Pregenerated sensors for EMC7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055943Ensembl transcript IDs: ENSMUST00000069747.6
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGCCTGAGACTATGGCCCAGCAGGTTCTAGATGTGCTCTACCATTaGTGCAGCCTCAGCCCCACCTTGCCTTGTTACTTGGTATTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: EPETMAQQVLDVLYH*CSLSPTLPCYLVLA Trigger: AGCCAATACCAAGTAACAAGGCAAGGTGGGGCTGAGGCTGCAGCAATGGTAGAGCACATCTAGAACCTGCTGGGCCATAGTCTCAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 90 bp | GCCTGGATGCAAAGCGTAGAAGAAAGGATGGTGATGAGGCTCATGTaGACTGTCACGCTCACCATGCTCCTGCCCACAGCCTGTCAATCA | + |
|
Preference number: 1 (lower is better) Translates to: AWMQSVEERMVMRLM*TVTLTMLLPTACQS Trigger: TGATTGACAGGCTGTGGGCAGGAGCATGGTGAGCGTGACAGTCCACATGAGCCTCATCACCATCCTTTCTTCTACGCTTTGCATCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 90 bp | TTCTTGCCTCACAGGACTCCACAACACTTTGCTGGCCCTAGTGTCTaGAGAGACCTACCAACTTCCTCACCAGCTCCTCACAAGAGAAGT | + |
|
Preference number: 1 (lower is better) Translates to: FLPHRTPQHFAGPSV*RDLPTSSPAPHKRS Trigger: ACTTCTCTTGTGAGGAGCTGGTGAGGAAGTTGGTAGGTCTCTGCAGACACTAGGGCCAGCAAAGTGTTGTGGAGTCCTGTGAGGCAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 90 bp | GGGCATTGGATTACCATTACAGATGATTTTGCACCACCATGTGGTTaGTGGGAACTGAACTCGGGACCTCTGCAAGAACAGTCAGGGCTC | + |
|
Preference number: 1 (lower is better) Translates to: GHWITITDDFAPPCG*WELNSGPLQEQSGL Trigger: GAGCCCTGACTGTTCTTGCAGAGGTCCCGAGTTCAGTTCCCAGCAACCACATGGTGGTGCAAAATCATCTGTAATGGTAATCCAATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 90 bp | ACAGAAGCACTACCAACTGAGCTACTTCTCCAGCTTGGGAGTAGTTaGTTCTTTCCCTCCATTTGGTTCCTACTTCACATGCCACATGCC | + |
|
Preference number: 1 (lower is better) Translates to: TEALPTELLLQLGSS*FFPSIWFLLHMPHA Trigger: GGCATGTGGCATGTGAAGTAGGAACCAAATGGAGGGAAAGAAGCAACTACTCCCAAGCTGGAGAAGTAGCTCAGTTGGTAGTGCTTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 90 bp | ACCATTGCTGCAGCCTCAGCCCCACCTTGCCTTGTTACTTGGTATTaGCTGCAACCAATAGGTTTCAAGATTCAAGCACAAGTTGGTCTG | + |
|
Preference number: 1 (lower is better) Translates to: TIAAASAPPCLVTWY*LQPIGFKIQAQVGL Trigger: CAGACCAACTTGTGCTTGAATCTTGAAACCTATTGGTTGCAGCCAATACCAAGTAACAAGGCAAGGTGGGGCTGAGGCTGCAGCAATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR TCA 90 bp | CCTGCTGACCCACATGTCCACACTTTACAACAAGTGCAACAAGTATaGGAACTGCACCAGGAACATGCCATGCTTTACAACCAGGGAATG | + |
|
Preference number: 1 (lower is better) Translates to: PADPHVHTLQQVQQV*ELHQEHAMLYNQGM Trigger: CATTCCCTGGTTGTAAAGCATGGCATGTTCCTGGTGCAGTTCTCATACTTGTTGCACTTGTTGTAAAGTGTGGACATGTGGGTCAGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 90 bp | TGCTCTACCATTGCTGCAGCCTCAGCCCCACCTTGCCTTGTTACTTaGTATTGGCTGCAACCAATAGGTTTCAAGATTCAAGCACAAGTT | + |
|
Preference number: 1 (lower is better) Translates to: CSTIAAASAPPCLVT*YWLQPIGFKIQAQV Trigger: AACTTGTGCTTGAATCTTGAAACCTATTGGTTGCAGCCAATACCAAGTAACAAGGCAAGGTGGGGCTGAGGCTGCAGCAATGGTAGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 90 bp | CATTGGATTACCATTACAGATGATTTTGCACCACCATGTGGTTGCTaGGAACTGAACTCGGGACCTCTGCAAGAACAGTCAGGGCTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: HWITITDDFAPPCGC*ELNSGPLQEQSGLL Trigger: TAAGAGCCCTGACTGTTCTTGCAGAGGTCCCGAGTTCAGTTCCCAGCAACCACATGGTGGTGCAAAATCATCTGTAATGGTAATCCAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR TCA 90 bp | TGGTCTGACCGCAGTCTCTCTGTCCTGGAGTTTGATATACATGACTaGCTTTCTCTACATCCAGTCTTAGGGATTGAATCCAGGACCTCT | + |
|
Preference number: 1 (lower is better) Translates to: WSDRSLSVLEFDIHD*LSLHPVLGIESRTS Trigger: AGAGGTCCTGGATTCAATCCCTAAGACTGGATGTAGAGAAAGTCAGTCATGTATATCAAACTCCAGGACAGAGAGACTGCGGTCAGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 90 bp | TGTGATGGGTACCTGCTGACCCACATGTCCACACTTTACAACAAGTaGAACAAGTATGAGAACTGCACCAGGAACATGCCATGCTTTACA | + |
|
Preference number: 1 (lower is better) Translates to: CDGYLLTHMSTLYNK*NKYENCTRNMPCFT Trigger: TGTAAAGCATGGCATGTTCCTGGTGCAGTTCTCATACTTGTTGCACTTGTTGTAAAGTGTGGACATGTGGGTCAGCAGGTACCCATCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 90 bp | ACTGTTCTTTGGCACAGAAAGAAAACTATCAACAGAGTCTGGGCCTaGATGCAAAGCGTAGAAGAAAGGATGGTGATGAGGCTCATGTGG | + |
|
Preference number: 1 (lower is better) Translates to: TVLWHRKKTINRVWA*MQSVEERMVMRLMW Trigger: CCACATGAGCCTCATCACCATCCTTTCTTCTACGCTTTGCATCCAGGCCCAGACTCTGTTGATAGTTTTCTTTCTGTGCCAAAGAACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 90 bp | TTTCCCACTGTTCTTTGGCACAGAAAGAAAACTATCAACAGAGTCTaGGCCTGGATGCAAAGCGTAGAAGAAAGGATGGTGATGAGGCTC | + |
|
Preference number: 1 (lower is better) Translates to: FPTVLWHRKKTINRV*AWMQSVEERMVMRL Trigger: GAGCCTCATCACCATCCTTTCTTCTACGCTTTGCATCCAGGCCCAGACTCTGTTGATAGTTTTCTTTCTGTGCCAAAGAACAGTGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 90 bp | TGTGAGTACACTGTCACTCTCTTCAGACACACCAGAAGAGGGCATTaGATTACCATTACAGATGATTTTGCACCACCATGTGGTTGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: CEYTVTLFRHTRRGH*ITITDDFAPPCGCW Trigger: CCAGCAACCACATGGTGGTGCAAAATCATCTGTAATGGTAATCCAATGCCCTCTTCTGGTGTGTCTGAAGAGAGTGACAGTGTACTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR TCA 90 bp | AACTGCCTGGTGTCAGACACTACAAGTTTGAACCAACATCAGCTATaGGTCATGTTAAGCCAGATTTCTTTCTTGCCTCACAGGACTCCA | + |
|
Preference number: 1 (lower is better) Translates to: NCLVSDTTSLNQHQL*VMLSQISFLPHRTP Trigger: TGGAGTCCTGTGAGGCAAGAAAGAAATCTGGCTTAACATGACTCATAGCTGATGTTGGTTCAAACTTGTAGTGTCTGACACCAGGCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 90 bp | TTGGTATTGGCTGCAACCAATAGGTTTCAAGATTCAAGCACAAGTTaGTCTGACCGCAGTCTCTCTGTCCTGGAGTTTGATATACATGAC | + |
|
Preference number: 1 (lower is better) Translates to: LVLAATNRFQDSSTS*SDRSLSVLEFDIHD Trigger: GTCATGTATATCAAACTCCAGGACAGAGAGACTGCGGTCAGACCAACTTGTGCTTGAATCTTGAAACCTATTGGTTGCAGCCAATACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 90 bp | TTTCTATTTGATAACCGGATTCTGTTGGGAACACAAAGGTCCTTGTaGTCACTAGGGAAGCCAGGAATGCTAAATATGCAGGGTTGTCTT | + |
