Pregenerated sensors for ELP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018565Ensembl transcript IDs: ENSMUST00000108594.8, ENSMUST00000108595.9, ENSMUST00000127437.8, ENSMUST00000142788.8, ENSMUST00000147437.3
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCAAGTCTGGTAAGTTGCACGTTGTTGGGGCCTTCGACAGAGGATaGAGGCTGAGGTCTGGTCCACTTTACCACTCAGAGTCACCTCTG | + |
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Preference number: 1 (lower is better) Translates to: TKSGKLHVVGAFDRG*RLRSGPLYHSESPL Trigger: CAGAGGTGACTCTGAGTGGTAAAGTGGACCAGACCTCAGCCTCCATCCTCTGTCGAAGGCCCCAACAACGTGCAACTTACCAGACTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127437.8 ENSMUST00000142788.8 |
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| 3UTR GCA 90 bp | GCTTCTGCAGACAAAGTAACAAAGGACAAGGGACAAGGTAGAGTCTaGCAACAGCAGGGTGGTTCTGAGCCCACAGCCTTCCTCTGCCAT | + |
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Preference number: 1 (lower is better) Translates to: ASADKVTKDKGQGRV*QQQGGSEPTAFLCH Trigger: ATGGCAGAGGAAGGCTGTGGGCTCAGAACCACCCTGCTGTTGGCAGACTCTACCTTGTCCCTTGTCCTTTGTTACTTTGTCTGCAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108594.8 ENSMUST00000142788.8 |
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| 3UTR GCA 90 bp | AAATCCGTTTGCCTCTACCTCCCGAGTGCTGGGATTAAAGGTGTGTaGCACCACTGCCCAGCTAATATCTCTAGTTTCTATTTTTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: KSVCLYLPSAGIKGV*HHCPANISSFYFSF Trigger: GAAGGAAAAATAGAAACTAGAGATATTAGCTGGGCAGTGGTGGCACACACCTTTAATCCCAGCACTCGGGAGGTAGAGGCAAACGGATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127437.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCATCTGGCTCATAGAAGATGTGGCCAGTGGTCCGGCTGGGTACCGGATGCAACAGAGGATGGAGGCTaGGGTCTGGTCCACTTTACC | + |
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Preference number: 2 (lower is better) Translates to: KHLAHRRCGQWSGWVPDATEDGG*GLVHFT Trigger: GGTAAAGTGGACCAGACCTCAGCCTCCATCCTCTGT...TGCATCCGGTACCCAGCCGGACCACTGGCCACATCTTCTATGAGCCAGATGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142788.8 |
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| 3UTR-3UTR GCA 90 bp | TTCGACAGAGGATGGAGGCTGAGGTCTGGTCCACTTTACCACTCAGAGTCACCTAGCAAGGGTGTTCAGTaGTCCCATGGAGCCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: FDRGWRLRSGPLYHSESPSKGVQ*SHGAWA Trigger: GGCCCAGGCTCCATGGGAGCACTGAACACCCTTGCT...AGGTGACTCTGAGTGGTAAAGTGGACCAGACCTCAGCCTCCATCCTCTGTCGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127437.8 ENSMUST00000142788.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTGTAGCTCAGAACGGAGGGGAAGCCCTTCATGGAGAGTCAGGCTGAAGTCATGTTCAGTGCTCCCATaGAGCCTGGGCCATGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: GCSSERRGSPSWRVRLKSCSVLP*SLGHEA Trigger: AGCTTCATGGCCCAGGCTCCATGGGAGCACTGAACA...TGACTTCAGCCTGACTCTCCATGAAGGGCTTCCCCTCCGTTCTGAGCTACACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127437.8 ENSMUST00000142788.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTGTAGCTCAGAACGGAGGGGAAGCCCTTCATGGAGAGTCAGGCTGAAGTCAACACTCATCCTAGCTTaGTGCTGCTCCTTGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GCSSERRGSPSWRVRLKSTLILA*CCSLAH Trigger: GTGAGCCAAGGAGCAGCATCAAGCTAGGATGAGTGT...TGACTTCAGCCTGACTCTCCATGAAGGGCTTCCCCTCCGTTCTGAGCTACACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142788.8 |
