTCTCACTCTGAAGATGTaGAGTAGCGGAGTCAGGAGGAACTGGCTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: HFKHKAALTLKM*SSGVRRNWLWE
Trigger: TTCCCAAAGCCAGTTCCTCCTGACTCCGCTACTCCACATCTTCAGAGTGAGAGCTGCTTTGTGTTTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp TTAGCAAAATCAGCTTCTCCTAAGCAGCTCTCCACTTaGTTCCCGAAGAGGCTGTTGCCTGTCTTACCATAT +
Preference number: 3 (lower is better)
Translates to: LAKSASPKQLST*FPKRLLPVLPY
Trigger: ATATGGTAAGACAGGCAACAGCCTCTTCGGGAACCAAGTGGAGAGCTGCTTAGGAGAAGCTGATTTTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR TCA 72 bp CAAAGAGCCTGCATGCTATTTCCTAAGATGGTCAAATaGTCCAAGCTAACAAGGACACTGCTTGGGACATCG +
Preference number: 3 (lower is better)
Translates to: QRACMLFPKMVK*SKLTRTLLGTS
Trigger: CGATGTCCCAAGCAGTGTCCTTGTTAGCTTGGATCATTTGACCATCTTAGGAAATAGCATGCAGGCTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 72 bp AAAGTCTTGGATTTATTCTTCGTGTATGGGTGTTTTTaGCTGCATGTATCTCTCTGTGCACCCCATGGTGCC +
Preference number: 3 (lower is better)
Translates to: KVLDLFFVYGCF*LHVSLCAPHGA
Trigger: GGCACCATGGGGTGCACAGAGAGATACATGCAGGCAAAAACACCCATACACGAAGAATAAATCCAAGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp TATTCACTTTGCCTTTCGATACATATTGTCATGGCCTaGTGCCCTCAGAATGCATCTGACCGAACCAGCAAT +
Preference number: 3 (lower is better)
Translates to: YSLCLSIHIVMA*CPQNASDRTSN
Trigger: ATTGCTGGTTCGGTCAGATGCATTCTGAGGGCACCAGGCCATGACAATATGTATCGAAAGGCAAAGTGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR GCA 72 bp TACTGTCTCAGCCTGAGCGCTAGGATCATTGGTATATaGCACCATGCTTGGCTAGTATCCTTAAATATTTAC +
Preference number: 3 (lower is better)
Translates to: YCLSLSARIIGI*HHAWLVSLNIY
Trigger: GTAAATATTTAAGGATACTAGCCAAGCATGGTGGCATATACCAATGATCCTAGCGCTCAGGCTGAGACAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR TCA 72 bp AATATATCACAGGGTATAGTGTTCACTGAACATATATaGGGTCCTAGTTCAACCTCTAGCACCACAACCTCC +
Preference number: 3 (lower is better)
Translates to: NISQGIVFTEHI*GPSSTSSTTTS
Trigger: GGAGGTTGTGGTGCTAGAGGTTGAACTAGGACCTCATATATGTTCAGTGAACACTATACCCTGTGATATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CCA 72 bp ACCAGAAGCAAGTTGGGAGATAAACAAGAAAGGCTATaGCTTAATAATGACGTCTGTGATAGCTATTCTTGG +
Preference number: 3 (lower is better)
Translates to: TRSKLGDKQERL*LNNDVCDSYSW
Trigger: CCAAGAATAGCTATCACAGACGTCATTATTAAGCCATAGCCTTTCTTGTTTATCTCCCAACTTGCTTCTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR GCA 90 bp GGAATGACCTGGCACAAGCAGAAAGAGCTGACGGGCGGGATCGGGCAGTACAGGCCGTTGACGGCGCAGTaGGGGTACTTGGCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GMTWHKQKELTGGIGQYRPLTAQ*GYLAPW
Trigger: CCACGGCGCCAAGTACCCGCACTGCGCCGTCAACGG...CCTGTACTGCCCGATCCCGCCCGTCAGCTCTTTCTGCTTGTGCCAGGTCATTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181950.2
CDS-3UTR TCA 90 bp CCTCTGCGATCCTGGAGGCCACCTTTTCTGCCACCTGGTTTGGGTGTGTGGGTACCACCAGGAGCCCGTTaGCGGCGCAGTGCGGGTACT +
Preference number: 4 (lower is better)
Translates to: PLRSWRPPFLPPGLGVWVPPGAR*RRSAGT
Trigger: AGTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGG...TACCCACACACCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS-3UTR TCA 90 bp AATGACCTGGCACAAGCAGAAAGAGCTGACGGGCGGGATCGGGCAGTACAGGACCCACCAGGAGCCCGTTaGCGGCGCAGTGCGGGTACT +
Preference number: 4 (lower is better)
Translates to: NDLAQAERADGRDRAVQDPPGAR*RRSAGT
Trigger: AGTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGG...GTCCTGTACTGCCCGATCCCGCCCGTCAGCTCTTTCTGCTTGTGCCAGGTCATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181950.2
CDS-3UTR CCA 90 bp CCTCTGGAGGACAGCGGAGGGCATGGAAGAGGGACATCAGTACGACTGATCTGGGCGCCACCTCCAGCATaGGCGTCAGAGCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: PLEDSGGHGRGTSVRLIWAPPPA*ASEPAC
Trigger: GCACGCTGGCTCTGACGCCCATGCTGGAGGTGGCGC...CCAGATCAGTCGTACTGATGTCCCTCTTCCATGCCCTCCGCTGTCCTCCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS-3UTR CCA 90 bp AGCCCCGCCCTGAAGGATGCCGACCGCACCCCCTCCAAGGCACACTTGCAGCTTACAGTAGTCGTGGTGTaGGTCTCTGCACCGCCACCT +
Preference number: 4 (lower is better)
Translates to: SPALKDADRTPSKAHLQLTVVVV*VSAPPP
Trigger: AGGTGGCGGTGCAGAGACCCACACCACGACTACTGT...AAGCTGCAAGTGTGCCTTGGAGGGGGTGCGGTCGGCATCCTTCAGGGCGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR CCA 90 bp AATGGGAATGACCTGGCACAAGCAGAAAGAGCTGACGGGCGGGATCGGGCAGTAGCGCCACCTCCAGCATaGGCGTCAGAGCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: NGNDLAQAERADGRDRAVAPPPA*ASEPAC
Trigger: GCACGCTGGCTCTGACGCCCATGCTGGAGGTGGCGC...TACTGCCCGATCCCGCCCGTCAGCTCTTTCTGCTTGTGCCAGGTCATTCCCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181950.2
CDS-3UTR CCA 90 bp GGAATGACCTGGCACAAGCAGAAAGAGCTGACGGGCGGGATCGGGCAGTACAGGCGTACACGTGGATCGTaGGCGCTGCGCAGTCCATCG +
Preference number: 4 (lower is better)
Translates to: GMTWHKQKELTGGIGQYRRTRGS*ALRSPS
Trigger: CGATGGACTGCGCAGCGCCCACGATCCACGTGTACG...CCTGTACTGCCCGATCCCGCCCGTCAGCTCTTTCTGCTTGTGCCAGGTCATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR CCA 90 bp TCGTACACGTGGATCGTGGGCGCTGCGCAGTCCATCGTGAACTTGGCATTGTCCCGCAGTGCGGGTACTTaGCGCCGTGGAGCACCATCT +
Preference number: 4 (lower is better)
Translates to: SYTWIVGAAQSIVNLALSRSAGT*RRGAPS
Trigger: AGATGGTGCTCCACGGCGCCAAGTACCCGCACTGCG...GGACAATGCCAAGTTCACGATGGACTGCGCAGCGCCCACGATCCACGTGTACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS-3UTR CCA 90 bp TGGCCTCCCTTCCCTGACGTGGGACCTATCAGGCTGGCTGCTGCCCATGTCCTGGGTCACCTGCACACCTaGCATCCTTCACACGCTCAT +
Preference number: 4 (lower is better)
Translates to: WPPFPDVGPIRLAAAHVLGHLHT*HPSHAH