|
Preference number: 1 (lower is better) Translates to: FLFDNRILLGTQRSL*SLGKPGMLNMQGCL Trigger: AAGACAACCCTGCATATTTAGCATTCCTGGCTTCCCTAGTGAGCACAAGGACCTTTGTGTTCCCAACAGAATCCGGTTATCAAATAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 90 bp | AGATACAAATATTTCCCTTTTCTAAATCTCTTTCCCACTGTTCTTTaGCACAGAAAGAAAACTATCAACAGAGTCTGGGCCTGGATGCAA | + |
|
Preference number: 1 (lower is better) Translates to: RYKYFPFLNLFPTVL*HRKKTINRVWAWMQ Trigger: TTGCATCCAGGCCCAGACTCTGTTGATAGTTTTCTTTCTGTGCCAAAGAACAGTGGGAAAGAGATTTAGAAAAGGGAAATATTTGTATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR TCA 90 bp | AAAGTAAATGCATACAGTCAAACATGCCTTTATAGACATACAACTTaGAGCAATAAAAACAGGAAAGCTTGTCAAGGTGGGAGCTATCTA | + |
|
Preference number: 1 (lower is better) Translates to: KVNAYSQTCLYRHTT*SNKNRKACQGGSYL Trigger: TAGATAGCTCCCACCTTGACAAGCTTTCCTGTTTTTATTGCTTCAAGTTGTATGTCTATAAAGGCATGTTTGACTGTATGCATTTACTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR TCA 90 bp | GTGCTATCTGTAGGACCAGGCCATATCTGGCTTCCCCTGAGCTCCCACAAGGAGTGCAGAGTCCTTTCATaGAGGAGAGAAGGGAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: VLSVGPGHIWLPLSSHKECRVLS*RREGKP Trigger: GGGCTTCCCTTCTCTCCTTCATGAAAGGACTCTGCA...CTCCTTGTGGGAGCTCAGGGGAAGCCAGATATGGCCTGGTCCTACAGATAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR TCA 90 bp | CCGGATTCTGTTGGGAACACAAAGGTCCTTGTGCTCACTAGGGAAGCCAGGAATATATCTGGCTTCCCCTaGGCTCCCACAAGGAGGACC | + |
|
Preference number: 2 (lower is better) Translates to: PDSVGNTKVLVLTREARNISGFP*APTRRT Trigger: GGTCCTCCTTGTGGGAGCTCAGGGGAAGCCAGATAT...ATTCCTGGCTTCCCTAGTGAGCACAAGGACCTTTGTGTTCCCAACAGAATCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR GCA 90 bp | CCGGATTCTGTTGGGAACACAAAGGTCCTTGTGCTCACTAGGGAAGCCAGGAATGTGCTCTACCATTGCTaGAGCCTCAGCCCCACCTTG | + |
|
Preference number: 2 (lower is better) Translates to: PDSVGNTKVLVLTREARNVLYHC*SLSPTL Trigger: CAAGGTGGGGCTGAGGCTGCAGCAATGGTAGAGCAC...ATTCCTGGCTTCCCTAGTGAGCACAAGGACCTTTGTGTTCCCAACAGAATCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR GCA 90 bp | GTGCTATCTGTAGGACCAGGCCATATCTGGCTTCCCCTGAGCTCCCACAAGGAGATTTCAGGCTTGCAGTaGATTCAGGAGGCATCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VLSVGPGHIWLPLSSHKEISGLQ*IQEASS Trigger: AGAAGATGCCTCCTGAATGCACTGCAAGCCTGAAAT...CTCCTTGTGGGAGCTCAGGGGAAGCCAGATATGGCCTGGTCCTACAGATAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR GCA 90 bp | CATGTTAAGCCAGATTTCTTTCTTGCCTCACAGGACTCCACAACACTTTGCTGGCCACTCTCTACCTCCTaGCCCCGACAGACACAACTC | + |
|
Preference number: 2 (lower is better) Translates to: HVKPDFFLASQDSTTLCWPLSTS*PRQTQL Trigger: GAGTTGTGTCTGTCGGGGGCAGGAGGTAGAGAGTGG...CCAGCAAAGTGTTGTGGAGTCCTGTGAGGCAAGAAAGAAATCTGGCTTAACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTATCTGTAGGACCAGGCCATATCTGGCTTCCCCTGAGCTCCCACAAGGAGAAAAGAGAAAGAGTTTaGAACCAACCCTATGCATGC | + |
|
Preference number: 2 (lower is better) Translates to: VLSVGPGHIWLPLSSHKEKRERV*NQPYAC Trigger: GCATGCATAGGGTTGGTTCCAAACTCTTTCTCTTTT...CTCCTTGTGGGAGCTCAGGGGAAGCCAGATATGGCCTGGTCCTACAGATAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTATCTGTAGGACCAGGCCATATCTGGCTTCCCCTGAGCTCCCACAAGGAGGAAAGCTTGTCAAGGTaGGAGCTATCTATCAGAATA | + |
|
Preference number: 2 (lower is better) Translates to: VLSVGPGHIWLPLSSHKEESLSR*ELSIRI Trigger: TATTCTGATAGATAGCTCCCACCTTGACAAGCTTTC...CTCCTTGTGGGAGCTCAGGGGAAGCCAGATATGGCCTGGTCCTACAGATAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 90 bp | GTGCTCTACCATTGCTGCAGCCTCAGCCCCACCTTGCCTTGTTACTaGGTATTGGCTGCAACCAATAGGTTTCAAGATTCAAGCACAAGT | + |
|
Preference number: 2 (lower is better) Translates to: VLYHCCSLSPTLPCY*VLAATNRFQDSSTS Trigger: ACTTGTGCTTGAATCTTGAAACCTATTGGTTGCAGCCAATACCAAGTAACAAGGCAAGGTGGGGCTGAGGCTGCAGCAATGGTAGAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 90 bp | CAGGTTCTAGATGTGCTCTACCATTGCTGCAGCCTCAGCCCCACCTaGCCTTGTTACTTGGTATTGGCTGCAACCAATAGGTTTCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: QVLDVLYHCCSLSPT*PCYLVLAATNRFQD Trigger: ATCTTGAAACCTATTGGTTGCAGCCAATACCAAGTAACAAGGCAAGGTGGGGCTGAGGCTGCAGCAATGGTAGAGCACATCTAGAACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 90 bp | CAGCTAGCAGACAGTAATTGTGAAGTGAATCCAAAAGACGGAAACTaGGACTTGTGTGATGGGTACCTGCTGACCCACATGTCCACACTT | + |
|
Preference number: 2 (lower is better) Translates to: QLADSNCEVNPKDGN*DLCDGYLLTHMSTL Trigger: AAGTGTGGACATGTGGGTCAGCAGGTACCCATCACACAAGTCCAAGTTTCCGTCTTTTGGATTCACTTCACAATTACTGTCTGCTAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CCA 90 bp | CCGGATTCTGTTGGGAACACAAAGGTCCTTGTGCTCACTAGGGAAGCCAGGAATTGGAATCCCAGAATTTaGAAGCTTGAGACAGAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: PDSVGNTKVLVLTREARNWNPRI*KLETEL Trigger: TAACTCTGTCTCAAGCTTCCAAATTCTGGGATTCCA...ATTCCTGGCTTCCCTAGTGAGCACAAGGACCTTTGTGTTCCCAACAGAATCCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 90 bp | ACCTCTCATGCTAGGCCAGCATTCCACCAACTTCTTAAAAATGTTTaGAGACAAGGTCTCCTTAAGATGTCCAGCCTAGCCTTGCCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: TSHARPAFHQLLKNV*RQGLLKMSSLALPL Trigger: TAAGGGCAAGGCTAGGCTGGACATCTTAAGGAGACCTTGTCTCAAAACATTTTTAAGAAGTTGGTGGAATGCTGGCCTAGCATGAGAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR TCA 90 bp | GATGAAGAGTTGCCTGTAGATTCAGCAAGAATGCCTTCAAAAGTAAATGCATACAGCCTAGGAAGGCCATaGAATTGTGGTCCTCCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: DEELPVDSARMPSKVNAYSLGRP*NCGPPA Trigger: GGCAGGAGGACCACAATTTCATGGCCTTCCTAGGCT...GTATGCATTTACTTTTGAAGGCATTCTTGCTGAATCTACAGGCAACTCTTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR TCA 90 bp | CCGGATTCTGTTGGGAACACAAAGGTCCTTGTGCTCACTAGGGAAGCCAGGAATTTTGATATACATGACTaGCTTTCTCTACATCCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: PDSVGNTKVLVLTREARNFDIHD*LSLHPV Trigger: GACTGGATGTAGAGAAAGTCAGTCATGTATATCAAA...ATTCCTGGCTTCCCTAGTGAGCACAAGGACCTTTGTGTTCCCAACAGAATCCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR GCA 90 bp | CATGTTAAGCCAGATTTCTTTCTTGCCTCACAGGACTCCACAACACTTTGCTGGAAATTGTGGTCCTCCTaGCTTAGCCTGCTTAGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: HVKPDFFLASQDSTTLCWKLWSS*LSLLSS Trigger: ACTACTAAGCAGGCTAAGGCAGGAGGACCACAATTT...CCAGCAAAGTGTTGTGGAGTCCTGTGAGGCAAGAAAGAAATCTGGCTTAACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR GCA 90 bp | AATAAACTGCCTGGTGTCAGACACTACAAGTTTGAACCAACATCAGCTATGAGTGCCTCAGCCCCACCTTaGCTTGTTACTTGGTATTGG | + |