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| 3UTR-3UTR TCA 90 bp | CACGACACAGCTTCTGCAGACAAAGTAACAAAGGACAAGGGACAAGGTAGAGTCACAGCAGGGTGGTTCTaGGCCCACAGCCTTCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: HDTASADKVTKDKGQGRVTAGWF*AHSLPL Trigger: CAGAGGAAGGCTGTGGGCTCAGAACCACCCTGCTGT...GACTCTACCTTGTCCCTTGTCCTTTGTTACTTTGTCTGCAGAAGCTGTGTCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108594.8 ENSMUST00000142788.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGTAGACCAGGTTGGCCTCGAACTCAGAAATCCGTTTGCCTCTACCTCCCGAACAGAGGATGGAGGCTaGGGTCTGGTCCACTTTACC | + |
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Preference number: 2 (lower is better) Translates to: FVDQVGLELRNPFASTSRTEDGG*GLVHFT Trigger: GGTAAAGTGGACCAGACCTCAGCCTCCATCCTCTGT...TCGGGAGGTAGAGGCAAACGGATTTCTGAGTTCGAGGCCAACCTGGTCTACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127437.8 |
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| 3UTR-3UTR TCA 90 bp | GGAACTCACTTTGTAGACCAGGTTGGCCTCGAACTCAGAAATCCGTTTGCCTCTATGGAGCCTGGGCCATaGAGCTCTTCATGTAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GTHFVDQVGLELRNPFASMEPGP*SSSCRR Trigger: CCTCCTACATGAAGAGCTTCATGGCCCAGGCTCCAT...AGAGGCAAACGGATTTCTGAGTTCGAGGCCAACCTGGTCTACAAAGTGAGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127437.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTAGACCAGGTTGGCCTCGAACTCAGAAATCCGTTTGCCTCTACCTCCCGATGGAGGCTGAGGTCTaGTCCACTTTACCACTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LCRPGWPRTQKSVCLYLPMEAEV*STLPLR Trigger: TCTGAGTGGTAAAGTGGACCAGACCTCAGCCTCCAT...CGGGAGGTAGAGGCAAACGGATTTCTGAGTTCGAGGCCAACCTGGTCTACAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127437.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCTGCCATTTGTCTGTCAAATATCTAGGTCATCATCTGGGTCTTCTGGGTTGCTCCCATGGAGCCTaGGCCATGAAGCTCTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: FLCHLSVKYLGHHLGLLGCSHGA*AMKLFM Trigger: CATGAAGAGCTTCATGGCCCAGGCTCCATGGGAGCA...ACCCAGAAGACCCAGATGATGACCTAGATATTTGACAGACAAATGGCAGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142788.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCTTCCTCTGCCATTTGTCTGTCAAATATCTAGGTCATCATCTGGGTCTTCTCGGCTGGGTACCGGATaGAGCAGAGCTTTCTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: SLPLPFVCQISRSSSGSSRLGTG*SRAFCF Trigger: AAAACAGAAAGCTCTGCTGCATCCGGTACCCAGCCG...AGAAGACCCAGATGATGACCTAGATATTTGACAGACAAATGGCAGAGGAAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142788.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTCCTCTGCCATTTGTCTGTCAAATATCTAGGTCATCATCTGGGTCTTCTAGGTTAAAGGTCAAATaGGCAGTGGGATCCACCTGG | + |
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Preference number: 2 (lower is better) Translates to: SLPLPFVCQISRSSSGSSRLKVK*AVGSTW Trigger: CCAGGTGGATCCCACTGCTCATTTGACCTTTAACCT...AGAAGACCCAGATGATGACCTAGATATTTGACAGACAAATGGCAGAGGAAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142788.8 |
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| 3UTR-3UTR CCA 90 bp | CACATATATATTTTATTAGAAATGGGCACACACTATGCCCTCATCACACTCATCTGTTCAGTGCTCCCATaGAGCCTGGGCCATGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: HIYILLEMGTHYALITLICSVLP*SLGHEA Trigger: AGCTTCATGGCCCAGGCTCCATGGGAGCACTGAACA...GATGAGTGTGATGAGGGCATAGTGTGTGCCCATTTCTAATAAAATATATATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142788.8 |