Trigger: ATGAGCGTGTGAAGGATGCCAGGTGTGCAGGTGACC...CAGGACATGGGCAGCAGCCAGCCTGATAGGTCCCACGTCAGGGAAGGGAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS-3UTR CCA 90 bp AGATGTGGAGTAGCGGAGTCAGGAGGAACTGGCTTTGGGAATGTTCGTGGCCTTGCGCCACCTCCAGCATaGGCGTCAGAGCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: RCGVAESGGTGFGNVRGLAPPPA*ASEPAC
Trigger: GCACGCTGGCTCTGACGCCCATGCTGGAGGTGGCGC...AAGGCCACGAACATTCCCAAAGCCAGTTCCTCCTGACTCCGCTACTCCACATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CAA 72 bp ATCGTGGGCGCTGCGCAGTCCATCGTGAACTTGGCATaGTCCACCATGATGAGTGCGGCATCACCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: IVGAAQSIVNLA*STMMSAASPKP
Trigger: GGGCTTCGGTGATGCCGCACTCATCATGGTGGACAATGCCAAGTTCACGATGGACTGCGCAGCGCCCACGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CAA 72 bp ACGTGGATCGTGGGCGCTGCGCAGTCCATCGTGAACTaGGCATTGTCCACCATGATGAGTGCGGCATCACCG +
Preference number: 4 (lower is better)
Translates to: TWIVGAAQSIVN*ALSTMMSAASP
Trigger: CGGTGATGCCGCACTCATCATGGTGGACAATGCCAAGTTCACGATGGACTGCGCAGCGCCCACGATCCACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS-3UTR GCA 90 bp ACTGCTGTGGTGTGTGTGTGGCTGTTGGCATCAGTTGGCAGGTTTCTAAGCCATCCGTTGACGGCGCAGTaGGGGTACTTGGCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: TAVVCVWLLASVGRFLSHPLTAQ*GYLAPW
Trigger: CCACGGCGCCAAGTACCCGCACTGCGCCGTCAACGG...ATGGCTTAGAAACCTGCCAACTGATGCCAACAGCCACACACACACCACAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR GCA 90 bp CCTCTGCGATCCTGGAGGCCACCTTTTCTGCCACCTGGTTTGGGTGTGTGGGTACGTGGAAGAGCGGGATaGAGTCCACGAAGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: PLRSWRPPFLPPGLGVWVRGRAG*SPRRAC
Trigger: ACACGCTCTTCGTGGACTGCATCCCGCTCTTCCACG...TACCCACACACCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS-3UTR GCA 90 bp CTTGAATCCCAGGCCCAGGAGGCCTGGTCTACACACCAAGTTCTAGACCAGCCACGTGGTGTGGGTCTCTaGACCGCCACCTGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LESQAQEAWSTHQVLDQPRGVGL*TATCSR
Trigger: ACGAGAACAGGTGGCGGTGCAGAGACCCACACCACG...TGGCTGGTCTAGAACTTGGTGTGTAGACCAGGCCTCCTGGGCCTGGGATTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR CCA 90 bp TCACCGAAGCCCTCTGCGATCCTGGAGGCCACCTTTTCTGCCACCTGGTTTGGGCCACAGCCTCTAGTTTaGAGTGGGAAGCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SPKPSAILEATFSATWFGPQPLV*SGKQQA
Trigger: AGCCTGCTGCTTCCCACTCCAAACTAGAGGCTGTGG...CCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGGGCTTCGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS-3UTR GCA 90 bp TGGCACAAGCAGAAAGAGCTGACGGGCGGGATCGGGCAGTACAGGACTAAGAAAGGAGGCCACCTTTTCTaGCACCTGGTTTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WHKQKELTGGIGQYRTKKGGHLF*HLVWAG
Trigger: GCCAGCCCAAACCAGGTGGCAGAAAAGGTGGCCTCC...TTTCTTAGTCCTGTACTGCCCGATCCCGCCCGTCAGCTCTTTCTGCTTGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR CCA 90 bp CAAAATCCACGAGTGTTTCGTAGGAGCGGCTGTCCAGGAGTGAAGCTGAGATCCCGCAGTGCGGGTACTTaGCGCCGTGGAGCACCATCT +
Preference number: 4 (lower is better)
Translates to: QNPRVFRRSGCPGVKLRSRSAGT*RRGAPS
Trigger: AGATGGTGCTCCACGGCGCCAAGTACCCGCACTGCG...GGATCTCAGCTTCACTCCTGGACAGCCGCTCCTACGAAACACTCGTGGATTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000180417.8
ENSMUST00000181950.2
CDS-3UTR CCA 90 bp CAGAGTCCACTCACTAAGGAGACCCTGGCTTCCCCACTTAGTAAGAACACAGGGTGCTGCTCGTACACGTaGATCGTGGGCGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: QSPLTKETLASPLSKNTGCCSYT*IVGAAQ
Trigger: CTGCGCAGCGCCCACGATCCACGTGTACGAGCAGCA...CCCTGTGTTCTTACTAAGTGGGGAAGCCAGGGTCTCCTTAGTGAGTGGACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR CCA 90 bp TGCAGCCAAAGGAAGCCTCTGGAGGACAGCGGAGGGCATGGAAGAGGGACATCAGAAGCAGCAGGCTGGTaGACACAGGCAGACTTGGTT +
Preference number: 4 (lower is better)
Translates to: CSQRKPLEDSGGHGRGTSEAAGW*TQADLV
Trigger: AACCAAGTCTGCCTGTGTCCACCAGCCTGCTGCTTC...TGATGTCCCTCTTCCATGCCCTCCGCTGTCCTCCAGAGGCTTCCTTTGGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CAA 72 bp TGTTCGTGGCCTTGGCTTCTCTTGGGACCTCTGCTCTaGTCACCAGTGTGCTGTGCTCACTGTGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: CSWPWLLLGPLL*SPVCCAHCAAR
Trigger: CCTCGCTGCACAGTGAGCACAGCACACTGGTGACAAGAGCAGAGGTCCCAAGAGAAGCCAAGGCCACGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CAA 72 bp TGGCCACACCTTCTGCTCACCCATGCCTGCTCACCCTaGCTCACTGGCAACTCCATCCCTCTAACACCACTG +
Preference number: 4 (lower is better)
Translates to: WPHLLLTHACSP*LTGNSIPLTPL
Trigger: CAGTGGTGTTAGAGGGATGGAGTTGCCAGTGAGCAAGGGTGAGCAGGCATGGGTGAGCAGAAGGTGTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR GCA 90 bp TGGCACAAGCAGAAAGAGCTGACGGGCGGGATCGGGCAGTACAGGACTAAGAAACGTGGAAGAGCGGGATaGAGTCCACGAAGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: WHKQKELTGGIGQYRTKKRGRAG*SPRRAC
Trigger: ACACGCTCTTCGTGGACTGCATCCCGCTCTTCCACG...TTTCTTAGTCCTGTACTGCCCGATCCCGCCCGTCAGCTCTTTCTGCTTGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181950.2
CDS-3UTR GCA 90 bp CCTGCATGTATCTCTCTGTGCACCCCATGGTGCCTGGTACCAGTGAAGGGTTCAGTGGATCGTGGGCGCTaGGCAGTCCATCGTGAACTT +
Preference number: 4 (lower is better)
Translates to: PACISLCTPWCLVPVKGSVDRGR*AVHREL
Trigger: AAGTTCACGATGGACTGCGCAGCGCCCACGATCCAC...TGAACCCTTCACTGGTACCAGGCACCATGGGGTGCACAGAGAGATACATGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR GCA 90 bp CCTGCATGTATCTCTCTGTGCACCCCATGGTGCCTGGTACCAGTGAAGGGTTCACGCCACCTGTTCTCGTaGTGCTCGTACACGTGGATC +
Preference number: 4 (lower is better)
Translates to: PACISLCTPWCLVPVKGSRHLFS*CSYTWI