|
Preference number: 2 (lower is better) Translates to: NKLPGVRHYKFEPTSAMSASAPP*LVTWYW Trigger: CCAATACCAAGTAACAAGGCAAGGTGGGGCTGAGGC...ACTCATAGCTGATGTTGGTTCAAACTTGTAGTGTCTGACACCAGGCAGTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CCA 90 bp | CATGTTAAGCCAGATTTCTTTCTTGCCTCACAGGACTCCACAACACTTTGCTGGGCAGTCTCTCTGTCCTaGAGTTTGATATACATGACT | + |
|
Preference number: 2 (lower is better) Translates to: HVKPDFFLASQDSTTLCWAVSLS*SLIYMT Trigger: AGTCATGTATATCAAACTCCAGGACAGAGAGACTGC...CCAGCAAAGTGTTGTGGAGTCCTGTGAGGCAAGAAAGAAATCTGGCTTAACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 90 bp | ACTTTTCTATTTGATAACCGGATTCTGTTGGGAACACAAAGGTCCTaGTGCTCACTAGGGAAGCCAGGAATGCTAAATATGCAGGGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: TFLFDNRILLGTQRS*CSLGKPGMLNMQGC Trigger: ACAACCCTGCATATTTAGCATTCCTGGCTTCCCTAGTGAGCACAAGGACCTTTGTGTTCCCAACAGAATCCGGTTATCAAATAGAAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR GCA 90 bp | CATATTTCATTTGAACTTACAGTGCTATTAAGTAGCATTTGGCAGTCCTTGAACCGCTCACCATGCTCCTaGCCACAGCCTGTCAATCAA | + |
|
Preference number: 2 (lower is better) Translates to: HISFELTVLLSSIWQSLNRSPCS*PQPVNQ Trigger: TTGATTGACAGGCTGTGGGCAGGAGCATGGTGAGCG...GTTCAAGGACTGCCAAATGCTACTTAATAGCACTGTAAGTTCAAATGAAATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR GCA 90 bp | ACACTTTTCTATTTGATAACCGGATTCTGTTGGGAACACAAAGGTCCTTGTGCTAACAAGTATGAGAACTaGACCAGGAACATGCCATGC | + |
|
Preference number: 2 (lower is better) Translates to: TLFYLITGFCWEHKGPCANKYEN*TRNMPC Trigger: GCATGGCATGTTCCTGGTGCAGTTCTCATACTTGTT...AGCACAAGGACCTTTGTGTTCCCAACAGAATCCGGTTATCAAATAGAAAAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR TCA 90 bp | CATATTTCATTTGAACTTACAGTGCTATTAAGTAGCATTTGGCAGTCCTTGAACAGAAGCACTACCAACTaGGCTACTTCTCCAGCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: HISFELTVLLSSIWQSLNRSTTN*ATSPAW Trigger: CCAAGCTGGAGAAGTAGCTCAGTTGGTAGTGCTTCT...GTTCAAGGACTGCCAAATGCTACTTAATAGCACTGTAAGTTCAAATGAAATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 90 bp | CAGATACAAATATTTCCCTTTTCTAAATCTCTTTCCCACTGTTCTTaGGCACAGAAAGAAAACTATCAACAGAGTCTGGGCCTGGATGCA | + |
|
Preference number: 2 (lower is better) Translates to: QIQIFPFSKSLSHCS*AQKENYQQSLGLDA Trigger: TGCATCCAGGCCCAGACTCTGTTGATAGTTTTCTTTCTGTGCCAAAGAACAGTGGGAAAGAGATTTAGAAAAGGGAAATATTTGTATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR TCA 90 bp | AATAAACTGCCTGGTGTCAGACACTACAAGTTTGAACCAACATCAGCTATGAGTACCTCATACAAAGGATaGAAGCTGGGTTTTTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: NKLPGVRHYKFEPTSAMSTSYKG*KLGFSC Trigger: ACAAGAAAAACCCAGCTTTCATCCTTTGTATGAGGT...ACTCATAGCTGATGTTGGTTCAAACTTGTAGTGTCTGACACCAGGCAGTTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR TCA 90 bp | AATAAACTGCCTGGTGTCAGACACTACAAGTTTGAACCAACATCAGCTATGAGTTCCTCAGCTTCAACCTaGTTAATTCGTGTAAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: NKLPGVRHYKFEPTSAMSSSAST*LIRVKP Trigger: AGGTTTTACACGAATTAATCAGGTTGAAGCTGAGGA...ACTCATAGCTGATGTTGGTTCAAACTTGTAGTGTCTGACACCAGGCAGTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR GCA 90 bp | CATATTTCATTTGAACTTACAGTGCTATTAAGTAGCATTTGGCAGTCCTTGAACCAGCTTGGGAGTAGTTaGTTCTTTCCCTCCATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: HISFELTVLLSSIWQSLNQLGSS*FFPSIW Trigger: CCAAATGGAGGGAAAGAAGCAACTACTCCCAAGCTG...GTTCAAGGACTGCCAAATGCTACTTAATAGCACTGTAAGTTCAAATGAAATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGACACACTTTTCTATTTGATAACCGGATTCTGTTGGGAACACAAAGGTCCCTTGTTACTTGGTATTaGCTGCAACCAATAGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: FGHTFLFDNRILLGTQRSLVTWY*LQPIGF Trigger: GAAACCTATTGGTTGCAGCCAATACCAAGTAACAAG...GGACCTTTGTGTTCCCAACAGAATCCGGTTATCAAATAGAAAAGTGTGTCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CCA 90 bp | CATATTTCATTTGAACTTACAGTGCTATTAAGTAGCATTTGGCAGTCCTTGAACAAGCAGGCTTTGGCCTaGTTAATACTTGGATGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: HISFELTVLLSSIWQSLNKQALA*LILGWE Trigger: CTCCCATCCAAGTATTAACCAGGCCAAAGCCTGCTT...GTTCAAGGACTGCCAAATGCTACTTAATAGCACTGTAAGTTCAAATGAAATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 90 bp | TTATTAGCACTTGTCTGCTTCCGTAAGCATTTATTGATGATCATGTaGCACACATTTGGAATCCCAGAATTTGGAAGCTTGAGACAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LLALVCFRKHLLMIM*HTFGIPEFGSLRQS Trigger: ACTCTGTCTCAAGCTTCCAAATTCTGGGATTCCAAATGTGTGCAACATGATCATCAATAAATGCTTACGGAAGCAGACAAGTGCTAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 90 bp | CATTTAAGGACCTTATTAGCACTTGTCTGCTTCCGTAAGCATTTATaGATGATCATGTTGCACACATTTGGAATCCCAGAATTTGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: HLRTLLALVCFRKHL*MIMLHTFGIPEFGS Trigger: GCTTCCAAATTCTGGGATTCCAAATGTGTGCAACATGATCATCAATAAATGCTTACGGAAGCAGACAAGTGCTAATAAGGTCCTTAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR TCA 90 bp | TTTGGACACACTTTTCTATTTGATAACCGGATTCTGTTGGGAACACAAAGGTCCACAGTAATTGTGAAGTaGATCCAAAAGACGGAAACT | + |
|
Preference number: 2 (lower is better) Translates to: FGHTFLFDNRILLGTQRSTVIVK*IQKTET Trigger: AGTTTCCGTCTTTTGGATTCACTTCACAATTACTGT...GGACCTTTGTGTTCCCAACAGAATCCGGTTATCAAATAGAAAAGTGTGTCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR TCA 90 bp | ACACTTTTCTATTTGATAACCGGATTCTGTTGGGAACACAAAGGTCCTTGTGCTCAGGGTGTTCCTTTATaGTTTTGCTACAAAGACAAT | + |
|
