Pregenerated sensors for EMC10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008140Ensembl transcript IDs: ENSMUST00000118515.9, ENSMUST00000118808.9, ENSMUST00000138328.3, ENSMUST00000239015.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGGTGGGGCAGGCTGGTGGGTGTTTAGCAGACAGAGGAGCACAGTaGCACATGGTGGGACACAGTTGCAGTGAGCTGGCTACAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: GVGQAGGCLADRGAQ*HMVGHSCSELATGR Trigger: CCTCCCTGTAGCCAGCTCACTGCAACTGTGTCCCACCATGTGGCACTGTGCTCCTCTGTCTGCTAAACACCCACCAGCCTGCCCCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR TCA 90 bp | AGCAGACAGAGGAGCACAGTGCCACATGGTGGGACACAGTTGCAGTaGGCTGGCTACAGGGAGGTCCACCCAAGCTCTCAGTCAACAGGA | + |
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Preference number: 1 (lower is better) Translates to: SRQRSTVPHGGTQLQ*AGYREVHPSSQSTG Trigger: TCCTGTTGACTGAGAGCTTGGGTGGACCTCCCTGTAGCCAGCTCACTGCAACTGTGTCCCACCATGTGGCACTGTGCTCCTCTGTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR TCA 90 bp | CACAGCGGCAACTCAGGACTATTCACAAGCACAGAAGGCAGGAAGTaGGCTGAAGAGTGGCTGTTTAGGGGACAGTTTAATCAGCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: HSGNSGLFTSTEGRK*AEEWLFRGQFNQQP Trigger: TGGCTGCTGATTAAACTGTCCCCTAAACAGCCACTCTTCAGCTCACTTCCTGCCTTCTGTGCTTGTGAATAGTCCTGAGTTGCCGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCCCACAGCGGCGCATGTGCAAGAGCACGGCCATGCCAGCAGCTGTCGAGCAGGGACACAGTTGCAGTaGGCTGGCTACAGGGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: MPTAAHVQEHGHASSCRAGTQLQ*AGYREV Trigger: GACCTCCCTGTAGCCAGCTCACTGCAACTGTGTCCC...TGCTCGACAGCTGCTGGCATGGCCGTGCTCTTGCACATGCGCCGCTGTGGGCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCCCACAGCGGCGCATGTGCAAGAGCACGGCCATGCCAGCAGCTGTCGAGCAAGACAGCATGCCACCTaGACAGTGGGCTGGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: MPTAAHVQEHGHASSCRARQHAT*TVGWRL Trigger: CAGCCTCCAGCCCACTGTCCAGGTGGCATGCTGTCT...TGCTCGACAGCTGCTGGCATGGCCGTGCTCTTGCACATGCGCCGCTGTGGGCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR GCA 90 bp | CCCACAGCGGCGCATGTGCAAGAGCACGGCCATGCCAGCAGCTGTCGAGCAGCTGACAGAGGAGCACAGTaGCACATGGTGGGACACAGT | + |
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Preference number: 2 (lower is better) Translates to: PTAAHVQEHGHASSCRAADRGAQ*HMVGHS Trigger: ACTGTGTCCCACCATGTGGCACTGTGCTCCTCTGTC...AGCTGCTCGACAGCTGCTGGCATGGCCGTGCTCTTGCACATGCGCCGCTGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGACAGAGGAGCACAGTGCCACATGGTGGGACACAGTTGCAGTGAGCTGGCTTCTAGGTGGCACAGCTaGTCACCGGCTGCTGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: ADRGAQCHMVGHSCSELASRWHS*SPAAAP Trigger: GGGGGCAGCAGCCGGTGAGCAGCTGTGCCACCTAGA...AGCCAGCTCACTGCAACTGTGTCCCACCATGTGGCACTGTGCTCCTCTGTCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118515.9 |
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| 3UTR-3UTR CCA 90 bp | CCCACAGCGGCGCATGTGCAAGAGCACGGCCATGCCAGCAGCTGTCGAGCAGCTGAGCACAGTGCCACATaGTGGGACACAGTTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: PTAAHVQEHGHASSCRAAEHSAT*WDTVAV Trigger: CACTGCAACTGTGTCCCACCATGTGGCACTGTGCTC...AGCTGCTCGACAGCTGCTGGCATGGCCGTGCTCTTGCACATGCGCCGCTGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCACCTGGACAGTGGGCTGGAGGCTGACCTAGCCACTAAGAGCAGAGGCCTCGGTGGGGCAGGCTGGTaGGTGTTTAGCAGACAGAGG | + |
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Preference number: 2 (lower is better) Translates to: CHLDSGLEADLATKSRGLGGAGW*VFSRQR Trigger: CCTCTGTCTGCTAAACACCCACCAGCCTGCCCCACC...GAGGCCTCTGCTCTTAGTGGCTAGGTCAGCCTCCAGCCCACTGTCCAGGTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR TCA 90 bp | GCCACTAAGAGCAGAGGCCTCTGGGCCACAGATCCTTGGCAAAGGGCTGGAGAGGGGACACAGTTGCAGTaGGCTGGCTACAGGGAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: ATKSRGLWATDPWQRAGEGTQLQ*AGYREV Trigger: GACCTCCCTGTAGCCAGCTCACTGCAACTGTGTCCC...CTCTCCAGCCCTTTGCCAAGGATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACTAAGAGCAGAGGCCTCTGGGCCACAGATCCTTGGCAAAGGGCTGGAGAGTCCCAAAGTGTATGGTaGGGTGGGGTGGGGCAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: ATKSRGLWATDPWQRAGESQSVW*GGVGQA Trigger: AGCCTGCCCCACCCCACCCCACCATACACTTTGGGA...CTCTCCAGCCCTTTGCCAAGGATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCCCACAGCGGCGCATGTGCAAGAGCACGGCCATGCCAGCAGCTGTCGAGCAAAGAGCAGAGGCCTCTaGGCCACAGATCCTTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: MPTAAHVQEHGHASSCRAKSRGL*ATDPWQ Trigger: TTGCCAAGGATCTGTGGCCCAGAGGCCTCTGCTCTT...TGCTCGACAGCTGCTGGCATGGCCGTGCTCTTGCACATGCGCCGCTGTGGGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACTAAGAGCAGAGGCCTCTGGGCCACAGATCCTTGGCAAAGGGCTGGAGAGAGACAGCATGCCACCTaGACAGTGGGCTGGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: ATKSRGLWATDPWQRAGERQHAT*TVGWRL Trigger: CAGCCTCCAGCCCACTGTCCAGGTGGCATGCTGTCT...CTCTCCAGCCCTTTGCCAAGGATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR GCA 90 bp | ACAACACAGCTGAGGCTGCACAGCAATCCCCATGCCCACAGCGGCGCATGTGCAGACAGAGGAGCACAGTaGCACATGGTGGGACACAGT | + |
|
Preference number: 2 (lower is better) Translates to: TTQLRLHSNPHAHSGACADRGAQ*HMVGHS Trigger: ACTGTGTCCCACCATGTGGCACTGTGCTCCTCTGTC...TGCACATGCGCCGCTGTGGGCATGGGGATTGCTGTGCAGCCTCAGCTGTGTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGGCTGGAGGCTGACCTAGCCACTAAGAGCAGAGGCCTCTGGGCCACAGATCACAGTGCCACATGGTaGGACACAGTTGCAGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: SGLEADLATKSRGLWATDHSATW*DTVAVS Trigger: GCTCACTGCAACTGTGTCCCACCATGTGGCACTGTG...ATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGGCTAGGTCAGCCTCCAGCCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGGCTGGAGGCTGACCTAGCCACTAAGAGCAGAGGCCTCTGGGCCACAGATGAGCACAGTGCCACATaGTGGGACACAGTTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SGLEADLATKSRGLWATDEHSAT*WDTVAV Trigger: CACTGCAACTGTGTCCCACCATGTGGCACTGTGCTC...ATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGGCTAGGTCAGCCTCCAGCCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGCCACTAAGAGCAGAGGCCTCTGGGCCACAGATCCTTGGCAAAGGGCTGGATCCTTGGCAAAGGGCTaGAGAGTGACAGTGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: LATKSRGLWATDPWQRAGSLAKG*RVTVRG Trigger: GCCCCTCACTGTCACTCTCCAGCCCTTTGCCAAGGA...TCCAGCCCTTTGCCAAGGATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGGCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACTAAGAGCAGAGGCCTCTGGGCCACAGATCCTTGGCAAAGGGCTGGAGAGAAGAGCAGAGGCCTCTaGGCCACAGATCCTTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: ATKSRGLWATDPWQRAGEKSRGL*ATDPWQ Trigger: TTGCCAAGGATCTGTGGCCCAGAGGCCTCTGCTCTT...CTCTCCAGCCCTTTGCCAAGGATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGCCACTAAGAGCAGAGGCCTCTGGGCCACAGATCCTTGGCAAAGGGCTGGAGCAAAGAAGACAGCATaGCACCTGGACAGTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LATKSRGLWATDPWQRAGAKKTA*HLDSGL Trigger: CAGCCCACTGTCCAGGTGGCATGCTGTCTTCTTTGC...TCCAGCCCTTTGCCAAGGATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCAAGAGCACGGCCATGCCAGCAGCTGTCGAGCAGCTAGTGCAAAACCGGCACAGTGCCACATGGTaGGACACAGTTGCAGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: MCKSTAMPAAVEQLVQNRHSATW*DTVAVS Trigger: GCTCACTGCAACTGTGTCCCACCATGTGGCACTGTG...CCGGTTTTGCACTAGCTGCTCGACAGCTGCTGGCATGGCCGTGCTCTTGCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR GCA 90 bp | ACAACACAGCTGAGGCTGCACAGCAATCCCCATGCCCACAGCGGCGCATGTGCACCGGCTCTCAAAACCTaGACACAAGTCACTCGAAGT | + |
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Preference number: 2 (lower is better) Translates to: TTQLRLHSNPHAHSGACAPALKT*TQVTRS Trigger: ACTTCGAGTGACTTGTGTGCAGGTTTTGAGAGCCGG...TGCACATGCGCCGCTGTGGGCATGGGGATTGCTGTGCAGCCTCAGCTGTGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGCTGCACAGCAATCCCCATGGGGTGGGGCAGGCTaGTGGGTGTTTAGCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: GQFNQQPHNTAEAAQQSPWGGAG*WVFSRQ Trigger: CTGTCTGCTAAACACCCACCAGCCTGCCCCACCCCA...TGGGGATTGCTGTGCAGCCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGCTGCACAGCAATCCCCATCCCAAAGTGTATGGTaGGGTGGGGTGGGGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: GQFNQQPHNTAEAAQQSPSQSVW*GGVGQA Trigger: AGCCTGCCCCACCCCACCCCACCATACACTTTGGGA...TGGGGATTGCTGTGCAGCCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCACCTGGACAGTGGGCTGGAGGCTGACCTAGCCACTAAGAGCAGAGGCCTCAGCCTTCCATATTCATaGAATAGGGAAATGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: CHLDSGLEADLATKSRGLSLPYS*NREMWG Trigger: TCCCCACATTTCCCTATTGCATGAATATGGAAGGCT...GAGGCCTCTGCTCTTAGTGGCTAGGTCAGCCTCCAGCCCACTGTCCAGGTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR GCA 90 bp | GCATGCCACCTGGACAGTGGGCTGGAGGCTGACCTAGCCACTAAGAGCAGAGGCAGCCTTCCATATTCATaGAATAGGGAAATGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: ACHLDSGLEADLATKSRGSLPYS*NREMWG Trigger: TCCCCACATTTCCCTATTGCATGAATATGGAAGGCT...GCCTCTGCTCTTAGTGGCTAGGTCAGCCTCCAGCCCACTGTCCAGGTGGCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | CACAATCCTCTCCTGGTGACAGATCCAGGCTATGACATCCAAAGGCAGAAAGGATGGGGTGGGGCAGGCTaGTGGGTGTTTAGCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: HNPLLVTDPGYDIQRQKGWGGAG*WVFSRQ Trigger: CTGTCTGCTAAACACCCACCAGCCTGCCCCACCCCA...TCCTTTCTGCCTTTGGATGTCATAGCCTGGATCTGTCACCAGGAGAGGATTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGAAGAGTGGCTGTTTAGGGGACAGTTTAATCAGCAGCCACACAACACAGTGGGGTGGGGCAGGCTaGTGGGTGTTTAGCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: ELKSGCLGDSLISSHTTQWGGAG*WVFSRQ Trigger: CTGTCTGCTAAACACCCACCAGCCTGCCCCACCCCA...CTGTGTTGTGTGGCTGCTGATTAAACTGTCCCCTAAACAGCCACTCTTCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGTGGCTGTTTAGGGGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGTCCCAAAGTGTATGGTaGGGTGGGGTGGGGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: KSGCLGDSLISSHTTQLRSQSVW*GGVGQA Trigger: AGCCTGCCCCACCCCACCCCACCATACACTTTGGGA...CCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCCCCTAAACAGCCACTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGCTGCACAGCAATCCTCTCAGTCAACAGGATaGGAGAGAGGCTCAGGGACA | + |
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Preference number: 2 (lower is better) Translates to: RGQFNQQPHNTAEAAQQSSQSTG*ERGSGT Trigger: TGTCCCTGAGCCTCTCTCTCATCCTGTTGACTGAGA...GGATTGCTGTGCAGCCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGACAGAGGAGCACAGTGCCACATGGTGGGACACAGTTGCAGTGAGCTGGCTAGCCTTCCATATTCATaGAATAGGGAAATGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: ADRGAQCHMVGHSCSELASLPYS*NREMWG Trigger: TCCCCACATTTCCCTATTGCATGAATATGGAAGGCT...AGCCAGCTCACTGCAACTGTGTCCCACCATGTGGCACTGTGCTCCTCTGTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGTGGCTGTTTAGGGGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGCACAGTGCCACATGGTaGGACACAGTTGCAGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: KSGCLGDSLISSHTTQLRHSATW*DTVAVS Trigger: GCTCACTGCAACTGTGTCCCACCATGTGGCACTGTG...CCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCCCCTAAACAGCCACTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR TCA 90 bp | CACAATCCTCTCCTGGTGACAGATCCAGGCTATGACATCCAAAGGCAGAAAGGATCTCAGTCAACAGGATaGGAGAGAGGCTCAGGGACA | + |
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Preference number: 2 (lower is better) Translates to: HNPLLVTDPGYDIQRQKGSQSTG*ERGSGT Trigger: TGTCCCTGAGCCTCTCTCTCATCCTGTTGACTGAGA...TCCTTTCTGCCTTTGGATGTCATAGCCTGGATCTGTCACCAGGAGAGGATTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR CCA 72 bp | CAGAGGCCTCTGGGCCACAGATCCTTGGCAAAGGGCTaGAGAGTGACAGTGAGGGGCGCACGGGGCCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: QRPLGHRSLAKG*RVTVRGARGLQ Trigger: CTGCAGGCCCCGTGCGCCCCTCACTGTCACTCTCCAGCCCTTTGCCAAGGATCTGTGGCCCAGAGGCCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR GCA 72 bp | GCTGCACAGCAATCCCCATGCCCACAGCGGCGCATGTaGAAGAGCACGGCCATGCCAGCAGCTGTCGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: AAQQSPCPQRRM*KSTAMPAAVEQ Trigger: CTGCTCGACAGCTGCTGGCATGGCCGTGCTCTTGCACATGCGCCGCTGTGGGCATGGGGATTGCTGTGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR GCA 72 bp | CCACACAACACAGCTGAGGCTGCACAGCAATCCCCATaGCCACAGCGGCGCATGTGCAAGAGCACGGCCATG | + |