Trigger: GATCCACGTGTACGAGCAGCACGAGAACAGGTGGCG...TGAACCCTTCACTGGTACCAGGCACCATGGGGTGCACAGAGAGATACATGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CAA 72 bp CTGTGCATGGCCCTGCCAGTGGGTGTTATTGGAGGGTaGTGGACAGAAACATGCCCTGGGCCACAGAACTAC +
Preference number: 4 (lower is better)
Translates to: LCMALPVGVIGG*WTETCPGPQNY
Trigger: GTAGTTCTGTGGCCCAGGGCATGTTTCTGTCCACAACCCTCCAATAACACCCACTGGCAGGGCCATGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR TCA 90 bp TGTGGTCCTTGTCTAGCACAGGTGCAGAACTGCTTTGTTGATCTCCGGGTTTGTACAGTAGTCGCAGGGTaGGCGCCACCTCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: CGPCLAQVQNCFVDLRVCTVVAG*APPPAW
Trigger: CCATGCTGGAGGTGGCGCTCACCCTGCGACTACTGT...ACAAACCCGGAGATCAACAAAGCAGTTCTGCACCTGTGCTAGACAAGGACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000181950.2
CDS-3UTR GCA 90 bp GTCGCTCCGAATGTCGTCCAGATGATTATCAAAATCCACGAGTGTTTCGTAGGACCGTTGACGGCGCAGTaGGGGTACTTGGCGCCGTGG +
Preference number: 4 (lower is better)
Translates to: VAPNVVQMIIKIHECFVGPLTAQ*GYLAPW
Trigger: CCACGGCGCCAAGTACCCGCACTGCGCCGTCAACGG...TCCTACGAAACACTCGTGGATTTTGATAATCATCTGGACGACATTCGGAGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000180417.8
ENSMUST00000181950.2
CDS-3UTR GCA 90 bp CCTGCATGTATCTCTCTGTGCACCCCATGGTGCCTGGTACCAGTGAAGGGTTCACACCTGTTCTCGTGCTaGTCGTACACGTGGATCGTG +
Preference number: 4 (lower is better)
Translates to: PACISLCTPWCLVPVKGSHLFSC*SYTWIV
Trigger: CACGATCCACGTGTACGAGCAGCACGAGAACAGGTG...TGAACCCTTCACTGGTACCAGGCACCATGGGGTGCACAGAGAGATACATGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR CCA 90 bp TGTGGTCCTTGTCTAGCACAGGTGCAGAACTGCTTTGTTGATCTCCGGGTTTGTAGAGCCAGCGTGCCGTaGAAGAGCGGGATGCAGTCC +
Preference number: 4 (lower is better)
Translates to: CGPCLAQVQNCFVDLRVCRASVP*KSGMQS
Trigger: GGACTGCATCCCGCTCTTCCACGGCACGCTGGCTCT...ACAAACCCGGAGATCAACAAAGCAGTTCTGCACCTGTGCTAGACAAGGACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000180417.8
ENSMUST00000181950.2
CDS-3UTR CCA 90 bp CACAAGCAGAAAGAGCTGACGGGCGGGATCGGGCAGTACAGGACTAAGAAACCATTCTGCCACCTGGTTTaGGCTGGCATCCTTCACACG +
Preference number: 4 (lower is better)
Translates to: HKQKELTGGIGQYRTKKPFCHLV*AGILHT
Trigger: CGTGTGAAGGATGCCAGCCCAAACCAGGTGGCAGAA...TGGTTTCTTAGTCCTGTACTGCCCGATCCCGCCCGTCAGCTCTTTCTGCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CAA 72 bp TGTCTTGGGACTCAATGTAGCCCAGGCTGGCCACACTaGTGGCAATTCTACTGTCTCAGCCTGAGCGCTAGG +
Preference number: 4 (lower is better)
Translates to: CLGTQCSPGWPH*WQFYCLSLSAR
Trigger: CCTAGCGCTCAGGCTGAGACAGTAGAATTGCCACAAGTGTGGCCAGCCTGGGCTACATTGAGTCCCAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CAA 72 bp AGTCAGGAGGAACTGGCTTTGGGAATGTTCGTGGCCTaGGCTTCTCTTGGGACCTCTGCTCTTGTCACCAGT +
Preference number: 4 (lower is better)
Translates to: SQEELALGMFVA*ASLGTSALVTS
Trigger: ACTGGTGACAAGAGCAGAGGTCCCAAGAGAAGCCAAGGCCACGAACATTCCCAAAGCCAGTTCCTCCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR CCA 90 bp TGTGGTCCTTGTCTAGCACAGGTGCAGAACTGCTTTGTTGATCTCCGGGTTTGTGCCTCTAGTTTGGAGTaGGAAGCAGCAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: CGPCLAQVQNCFVDLRVCASSLE*EAAGWW
Trigger: CCACCAGCCTGCTGCTTCCCACTCCAAACTAGAGGC...ACAAACCCGGAGATCAACAAAGCAGTTCTGCACCTGTGCTAGACAAGGACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS-3UTR CCA 90 bp TATCAAAATCCACGAGTGTTTCGTAGGAGCGGCTGTCCAGGAGTGAAGCTGAGATCAGCTCTTCCTCGCTaGCCCTGGAGGGTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: YQNPRVFRRSGCPGVKLRSALPR*PWRVKS
Trigger: ACTCTTGACCCTCCAGGGCCAGCGAGGAAGAGCTGA...TCTCAGCTTCACTCCTGGACAGCCGCTCCTACGAAACACTCGTGGATTTTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CAA 72 bp GCTGAGACAGGGACTTGCAGACTCAACAGGGAAATCTaGGACTACCCAATGGGAGACAGCTGTTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: AETGTCRLNREI*DYPMGDSCCWD
Trigger: ATCCCAGCAACAGCTGTCTCCCATTGGGTAGTCCAAGATTTCCCTGTTGAGTCTGCAAGTCCCTGTCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
3UTR CAA 72 bp GTTGTGAGCTGTCATGTTGGAGTCAGGAATTTGACCTaGCAAGAGCAGCAAGCTCTCTCAACCGCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: VVSCHVGVRNLT*QEQQALSTAEP
Trigger: CGGCTCAGCGGTTGAGAGAGCTTGCTGCTCTTGCAAGGTCAAATTCCTGACTCCAACATGACAGCTCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR TCA 90 bp GGGATAATTGGACCACAGCCTGTGACTAATAAATGCTGTCATCCCCTTCTCCCCCTGCGCAGTCCATCGTaGACTTGGCATTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: GIIGPQPVTNKCCHPLLPLRSPS*TWHCPP
Trigger: TGGTGGACAATGCCAAGTTCACGATGGACTGCGCAG...GGGGAGAAGGGGATGACAGCATTTATTAGTCACAGGCTGTGGTCCAATTATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR GCA 90 bp CAGGTGCAGAACTGCTTTGTTGATCTCCGGGTTTGTCCAGTCGCTCCGAATGTCTTTGAGCTCTCTCCTTaGACAACAGAGGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: QVQNCFVDLRVCPVAPNVFELSP*TTEEPW
Trigger: CCATGGCTCCTCTGTTGTGCAAGGAGAGAGCTCAAA...GACATTCGGAGCGACTGGACAAACCCGGAGATCAACAAAGCAGTTCTGCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CAA 72 bp AACCCATTCTGGACTGCTGTGGTGTGTGTGTGGCTGTaGGCATCAGTTGGCAGGTTTCTAAGCCATTTCCCT +
Preference number: 4 (lower is better)
Translates to: NPFWTAVVCVWL*ASVGRFLSHFP
Trigger: AGGGAAATGGCTTAGAAACCTGCCAACTGATGCCAACAGCCACACACACACCACAGCAGTCCAGAATGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR TCA 90 bp GGCCGTACAGACTTTCCCAGGACTTCCAAGCTGCTTTCTAATCCACGGGCACCACGAATGTCGTCCAGATaGTTATCAAAATCCACGAGT +
Preference number: 4 (lower is better)
Translates to: GRTDFPRTSKLLSNPRAPRMSSR*LSKSTS