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| 3UTR CCA 72 bp | TCACCTCTGTGTGAGCAAGGGTGTTCAGTGCTCCCATaGAGCCTGGGCCATGAAGCTCTTCATGTAGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: SPLCEQGCSVLP*SLGHEALHVGG Trigger: GCCTCCTACATGAAGAGCTTCATGGCCCAGGCTCCATGGGAGCACTGAACACCCTTGCTCACACAGAGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127437.8 ENSMUST00000142788.8 |
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| 3UTR CCA 72 bp | GGTAAGTTGCACGTTGTTGGGGCCTTCGACAGAGGATaGAGGCTGAGGTCTGGTCCACTTTACCACTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GKLHVVGAFDRG*RLRSGPLYHSE Trigger: CTCTGAGTGGTAAAGTGGACCAGACCTCAGCCTCCATCCTCTGTCGAAGGCCCCAACAACGTGCAACTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127437.8 ENSMUST00000142788.8 |
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| 3UTR CCA 72 bp | CATCTGGCTCATAGAAGATGTGGCCAGTGGTCCGGCTaGGTACCGGATGCAGCAGAGCTTTCTGTTTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HLAHRRCGQWSG*VPDAAELSVFQ Trigger: CTGAAAAACAGAAAGCTCTGCTGCATCCGGTACCCAGCCGGACCACTGGCCACATCTTCTATGAGCCAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142788.8 |
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| 3UTR GCA 72 bp | GACAAAGTAACAAAGGACAAGGGACAAGGTAGAGTCTaGCAACAGCAGGGTGGTTCTGAGCCCACAGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: DKVTKDKGQGRV*QQQGGSEPTAF Trigger: GAAGGCTGTGGGCTCAGAACCACCCTGCTGTTGGCAGACTCTACCTTGTCCCTTGTCCTTTGTTACTTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108594.8 ENSMUST00000142788.8 |
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| 3UTR GCA 72 bp | TGTAGACCAGGTTGGCCTCGAACTCAGAAATCCGTTTaGCTCTACCTCCCGAGTGCTGGGATTAAAGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSV*LYLPSAGIKGV Trigger: CACACCTTTAATCCCAGCACTCGGGAGGTAGAGGCAAACGGATTTCTGAGTTCGAGGCCAACCTGGTCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127437.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCTCCTTGGCTCACGACACAGCTTCTGCAGACAAAGTAACAAAGGACAAGGGCACACTCATCCTAGCTaGATGCTGCTCCTTGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: LLLGSRHSFCRQSNKGQGHTHPS*MLLLGS Trigger: TGAGCCAAGGAGCAGCATCAAGCTAGGATGAGTGTG...CCCTTGTCCTTTGTTACTTTGTCTGCAGAAGCTGTGTCGTGAGCCAAGGAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108594.8 ENSMUST00000142788.8 |
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| 3UTR GCA 72 bp | TGCCTCTACCTCCCGAGTGCTGGGATTAAAGGTGTGTaGCACCACTGCCCAGCTAATATCTCTAGTTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: CLYLPSAGIKGV*HHCPANISSFY Trigger: ATAGAAACTAGAGATATTAGCTGGGCAGTGGTGGCACACACCTTTAATCCCAGCACTCGGGAGGTAGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127437.8 |
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| 3UTR GCA 72 bp | CAACAGCAGGGTGGTTCTGAGCCCACAGCCTTCCTCTaGCATTTGTCTGTCAAATATCTAGGTCATCATCTG | + |
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Preference number: 3 (lower is better) Translates to: QQQGGSEPTAFL*HLSVKYLGHHL Trigger: CAGATGATGACCTAGATATTTGACAGACAAATGGCAGAGGAAGGCTGTGGGCTCAGAACCACCCTGCTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142788.8 |