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Preference number: 3 (lower is better) Translates to: PHNTAEAAQQSP*PQRRMCKSTAM Trigger: CATGGCCGTGCTCTTGCACATGCGCCGCTGTGGGCATGGGGATTGCTGTGCAGCCTCAGCTGTGTTGTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CAA 90 bp | ATGCCCACAGCGGCGCATGTGCAAGAGCACGGCCATGCCAGCAGCTGTCGAGCAGAGGCTGGAGAGAGCTaGGCAAGTTCCCAAAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: MPTAAHVQEHGHASSCRAEAGES*ASSQSV Trigger: TACACTTTGGGAACTTGCCAAGCTCTCTCCAGCCTC...TGCTCGACAGCTGCTGGCATGGCCGTGCTCTTGCACATGCGCCGCTGTGGGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CAA 90 bp | CCACTAAGAGCAGAGGCCTCTGGGCCACAGATCCTTGGCAAAGGGCTGGAGAGTCTGGGCCACAGATCCTaGGCAAAGGGCTGGAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: PLRAEASGPQILGKGLESLGHRS*AKGWRV Trigger: CACTCTCCAGCCCTTTGCCAAGGATCTGTGGCCCAG...ACTCTCCAGCCCTTTGCCAAGGATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR GCA 72 bp | CAGGCTGGTGGGTGTTTAGCAGACAGAGGAGCACAGTaGCACATGGTGGGACACAGTTGCAGTGAGCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: QAGGCLADRGAQ*HMVGHSCSELA Trigger: AGCCAGCTCACTGCAACTGTGTCCCACCATGTGGCACTGTGCTCCTCTGTCTGCTAAACACCCACCAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR TCA 72 bp | TACAGGGAGGTCCACCCAAGCTCTCAGTCAACAGGATaGGAGAGAGGCTCAGGGACAGAAAGAGGGGCTTAC | + |
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Preference number: 3 (lower is better) Translates to: YREVHPSSQSTG*ERGSGTERGAY Trigger: GTAAGCCCCTCTTTCTGTCCCTGAGCCTCTCTCTCATCCTGTTGACTGAGAGCTTGGGTGGACCTCCCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGCTGCACAGCAATCCGAGGCTGGAGAGAGCTaGGCAAGTTCCCAAAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: RGQFNQQPHNTAEAAQQSEAGES*ASSQSV Trigger: TACACTTTGGGAACTTGCCAAGCTCTCTCCAGCCTC...GGATTGCTGTGCAGCCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| 3UTR TCA 72 bp | AACTCAGGACTATTCACAAGCACAGAAGGCAGGAAGTaGGCTGAAGAGTGGCTGTTTAGGGGACAGTTTAAT | + |
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Preference number: 3 (lower is better) Translates to: NSGLFTSTEGRK*AEEWLFRGQFN Trigger: ATTAAACTGTCCCCTAAACAGCCACTCTTCAGCTCACTTCCTGCCTTCTGTGCTTGTGAATAGTCCTGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| CDS-3UTR GCA 90 bp | CCCACAGCGGCGCATGTGCAAGAGCACGGCCATGCCAGCAGCTGTCGAGCAGCTCGGGGCCTGGAGCAGTaGTGGGAGGCCGCAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PTAAHVQEHGHASSCRAARGLEQ*WEAAAA Trigger: TGCAGCTGCGGCCTCCCAGCACTGCTCCAGGCCCCG...AGCTGCTCGACAGCTGCTGGCATGGCCGTGCTCTTGCACATGCGCCGCTGTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| CDS-3UTR CCA 90 bp | CCGCCGCCCTGGCCCCCAGCGTCCGGCGCTCCCGACATCATGAGGAACAGCACAACGTGCAAGGTCAGCTaGTCCGAAAGGTGCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPPWPPASGAPDIMRNSTTCKVS*SERCDS Trigger: GGAGTCGCACCTTTCGGACCAGCTGACCTTGCACGT...TGTGCTGTTCCTCATGATGTCGGGAGCGCCGGACGCTGGGGGCCAGGGCGGCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118515.9 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGAGAGTGACAGTGAGGGGCGCACGGGGCCTGCAGGGCAAAGGCACAGAGCTCCTGTGGGTTCTTaGCCTTCTGGGCCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLESDSEGRTGPAGQRHRAPVGS*PSGPAP Trigger: TGGAGCAGGCCCAGAAGGCCAAGAACCCACAGGAGC...TCTGTGCCTTTGCCCTGCAGGCCCCGTGCGCCCCTCACTGTCACTCTCCAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGCTGGAGAGTGACAGTGAGGGGCGCACGGGGCCTGCAGGGCAAAGGCACAAGCTGGTCCGAAAGGTaGGACTCCACCAGGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGWRVTVRGARGLQGKGTSWSER*DSTREH Trigger: GTGCTCCCTGGTGGAGTCGCACCTTTCGGACCAGCT...TGTGCCTTTGCCCTGCAGGCCCCGTGCGCCCCTCACTGTCACTCTCCAGCCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGACAGAAAGAGGGGCTTACAGGAAGGCCAGAGGGCTCACTGAAGGGACAGCGGGGCCTGGAGCAGTaGTGGGAGGCCGCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGQKEGLTGRPEGSLKGQRGLEQ*WEAAAA Trigger: TGCAGCTGCGGCCTCCCAGCACTGCTCCAGGCCCCG...CTGTCCCTTCAGTGAGCCCTCTGGCCTTCCTGTAAGCCCCTCTTTCTGTCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGAGAGTGACAGTGAGGGGCGCACGGGGCCTGCAGGGCAAAGGCACAGAAGGGTGCCATCCTGCTaGTTCCAGAGCAGCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLESDSEGRTGPAGQRHRRVPSC*FQSSKP Trigger: AGGCTTGCTGCTCTGGAACCAGCAGGATGGCACCCT...TCTGTGCCTTTGCCCTGCAGGCCCCGTGCGCCCCTCACTGTCACTCTCCAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGAGAGTGACAGTGAGGGGCGCACGGGGCCTGCAGGGCAAAGGCACAGAACGTGCAAGGTCAGCTaGTCCGAAAGGTGCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLESDSEGRTGPAGQRHRTCKVS*SERCDS Trigger: GGAGTCGCACCTTTCGGACCAGCTGACCTTGCACGT...TCTGTGCCTTTGCCCTGCAGGCCCCGTGCGCCCCTCACTGTCACTCTCCAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | GCTCAGGGACAGAAAGAGGGGCTTACAGGAAGGCCAGAGGGCTCACTGAAGGGATGCAGTCTCGGGGCCTaGAGCAGTGCTGGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AQGQKEGLTGRPEGSLKGCSLGA*SSAGRP Trigger: CGGCCTCCCAGCACTGCTCCAGGCCCCGAGACTGCA...TCCCTTCAGTGAGCCCTCTGGCCTTCCTGTAAGCCCCTCTTTCTGTCCCTGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | GCATGCCACCTGGACAGTGGGCTGGAGGCTGACCTAGCCACTAAGAGCAGAGGCAGCTGGTCCGAAAGGTaGGACTCCACCAGGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ACHLDSGLEADLATKSRGSWSER*DSTREH Trigger: GTGCTCCCTGGTGGAGTCGCACCTTTCGGACCAGCT...GCCTCTGCTCTTAGTGGCTAGGTCAGCCTCCAGCCCACTGTCCAGGTGGCATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | GCATGCCACCTGGACAGTGGGCTGGAGGCTGACCTAGCCACTAAGAGCAGAGGCGCTCCTGTGGGTTCTTaGCCTTCTGGGCCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ACHLDSGLEADLATKSRGAPVGS*PSGPAP Trigger: TGGAGCAGGCCCAGAAGGCCAAGAACCCACAGGAGC...GCCTCTGCTCTTAGTGGCTAGGTCAGCCTCCAGCCCACTGTCCAGGTGGCATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR TCA 90 bp | CCACTAAGAGCAGAGGCCTCTGGGCCACAGATCCTTGGCAAAGGGCTGGAGAGTCACGCTCCTCCTCACTaGGCTGTCGCTGTGTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLRAEASGPQILGKGLESHAPPH*AVAVLP Trigger: CGGCAACACAGCGACAGCTCAGTGAGGAGGAGCGTG...ACTCTCCAGCCCTTTGCCAAGGATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR TCA 90 bp | GCCACTAAGAGCAGAGGCCTCTGGGCCACAGATCCTTGGCAAAGGGCTGGAGAGCCCTGTAGAGGCCATTaGCAGCAGCCACATCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ATKSRGLWATDPWQRAGEPCRGH*QQPHPG Trigger: TCCGGGATGTGGCTGCTGTCAATGGCCTCTACAGGG...CTCTCCAGCCCTTTGCCAAGGATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | GGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGCTGCACAGCAATCCCCACGGGGCCTGGAGCAGTaGTGGGAGGCCGCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQFNQQPHNTAEAAQQSPRGLEQ*WEAAAA Trigger: TGCAGCTGCGGCCTCCCAGCACTGCTCCAGGCCCCG...TGGGGATTGCTGTGCAGCCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGCTGCACAGCAATCCCTCCGTTGGCGCTGGTaGAGGCCCTGGGGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGQFNQQPHNTAEAAQQSLRWRW*RPWGSR Trigger: CCTGCTGCCCCAGGGCCTGCACCAGCGCCAACGGAG...GGATTGCTGTGCAGCCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118515.9 |