Trigger: ACTCGTGGATTTTGATAATCATCTGGACGACATTCG...TGGTGCCCGTGGATTAGAAAGCAGCTTGGAAGTCCTGGGAAAGTCTGTACGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR CCA 90 bp CCGAATGTCGTCCAGATGATTATCAAAATCCACGAGTGTTTCGTAGGAGCGGCTACAGGCAGACTTGGTTaGTGGCTGCTCCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PNVVQMIIKIHECFVGAATGRLG*WLLLLF
Trigger: AAAGAGGAGGAGCAGCCACCAACCAAGTCTGCCTGT...AGCCGCTCCTACGAAACACTCGTGGATTTTGATAATCATCTGGACGACATTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS-3UTR TCA 90 bp CTAACCTACTATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTCCACCAGGAGCCCGTTaGCGGCGCAGTGCGGGTACT +
Preference number: 4 (lower is better)
Translates to: LTYYSSINVKICFRLRCSPPGAR*RRSAGT
Trigger: AGTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGG...ACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATAGTAGGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181950.2
CDS-3UTR CCA 90 bp CAGCTTCCCTTCCGGCTAACCTACTATTCCTCTATAAATGTAAAAATATGCTTCAGAGCCAGCGTGCCGTaGAAGAGCGGGATGCAGTCC +
Preference number: 4 (lower is better)
Translates to: QLPFRLTYYSSINVKICFRASVP*KSGMQS
Trigger: GGACTGCATCCCGCTCTTCCACGGCACGCTGGCTCT...GAAGCATATTTTTACATTTATAGAGGAATAGTAGGTTAGCCGGAAGGGAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181950.2
CDS-3UTR CCA 90 bp TATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTGTGGTCCTTCGTACACGTGGATCGTaGGCGCTGCGCAGTCCATCG +
Preference number: 4 (lower is better)
Translates to: YSSINVKICFRLRCSVVLRTRGS*ALRSPS
Trigger: CGATGGACTGCGCAGCGCCCACGATCCACGTGTACG...AAGGACCACACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034277.14
ENSMUST00000181111.8
CDS-3UTR CCA 90 bp CTAACCTACTATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTCGCAGTGCGGGTACTTaGCGCCGTGGAGCACCATCT +
Preference number: 4 (lower is better)
Translates to: LTYYSSINVKICFRLRCSRSAGT*RRGAPS
Trigger: AGATGGTGCTCCACGGCGCCAAGTACCCGCACTGCG...ACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATAGTAGGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181950.2
CDS-3UTR CCA 90 bp TCCCTTCCGGCTAACCTACTATTCCTCTATAAATGTAAAAATATGCTTCCGTCTAGCCCTCTGCGATCCTaGAGGCCACCTTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SLPANLLFLYKCKNMLPSSPLRS*RPPFLP
Trigger: TGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGGGCT...AGACGGAAGCATATTTTTACATTTATAGAGGAATAGTAGGTTAGCCGGAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR CCA 90 bp CTAACCTACTATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTTGCTGCTCGTACACGTaGATCGTGGGCGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: LTYYSSINVKICFRLRCSCCSYT*IVGAAQ
Trigger: CTGCGCAGCGCCCACGATCCACGTGTACGAGCAGCA...ACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATAGTAGGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034277.14
ENSMUST00000181111.8
CDS-3UTR CCA 90 bp CTTCCGGCTAACCTACTATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGTGGGAAGCAGCAGGCTaGTGGACACAGGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: LPANLLFLYKCKNMLPSSWEAAG*WTQADL
Trigger: CAAGTCTGCCTGTGTCCACCAGCCTGCTGCTTCCCA...CGAAGACGGAAGCATATTTTTACATTTATAGAGGAATAGTAGGTTAGCCGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS-3UTR GCA 90 bp CTAACCTACTATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTGGAGGCCACCTTTTCTaGCACCTGGTTTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LTYYSSINVKICFRLRCSGGHLF*HLVWAG
Trigger: GCCAGCCCAAACCAGGTGGCAGAAAAGGTGGCCTCC...ACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATAGTAGGTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034277.14
ENSMUST00000181111.8
CDS-3UTR GCA 90 bp ACCTACTATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTGTGGTGGATCGTGGGCGCTaGGCAGTCCATCGTGAACTT +
Preference number: 4 (lower is better)
Translates to: TYYSSINVKICFRLRCSVVDRGR*AVHREL
Trigger: AAGTTCACGATGGACTGCGCAGCGCCCACGATCCAC...CACACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATAGTAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034277.14
ENSMUST00000181111.8
CDS-3UTR CCA 90 bp TACTATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTGTGGTCAGCCCTCTGCGATCCTaGAGGCCACCTTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: YYSSINVKICFRLRCSVVSPLRS*RPPFLP
Trigger: TGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGGGCT...GACCACACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034277.14
ENSMUST00000181111.8
CDS-3UTR TCA 90 bp TATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTGTGGTCCTTCTGCGCAGTCCATCGTaGACTTGGCATTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: YSSINVKICFRLRCSVVLLRSPS*TWHCPP
Trigger: TGGTGGACAATGCCAAGTTCACGATGGACTGCGCAG...AAGGACCACACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034277.14
ENSMUST00000181111.8
CDS-3UTR GCA 90 bp TACTATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTGTGGTCTGGAAAAACCCTGGCTaGTCATCTGGCCGGTCACCT +
Preference number: 4 (lower is better)
Translates to: YYSSINVKICFRLRCSVVWKNPG*SSGRSP
Trigger: AGGTGACCGGCCAGATGAGCAGCCAGGGTTTTTCCA...GACCACACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS-3UTR CCA 90 bp TATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTGTGGTCCTTTTCTGCCACCTGGTTTaGGCTGGCATCCTTCACACG +
Preference number: 4 (lower is better)
Translates to: YSSINVKICFRLRCSVVLFCHLV*AGILHT
Trigger: CGTGTGAAGGATGCCAGCCCAAACCAGGTGGCAGAA...AAGGACCACACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034277.14
ENSMUST00000181111.8
CDS-3UTR GCA 90 bp CTAACCTACTATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTTCGCTGTTCTCGTGCTaGTCGTACACGTGGATCGTG +
Preference number: 4 (lower is better)
Translates to: LTYYSSINVKICFRLRCSSLFSC*SYTWIV