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| 3UTR GCA 72 bp | ACACATATATATTTTATTAGAAATGGGCACACACTATaGCCTCATCACACTCATCCTAGCTTGATGCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: THIYFIRNGHTL*PHHTHPSLMLL Trigger: GAGCAGCATCAAGCTAGGATGAGTGTGATGAGGGCATAGTGTGTGCCCATTTCTAATAAAATATATATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108594.8 ENSMUST00000142788.8 |
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| CDS-3UTR TCA 90 bp | GGTAGAGTCTGCCAACAGCAGGGTGGTTCTGAGCCCACAGCCTTCCTCTGCCATACAGAGGATGGAGGCTaGGGTCTGGTCCACTTTACC | + |
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Preference number: 4 (lower is better) Translates to: GRVCQQQGGSEPTAFLCHTEDGG*GLVHFT Trigger: GGTAAAGTGGACCAGACCTCAGCCTCCATCCTCTGT...ATGGCAGAGGAAGGCTGTGGGCTCAGAACCACCCTGCTGTTGGCAGACTCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR GCA 90 bp | GGACAAGGTAGAGTCTGCCAACAGCAGGGTGGTTCTGAGCCCACAGCCTTCCTCCGGCTGGGTACCGGATaGAGCAGAGCTTTCTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: GQGRVCQQQGGSEPTAFLRLGTG*SRAFCF Trigger: AAAACAGAAAGCTCTGCTGCATCCGGTACCCAGCCG...GAGGAAGGCTGTGGGCTCAGAACCACCCTGCTGTTGGCAGACTCTACCTTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR CCA 90 bp | GAGTCTGCCAACAGCAGGGTGGTTCTGAGCCCACAGCCTTCCTCTGCCATTTGTTGTTCAGTGCTCCCATaGAGCCTGGGCCATGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: ESANSRVVLSPQPSSAICCSVLP*SLGHEA Trigger: AGCTTCATGGCCCAGGCTCCATGGGAGCACTGAACA...ACAAATGGCAGAGGAAGGCTGTGGGCTCAGAACCACCCTGCTGTTGGCAGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR CCA 90 bp | GGTAGAGTCTGCCAACAGCAGGGTGGTTCTGAGCCCACAGCCTTCCTCTGCCATAGGGGAAGCCCTTCATaGAGAGTCAGGCTGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: GRVCQQQGGSEPTAFLCHRGSPS*RVRLKS Trigger: TGACTTCAGCCTGACTCTCCATGAAGGGCTTCCCCT...ATGGCAGAGGAAGGCTGTGGGCTCAGAACCACCCTGCTGTTGGCAGACTCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR CCA 90 bp | GGACAAGGTAGAGTCTGCCAACAGCAGGGTGGTTCTGAGCCCACAGCCTTCCTCAGGTCAAATGAGCAGTaGGATCCACCTGGGTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: GQGRVCQQQGGSEPTAFLRSNEQ*DPPGLC Trigger: ACACAACCCAGGTGGATCCCACTGCTCATTTGACCT...GAGGAAGGCTGTGGGCTCAGAACCACCCTGCTGTTGGCAGACTCTACCTTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| 3UTR CAA 72 bp | GGGCACACACTATGCCCTCATCACACTCATCCTAGCTaGATGCTGCTCCTTGGCTCACGACACAGCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: GHTLCPHHTHPS*MLLLGSRHSFC Trigger: GCAGAAGCTGTGTCGTGAGCCAAGGAGCAGCATCAAGCTAGGATGAGTGTGATGAGGGCATAGTGTGTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108594.8 ENSMUST00000142788.8 |
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| CDS-3UTR GCA 90 bp | TTGATGCTGCTCCTTGGCTCACGACACAGCTTCTGCAGACAAAGTAACAAAGGAAGCAAGGGTGTTCAGTaGTCCCATGGAGCCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LMLLLGSRHSFCRQSNKGSKGVQ*SHGAWA Trigger: GGCCCAGGCTCCATGGGAGCACTGAACACCCTTGCT...TCCTTTGTTACTTTGTCTGCAGAAGCTGTGTCGTGAGCCAAGGAGCAGCATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| 3UTR CAA 72 bp | CTTCTGCCAGACTCTAGGCTCACACCCTTGCCAATTTaGACACCTGGGTTGTGTGATGATCCGGGTGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: LLPDSRLTPLPI*TPGLCDDPGVA Trigger: AGCTACACCCGGATCATCACACAACCCAGGTGTCAAAATTGGCAAGGGTGTGAGCCTAGAGTCTGGCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127437.8 |