||
| CDS-3UTR TCA 90 bp | CATGCAATAGGGAAATGTGGGGACAGGAACTCCTTCTTGGGCTGGCTCTGGGGGCACGCTCCTCCTCACTaGGCTGTCGCTGTGTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HAIGKCGDRNSFLGWLWGHAPPH*AVAVLP Trigger: CGGCAACACAGCGACAGCTCAGTGAGGAGGAGCGTG...CCCCCAGAGCCAGCCCAAGAAGGAGTTCCTGTCCCCACATTTCCCTATTGCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR TCA 90 bp | TGGGACACAGTTGCAGTGAGCTGGCTACAGGGAGGTCCACCCAAGCTCTCAGTCCCCTGTAGAGGCCATTaGCAGCAGCCACATCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WDTVAVSWLQGGPPKLSVPCRGH*QQPHPG Trigger: TCCGGGATGTGGCTGCTGTCAATGGCCTCTACAGGG...GACTGAGAGCTTGGGTGGACCTCCCTGTAGCCAGCTCACTGCAACTGTGTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | ACAACACAGCTGAGGCTGCACAGCAATCCCCATGCCCACAGCGGCGCATGTGCAGACAGGGTGCCATCCTaGTGGTTCCAGAGCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TTQLRLHSNPHAHSGACADRVPS*WFQSSK Trigger: CTTGCTGCTCTGGAACCAGCAGGATGGCACCCTGTC...TGCACATGCGCCGCTGTGGGCATGGGGATTGCTGTGCAGCCTCAGCTGTGTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGACAGAAAGAGGGGCTTACAGGAAGGCCAGAGGGCTCACTGAAGGGACAGTTGGCCTTCTGGGCCTaGTCCATCTCCAGGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGQKEGLTGRPEGSLKGQLAFWA*SISRRS Trigger: TGAGCGCCTGGAGATGGAGCAGGCCCAGAAGGCCAA...CTGTCCCTTCAGTGAGCCCTCTGGCCTTCCTGTAAGCCCCTCTTTCTGTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | CCCACAGCGGCGCATGTGCAAGAGCACGGCCATGCCAGCAGCTGTCGAGCAGCTGCAAAGAAAGACTTCTaGTCCTGTGGGTTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTAAHVQEHGHASSCRAAAKKDF*SCGFLA Trigger: GGCCAAGAACCCACAGGAGCAGAAGTCTTTCTTTGC...AGCTGCTCGACAGCTGCTGGCATGGCCGTGCTCTTGCACATGCGCCGCTGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | CTAGCCACTAAGAGCAGAGGCCTCTGGGCCACAGATCCTTGGCAAAGGGCTGGAGGGTTCTTGGCCTTCTaGGCCTGCTCCATCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LATKSRGLWATDPWQRAGGFLAF*ACSISR Trigger: CCTGGAGATGGAGCAGGCCCAGAAGGCCAAGAACCC...TCCAGCCCTTTGCCAAGGATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGGCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | TGCCACCTGGACAGTGGGCTGGAGGCTGACCTAGCCACTAAGAGCAGAGGCCTCAGACTTCTGCTCCTGTaGGTTCTTGGCCTTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CHLDSGLEADLATKSRGLRLLLL*VLGLLG Trigger: GCCCAGAAGGCCAAGAACCCACAGGAGCAGAAGTCT...GAGGCCTCTGCTCTTAGTGGCTAGGTCAGCCTCCAGCCCACTGTCCAGGTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | CCACTAAGAGCAGAGGCCTCTGGGCCACAGATCCTTGGCAAAGGGCTGGAGAGTGACAGGGTGCCATCCTaGTGGTTCCAGAGCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLRAEASGPQILGKGLESDRVPS*WFQSSK Trigger: CTTGCTGCTCTGGAACCAGCAGGATGGCACCCTGTC...ACTCTCCAGCCCTTTGCCAAGGATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | TGGGACACAGTTGCAGTGAGCTGGCTACAGGGAGGTCCACCCAAGCTCTCAGTCCCAGCCACATCCACGTaGAAGGTCAGCTGGTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: WDTVAVSWLQGGPPKLSVPATST*KVSWSE Trigger: TTCGGACCAGCTGACCTTGCACGTGGATGTGGCTGG...GACTGAGAGCTTGGGTGGACCTCCCTGTAGCCAGCTCACTGCAACTGTGTCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | GCTCAGGGACAGAAAGAGGGGCTTACAGGAAGGCCAGAGGGCTCACTGAAGGGAAGGGTGCCATCCTGCTaGTTCCAGAGCAGCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AQGQKEGLTGRPEGSLKGRVPSC*FQSSKP Trigger: AGGCTTGCTGCTCTGGAACCAGCAGGATGGCACCCT...TCCCTTCAGTGAGCCCTCTGGCCTTCCTGTAAGCCCCTCTTTCTGTCCCTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | GCCCACAATCCTCTCCTGGTGACAGATCCAGGCTATGACATCCAAAGGCAGAAATGCAGTCTCGGGGCCTaGAGCAGTGCTGGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AHNPLLVTDPGYDIQRQKCSLGA*SSAGRP Trigger: CGGCCTCCCAGCACTGCTCCAGGCCCCGAGACTGCA...TTTCTGCCTTTGGATGTCATAGCCTGGATCTGTCACCAGGAGAGGATTGTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR TCA 90 bp | GGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGCTGCACAGCAATCCCCATCTCCAGGCGCTCAATaGAGGCTGCAGTCTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQFNQQPHNTAEAAQQSPSPGAQ*RLQSRG Trigger: GCCCCGAGACTGCAGCCTTCATTGAGCGCCTGGAGA...TGGGGATTGCTGTGCAGCCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | AAGAAGACAGCATGCCACCTGGACAGTGGGCTGGAGGCTGACCTAGCCACTAAGGTGTTGCCGACAGGGTaGCATCCTGCTGGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KKTACHLDSGLEADLATKVLPTG*HPAGSR Trigger: TCTGGAACCAGCAGGATGGCACCCTGTCGGCAACAC...CTTAGTGGCTAGGTCAGCCTCCAGCCCACTGTCCAGGTGGCATGCTGTCTTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | GCATGCCACCTGGACAGTGGGCTGGAGGCTGACCTAGCCACTAAGAGCAGAGGCGCAAAGAAAGACTTCTaGTCCTGTGGGTTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ACHLDSGLEADLATKSRGAKKDF*SCGFLA Trigger: GGCCAAGAACCCACAGGAGCAGAAGTCTTTCTTTGC...GCCTCTGCTCTTAGTGGCTAGGTCAGCCTCCAGCCCACTGTCCAGGTGGCATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGGCTGGAGGCTGACCTAGCCACTAAGAGCAGAGGCCTCTGGGCCACAGATACGAAGGAAGACACATaGCCGCCAGCTTCTGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SGLEADLATKSRGLWATDTKEDT*PPASEP Trigger: TGGTTCAGAAGCTGGCGGCCATGTGTCTTCCTTCGT...ATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGGCTAGGTCAGCCTCCAGCCCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGTGGCTGTTTAGGGGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGTGCAGTCTCGGGGCCTaGAGCAGTGCTGGGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KSGCLGDSLISSHTTQLRCSLGA*SSAGRP Trigger: CGGCCTCCCAGCACTGCTCCAGGCCCCGAGACTGCA...CCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCCCCTAAACAGCCACTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | GCTCAGGGACAGAAAGAGGGGCTTACAGGAAGGCCAGAGGGCTCACTGAAGGGAAGACTTCTGCTCCTGTaGGTTCTTGGCCTTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AQGQKEGLTGRPEGSLKGRLLLL*VLGLLG Trigger: GCCCAGAAGGCCAAGAACCCACAGGAGCAGAAGTCT...TCCCTTCAGTGAGCCCTCTGGCCTTCCTGTAAGCCCCTCTTTCTGTCCCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | CCACTAAGAGCAGAGGCCTCTGGGCCACAGATCCTTGGCAAAGGGCTGGAGAGTAGACTTCTGCTCCTGTaGGTTCTTGGCCTTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLRAEASGPQILGKGLESRLLLL*VLGLLG Trigger: GCCCAGAAGGCCAAGAACCCACAGGAGCAGAAGTCT...ACTCTCCAGCCCTTTGCCAAGGATCTGTGGCCCAGAGGCCTCTGCTCTTAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR TCA 90 bp | ACAACACAGCTGAGGCTGCACAGCAATCCCCATGCCCACAGCGGCGCATGTGCAATCACCGAGCTCAAATaGATGCTCCAGCAGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TTQLRLHSNPHAHSGACAITELK*MLQQQS Trigger: GCTTTGCTGCTGGAGCATTCATTTGAGCTCGGTGAT...TGCACATGCGCCGCTGTGGGCATGGGGATTGCTGTGCAGCCTCAGCTGTGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR TCA 90 bp | GCCCACAATCCTCTCCTGGTGACAGATCCAGGCTATGACATCCAAAGGCAGAAACACGCTCCTCCTCACTaGGCTGTCGCTGTGTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AHNPLLVTDPGYDIQRQKHAPPH*AVAVLP Trigger: CGGCAACACAGCGACAGCTCAGTGAGGAGGAGCGTG...TTTCTGCCTTTGGATGTCATAGCCTGGATCTGTCACCAGGAGAGGATTGTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | GTGGAGGCCCACAATCCTCTCCTGGTGACAGATCCAGGCTATGACATCCAAAGGGTGTTGCCGACAGGGTaGCATCCTGCTGGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VEAHNPLLVTDPGYDIQRVLPTG*HPAGSR Trigger: TCTGGAACCAGCAGGATGGCACCCTGTCGGCAACAC...CCTTTGGATGTCATAGCCTGGATCTGTCACCAGGAGAGGATTGTGGGCCTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGCTGCACAGCAATCCAGCTGGTCCGAAAGGTaGGACTCCACCAGGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGQFNQQPHNTAEAAQQSSWSER*DSTREH Trigger: GTGCTCCCTGGTGGAGTCGCACCTTTCGGACCAGCT...GGATTGCTGTGCAGCCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR TCA 90 bp | CACAATCCTCTCCTGGTGACAGATCCAGGCTATGACATCCAAAGGCAGAAAGGATCTCCAGGCGCTCAATaGAGGCTGCAGTCTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HNPLLVTDPGYDIQRQKGSPGAQ*RLQSRG Trigger: GCCCCGAGACTGCAGCCTTCATTGAGCGCCTGGAGA...TCCTTTCTGCCTTTGGATGTCATAGCCTGGATCTGTCACCAGGAGAGGATTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR TCA 90 bp | TACAGGAAGGCCAGAGGGCTCACTGAAGGGACAGCCTTCCATATTCATGCAATATCTCCAGGCGCTCAATaGAGGCTGCAGTCTCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YRKARGLTEGTAFHIHAISPGAQ*RLQSRG Trigger: GCCCCGAGACTGCAGCCTTCATTGAGCGCCTGGAGA...TATTGCATGAATATGGAAGGCTGTCCCTTCAGTGAGCCCTCTGGCCTTCCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGCTGCACAGCAATCCCCAGCCACATCCACGTaGAAGGTCAGCTGGTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGQFNQQPHNTAEAAQQSPATST*KVSWSE Trigger: TTCGGACCAGCTGACCTTGCACGTGGATGTGGCTGG...GGATTGCTGTGCAGCCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | GCCCACAATCCTCTCCTGGTGACAGATCCAGGCTATGACATCCAAAGGCAGAAATTGGCCTTCTGGGCCTaGTCCATCTCCAGGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AHNPLLVTDPGYDIQRQKLAFWA*SISRRS Trigger: TGAGCGCCTGGAGATGGAGCAGGCCCAGAAGGCCAA...TTTCTGCCTTTGGATGTCATAGCCTGGATCTGTCACCAGGAGAGGATTGTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGACAGAAAGAGGGGCTTACAGGAAGGCCAGAGGGCTCACTGAAGGGACAGGCAAAGAAAGACTTCTaGTCCTGTGGGTTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGQKEGLTGRPEGSLKGQAKKDF*SCGFLA Trigger: GGCCAAGAACCCACAGGAGCAGAAGTCTTTCTTTGC...CTGTCCCTTCAGTGAGCCCTCTGGCCTTCCTGTAAGCCCCTCTTTCTGTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | GGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGCTGCACAGCAATCCCCAACGTGCAAGGTCAGCTaGTCCGAAAGGTGCGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQFNQQPHNTAEAAQQSPTCKVS*SERCDS Trigger: GGAGTCGCACCTTTCGGACCAGCTGACCTTGCACGT...TGGGGATTGCTGTGCAGCCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR TCA 90 bp | GCCTTCCATATTCATGCAATAGGGAAATGTGGGGACAGGAACTCCTTCTTGGGCCCCTGTAGAGGCCATTaGCAGCAGCCACATCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: AFHIHAIGKCGDRNSFLGPCRGH*QQPHPG Trigger: TCCGGGATGTGGCTGCTGTCAATGGCCTCTACAGGG...GCCCAAGAAGGAGTTCCTGTCCCCACATTTCCCTATTGCATGAATATGGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGAGGGCTCACTGAAGGGACAGCCTTCCATATTCATGCAATAGGGAAATGTTTGGCCTTCTGGGCCTaGTCCATCTCCAGGCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ARGLTEGTAFHIHAIGKCLAFWA*SISRRS Trigger: TGAGCGCCTGGAGATGGAGCAGGCCCAGAAGGCCAA...ACATTTCCCTATTGCATGAATATGGAAGGCTGTCCCTTCAGTGAGCCCTCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCCAGAGGGCTCACTGAAGGGACAGCCTTCCATATTCATGCAATAGGGAAAGGGTTCTTGGCCTTCTaGGCCTGCTCCATCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KARGLTEGTAFHIHAIGKGFLAF*ACSISR Trigger: CCTGGAGATGGAGCAGGCCCAGAAGGCCAAGAACCC...TTTCCCTATTGCATGAATATGGAAGGCTGTCCCTTCAGTGAGCCCTCTGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCATATTCATGCAATAGGGAAATGTGGGGACAGGAACTCCTTCTTGGGCGCTCCTGTGGGTTCTTaGCCTTCTGGGCCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFHIHAIGKCGDRNSFLGAPVGS*PSGPAP Trigger: TGGAGCAGGCCCAGAAGGCCAAGAACCCACAGGAGC...GCCCAAGAAGGAGTTCCTGTCCCCACATTTCCCTATTGCATGAATATGGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGTGGCTGTTTAGGGGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGGACAGGGTGCCATCCTaGTGGTTCCAGAGCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSGCLGDSLISSHTTQLRDRVPS*WFQSSK Trigger: CTTGCTGCTCTGGAACCAGCAGGATGGCACCCTGTC...CCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCCCCTAAACAGCCACTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCCAGAGGGCTCACTGAAGGGACAGCCTTCCATATTCATGCAATAGGGAAACCAGCCACATCCACGTaGAAGGTCAGCTGGTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: KARGLTEGTAFHIHAIGKPATST*KVSWSE Trigger: TTCGGACCAGCTGACCTTGCACGTGGATGTGGCTGG...TTTCCCTATTGCATGAATATGGAAGGCTGTCCCTTCAGTGAGCCCTCTGGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTGAAGAGTGGCTGTTTAGGGGACAGTTTAATCAGCAGCCACACAACACAGAGGGTGCCATCCTGCTaGTTCCAGAGCAGCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ELKSGCLGDSLISSHTTQRVPSC*FQSSKP Trigger: AGGCTTGCTGCTCTGGAACCAGCAGGATGGCACCCT...CTGTGTTGTGTGGCTGCTGATTAAACTGTCCCCTAAACAGCCACTCTTCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | TTCCATATTCATGCAATAGGGAAATGTGGGGACAGGAACTCCTTCTTGGGCTGGGGGTTCTTGGCCTTCTaGGCCTGCTCCATCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FHIHAIGKCGDRNSFLGWGFLAF*ACSISR