Trigger: CACGATCCACGTGTACGAGCAGCACGAGAACAGCGA...ACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATAGTAGGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000181111.8
CDS-3UTR CCA 90 bp CAGCTTCCCTTCCGGCTAACCTACTATTCCTCTATAAATGTAAAAATATGCTTCACAACAGAGGAGCCATaGAAAAACCCTGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QLPFRLTYYSSINVKICFTTEEP*KNPGCS
Trigger: TGAGCAGCCAGGGTTTTTCCATGGCTCCTCTGTTGT...GAAGCATATTTTTACATTTATAGAGGAATAGTAGGTTAGCCGGAAGGGAAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
3UTR CAA 72 bp GTTGAATGTTTTATTCACTTTGCCTTTCGATACATATaGTCATGGCCTGGTGCCCTCAGAATGCATCTGACC +
Preference number: 4 (lower is better)
Translates to: VECFIHFAFRYI*SWPGALRMHLT
Trigger: GGTCAGATGCATTCTGAGGGCACCAGGCCATGACAATATGTATCGAAAGGCAAAGTGAATAAAACATTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR CCA 90 bp CTAACCTACTATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTACCTTTTCTGCCACCTaGTTTGGGCTGGCATCCTTC +
Preference number: 4 (lower is better)
Translates to: LTYYSSINVKICFRLRCSTFSAT*FGLASF
Trigger: GAAGGATGCCAGCCCAAACCAGGTGGCAGAAAAGGT...ACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATAGTAGGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034277.14
ENSMUST00000181111.8
3UTR CAA 72 bp ATTTTAAAGCTGGCTAGACAGTCTCTCTCTTCATTATaGCTTTATGGTGGGACCTTCAAAATCCTGACCTTC +
Preference number: 4 (lower is better)
Translates to: ILKLARQSLSSL*LYGGTFKILTF
Trigger: GAAGGTCAGGATTTTGAAGGTCCCACCATAAAGCAATAATGAAGAGAGAGACTGTCTAGCCAGCTTTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR TCA 90 bp CTAACCTACTATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTCGAATGTCGTCCAGATaGTTATCAAAATCCACGAGT +
Preference number: 4 (lower is better)
Translates to: LTYYSSINVKICFRLRCSRMSSR*LSKSTS
Trigger: ACTCGTGGATTTTGATAATCATCTGGACGACATTCG...ACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATAGTAGGTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034277.14
ENSMUST00000181111.8
CDS GCA 90 bp AGCGTGTGGCTGCCCGCTCCGGGAGGATGCTCCTTGCGCGGCCTCTaGCTCTCGGCCACCAGGAGCCCGTTGACGGCGCAGTGCGGGTAC +
Preference number: 5 (lower is better)
Translates to: SVWLPAPGGCSLRGL*LSATRSPLTAQCGY
Trigger: GTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGCCGAGAGGCAGAGGCCGCGCAAGGAGCATCCTCCCGGAGCGGGCAGCCACACGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS GCA 90 bp GGGATGCAGTCCACGAAGAGCGTGTGGCTGCCCGCTCCGGGAGGATaGTCCTTGCGCGGCCTCTGCCTCTCGGCCACCAGGAGCCCGTTG +
Preference number: 5 (lower is better)
Translates to: GMQSTKSVWLPAPGG*SLRGLCLSATRSPL
Trigger: CAACGGGCTCCTGGTGGCCGAGAGGCAGAGGCCGCGCAAGGAGCATCCTCCCGGAGCGGGCAGCCACACGCTCTTCGTGGACTGCATCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS GCA 90 bp GCGTGCCGTGGAAGAGCGGGATGCAGTCCACGAAGAGCGTGTGGCTaGCCGCTCCGGGAGGATGCTCCTTGCGCGGCCTCTGCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: ACRGRAGCSPRRACG*PLREDAPCAASASR
Trigger: CCGAGAGGCAGAGGCCGCGCAAGGAGCATCCTCCCGGAGCGGGCAGCCACACGCTCTTCGTGGACTGCATCCCGCTCTTCCACGGCACGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS CCA 90 bp GCCAGCGTGCCGTGGAAGAGCGGGATGCAGTCCACGAAGAGCGTGTaGCTGCCCGCTCCGGGAGGATGCTCCTTGCGCGGCCTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: ASVPWKSGMQSTKSV*LPAPGGCSLRGLCL
Trigger: GAGGCAGAGGCCGCGCAAGGAGCATCCTCCCGGAGCGGGCAGCCACACGCTCTTCGTGGACTGCATCCCGCTCTTCCACGGCACGCTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS TCA 90 bp GATGCTCCTTGCGCGGCCTCTGCCTCTCGGCCACCAGGAGCCCGTTaGCGGCGCAGTGCGGGTACTTGGCGCCGTGGAGCACCATCTTGC +
Preference number: 5 (lower is better)
Translates to: DAPCAASASRPPGAR*RRSAGTWRRGAPSC
Trigger: GCAAGATGGTGCTCCACGGCGCCAAGTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGCCGAGAGGCAGAGGCCGCGCAAGGAGCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS GCA 90 bp CCTCCAGCATGGGCGTCAGAGCCAGCGTGCCGTGGAAGAGCGGGATaGAGTCCACGAAGAGCGTGTGGCTGCCCGCTCCGGGAGGATGCT +
Preference number: 5 (lower is better)
Translates to: PPAWASEPACRGRAG*SPRRACGCPLREDA
Trigger: AGCATCCTCCCGGAGCGGGCAGCCACACGCTCTTCGTGGACTGCATCCCGCTCTTCCACGGCACGCTGGCTCTGACGCCCATGCTGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS CCA 90 bp AGGGTGAGCGCCACCTCCAGCATGGGCGTCAGAGCCAGCGTGCCGTaGAAGAGCGGGATGCAGTCCACGAAGAGCGTGTGGCTGCCCGCT +
Preference number: 5 (lower is better)
Translates to: RVSATSSMGVRASVP*KSGMQSTKSVWLPA
Trigger: AGCGGGCAGCCACACGCTCTTCGTGGACTGCATCCCGCTCTTCCACGGCACGCTGGCTCTGACGCCCATGCTGGAGGTGGCGCTCACCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS-3UTR CAA 90 bp AAAGGAAGCCTCTGGAGGACAGCGGAGGGCATGGAAGAGGGACATCAGTACGACGCCACCAGGAGCCCGTaGACGGCGCAGTGCGGGTAC +
Preference number: 5 (lower is better)
Translates to: KGSLWRTAEGMEEGHQYDATRSP*TAQCGY
Trigger: GTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGC...GTCGTACTGATGTCCCTCTTCCATGCCCTCCGCTGTCCTCCAGAGGCTTCCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS TCA 90 bp CCACCTGGTTTGGGCTGTTGTCTTTGCACCACGAGTCAATCAGGGTaGGCGCCACCTCCAGCATGGGCGTCAGAGCCAGCGTGCCGTGGA +
Preference number: 5 (lower is better)
Translates to: PPGLGCCLCTTSQSG*APPPAWASEPACRG
Trigger: TCCACGGCACGCTGGCTCTGACGCCCATGCTGGAGGTGGCGCTCACCCTGATTGACTCGTGGTGCAAAGACAACAGCCCAAACCAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000181836.2
CDS GCA 90 bp CTTGGCATTGTCCACCATGATGAGTGCGGCATCACCGAAGCCCTCTaGGATCCTGGAGGCCACCTTTTCTGCCACCTGGTTTGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: LGIVHHDECGITEAL*DPGGHLFCHLVWAG