Preference number: 2 (lower is better) Translates to: TLFYLITGFCWEHKGPCAQGVPL*FCYKDN Trigger: ATTGTCTTTGTAGCAAAATCATAAAGGAACACCCTG...AGCACAAGGACCTTTGTGTTCCCAACAGAATCCGGTTATCAAATAGAAAAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CCA 90 bp | CATATTTCATTTGAACTTACAGTGCTATTAAGTAGCATTTGGCAGTCCTTGAACGAAGTAGGCAAGGAATaGGAGGCCTACGTTTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: HISFELTVLLSSIWQSLNEVGKE*EAYVFL Trigger: AAGAAAAACGTAGGCCTCCCATTCCTTGCCTACTTC...GTTCAAGGACTGCCAAATGCTACTTAATAGCACTGTAAGTTCAAATGAAATATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR TCA 90 bp | GATGAAGAGTTGCCTGTAGATTCAGCAAGAATGCCTTCAAAAGTAAATGCATACCTCCAAACTGAAATGTaGTGTTCTCATGCTGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: DEELPVDSARMPSKVNAYLQTEM*CSHAEK Trigger: TTTTTCAGCATGAGAACATCACATTTCAGTTTGGAG...GTATGCATTTACTTTTGAAGGCATTCTTGCTGAATCTACAGGCAACTCTTCATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR GCA 90 bp | TTTGGACACACTTTTCTATTTGATAACCGGATTCTGTTGGGAACACAAAGGTCCTTATTAGCACTTGTCTaGTTCCGTAAGCATTTATTG | + |
|
Preference number: 2 (lower is better) Translates to: FGHTFLFDNRILLGTQRSLLALV*FRKHLL Trigger: CAATAAATGCTTACGGAAGCAGACAAGTGCTAATAA...GGACCTTTGTGTTCCCAACAGAATCCGGTTATCAAATAGAAAAGTGTGTCCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 72 bp | GTAACCCCTGTGCTATCTGTAGGACCAGGCCATATCTaGCTTCCCCTGAGCTCCCACAAGGAGGACCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VTPVLSVGPGHI*LPLSSHKEDLR Trigger: CCTCAGGTCCTCCTTGTGGGAGCTCAGGGGAAGCCAGATATGGCCTGGTCCTACAGATAGCACAGGGGTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 72 bp | CACAGGACTCCACAACACTTTGCTGGCCCTAGTGTCTaGAGAGACCTACCAACTTCCTCACCAGCTCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: HRTPQHFAGPSV*RDLPTSSPAPH Trigger: GTGAGGAGCTGGTGAGGAAGTTGGTAGGTCTCTGCAGACACTAGGGCCAGCAAAGTGTTGTGGAGTCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 72 bp | CAAAGCGTAGAAGAAAGGATGGTGATGAGGCTCATGTaGACTGTCACGCTCACCATGCTCCTGCCCACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QSVEERMVMRLM*TVTLTMLLPTA Trigger: GGCTGTGGGCAGGAGCATGGTGAGCGTGACAGTCCACATGAGCCTCATCACCATCCTTTCTTCTACGCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 72 bp | ACTATGGCCCAGCAGGTTCTAGATGTGCTCTACCATTaGTGCAGCCTCAGCCCCACCTTGCCTTGTTACTTG | + |
|
Preference number: 3 (lower is better) Translates to: TMAQQVLDVLYH*CSLSPTLPCYL Trigger: CAAGTAACAAGGCAAGGTGGGGCTGAGGCTGCAGCAATGGTAGAGCACATCTAGAACCTGCTGGGCCATAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 72 bp | TTCAGTTCCTCCATAAGCCACCCACTCTCTACCTCCTaGCCCCGACAGACACAACTCAACTCAGAAGTCATC | + |
|
Preference number: 3 (lower is better) Translates to: FSSSISHPLSTS*PRQTQLNSEVI Trigger: GATGACTTCTGAGTTGAGTTGTGTCTGTCGGGGGCAGGAGGTAGAGAGTGGGTGGCTTATGGAGGAACTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 72 bp | TTTCTCATCCTTAGGCCAGGAGGCCTTGTTTCTAGCTaGGCCGCTTTGCCATCTCCCTACCTACATAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FLILRPGGLVSS*AALPSPYLHSL Trigger: AAGGCTATGTAGGTAGGGAGATGGCAAAGCGGCCCAGCTAGAAACAAGGCCTCCTGGCCTAAGGATGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 72 bp | ATGTGCTCTACCATTGCTGCAGCCTCAGCCCCACCTTaGCTTGTTACTTGGTATTGGCTGCAACCAATAGGT | + |
|
Preference number: 3 (lower is better) Translates to: MCSTIAAASAPP*LVTWYWLQPIG Trigger: ACCTATTGGTTGCAGCCAATACCAAGTAACAAGGCAAGGTGGGGCTGAGGCTGCAGCAATGGTAGAGCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | CCGGATTCTGTTGGGAACACAAAGGTCCTTGTGCTCACTAGGGAAGCCAGGAATACCTTGCCTTGTTACTaGGTATTGGCTGCAACCAAT | + |
|
Preference number: 3 (lower is better) Translates to: PDSVGNTKVLVLTREARNTLPCY*VLAATN Trigger: ATTGGTTGCAGCCAATACCAAGTAACAAGGCAAGGT...ATTCCTGGCTTCCCTAGTGAGCACAAGGACCTTTGTGTTCCCAACAGAATCCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | CATGTTAAGCCAGATTTCTTTCTTGCCTCACAGGACTCCACAACACTTTGCTGGAGCCTCAGCCCCACCTaGCCTTGTTACTTGGTATTG | + |
|
Preference number: 3 (lower is better) Translates to: HVKPDFFLASQDSTTLCWSLSPT*PCYLVL Trigger: CAATACCAAGTAACAAGGCAAGGTGGGGCTGAGGCT...CCAGCAAAGTGTTGTGGAGTCCTGTGAGGCAAGAAAGAAATCTGGCTTAACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 72 bp | GTTGCTTCTTTCCCTCCATTTGGTTCCTACTTCACATaGCACATGCCAGCACACCATGTTGCAATCCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VASFPPFGSYFT*HMPAHHVAILL Trigger: GAGAAGGATTGCAACATGGTGTGCTGGCATGTGGCATGTGAAGTAGGAACCAAATGGAGGGAAAGAAGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 72 bp | GCAGCCTCAGCCCCACCTTGCCTTGTTACTTGGTATTaGCTGCAACCAATAGGTTTCAAGATTCAAGCACAA | + |
|
Preference number: 3 (lower is better) Translates to: AASAPPCLVTWY*LQPIGFKIQAQ Trigger: TTGTGCTTGAATCTTGAAACCTATTGGTTGCAGCCAATACCAAGTAACAAGGCAAGGTGGGGCTGAGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | CATGTTAAGCCAGATTTCTTTCTTGCCTCACAGGACTCCACAACACTTTGCTGGGAAGCTAAGCAGGCTTaGGCCTGGTTAATACTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: HVKPDFFLASQDSTTLCWEAKQA*AWLILG Trigger: TCCAAGTATTAACCAGGCCAAAGCCTGCTTAGCTTC...CCAGCAAAGTGTTGTGGAGTCCTGTGAGGCAAGAAAGAAATCTGGCTTAACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | AATAAACTGCCTGGTGTCAGACACTACAAGTTTGAACCAACATCAGCTATGAGTGGACTCCACAACACTTaGCTGGCCCTAGTGTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: NKLPGVRHYKFEPTSAMSGLHNT*LALVSA Trigger: TGCAGACACTAGGGCCAGCAAAGTGTTGTGGAGTCC...ACTCATAGCTGATGTTGGTTCAAACTTGTAGTGTCTGACACCAGGCAGTTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 72 bp | TACCTGCTGACCCACATGTCCACACTTTACAACAAGTaGAACAAGTATGAGAACTGCACCAGGAACATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: YLLTHMSTLYNK*NKYENCTRNMP Trigger: TGGCATGTTCCTGGTGCAGTTCTCATACTTGTTGCACTTGTTGTAAAGTGTGGACATGTGGGTCAGCAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 72 bp | GATAACCGGATTCTGTTGGGAACACAAAGGTCCTTGTaGTCACTAGGGAAGCCAGGAATGCTAAATATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DNRILLGTQRSL*SLGKPGMLNMQ Trigger: CTGCATATTTAGCATTCCTGGCTTCCCTAGTGAGCACAAGGACCTTTGTGTTCCCAACAGAATCCGGTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 72 bp | ATTACCATTACAGATGATTTTGCACCACCATGTGGTTaGTGGGAACTGAACTCGGGACCTCTGCAAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: ITITDDFAPPCG*WELNSGPLQEQ Trigger: CTGTTCTTGCAGAGGTCCCGAGTTCAGTTCCCAGCAACCACATGGTGGTGCAAAATCATCTGTAATGGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 72 bp | GCTGCAACCAATAGGTTTCAAGATTCAAGCACAAGTTaGTCTGACCGCAGTCTCTCTGTCCTGGAGTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: AATNRFQDSSTS*SDRSLSVLEFD Trigger: ATCAAACTCCAGGACAGAGAGACTGCGGTCAGACCAACTTGTGCTTGAATCTTGAAACCTATTGGTTGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 72 bp | ATTGCTGCAGCCTCAGCCCCACCTTGCCTTGTTACTTaGTATTGGCTGCAACCAATAGGTTTCAAGATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: IAAASAPPCLVT*YWLQPIGFKIQ Trigger: TTGAATCTTGAAACCTATTGGTTGCAGCCAATACCAAGTAACAAGGCAAGGTGGGGCTGAGGCTGCAGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 72 bp | TGGCACAGAAAGAAAACTATCAACAGAGTCTGGGCCTaGATGCAAAGCGTAGAAGAAAGGATGGTGATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: WHRKKTINRVWA*MQSVEERMVMR Trigger: CCTCATCACCATCCTTTCTTCTACGCTTTGCATCCAGGCCCAGACTCTGTTGATAGTTTTCTTTCTGTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | CCGGATTCTGTTGGGAACACAAAGGTCCTTGTGCTCACTAGGGAAGCCAGGAATAAAGCTGGGTTTTTCTaGTGTACCAAGTACAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: PDSVGNTKVLVLTREARNKAGFF*CTKYKT Trigger: TGTTTTGTACTTGGTACACAAGAAAAACCCAGCTTT...ATTCCTGGCTTCCCTAGTGAGCACAAGGACCTTTGTGTTCCCAACAGAATCCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | ACACTTTTCTATTTGATAACCGGATTCTGTTGGGAACACAAAGGTCCTTGTGCTGACGGAAACTTGGACTaGTGTGATGGGTACCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TLFYLITGFCWEHKGPCADGNLD*CDGYLL Trigger: CAGCAGGTACCCATCACACAAGTCCAAGTTTCCGTC...AGCACAAGGACCTTTGTGTTCCCAACAGAATCCGGTTATCAAATAGAAAAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR TCA 72 bp | GCTCCTCACAAGAGAAGTCAGGTAGCATTACAGAGATaGAGAGTTGCCTGTAGATTCAGCAAGAATGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: APHKRSQVALQR*RVACRFSKNAF Trigger: GAAGGCATTCTTGCTGAATCTACAGGCAACTCTTCATCTCTGTAATGCTACCTGACTTCTCTTGTGAGGAGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR TCA 72 bp | ACACACCAGAAGAGGGCATTGGATTACCATTACAGATaGTTTTGCACCACCATGTGGTTGCTGGGAACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: THQKRALDYHYR*FCTTMWLLGTE Trigger: TTCAGTTCCCAGCAACCACATGGTGGTGCAAAATCATCTGTAATGGTAATCCAATGCCCTCTTCTGGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 72 bp | CAAGCACAAGTTGGTCTGACCGCAGTCTCTCTGTCCTaGAGTTTGATATACATGACTGACTTTCTCTACATC | + |
|
Preference number: 3 (lower is better) Translates to: QAQVGLTAVSLS*SLIYMTDFLYI Trigger: GATGTAGAGAAAGTCAGTCATGTATATCAAACTCCAGGACAGAGAGACTGCGGTCAGACCAACTTGTGCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 72 bp | GGGAGATTTGAATCTGAGGCAGAAGTAGGCAAGGAATaGGAGGCCTACGTTTTTCTTCTCATTATCTCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GRFESEAEVGKE*EAYVFLLIISK Trigger: CTTCGAGATAATGAGAAGAAAAACGTAGGCCTCCCATTCCTTGCCTACTTCTGCCTCAGATTCAAATCTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | CATATTTCATTTGAACTTACAGTGCTATTAAGTAGCATTTGGCAGTCCTTGAACTTAGGCCAGGAGGCCTaGTTTCTAGCTGGGCCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HISFELTVLLSSIWQSLNLGQEA*FLAGPL Trigger: AAGCGGCCCAGCTAGAAACAAGGCCTCCTGGCCTAA...GTTCAAGGACTGCCAAATGCTACTTAATAGCACTGTAAGTTCAAATGAAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGACACACTTTTCTATTTGATAACCGGATTCTGTTGGGAACACAAAGGTCCCAGAAGTCATCCATCTaGCTCCTCAGCTTCAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: FGHTFLFDNRILLGTQRSQKSSI*LLSFNL Trigger: CAGGTTGAAGCTGAGGAGCAAGATGGATGACTTCTG...GGACCTTTGTGTTCCCAACAGAATCCGGTTATCAAATAGAAAAGTGTGTCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR TCA 72 bp | CGCAGTCTCTCTGTCCTGGAGTTTGATATACATGACTaGCTTTCTCTACATCCAGTCTTAGGGATTGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: RSLSVLEFDIHD*LSLHPVLGIES Trigger: GGATTCAATCCCTAAGACTGGATGTAGAGAAAGTCAGTCATGTATATCAAACTCCAGGACAGAGAGACTGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 72 bp | ACAAGTGCAACAAGTATGAGAACTGCACCAGGAACATaGCATGCTTTACAACCAGGGAATGTTTACTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TSATSMRTAPGT*HALQPGNVYCE Trigger: CTCACAGTAAACATTCCCTGGTTGTAAAGCATGGCATGTTCCTGGTGCAGTTCTCATACTTGTTGCACTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 72 bp | TCCACACTTTACAACAAGTGCAACAAGTATGAGAACTaGACCAGGAACATGCCATGCTTTACAACCAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: STLYNKCNKYEN*TRNMPCFTTRE Trigger: TTCCCTGGTTGTAAAGCATGGCATGTTCCTGGTGCAGTTCTCATACTTGTTGCACTTGTTGTAAAGTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 72 bp | ACTGTCACTCTCTTCAGACACACCAGAAGAGGGCATTaGATTACCATTACAGATGATTTTGCACCACCATGT | + |
|
Preference number: 3 (lower is better) Translates to: TVTLFRHTRRGH*ITITDDFAPPC Trigger: ACATGGTGGTGCAAAATCATCTGTAATGGTAATCCAATGCCCTCTTCTGGTGTGTCTGAAGAGAGTGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | CATATTTCATTTGAACTTACAGTGCTATTAAGTAGCATTTGGCAGTCCTTGAACTCTAGCTGGGCCGCTTaGCCATCTCCCTACCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: HISFELTVLLSSIWQSLNSSWAA*PSPYLH Trigger: ATGTAGGTAGGGAGATGGCAAAGCGGCCCAGCTAGA...GTTCAAGGACTGCCAAATGCTACTTAATAGCACTGTAAGTTCAAATGAAATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | CATGTTAAGCCAGATTTCTTTCTTGCCTCACAGGACTCCACAACACTTTGCTGGCCAGAATTTGGAAGCTaGAGACAGAGTTATCACATA | + |
|