Trigger: CCTGGAGATGGAGCAGGCCCAGAAGGCCAAGAACCC...CCAGCCCAAGAAGGAGTTCCTGTCCCCACATTTCCCTATTGCATGAATATGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGGGCAGGCTGGTGGGTGTTTAGCAGACAGAGGAGCACAGTGCCACATGGTGAGGAACAGCACAACTaGAATGATGTACATCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGAGWWVFSRQRSTVPHGEEQHN*NDVHPV Trigger: TACTGGATGTACATCATTCCAGTTGTGCTGTTCCTC...ACCATGTGGCACTGTGCTCCTCTGTCTGCTAAACACCCACCAGCCTGCCCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR TCA 90 bp | GCCCACAATCCTCTCCTGGTGACAGATCCAGGCTATGACATCCAAAGGCAGAAAATCACCGAGCTCAAATaGATGCTCCAGCAGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AHNPLLVTDPGYDIQRQKITELK*MLQQQS Trigger: GCTTTGCTGCTGGAGCATTCATTTGAGCTCGGTGAT...TTTCTGCCTTTGGATGTCATAGCCTGGATCTGTCACCAGGAGAGGATTGTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR TCA 90 bp | GCCCACAATCCTCTCCTGGTGACAGATCCAGGCTATGACATCCAAAGGCAGAAAGCTGCACAGATGTATTaGACAGCTCCAGGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AHNPLLVTDPGYDIQRQKAAQMY*TAPGPH Trigger: ATGAGGACCTGGAGCTGTTCAATACATCTGTGCAGC...TTTCTGCCTTTGGATGTCATAGCCTGGATCTGTCACCAGGAGAGGATTGTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTGAAGAGTGGCTGTTTAGGGGACAGTTTAATCAGCAGCCACACAACACAGACGAAGGAAGACACATaGCCGCCAGCTTCTGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: ELKSGCLGDSLISSHTTQTKEDT*PPASEP Trigger: TGGTTCAGAAGCTGGCGGCCATGTGTCTTCCTTCGT...CTGTGTTGTGTGGCTGCTGATTAAACTGTCCCCTAAACAGCCACTCTTCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR TCA 90 bp | AAGGCCAGAGGGCTCACTGAAGGGACAGCCTTCCATATTCATGCAATAGGGAAAGCTGCACAGATGTATTaGACAGCTCCAGGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KARGLTEGTAFHIHAIGKAAQMY*TAPGPH Trigger: ATGAGGACCTGGAGCTGTTCAATACATCTGTGCAGC...TTTCCCTATTGCATGAATATGGAAGGCTGTCCCTTCAGTGAGCCCTCTGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGTGGCTGTTTAGGGGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGGCTGCACAGATGTATTaGACAGCTCCAGGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSGCLGDSLISSHTTQLRAAQMY*TAPGPH Trigger: ATGAGGACCTGGAGCTGTTCAATACATCTGTGCAGC...CCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCCCCTAAACAGCCACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | CATGCAATAGGGAAATGTGGGGACAGGAACTCCTTCTTGGGCTGGCTCTGGGGGTGTACATCCAGTATTTaGCAAAGAAAGACTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HAIGKCGDRNSFLGWLWGCTSSI*QRKTSA Trigger: AGCAGAAGTCTTTCTTTGCCAAATACTGGATGTACA...CCCCCAGAGCCAGCCCAAGAAGGAGTTCCTGTCCCCACATTTCCCTATTGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCATATTCATGCAATAGGGAAATGTGGGGACAGGAACTCCTTCTTGGGCGAGGAACAGCACAACTaGAATGATGTACATCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AFHIHAIGKCGDRNSFLGEEQHN*NDVHPV Trigger: TACTGGATGTACATCATTCCAGTTGTGCTGTTCCTC...GCCCAAGAAGGAGTTCCTGTCCCCACATTTCCCTATTGCATGAATATGGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CCA 90 bp | GCCCACAATCCTCTCCTGGTGACAGATCCAGGCTATGACATCCAAAGGCAGAAATGTACATCCAGTATTTaGCAAAGAAAGACTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AHNPLLVTDPGYDIQRQKCTSSI*QRKTSA Trigger: AGCAGAAGTCTTTCTTTGCCAAATACTGGATGTACA...TTTCTGCCTTTGGATGTCATAGCCTGGATCTGTCACCAGGAGAGGATTGTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS TCA 90 bp | CAAGTGTCCCAGGCCGCCTCGGGACCCGGACCCTGTAGAGGCCATTaGCAGCAGCCACATCTGGGGGCCTCACCCGGAGTCGGCCACGCT | + |
|
Preference number: 5 (lower is better) Translates to: QVSQAASGPGPCRGH*QQPHLGASPGVGHA Trigger: AGCGTGGCCGACTCCGGGTGAGGCCCCCAGATGTGGCTGCTGTCAATGGCCTCTACAGGGTCCGGGTCCCGAGGCGGCCTGGGACACTTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138328.3 |
||
| CDS CCA 90 bp | CCTCGGGACCCGGACCCTGTAGAGGCCATTGACAGCAGCCACATCTaGGGGCCTCACCCGGAGTCGGCCACGCTCCTCCTCACTGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRDPDPVEAIDSSHI*GPHPESATLLLTEL Trigger: CAGCTCAGTGAGGAGGAGCGTGGCCGACTCCGGGTGAGGCCCCCAGATGTGGCTGCTGTCAATGGCCTCTACAGGGTCCGGGTCCCGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138328.3 |
||
| CDS TCA 90 bp | CCACATCTGGGGGCCTCACCCGGAGTCGGCCACGCTCCTCCTCACTaGGCTGTCGCTGTGTTGCCGACAGGGTGCCATCCTGCTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PHLGASPGVGHAPPH*AVAVLPTGCHPAGS Trigger: GGAACCAGCAGGATGGCACCCTGTCGGCAACACAGCGACAGCTCAGTGAGGAGGAGCGTGGCCGACTCCGGGTGAGGCCCCCAGATGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138328.3 |
||
| CDS GCA 90 bp | CTTGGCCTTCTGGGCCTGCTCCATCTCCAGGCGCTCAATGAAGGCTaGAGTCTCGGGGCCTGGAGCAGTGCTGGGAGGCCGCAGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGLLGLLHLQALNEG*SLGAWSSAGRPQLH Trigger: GTGCAGCTGCGGCCTCCCAGCACTGCTCCAGGCCCCGAGACTGCAGCCTTCATTGAGCGCCTGGAGATGGAGCAGGCCCAGAAGGCCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS GCA 90 bp | CACCCGGAGTCGGCCACGCTCCTCCTCACTGAGCTGTCGCTGTGTTaGCGACAGGGTGCCATCCTGCTGGTTCCAGAGCAGCAAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HPESATLLLTELSLC*RQGAILLVPEQQAS Trigger: CGAGGCTTGCTGCTCTGGAACCAGCAGGATGGCACCCTGTCGGCAACACAGCGACAGCTCAGTGAGGAGGAGCGTGGCCGACTCCGGGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138328.3 |
||
| CDS GCA 90 bp | CTCCATCACCGAGCTCAAATGAATGCTCCAGCAGCAAAGCCACGGTaGCACAGCCCTCAGCTTCACGGCCATCGGCCCCGGTCCCACGCG | + |
|
Preference number: 5 (lower is better) Translates to: LHHRAQMNAPAAKPR*HSPQLHGHRPRSHA Trigger: CGCGTGGGACCGGGGCCGATGGCCGTGAAGCTGAGGGCTGTGGCACCGTGGCTTTGCTGCTGGAGCATTCATTTGAGCTCGGTGATGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
||
| CDS GCA 90 bp | ATCCCGGAGTCGGCCACGCTCCTCCTCACTGAGCTGTCGCTGTGTTaGCGACAGGGTGCCATCCTGCTGGTTCCAGAGCAGCAAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: IPESATLLLTELSLC*RQGAILLVPEQQAS Trigger: CGAGGCTTGCTGCTCTGGAACCAGCAGGATGGCACCCTGTCGGCAACACAGCGACAGCTCAGTGAGGAGGAGCGTGGCCGACTCCGGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS CCA 90 bp | AGGTGCGACTCCACCAGGGAGCACGCTGGGACGAAGGAAGACACATaGCCGCCAGCTTCTGAACCATCAAGTGTCCCAGGCCGCCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RCDSTREHAGTKEDT*PPASEPSSVPGRLG Trigger: CCCGAGGCGGCCTGGGACACTTGATGGTTCAGAAGCTGGCGGCCATGTGTCTTCCTTCGTCCCAGCGTGCTCCCTGGTGGAGTCGCACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