Trigger: GCCAGCCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGGGCTTCGGTGATGCCGCACTCATCATGGTGGACAATGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034277.14
ENSMUST00000181111.8
CDS GCA 90 bp GAGCTCTCTCCTTGCACAACAGAGGAGCCATGGAAAAACCCTGGCTaGTCATCTGGCCGGTCACCTGCACACCTGGCATCCTTCACACGC +
Preference number: 5 (lower is better)
Translates to: ELSPCTTEEPWKNPG*SSGRSPAHLASFTR
Trigger: GCGTGTGAAGGATGCCAGGTGTGCAGGTGACCGGCCAGATGAGCAGCCAGGGTTTTTCCATGGCTCCTCTGTTGTGCAAGGAGAGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS CCA 90 bp GAAGCCCTCTGCGATCCTGGAGGCCACCTTTTCTGCCACCTGGTTTaGGCTGTTGTCTTTGCACCACGAGTCAATCAGGGTGAGCGCCAC +
Preference number: 5 (lower is better)
Translates to: EALCDPGGHLFCHLV*AVVFAPRVNQGERH
Trigger: GTGGCGCTCACCCTGATTGACTCGTGGTGCAAAGACAACAGCCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000181836.2
CDS GCA 90 bp TGCGGCATCACCGAAGCCCTCTGCGATCCTGGAGGCCACCTTTTCTaGCACCTGGTTTGGGCTGTTGTCTTTGCACCACGAGTCAATCAG +
Preference number: 5 (lower is better)
Translates to: CGITEALCDPGGHLF*HLVWAVVFAPRVNQ
Trigger: CTGATTGACTCGTGGTGCAAAGACAACAGCCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGGGCTTCGGTGATGCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000181836.2
CDS GCA 90 bp CTTGGCATTGTCCACCATGATGAGTGCGGCATCACCGAAGCCCTCTaGGATCCTGGAGGCCACCTTTTCTGCCACCTGGTTTGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: LGIVHHDECGITEAL*DPGGHLFCHLVWAV
Trigger: AACAGCCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGGGCTTCGGTGATGCCGCACTCATCATGGTGGACAATGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000181836.2
CDS GCA 90 bp GTAGTCGCTGTTCTCGTGCTGCTCGTACACGTGGATCGTGGGCGCTaGGCAGTCCATCGTGAACTTGGCATTGTCCACCATGATGAGTGC +
Preference number: 5 (lower is better)
Translates to: VVAVLVLLVHVDRGR*AVHRELGIVHHDEC
Trigger: GCACTCATCATGGTGGACAATGCCAAGTTCACGATGGACTGCGCAGCGCCCACGATCCACGTGTACGAGCAGCACGAGAACAGCGACTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000181111.8
CDS GCA 90 bp CAGCTCTTCCTCGCTGGCCCTGGAGGGTCAAGAGTTAAGTTACCCTaGCTTCCACAGCCTCTAGTTTGGAGTGGGAAGCAGCAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: QLFLAGPGGSRVKLP*LPQPLVWSGKQQAG
Trigger: ACCAGCCTGCTGCTTCCCACTCCAAACTAGAGGCTGTGGAAGGCAGGGTAACTTAACTCTTGACCCTCCAGGGCCAGCGAGGAAGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS CCA 90 bp TCACCGAAGCCCTCTGCGATCCTGGAGGCCACCTTTTCTGCCACCTaGTTTGGGCTGTTGTCTTTGCACCACGAGTCAATCAGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: SPKPSAILEATFSAT*FGLLSLHHESIRVS
Trigger: GCTCACCCTGATTGACTCGTGGTGCAAAGACAACAGCCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGGGCTTCGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000181836.2
CDS-3UTR CAA 90 bp GTCCAGATGATTATCAAAATCCACGAGTGTTTCGTAGGAGCGGCTGTCCAGGAGGCGCAGTGCGGGTACTaGGCGCCGTGGAGCACCATC +
Preference number: 5 (lower is better)
Translates to: VQMIIKIHECFVGAAVQEAQCGY*APWSTI
Trigger: GATGGTGCTCCACGGCGCCAAGTACCCGCACTGCGC...CTCCTGGACAGCCGCTCCTACGAAACACTCGTGGATTTTGATAATCATCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000180417.8
ENSMUST00000181950.2
CDS CCA 90 bp GCTCCTCCTCTTTTTGAGCTCTCTCCTTGCACAACAGAGGAGCCATaGAAAAACCCTGGCTGCTCATCTGGCCGGTCACCTGCACACCTG +
Preference number: 5 (lower is better)
Translates to: APPLFELSPCTTEEP*KNPGCSSGRSPAHL
Trigger: CAGGTGTGCAGGTGACCGGCCAGATGAGCAGCCAGGGTTTTTCCATGGCTCCTCTGTTGTGCAAGGAGAGAGCTCAAAAAGAGGAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS GCA 90 bp AGAGGAGCCATGGAAAAACCCTGGCTGCTCATCTGGCCGGTCACCTaGACACCTGGCATCCTTCACACGCTCATTAGCTTGGTAATAGCC +
Preference number: 5 (lower is better)
Translates to: RGAMEKPWLLIWPVT*TPGILHTLISLVIA
Trigger: GGCTATTACCAAGCTAATGAGCGTGTGAAGGATGCCAGGTGTGCAGGTGACCGGCCAGATGAGCAGCCAGGGTTTTTCCATGGCTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS-3UTR CAA 90 bp GAGACAGCTGTTGCTGGGATAATTGGACCACAGCCTGTGACTAATAAATGCTGTGCGCAGTGCGGGTACTaGGCGCCGTGGAGCACCATC +
Preference number: 5 (lower is better)
Translates to: ETAVAGIIGPQPVTNKCCAQCGY*APWSTI
Trigger: GATGGTGCTCCACGGCGCCAAGTACCCGCACTGCGC...ACAGCATTTATTAGTCACAGGCTGTGGTCCAATTATCCCAGCAACAGCTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR CAA 90 bp GTCGCTCCGAATGTCGTCCAGATGATTATCAAAATCCACGAGTGTTTCGTAGGAGCGCAGTGCGGGTACTaGGCGCCGTGGAGCACCATC +
Preference number: 5 (lower is better)
Translates to: VAPNVVQMIIKIHECFVGAQCGY*APWSTI
Trigger: GATGGTGCTCCACGGCGCCAAGTACCCGCACTGCGC...TCCTACGAAACACTCGTGGATTTTGATAATCATCTGGACGACATTCGGAGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000180417.8
ENSMUST00000181950.2
CDS-3UTR CAA 90 bp CCTCTGCGATCCTGGAGGCCACCTTTTCTGCCACCTGGTTTGGGTGTGTGGGTACACACGCTCATTAGCTaGGTAATAGCCAGCGATCAC +
Preference number: 5 (lower is better)
Translates to: PLRSWRPPFLPPGLGVWVHTLIS*VIASDH
Trigger: GTGATCGCTGGCTATTACCAAGCTAATGAGCGTGTG...TACCCACACACCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS TCA 90 bp TGGTGGACACAGGCAGACTTGGTTGGTGGCTGCTCCTCCTCTTTTTaGGCTCTCTCCTTGCACAACAGAGGAGCCATGGAAAAACCCTGG +
Preference number: 5 (lower is better)
Translates to: WWTQADLVGGCSSSF*ALSLHNRGAMEKPW
Trigger: CCAGGGTTTTTCCATGGCTCCTCTGTTGTGCAAGGAGAGAGCTCAAAAAGAGGAGGAGCAGCCACCAACCAAGTCTGCCTGTGTCCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS GCA 90 bp CAGACTTGGTTGGTGGCTGCTCCTCCTCTTTTTGAGCTCTCTCCTTaGACAACAGAGGAGCCATGGAAAAACCCTGGCTGCTCATCTGGC +
Preference number: 5 (lower is better)
Translates to: QTWLVAAPPLFELSP*TTEEPWKNPGCSSG