Preference number: 3 (lower is better) Translates to: HVKPDFFLASQDSTTLCWPEFGS*RQSYHI Trigger: TATGTGATAACTCTGTCTCAAGCTTCCAAATTCTGG...CCAGCAAAGTGTTGTGGAGTCCTGTGAGGCAAGAAAGAAATCTGGCTTAACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGACACACTTTTCTATTTGATAACCGGATTCTGTTGGGAACACAAAGGTCCAGCCAGATTTCTTTCTaGCCTCACAGGACTCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: FGHTFLFDNRILLGTQRSSQISF*PHRTPQ Trigger: TTGTGGAGTCCTGTGAGGCAAGAAAGAAATCTGGCT...GGACCTTTGTGTTCCCAACAGAATCCGGTTATCAAATAGAAAAGTGTGTCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CCA 72 bp | GCATCTTCTAACCTCTATAGTCACCAGTCCCACCTCTaGGAGTACTTTCTTTTAGCTATACTTGTTCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ASSNLYSHQSHL*EYFLLAILVQF Trigger: GAACTGAACAAGTATAGCTAAAAGAAAGTACTCCCAGAGGTGGGACTGGTGACTATAGAGGTTAGAAGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | ACACTTTTCTATTTGATAACCGGATTCTGTTGGGAACACAAAGGTCCTTGTGCTCCTAGGGTGGGACTTTaGAAATGTATGGCCATATAC | + |
|
Preference number: 3 (lower is better) Translates to: TLFYLITGFCWEHKGPCAPRVGL*KCMAIY Trigger: GTATATGGCCATACATTTCAAAAGTCCCACCCTAGG...AGCACAAGGACCTTTGTGTTCCCAACAGAATCCGGTTATCAAATAGAAAAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTGCTCCTCAGCTTCAACCTGATTAATTCGTGTAAAACCTTTCGATCTTACCCAAAAGACGGAAACTaGGACTTGTGTGATGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: ILLLSFNLINSCKTFRSYPKDGN*DLCDGY Trigger: GTACCCATCACACAAGTCCAAGTTTCCGTCTTTTGG...GTAAGATCGAAAGGTTTTACACGAATTAATCAGGTTGAAGCTGAGGAGCAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR TCA 72 bp | CTCAGAAGTCATCCATCTTGCTCCTCAGCTTCAACCTaGTTAATTCGTGTAAAACCTTTCGATCTTACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LRSHPSCSSAST*LIRVKPFDLTL Trigger: CAAGGTAAGATCGAAAGGTTTTACACGAATTAATCAGGTTGAAGCTGAGGAGCAAGATGGATGACTTCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR TCA 72 bp | GTGTCAGACACTACAAGTTTGAACCAACATCAGCTATaGGTCATGTTAAGCCAGATTTCTTTCTTGCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VSDTTSLNQHQL*VMLSQISFLPH Trigger: GTGAGGCAAGAAAGAAATCTGGCTTAACATGACTCATAGCTGATGTTGGTTCAAACTTGTAGTGTCTGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR TCA 72 bp | TATCTGTATGACTGTATGGAAGAGCAGACCTGTATCTaGGAAGAGTTTCAGTGTAATCATGCCTCATTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: YLYDCMEEQTCI*EEFQCNHASLC Trigger: GCACAATGAGGCATGATTACACTGAAACTCTTCTCAGATACAGGTCTGCTCTTCCATACAGTCATACAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR GCA 72 bp | ATGCAGGCCCATTTAAGGACCTTATTAGCACTTGTCTaGTTCCGTAAGCATTTATTGATGATCATGTTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: MQAHLRTLLALV*FRKHLLMIMLH Trigger: GTGCAACATGATCATCAATAAATGCTTACGGAAGCAGACAAGTGCTAATAAGGTCCTTAAATGGGCCTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | AATAAACTGCCTGGTGTCAGACACTACAAGTTTGAACCAACATCAGCTATGAGTTCATGTTGCACACATTaGGAATCCCAGAATTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NKLPGVRHYKFEPTSAMSSCCTH*ESQNLE Trigger: TTCCAAATTCTGGGATTCCAAATGTGTGCAACATGA...ACTCATAGCTGATGTTGGTTCAAACTTGTAGTGTCTGACACCAGGCAGTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | GATGAAGAGTTGCCTGTAGATTCAGCAAGAATGCCTTCAAAAGTAAATGCATACCCTTGTTACTTGGTATaGGCTGCAACCAATAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: DEELPVDSARMPSKVNAYPCYLV*AATNRF Trigger: AAACCTATTGGTTGCAGCCAATACCAAGTAACAAGG...GTATGCATTTACTTTTGAAGGCATTCTTGCTGAATCTACAGGCAACTCTTCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | TTATTAGCACTTGTCTGCTTCCGTAAGCATTTATTGATGATCATGTTGCACACACAAAAGAGAAAGAGTTaGGAACCAACCCTATGCATG | + |
|
Preference number: 3 (lower is better) Translates to: LLALVCFRKHLLMIMLHTQKRKS*EPTLCM Trigger: CATGCATAGGGTTGGTTCCAAACTCTTTCTCTTTTG...TGTGTGCAACATGATCATCAATAAATGCTTACGGAAGCAGACAAGTGCTAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR TCA 72 bp | TGTTGCACACATTTGGAATCCCAGAATTTGGAAGCTTaGGACAGAGTTATCACATATTTGAAGCTAAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: CCTHLESQNLEA*DRVITYLKLNW Trigger: CCAGTTTAGCTTCAAATATGTGATAACTCTGTCTCAAGCTTCCAAATTCTGGGATTCCAAATGTGTGCAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR TCA 72 bp | GCATACAGTCAAACATGCCTTTATAGACATACAACTTaGAGCAATAAAAACAGGAAAGCTTGTCAAGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: AYSQTCLYRHTT*SNKNRKACQGG Trigger: CCCACCTTGACAAGCTTTCCTGTTTTTATTGCTTCAAGTTGTATGTCTATAAAGGCATGTTTGACTGTATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | GATGAAGAGTTGCCTGTAGATTCAGCAAGAATGCCTTCAAAAGTAAATGCATACAGATATTATCCATCTTaGTACTTTTCACAGACCACC | + |
|
Preference number: 3 (lower is better) Translates to: DEELPVDSARMPSKVNAYRYYPS*YFSQTT Trigger: GGTGGTCTGTGAAAAGTACAAAGATGGATAATATCT...GTATGCATTTACTTTTGAAGGCATTCTTGCTGAATCTACAGGCAACTCTTCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTGCTCCTCAGCTTCAACCTGATTAATTCGTGTAAAACCTTTCGATCTTACTTCCGTAAGCATTTATaGATGATCATGTTGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: ILLLSFNLINSCKTFRSYFRKHL*MIMLHT Trigger: TGTGTGCAACATGATCATCAATAAATGCTTACGGAA...GTAAGATCGAAAGGTTTTACACGAATTAATCAGGTTGAAGCTGAGGAGCAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR TCA 72 bp | AATTTAATGTTAATAAAGCAATGCAGAGTCCTTTCATaGAGGAGAGAAGGGAAGCCCTCTACTTGTCTGATA | + |
|
Preference number: 3 (lower is better) Translates to: NLMLIKQCRVLS*RREGKPSTCLI Trigger: TATCAGACAAGTAGAGGGCTTCCCTTCTCTCCTTCATGAAAGGACTCTGCATTGCTTTATTAACATTAAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR-3UTR CAA 90 bp | CATATTTCATTTGAACTTACAGTGCTATTAAGTAGCATTTGGCAGTCCTTGAACCTTTCCCACTGTTCTTaGGCACAGAAAGAAAACTAT | + |
|
Preference number: 3 (lower is better) Translates to: HISFELTVLLSSIWQSLNLSHCS*AQKENY Trigger: ATAGTTTTCTTTCTGTGCCAAAGAACAGTGGGAAAG...GTTCAAGGACTGCCAAATGCTACTTAATAGCACTGTAAGTTCAAATGAAATATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR TCA 72 bp | CTTACTGAAGTAAATTTAGCTCTCCAAACTGAAATGTaGTGTTCTCATGCTGAAAAACACGCCAAAAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LTEVNLALQTEM*CSHAEKHAKKN Trigger: GTTCTTTTTGGCGTGTTTTTCAGCATGAGAACATCACATTTCAGTTTGGAGAGCTAAATTTACTTCAGTAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS-3UTR CCA 90 bp | GTGCTATCTGTAGGACCAGGCCATATCTGGCTTCCCCTGAGCTCCCACAAGGAGGGCACCTCCGAGCTGTaGGCATCTCCTGATAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLSVGPGHIWLPLSSHKEGTSEL*ASPDNN Trigger: GTTATTATCAGGAGATGCCCACAGCTCGGAGGTGCC...CTCCTTGTGGGAGCTCAGGGGAAGCCAGATATGGCCTGGTCCTACAGATAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | ACTAAGGCTGGTTTCTCATCCTTAGGCCAGGAGGCCTaGTTTCTAGCTGGGCCGCTTTGCCATCTCCCTACC | + |