||
| CDS CCA 90 bp | GACAGGCCCACCACGTTGCCAGCCACATCCACGTGCAAGGTCAGCTaGTCCGAAAGGTGCGACTCCACCAGGGAGCACGCTGGGACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DRPTTLPATSTCKVS*SERCDSTREHAGTK Trigger: CTTCGTCCCAGCGTGCTCCCTGGTGGAGTCGCACCTTTCGGACCAGCTGACCTTGCACGTGGATGTGGCTGGCAACGTGGTGGGCCTGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
||
| CDS-3UTR CAA 90 bp | CCGCCGCCCTGGCCCCCAGCGTCCGGCGCTCCCGACATCATGAGGAACAGCACAAGCTGCACAGATGTATaGAACAGCTCCAGGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PPPWPPASGAPDIMRNSTSCTDV*NSSRSS Trigger: TGAGGACCTGGAGCTGTTCAATACATCTGTGCAGCT...TGTGCTGTTCCTCATGATGTCGGGAGCGCCGGACGCTGGGGGCCAGGGCGGCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118515.9 |
||
| CDS GCA 90 bp | TACACCACCACAGACAGGCCCACCACGTTGCCAGCCACATCCACGTaGAAGGTCAGCTGGTCCGAAAGGTGCGACTCCACCAGGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: YTTTDRPTTLPATST*KVSWSERCDSTREH Trigger: GTGCTCCCTGGTGGAGTCGCACCTTTCGGACCAGCTGACCTTGCACGTGGATGTGGCTGGCAACGTGGTGGGCCTGTCTGTGGTGGTGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
||
| CDS-3UTR CAA 90 bp | GCAGACAGAGGAGCACAGTGCCACATGGTGGGACACAGTTGCAGTGAGCTGGCTGACAGGCCCACCACGTaGCCAGCCACATCCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ADRGAQCHMVGHSCSELADRPTT*PATSTC Trigger: GCACGTGGATGTGGCTGGCAACGTGGTGGGCCTGTC...AGCCAGCTCACTGCAACTGTGTCCCACCATGTGGCACTGTGCTCCTCTGTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS GCA 90 bp | ACGTTGCCAGCCACATCCACGTGCAAGGTCAGCTGGTCCGAAAGGTaGGACTCCACCAGGGAGCACGCTGGGACGAAGGAAGACACATGG | + |
|
Preference number: 5 (lower is better) Translates to: TLPATSTCKVSWSER*DSTREHAGTKEDTW Trigger: CCATGTGTCTTCCTTCGTCCCAGCGTGCTCCCTGGTGGAGTCGCACCTTTCGGACCAGCTGACCTTGCACGTGGATGTGGCTGGCAACGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
||
| CDS CCA 90 bp | CTGCTCCATCTCCAGGCGCTCAATGAAGGCTGCAGTCTCGGGGCCTaGAGCAGTGCTGGGAGGCCGCAGCTGCACAGATGTATTGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LLHLQALNEGCSLGA*SSAGRPQLHRCIEQ Trigger: CTGTTCAATACATCTGTGCAGCTGCGGCCTCCCAGCACTGCTCCAGGCCCCGAGACTGCAGCCTTCATTGAGCGCCTGGAGATGGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
||
| CDS GCA 90 bp | TCCTCCTCACTGAGCTGTCGCTGTGTTGCCGACAGGGTGCCATCCTaGTGGTTCCAGAGCAGCAAGCCTCGCTTCTGGAAGTTGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSLSCRCVADRVPS*WFQSSKPRFWKLAP Trigger: TGGAGCCAACTTCCAGAAGCGAGGCTTGCTGCTCTGGAACCAGCAGGATGGCACCCTGTCGGCAACACAGCGACAGCTCAGTGAGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
||
| CDS CCA 90 bp | TCCTCACTGAGCTGTCGCTGTGTTGCCGACAGGGTGCCATCCTGCTaGTTCCAGAGCAGCAAGCCTCGCTTCTGGAAGTTGGCTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLSCRCVADRVPSC*FQSSKPRFWKLAPS Trigger: TGATGGAGCCAACTTCCAGAAGCGAGGCTTGCTGCTCTGGAACCAGCAGGATGGCACCCTGTCGGCAACACAGCGACAGCTCAGTGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
||
| CDS-3UTR CAA 90 bp | AGGGGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGCTGCACAGCAATCCGACAGGCCCACCACGTaGCCAGCCACATCCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGQFNQQPHNTAEAAQQSDRPTT*PATSTC Trigger: GCACGTGGATGTGGCTGGCAACGTGGTGGGCCTGTC...GGATTGCTGTGCAGCCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS TCA 90 bp | CAGCAAGCCTCGCTTCTGGAAGTTGGCTCCATCACCGAGCTCAAATaGATGCTCCAGCAGCAAAGCCACGGTGCCACAGCCCTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QQASLLEVGSITELK*MLQQQSHGATALSF Trigger: GAAGCTGAGGGCTGTGGCACCGTGGCTTTGCTGCTGGAGCATTCATTTGAGCTCGGTGATGGAGCCAACTTCCAGAAGCGAGGCTTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
||
| CDS-3UTR CAA 90 bp | CACAATCCTCTCCTGGTGACAGATCCAGGCTATGACATCCAAAGGCAGAAAGGAGACAGGCCCACCACGTaGCCAGCCACATCCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HNPLLVTDPGYDIQRQKGDRPTT*PATSTC Trigger: GCACGTGGATGTGGCTGGCAACGTGGTGGGCCTGTC...TCCTTTCTGCCTTTGGATGTCATAGCCTGGATCTGTCACCAGGAGAGGATTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS CCA 90 bp | TATTTGGCAAAGAAAGACTTCTGCTCCTGTGGGTTCTTGGCCTTCTaGGCCTGCTCCATCTCCAGGCGCTCAATGAAGGCTGCAGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: YLAKKDFCSCGFLAF*ACSISRRSMKAAVS Trigger: CGAGACTGCAGCCTTCATTGAGCGCCTGGAGATGGAGCAGGCCCAGAAGGCCAAGAACCCACAGGAGCAGAAGTCTTTCTTTGCCAAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CAA 90 bp | GCATGCCACCTGGACAGTGGGCTGGAGGCTGACCTAGCCACTAAGAGCAGAGGCATGTACATCCAGTATTaGGCAAAGAAAGACTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ACHLDSGLEADLATKSRGMYIQY*AKKDFC Trigger: GCAGAAGTCTTTCTTTGCCAAATACTGGATGTACAT...GCCTCTGCTCTTAGTGGCTAGGTCAGCCTCCAGCCCACTGTCCAGGTGGCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CAA 90 bp | GGACAGTTTAATCAGCAGCCACACAACACAGCTGAGGCTGCACAGCAATCCCCAAGCTGCACAGATGTATaGAACAGCTCCAGGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GQFNQQPHNTAEAAQQSPSCTDV*NSSRSS Trigger: TGAGGACCTGGAGCTGTTCAATACATCTGTGCAGCT...TGGGGATTGCTGTGCAGCCTCAGCTGTGTTGTGTGGCTGCTGATTAAACTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS-3UTR CAA 90 bp | TTCCATATTCATGCAATAGGGAAATGTGGGGACAGGAACTCCTTCTTGGGCTGGATGAGGTGCCAGTATTaGGCAAAGAAAGACTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FHIHAIGKCGDRNSFLGWMRCQY*AKKDFC Trigger: GCAGAAGTCTTTCTTTGCCAAATACTGGCACCTCAT...CCAGCCCAAGAAGGAGTTCCTGTCCCCACATTTCCCTATTGCATGAATATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118515.9 |
||
| CDS-3UTR CAA 90 bp | GCCCACAATCCTCTCCTGGTGACAGATCCAGGCTATGACATCCAAAGGCAGAAAATGTACATCCAGTATTaGGCAAAGAAAGACTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AHNPLLVTDPGYDIQRQKMYIQY*AKKDFC Trigger: GCAGAAGTCTTTCTTTGCCAAATACTGGATGTACAT...TTTCTGCCTTTGGATGTCATAGCCTGGATCTGTCACCAGGAGAGGATTGTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118808.9 ENSMUST00000239015.2 |
||
| CDS TCA 72 bp | CAGGCCGCCTCGGGACCCGGACCCTGTAGAGGCCATTaGCAGCAGCCACATCCCGGAGTCGGCCACGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QAASGPGPCRGH*QQPHPGVGHAP Trigger: AGGAGCGTGGCCGACTCCGGGATGTGGCTGCTGTCAATGGCCTCTACAGGGTCCGGGTCCCGAGGCGGCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| CDS TCA 72 bp | CAGGCCGCCTCGGGACCCGGACCCTGTAGAGGCCATTaGCAGCAGCCACATCTGGGGGCCTCACCCGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: QAASGPGPCRGH*QQPHLGASPGV Trigger: GACTCCGGGTGAGGCCCCCAGATGTGGCTGCTGTCAATGGCCTCTACAGGGTCCGGGTCCCGAGGCGGCCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138328.3 |