Trigger: GCCAGATGAGCAGCCAGGGTTTTTCCATGGCTCCTCTGTTGTGCAAGGAGAGAGCTCAAAAAGAGGAGGAGCAGCCACCAACCAAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS-3UTR CAA 90 bp TATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTGTGGTCCTTGCCACCAGGAGCCCGTaGACGGCGCAGTGCGGGTAC +
Preference number: 5 (lower is better)
Translates to: YSSINVKICFRLRCSVVLATRSP*TAQCGY
Trigger: GTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGC...AAGGACCACACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181950.2
CDS-3UTR CAA 90 bp ACTGCTGTGGTGTGTGTGTGGCTGTTGGCATCAGTTGGCAGGTTTCTAAGCCATTGCAGAACTGCTTTGTaGATCTCCGGGTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: TAVVCVWLLASVGRFLSHCRTAL*ISGFVQ
Trigger: CTGGACAAACCCGGAGATCAACAAAGCAGTTCTGCA...ATGGCTTAGAAACCTGCCAACTGATGCCAACAGCCACACACACACCACAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034277.14
CDS-3UTR CAA 90 bp TACTATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTGTGGTCCACACGCTCATTAGCTaGGTAATAGCCAGCGATCAC +
Preference number: 5 (lower is better)
Translates to: YYSSINVKICFRLRCSVVHTLIS*VIASDH
Trigger: GTGATCGCTGGCTATTACCAAGCTAATGAGCGTGTG...GACCACACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181111.8
CDS-3UTR CAA 90 bp ACCTACTATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTGTGCACACGCTCATTAGCTaGGTAATAGCCAGCGATCAC +
Preference number: 5 (lower is better)
Translates to: TYYSSINVKICFRLRCSVHTLIS*VIASDH
Trigger: GTGATCGCTGGCTATTACCAAGCTAATGAGCGTGTG...CACACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATAGTAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181111.8
CDS-3UTR CAA 90 bp TATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTGTGGTCCTTCTGCTCCTCCTCTTTTaGAGCTCTCTCCTTGCACAA +
Preference number: 5 (lower is better)
Translates to: YSSINVKICFRLRCSVVLLLLLF*SSLLAQ
Trigger: TTGTGCAAGGAGAGAGCTCAAAAAGAGGAGGAGCAG...AAGGACCACACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS-3UTR CAA 90 bp CTAACCTACTATTCCTCTATAAATGTAAAAATATGCTTCCGTCTTCGCTGTAGTTGCAGAACTGCTTTGTaGATCTCCGGGTTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: LTYYSSINVKICFRLRCSCRTAL*ISGFVQ
Trigger: CTGGACAAACCCGGAGATCAACAAAGCAGTTCTGCA...ACTACAGCGAAGACGGAAGCATATTTTTACATTTATAGAGGAATAGTAGGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034277.14
ENSMUST00000181111.8
CDS GCA 72 bp CTGCCCGCTCCGGGAGGATGCTCCTTGCGCGGCCTCTaGCTCTCGGCCACCAGGAGCCCGTTGACGGCGCAG +
Preference number: 6 (lower is better)
Translates to: LPAPGGCSLRGL*LSATRSPLTAQ
Trigger: CTGCGCCGTCAACGGGCTCCTGGTGGCCGAGAGGCAGAGGCCGCGCAAGGAGCATCCTCCCGGAGCGGGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS TCA 72 bp TGCGCGGCCTCTGCCTCTCGGCCACCAGGAGCCCGTTaGCGGCGCAGTGCGGGTACTTGGCGCCGTGGAGCA +
Preference number: 6 (lower is better)
Translates to: CAASASRPPGAR*RRSAGTWRRGA
Trigger: TGCTCCACGGCGCCAAGTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGCCGAGAGGCAGAGGCCGCGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS GCA 72 bp AGAGCGTGTGGCTGCCCGCTCCGGGAGGATGCTCCTTaGGCGGCCTCTGCCTCTCGGCCACCAGGAGCCCGT +
Preference number: 6 (lower is better)
Translates to: RACGCPLREDAP*AASASRPPGAR
Trigger: ACGGGCTCCTGGTGGCCGAGAGGCAGAGGCCGCGCAAGGAGCATCCTCCCGGAGCGGGCAGCCACACGCTCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS CAA 72 bp TTGCGCGGCCTCTGCCTCTCGGCCACCAGGAGCCCGTaGACGGCGCAGTGCGGGTACTTGGCGCCGTGGAGC +
Preference number: 6 (lower is better)
Translates to: LRGLCLSATRSP*TAQCGYLAPWS
Trigger: GCTCCACGGCGCCAAGTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGCCGAGAGGCAGAGGCCGCGCAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS CAA 72 bp AAGAGCGTGTGGCTGCCCGCTCCGGGAGGATGCTCCTaGCGCGGCCTCTGCCTCTCGGCCACCAGGAGCCCG +
Preference number: 6 (lower is better)
Translates to: KSVWLPAPGGCS*RGLCLSATRSP
Trigger: CGGGCTCCTGGTGGCCGAGAGGCAGAGGCCGCGCAAGGAGCATCCTCCCGGAGCGGGCAGCCACACGCTCTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS CAA 90 bp CAGTCCACGAAGAGCGTGTGGCTGCCCGCTCCGGGAGGATGCTCCTaGCGCGGCCTCTGCCTCTCGGCCACCAGGAGCCCGTTGACGGCG +
Preference number: 6 (lower is better)
Translates to: QSTKSVWLPAPGGCS*RGLCLSATRSPLTA
Trigger: CGCCGTCAACGGGCTCCTGGTGGCCGAGAGGCAGAGGCCGCGCAAGGAGCATCCTCCCGGAGCGGGCAGCCACACGCTCTTCGTGGACTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS GCA 72 bp TCCACGAAGAGCGTGTGGCTGCCCGCTCCGGGAGGATaGTCCTTGCGCGGCCTCTGCCTCTCGGCCACCAGG +
Preference number: 6 (lower is better)
Translates to: STKSVWLPAPGG*SLRGLCLSATR
Trigger: CCTGGTGGCCGAGAGGCAGAGGCCGCGCAAGGAGCATCCTCCCGGAGCGGGCAGCCACACGCTCTTCGTGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS CAA 90 bp GGATGCTCCTTGCGCGGCCTCTGCCTCTCGGCCACCAGGAGCCCGTaGACGGCGCAGTGCGGGTACTTGGCGCCGTGGAGCACCATCTTG +
Preference number: 6 (lower is better)
Translates to: GCSLRGLCLSATRSP*TAQCGYLAPWSTIL
Trigger: CAAGATGGTGCTCCACGGCGCCAAGTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGCCGAGAGGCAGAGGCCGCGCAAGGAGCATCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS CCA 72 bp CCGTGGAAGAGCGGGATGCAGTCCACGAAGAGCGTGTaGCTGCCCGCTCCGGGAGGATGCTCCTTGCGCGGC +
Preference number: 6 (lower is better)
Translates to: PWKSGMQSTKSV*LPAPGGCSLRG
Trigger: GCCGCGCAAGGAGCATCCTCCCGGAGCGGGCAGCCACACGCTCTTCGTGGACTGCATCCCGCTCTTCCACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS GCA 72 bp TGCCTCTCGGCCACCAGGAGCCCGTTGACGGCGCAGTaGGGGTACTTGGCGCCGTGGAGCACCATCTTGCAG +
Preference number: 6 (lower is better)
Translates to: CLSATRSPLTAQ*GYLAPWSTILQ
Trigger: CTGCAAGATGGTGCTCCACGGCGCCAAGTACCCGCACTGCGCCGTCAACGGGCTCCTGGTGGCCGAGAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS CCA 72 bp GCCACCTCCAGCATGGGCGTCAGAGCCAGCGTGCCGTaGAAGAGCGGGATGCAGTCCACGAAGAGCGTGTGG +