|
Preference number: 4 (lower is better) Translates to: TKAGFSSLGQEA*FLAGPLCHLPT Trigger: GGTAGGGAGATGGCAAAGCGGCCCAGCTAGAAACAAGGCCTCCTGGCCTAAGGATGAGAAACCAGCCTTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | CTTAGGCCAGGAGGCCTTGTTTCTAGCTGGGCCGCTTaGCCATCTCCCTACCTACATAGCCTTACTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: LRPGGLVSSWAA*PSPYLHSLTEI Trigger: TATCTCAGTAAGGCTATGTAGGTAGGGAGATGGCAAAGCGGCCCAGCTAGAAACAAGGCCTCCTGGCCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS-3UTR TCA 90 bp | GTGCTATCTGTAGGACCAGGCCATATCTGGCTTCCCCTGAGCTCCCACAAGGAGTTTTTCCTTTTGAAGTaGTATCGACTCGGACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLSVGPGHIWLPLSSHKEFFLLK*YRLGQG Trigger: ACCCTGTCCGAGTCGATATCACTTCAAAAGGAAAAA...CTCCTTGTGGGAGCTCAGGGGAAGCCAGATATGGCCTGGTCCTACAGATAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS-3UTR TCA 90 bp | CTTACAGTAGTCACTTCACACGGCTTTCCATCAAGACTCGGATGCCACCCGGGGTCGCATTTTTCCTTTTaGAGTGATATCGACTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTVVTSHGFPSRLGCHPGSHFSF*SDIDSD Trigger: GTCCGAGTCGATATCACTTCAAAAGGAAAAATGCGA...CCCCGGGTGGCATCCGAGTCTTGATGGAAAGCCGTGTGAAGTGACTACTGTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | CATTGCTGCAGCCTCAGCCCCACCTTGCCTTGTTACTaGGTATTGGCTGCAACCAATAGGTTTCAAGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: HCCSLSPTLPCY*VLAATNRFQDS Trigger: TGAATCTTGAAACCTATTGGTTGCAGCCAATACCAAGTAACAAGGCAAGGTGGGGCTGAGGCTGCAGCAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | AGATTTCTTTCTTGCCTCACAGGACTCCACAACACTTaGCTGGCCCTAGTGTCTGCAGAGACCTACCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RFLSCLTGLHNT*LALVSAETYQL Trigger: AAGTTGGTAGGTCTCTGCAGACACTAGGGCCAGCAAAGTGTTGTGGAGTCCTGTGAGGCAAGAAAGAAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | CTACAGAAGCACTACCAACTGAGCTACTTCTCCAGCTaGGGAGTAGTTGCTTCTTTCCCTCCATTTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQKHYQLSYFSS*GVVASFPPFGS Trigger: GGAACCAAATGGAGGGAAAGAAGCAACTACTCCCAAGCTGGAGAAGTAGCTCAGTTGGTAGTGCTTCTGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS-3UTR TCA 90 bp | CTTACAGTAGTCACTTCACACGGCTTTCCATCAAGACTCGGATGCCACCCGGGGCCACTTCTGACGTTTTaGTGTAATTCACATATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTVVTSHGFPSRLGCHPGPLLTF*CNSHIL Trigger: CAAGATATGTGAATTACATCAAAACGTCAGAAGTGG...CCCCGGGTGGCATCCGAGTCTTGATGGAAAGCCGTGTGAAGTGACTACTGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS-3UTR TCA 90 bp | AGTGACATTAATATTGACCTCATACAAAGGATGAAAGCTGGGTTTTTCTTGTGTGCGGAGATCCAGTCCTaGGGCTTCACCCCCGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SDINIDLIQRMKAGFFLCAEIQS*GFTPGT Trigger: TGTTCCGGGGGTGAAGCCTCAGGACTGGATCTCCGC...ACACAAGAAAAACCCAGCTTTCATCCTTTGTATGAGGTCAATATTAATGTCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | AGTGTGAGCCACCGCACCTGTCCTAGGGTGGGACTTTaGAAATGTATGGCCATATACATAAAAACACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSHRTCPRVGL*KCMAIYIKTQC Trigger: ACACTGTGTTTTTATGTATATGGCCATACATTTCAAAAGTCCCACCCTAGGACAGGTGCGGTGGCTCACACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | AATTGTGAAGTGAATCCAAAAGACGGAAACTTGGACTaGTGTGATGGGTACCTGCTGACCCACATGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: NCEVNPKDGNLD*CDGYLLTHMST Trigger: TGTGGACATGTGGGTCAGCAGGTACCCATCACACAAGTCCAAGTTTCCGTCTTTTGGATTCACTTCACAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | GACAGTAATTGTGAAGTGAATCCAAAAGACGGAAACTaGGACTTGTGTGATGGGTACCTGCTGACCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: DSNCEVNPKDGN*DLCDGYLLTHM Trigger: CATGTGGGTCAGCAGGTACCCATCACACAAGTCCAAGTTTCCGTCTTTTGGATTCACTTCACAATTACTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | CAAGTTGGTCTGACCGCAGTCTCTCTGTCCTGGAGTTaGATATACATGACTGACTTTCTCTACATCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVGLTAVSLSWS*IYMTDFLYIQS Trigger: AGACTGGATGTAGAGAAAGTCAGTCATGTATATCAAACTCCAGGACAGAGAGACTGCGGTCAGACCAACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | CTCCAGCCCTCGTGTGTTAGTTCTATTCTTAGTCTTTaGAGGAGCCTCTGCACTGATACAATGCCTGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: LQPSCVSSILSL*RSLCTDTMPGL Trigger: TAATCCAGGCATTGTATCAGTGCAGAGGCTCCTCAAAAGACTAAGAATAGAACTAACACACGAGGGCTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | TTTGATAACCGGATTCTGTTGGGAACACAAAGGTCCTaGTGCTCACTAGGGAAGCCAGGAATGCTAAATATG | + |
|
Preference number: 4 (lower is better) Translates to: FDNRILLGTQRS*CSLGKPGMLNM Trigger: CATATTTAGCATTCCTGGCTTCCCTAGTGAGCACAAGGACCTTTGTGTTCCCAACAGAATCCGGTTATCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS-3UTR GCA 90 bp | ATCTTGCTCCTCAGCTTCAACCTGATTAATTCGTGTAAAACCTTTCGATCTTACTTAAGGAAGCCGACATaGTCTTCTCCGTCTACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLLSFNLINSCKTFRSYLRKPT*SSPSTS Trigger: GCTGGTAGACGGAGAAGAGCATGTCGGCTTCCTTAA...GTAAGATCGAAAGGTTTTACACGAATTAATCAGGTTGAAGCTGAGGAGCAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS-3UTR GCA 90 bp | AGTGACATTAATATTGACCTCATACAAAGGATGAAAGCTGGGTTTTTCTTGTGTTGCCAGCTCCGCTTTTaGCTGTTTTACTGCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SDINIDLIQRMKAGFFLCCQLRF*LFYCCH Trigger: GTGGCAGCAGTAAAACAGGCAAAAGCGGAGCTGGCA...ACACAAGAAAAACCCAGCTTTCATCCTTTGTATGAGGTCAATATTAATGTCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | ACAATTTGTCCTCCAAGAGACAAAGTAATTTCAGGCTaGCAGTGCATTCAGGAGGCATCTTCTAACCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: TICPPRDKVISG*QCIQEASSNLY Trigger: ATAGAGGTTAGAAGATGCCTCCTGAATGCACTGCAAGCCTGAAATTACTTTGTCTCTTGGAGGACAAATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | ACTATCAGGCCTAACCCAGGGTGTTCCTTTATGATTTaGCTACAAAGACAATTTGTCCTCCAAGAGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TIRPNPGCSFMI*LQRQFVLQETK