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| CDS TCA 72 bp | GGGGCCTCACCCGGAGTCGGCCACGCTCCTCCTCACTaGGCTGTCGCTGTGTTGCCGACAGGGTGCCATCCT | + |
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Preference number: 6 (lower is better) Translates to: GASPGVGHAPPH*AVAVLPTGCHP Trigger: AGGATGGCACCCTGTCGGCAACACAGCGACAGCTCAGTGAGGAGGAGCGTGGCCGACTCCGGGTGAGGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138328.3 |
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| CDS GCA 72 bp | CTGGGCCTGCTCCATCTCCAGGCGCTCAATGAAGGCTaGAGTCTCGGGGCCTGGAGCAGTGCTGGGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: LGLLHLQALNEG*SLGAWSSAGRP Trigger: CGGCCTCCCAGCACTGCTCCAGGCCCCGAGACTGCAGCCTTCATTGAGCGCCTGGAGATGGAGCAGGCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| CDS CCA 72 bp | CCGGACCCTGTAGAGGCCATTGACAGCAGCCACATCTaGGGGCCTCACCCGGAGTCGGCCACGCTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PDPVEAIDSSHI*GPHPESATLLL Trigger: GAGGAGGAGCGTGGCCGACTCCGGGTGAGGCCCCCAGATGTGGCTGCTGTCAATGGCCTCTACAGGGTCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138328.3 |
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| CDS TCA 72 bp | CAGCCACATCCCGGAGTCGGCCACGCTCCTCCTCACTaGGCTGTCGCTGTGTTGCCGACAGGGTGCCATCCT | + |
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Preference number: 6 (lower is better) Translates to: QPHPGVGHAPPH*AVAVLPTGCHP Trigger: AGGATGGCACCCTGTCGGCAACACAGCGACAGCTCAGTGAGGAGGAGCGTGGCCGACTCCGGGATGTGGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000239015.2 |
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| CDS CCA 72 bp | CTCCAGGCGCTCAATGAAGGCTGCAGTCTCGGGGCCTaGAGCAGTGCTGGGAGGCCGCAGCTGCACAGATGT | + |
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Preference number: 6 (lower is better) Translates to: LQALNEGCSLGA*SSAGRPQLHRC Trigger: ACATCTGTGCAGCTGCGGCCTCCCAGCACTGCTCCAGGCCCCGAGACTGCAGCCTTCATTGAGCGCCTGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
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| CDS GCA 72 bp | TCGGCCACGCTCCTCCTCACTGAGCTGTCGCTGTGTTaGCGACAGGGTGCCATCCTGCTGGTTCCAGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SATLLLTELSLC*RQGAILLVPEQ Trigger: CTGCTCTGGAACCAGCAGGATGGCACCCTGTCGGCAACACAGCGACAGCTCAGTGAGGAGGAGCGTGGCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
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| CDS GCA 72 bp | GCCACATCCACGTGCAAGGTCAGCTGGTCCGAAAGGTaGGACTCCACCAGGGAGCACGCTGGGACGAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: ATSTCKVSWSER*DSTREHAGTKE Trigger: TTCCTTCGTCCCAGCGTGCTCCCTGGTGGAGTCGCACCTTTCGGACCAGCTGACCTTGCACGTGGATGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
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| CDS CCA 72 bp | ACCACGTTGCCAGCCACATCCACGTGCAAGGTCAGCTaGTCCGAAAGGTGCGACTCCACCAGGGAGCACGCT | + |
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Preference number: 6 (lower is better) Translates to: TTLPATSTCKVS*SERCDSTREHA Trigger: AGCGTGCTCCCTGGTGGAGTCGCACCTTTCGGACCAGCTGACCTTGCACGTGGATGTGGCTGGCAACGTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
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| CDS GCA 72 bp | CTGAGCTGTCGCTGTGTTGCCGACAGGGTGCCATCCTaGTGGTTCCAGAGCAGCAAGCCTCGCTTCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LSCRCVADRVPS*WFQSSKPRFWK Trigger: CTTCCAGAAGCGAGGCTTGCTGCTCTGGAACCAGCAGGATGGCACCCTGTCGGCAACACAGCGACAGCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
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| CDS CCA 72 bp | AGCTGTCGCTGTGTTGCCGACAGGGTGCCATCCTGCTaGTTCCAGAGCAGCAAGCCTCGCTTCTGGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SCRCVADRVPSC*FQSSKPRFWKL Trigger: CAACTTCCAGAAGCGAGGCTTGCTGCTCTGGAACCAGCAGGATGGCACCCTGTCGGCAACACAGCGACAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
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| CDS TCA 72 bp | TCGCTTCTGGAAGTTGGCTCCATCACCGAGCTCAAATaGATGCTCCAGCAGCAAAGCCACGGTGCCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: SLLEVGSITELK*MLQQQSHGATA Trigger: GGCTGTGGCACCGTGGCTTTGCTGCTGGAGCATTCATTTGAGCTCGGTGATGGAGCCAACTTCCAGAAGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
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| CDS CCA 72 bp | GCTGGTTCCAGAGCAGCAAGCCTCGCTTCTGGAAGTTaGCTCCATCACCGAGCTCAAATGAATGCTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: AGSRAASLASGS*LHHRAQMNAPA Trigger: TGCTGGAGCATTCATTTGAGCTCGGTGATGGAGCCAACTTCCAGAAGCGAGGCTTGCTGCTCTGGAACCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
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| CDS CCA 72 bp | CCATCCTGCTGGTTCCAGAGCAGCAAGCCTCGCTTCTaGAAGTTGGCTCCATCACCGAGCTCAAATGAATGC | + |
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Preference number: 6 (lower is better) Translates to: PSCWFQSSKPRF*KLAPSPSSNEC Trigger: GCATTCATTTGAGCTCGGTGATGGAGCCAACTTCCAGAAGCGAGGCTTGCTGCTCTGGAACCAGCAGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
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| CDS CAA 72 bp | TGCTGGTTCCAGAGCAGCAAGCCTCGCTTCTGGAAGTaGGCTCCATCACCGAGCTCAAATGAATGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CWFQSSKPRFWK*APSPSSNECSS Trigger: GCTGGAGCATTCATTTGAGCTCGGTGATGGAGCCAACTTCCAGAAGCGAGGCTTGCTGCTCTGGAACCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000118515.9 ENSMUST00000118808.9 ENSMUST00000138328.3 ENSMUST00000239015.2 |
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| CDS CCA 72 bp | GTCCGGCGCTCCCGACATCATGAGGAACAGCACAACTaGAATGATGTACATCCAGTATTTGGCAAAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: VRRSRHHEEQHN*NDVHPVFGKER Trigger: TCTTTCTTTGCCAAATACTGGATGTACATCATTCCAGTTGTGCTGTTCCTCATGATGTCGGGAGCGCCGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118808.9 ENSMUST00000239015.2 |
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