Preference number: 6 (lower is better)
Translates to: ATSSMGVRASVP*KSGMQSTKSVW
Trigger: CCACACGCTCTTCGTGGACTGCATCCCGCTCTTCCACGGCACGCTGGCTCTGACGCCCATGCTGGAGGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
ENSMUST00000181950.2
CDS TCA 72 bp TTGGGCTGTTGTCTTTGCACCACGAGTCAATCAGGGTaGGCGCCACCTCCAGCATGGGCGTCAGAGCCAGCG +
Preference number: 6 (lower is better)
Translates to: LGCCLCTTSQSG*APPPAWASEPA
Trigger: CGCTGGCTCTGACGCCCATGCTGGAGGTGGCGCTCACCCTGATTGACTCGTGGTGCAAAGACAACAGCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000181836.2
CDS GCA 72 bp ACCGAAGCCCTCTGCGATCCTGGAGGCCACCTTTTCTaGCACCTGGTTTGGGCTGGCATCCTTCACACGCTC +
Preference number: 6 (lower is better)
Translates to: TEALCDPGGHLF*HLVWAGILHTL
Trigger: GAGCGTGTGAAGGATGCCAGCCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGGGCTTCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034277.14
ENSMUST00000181111.8
CDS TCA 72 bp CATAGCTGTTGTCTTTGCACCACGAGTCAATCAGGGTaGGCGCCACCTCCAGCATGGGCGTCAGAGCCAGCG +
Preference number: 6 (lower is better)
Translates to: HSCCLCTTSQSG*APPPAWASEPA
Trigger: CGCTGGCTCTGACGCCCATGCTGGAGGTGGCGCTCACCCTGATTGACTCGTGGTGCAAAGACAACAGCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034277.14
ENSMUST00000180417.8
ENSMUST00000181334.2
CDS GCA 72 bp CCTTGCACAACAGAGGAGCCATGGAAAAACCCTGGCTaGTCATCTGGCCGGTCACCTGCACACCTGGCATCC +
Preference number: 6 (lower is better)
Translates to: PCTTEEPWKNPG*SSGRSPAHLAS
Trigger: GGATGCCAGGTGTGCAGGTGACCGGCCAGATGAGCAGCCAGGGTTTTTCCATGGCTCCTCTGTTGTGCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS CCA 72 bp CTCTCCTTGCACAACAGAGGAGCCATGGAAAAACCCTaGCTGCTCATCTGGCCGGTCACCTGCACACCTGGC +
Preference number: 6 (lower is better)
Translates to: LSLHNRGAMEKP*LLIWPVTCTPG
Trigger: GCCAGGTGTGCAGGTGACCGGCCAGATGAGCAGCCAGGGTTTTTCCATGGCTCCTCTGTTGTGCAAGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS GCA 72 bp CTCGCTGGCCCTGGAGGGTCAAGAGTTAAGTTACCCTaGCTTCCACAGCCTCTAGTTTGGAGTGGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: LAGPGGSRVKLP*LPQPLVWSGKQ
Trigger: CTGCTTCCCACTCCAAACTAGAGGCTGTGGAAGGCAGGGTAACTTAACTCTTGACCCTCCAGGGCCAGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS CCA 72 bp CCCTCTGCGATCCTGGAGGCCACCTTTTCTGCCACCTaGTTTGGGCTGTTGTCTTTGCACCACGAGTCAATC +
Preference number: 6 (lower is better)
Translates to: PSAILEATFSAT*FGLLSLHHESI
Trigger: GATTGACTCGTGGTGCAAAGACAACAGCCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000181836.2
CDS GCA 72 bp ATGGAAAAACCCTGGCTGCTCATCTGGCCGGTCACCTaGACACCTGGCATCCTTCACACGCTCATTAGCTTG +
Preference number: 6 (lower is better)
Translates to: MEKPWLLIWPVT*TPGILHTLISL
Trigger: CAAGCTAATGAGCGTGTGAAGGATGCCAGGTGTGCAGGTGACCGGCCAGATGAGCAGCCAGGGTTTTTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS CCA 72 bp TGCGATCCTGGAGGCCACCTTTTCTGCCACCTGGTTTaGGCTGTTGTCTTTGCACCACGAGTCAATCAGGGT +
Preference number: 6 (lower is better)
Translates to: CDPGGHLFCHLV*AVVFAPRVNQG
Trigger: ACCCTGATTGACTCGTGGTGCAAAGACAACAGCCCAAACCAGGTGGCAGAAAAGGTGGCCTCCAGGATCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000181836.2
CDS CAA 90 bp CTGGTGGACACAGGCAGACTTGGTTGGTGGCTGCTCCTCCTCTTTTaGAGCTCTCTCCTTGCACAACAGAGGAGCCATGGAAAAACCCTG +
Preference number: 6 (lower is better)
Translates to: LVDTGRLGWWLLLLF*SSLLAQQRSHGKTL
Trigger: CAGGGTTTTTCCATGGCTCCTCTGTTGTGCAAGGAGAGAGCTCAAAAAGAGGAGGAGCAGCCACCAACCAAGTCTGCCTGTGTCCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS GCA 72 bp TTGGTGGCTGCTCCTCCTCTTTTTGAGCTCTCTCCTTaGACAACAGAGGAGCCATGGAAAAACCCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: LVAAPPLFELSP*TTEEPWKNPGC
Trigger: GCAGCCAGGGTTTTTCCATGGCTCCTCTGTTGTGCAAGGAGAGAGCTCAAAAAGAGGAGGAGCAGCCACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS CAA 72 bp ACAGGCAGACTTGGTTGGTGGCTGCTCCTCCTCTTTTaGAGCTCTCTCCTTGCACAACAGAGGAGCCATGGA +
Preference number: 6 (lower is better)
Translates to: TGRLGWWLLLLF*SSLLAQQRSHG
Trigger: TCCATGGCTCCTCTGTTGTGCAAGGAGAGAGCTCAAAAAGAGGAGGAGCAGCCACCAACCAAGTCTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS CAA 90 bp TGGCCGGTCACCTGCACACCTGGCATCCTTCACACGCTCATTAGCTaGGTAATAGCCAGCGATCACATAGCTGTTGTCTTTGCACCACGA +
Preference number: 6 (lower is better)
Translates to: WPVTCTPGILHTLIS*VIASDHIAVVFAPR
Trigger: TCGTGGTGCAAAGACAACAGCTATGTGATCGCTGGCTATTACCAAGCTAATGAGCGTGTGAAGGATGCCAGGTGTGCAGGTGACCGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8
CDS CAA 90 bp CTGCAGCCAAAGGAAGCCTCTGGCATCCTTCACACGCTCATTAGCTaGGTAATAGCCAGCGATCACATAGCTGTTGTCTTTGCACCACGA +
Preference number: 6 (lower is better)
Translates to: LQPKEASGILHTLIS*VIASDHIAVVFAPR
Trigger: TCGTGGTGCAAAGACAACAGCTATGTGATCGCTGGCTATTACCAAGCTAATGAGCGTGTGAAGGATGCCAGAGGCTTCCTTTGGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000181334.2
CDS CAA 72 bp CTGGTTTGGGCTGGCATCCTTCACACGCTCATTAGCTaGGTAATAGCCAGCGATCACATAGCTGTTGTCTTT +
Preference number: 6 (lower is better)
Translates to: LVWAGILHTLIS*VIASDHIAVVF
Trigger: AAAGACAACAGCTATGTGATCGCTGGCTATTACCAAGCTAATGAGCGTGTGAAGGATGCCAGCCCAAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034277.14
ENSMUST00000181111.8
CDS CAA 72 bp ACCTGCACACCTGGCATCCTTCACACGCTCATTAGCTaGGTAATAGCCAGCGATCACATAGCTGTTGTCTTT +
Preference number: 6 (lower is better)
Translates to: TCTPGILHTLIS*VIASDHIAVVF
Trigger: AAAGACAACAGCTATGTGATCGCTGGCTATTACCAAGCTAATGAGCGTGTGAAGGATGCCAGGTGTGCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180417.8