Trigger: CTTTGTCTCTTGGAGGACAAATTGTCTTTGTAGCAAAATCATAAAGGAACACCCTGGGTTAGGCCTGATAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS-3UTR CCA 90 bp | ACACTTTTCTATTTGATAACCGGATTCTGTTGGGAACACAAAGGTCCTTGTGCTCATCATCATAACCATTaGGTTCATCAGAAAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TLFYLITGFCWEHKGPCAHHHNH*VHQKVC Trigger: ACAGACTTTCTGATGAACCCAATGGTTATGATGATG...AGCACAAGGACCTTTGTGTTCCCAACAGAATCCGGTTATCAAATAGAAAAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | ACCTTATTAGCACTTGTCTGCTTCCGTAAGCATTTATaGATGATCATGTTGCACACATTTGGAATCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLLALVCFRKHL*MIMLHTFGIPE Trigger: TTCTGGGATTCCAAATGTGTGCAACATGATCATCAATAAATGCTTACGGAAGCAGACAAGTGCTAATAAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS-3UTR CCA 90 bp | GATGAAGAGTTGCCTGTAGATTCAGCAAGAATGCCTTCAAAAGTAAATGCATACCAGGCAATTCATGGTTaGAATTCAACATGTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: DEELPVDSARMPSKVNAYQAIHG*NSTCSL Trigger: CAATGAACATGTTGAATTCCAACCATGAATTGCCTG...GTATGCATTTACTTTTGAAGGCATTCTTGCTGAATCTACAGGCAACTCTTCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | ATGTTGCACACATTTGGAATCCCAGAATTTGGAAGCTaGAGACAGAGTTATCACATATTTGAAGCTAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: MLHTFGIPEFGS*RQSYHIFEAKL Trigger: CAGTTTAGCTTCAAATATGTGATAACTCTGTCTCAAGCTTCCAAATTCTGGGATTCCAAATGTGTGCAACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| 3UTR CAA 72 bp | CTCACTAGGGAAGCCAGGAATGCTAAATATGCAGGGTaGTCTTTTCAAGAGAAAAGATGTATAGCTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTREARNAKYAG*SFQEKRCIAYF Trigger: AAAATAAGCTATACATCTTTTCTCTTGAAAAGACAACCCTGCATATTTAGCATTCCTGGCTTCCCTAGTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS TCA 90 bp | TGCTCTTCTCCGTCTACCAGCACTCGGGCCGCGGAGATCCAGTCCTaGGGCTTCACCCCCGGAACAACCGCACGTCCCTCGATCTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CSSPSTSTRAAEIQS*GFTPGTTARPSILK Trigger: TTTTAAGATCGAGGGACGTGCGGTTGTTCCGGGGGTGAAGCCTCAGGACTGGATCTCCGCGGCCCGAGTGCTGGTAGACGGAGAAGAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS-3UTR CAA 90 bp | GGCCAGGAGGCCTTGTTTCTAGCTGGGCCGCTTTGCCATCTCCCTACCTACATATTGCCAGCTCCGCTTTaGCCTGTTTTACTGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GQEALFLAGPLCHLPTYILPAPL*PVLLLP Trigger: TGGCAGCAGTAAAACAGGCAAAAGCGGAGCTGGCAA...TATGTAGGTAGGGAGATGGCAAAGCGGCCCAGCTAGAAACAAGGCCTCCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS-3UTR CAA 90 bp | CATGTTAAGCCAGATTTCTTTCTTGCCTCACAGGACTCCACAACACTTTGCTGGATTTGCCAGAGGACTTaGAAGAGAAGAGTCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HVKPDFFLASQDSTTLCWICQRT*KRRVWS Trigger: TGACCAGACTCTTCTCTTCAAAGTCCTCTGGCAAAT...CCAGCAAAGTGTTGTGGAGTCCTGTGAGGCAAGAAAGAAATCTGGCTTAACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS CCA 90 bp | GAAGAGAAGAGTCTGGTCATAAACTCAGAGACATCAGGCAATTCATaGTTGGAATTCAACATGTTCATTGACTGCTCCATCTCCCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EEKSLVINSETSGNS*LEFNMFIDCSISRL Trigger: GAGACGGGAGATGGAGCAGTCAATGAACATGTTGAATTCCAACCATGAATTGCCTGATGTCTCTGAGTTTATGACCAGACTCTTCTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS TCA 90 bp | TTTGCCTGTTTTACTGCTGCCACTACTAGATTTGCCAGAGGACTTTaGAGAGAAGAGTCTGGTCATAAACTCAGAGACATCAGGCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: FACFTAATTRFARGL*REESGHKLRDIRQF Trigger: GAATTGCCTGATGTCTCTGAGTTTATGACCAGACTCTTCTCTTCAAAGTCCTCTGGCAAATCTAGTAGTGGCAGCAGTAAAACAGGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS-3UTR CAA 90 bp | TTTGGACACACTTTTCTATTTGATAACCGGATTCTGTTGGGAACACAAAGGTCCCTGCCACTACTAGATTaGCCAGAGGACTTTGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FGHTFLFDNRILLGTQRSLPLLD*PEDFEE Trigger: CTCTTCAAAGTCCTCTGGCAAATCTAGTAGTGGCAG...GGACCTTTGTGTTCCCAACAGAATCCGGTTATCAAATAGAAAAGTGTGTCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS-3UTR CAA 90 bp | ATCTTGCTCCTCAGCTTCAACCTGATTAATTCGTGTAAAACCTTTCGATCTTACAATTCAACATGTTCATaGACTGCTCCATCTCCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILLLSFNLINSCKTFRSYNSTCS*TAPSPV Trigger: GACGGGAGATGGAGCAGTCAATGAACATGTTGAATT...GTAAGATCGAAAGGTTTTACACGAATTAATCAGGTTGAAGCTGAGGAGCAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS-3UTR CAA 90 bp | ACACTTTTCTATTTGATAACCGGATTCTGTTGGGAACACAAAGGTCCTTGTGCTTCAGGCAATTCATGGTaGGAATTCAACATGTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: TLFYLITGFCWEHKGPCASGNSW*EFNMFI Trigger: AATGAACATGTTGAATTCCAACCATGAATTGCCTGA...AGCACAAGGACCTTTGTGTTCCCAACAGAATCCGGTTATCAAATAGAAAAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS TCA 72 bp | CCGTCTACCAGCACTCGGGCCGCGGAGATCCAGTCCTaGGGCTTCACCCCCGGAACAACCGCACGTCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PSTSTRAAEIQS*GFTPGTTARPS Trigger: CGAGGGACGTGCGGTTGTTCCGGGGGTGAAGCCTCAGGACTGGATCTCCGCGGCCCGAGTGCTGGTAGACGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS CCA 72 bp | GGGCCCTCGGCAGCAGCCCCAGGCACCTCCGAGCTGTaGGCATCTCCTGATAATAACAGAAGCAGGACGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GPSAAAPGTSEL*ASPDNNRSRTE Trigger: CTCCGTCCTGCTTCTGTTATTATCAGGAGATGCCCACAGCTCGGAGGTGCCTGGGGCTGCTGCCGAGGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS CAA 90 bp | GAGAAGAGTCTGGTCATAAACTCAGAGACATCAGGCAATTCATGGTaGGAATTCAACATGTTCATTGACTGCTCCATCTCCCGTCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: EKSLVINSETSGNSW*EFNMFIDCSISRLM Trigger: CATGAGACGGGAGATGGAGCAGTCAATGAACATGTTGAATTCCAACCATGAATTGCCTGATGTCTCTGAGTTTATGACCAGACTCTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||
| CDS TCA 72 bp | AATTCACATATCTTGCTCGCATTTTTCCTTTTGAAGTaGTATCGACTCGGACAGGGTCAAACTTGTAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: NSHILLAFFLLK*YRLGQGQTCKQ Trigger: CTGCTTACAAGTTTGACCCTGTCCGAGTCGATATCACTTCAAAAGGAAAAATGCGAGCAAGATATGTGAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069747.6 |
||