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| CDS-3UTR CCA 90 bp | TTGGCTCACGACACAGCTTCTGCAGACAAAGTAACAAAGGACAAGGGACAAGGTGCCTTCGACAGAGGATaGAGGCTGAGGTCTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LAHDTASADKVTKDKGQGAFDRG*RLRSGP Trigger: TGGACCAGACCTCAGCCTCCATCCTCTGTCGAAGGC...ACCTTGTCCCTTGTCCTTTGTTACTTTGTCTGCAGAAGCTGTGTCGTGAGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR TCA 90 bp | TTGATGCTGCTCCTTGGCTCACGACACAGCTTCTGCAGACAAAGTAACAAAGGAATGGAGCCTGGGCCATaGAGCTCTTCATGTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LMLLLGSRHSFCRQSNKGMEPGP*SSSCRR Trigger: CCTCCTACATGAAGAGCTTCATGGCCCAGGCTCCAT...TCCTTTGTTACTTTGTCTGCAGAAGCTGTGTCGTGAGCCAAGGAGCAGCATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR TCA 90 bp | CACGACACAGCTTCTGCAGACAAAGTAACAAAGGACAAGGGACAAGGTAGAGTCACTGGAAAGGCAGAGTaGGGCTGTCTCTGGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: HDTASADKVTKDKGQGRVTGKAE*GCLWLL Trigger: GAGAAGCCAGAGACAGCCTCACTCTGCCTTTCCAGT...GACTCTACCTTGTCCCTTGTCCTTTGTTACTTTGTCTGCAGAAGCTGTGTCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR CCA 90 bp | GACACAGCTTCTGCAGACAAAGTAACAAAGGACAAGGGACAAGGTAGAGTCTGCTGCTCCCATGGAGCCTaGGCCATGAAGCTCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: DTASADKVTKDKGQGRVCCSHGA*AMKLFM Trigger: CATGAAGAGCTTCATGGCCCAGGCTCCATGGGAGCA...GCAGACTCTACCTTGTCCCTTGTCCTTTGTTACTTTGTCTGCAGAAGCTGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR TCA 90 bp | TTGGCTCACGACACAGCTTCTGCAGACAAAGTAACAAAGGACAAGGGACAAGGTGTAACACAGGGAATGTaGCACAGCAGCCAGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LAHDTASADKVTKDKGQGVTQGM*HSSQLR Trigger: TCTCAGCTGGCTGCTGTGTCACATTCCCTGTGTTAC...ACCTTGTCCCTTGTCCTTTGTTACTTTGTCTGCAGAAGCTGTGTCGTGAGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR TCA 90 bp | TTGGCTCACGACACAGCTTCTGCAGACAAAGTAACAAAGGACAAGGGACAAGGTCATGGAGAGTCAGGCTaGAGTCAGGAAGAACGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LAHDTASADKVTKDKGQGHGESG*SQEERR Trigger: TCTCCGTTCTTCCTGACTTCAGCCTGACTCTCCATG...ACCTTGTCCCTTGTCCTTTGTTACTTTGTCTGCAGAAGCTGTGTCGTGAGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR TCA 90 bp | CTTGGCTCACGACACAGCTTCTGCAGACAAAGTAACAAAGGACAAGGGACAAGGAGGTTAAAGGTCAAATaGGCAGTGGGATCCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: LGSRHSFCRQSNKGQGTRRLKVK*AVGSTW Trigger: CCAGGTGGATCCCACTGCTCATTTGACCTTTAACCT...CCTTGTCCCTTGTCCTTTGTTACTTTGTCTGCAGAAGCTGTGTCGTGAGCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR GCA 90 bp | GAGAGTCAGGCTGAAGTCAGGAAGAACGGAGAACCACCAAGTCTGGTAAGTTGCCTGCTCCCCACGAAGTaGAGATTTCTTGATAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ESQAEVRKNGEPPSLVSCLLPTK*RFLDKS Trigger: GCTCTTATCAAGAAATCTGCACTTCGTGGGGAGCAG...GCAACTTACCAGACTTGGTGGTTCTCCGTTCTTCCTGACTTCAGCCTGACTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127437.8 ENSMUST00000142788.8 |
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| CDS-3UTR GCA 90 bp | GCTTCTGCAGACAAAGTAACAAAGGACAAGGGACAAGGTAGAGTCTGCCAACAGCCTGGGTCTCCATTTTaGTGGCTCAGAGCATGTAGG | + |
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Preference number: 4 (lower is better) Translates to: ASADKVTKDKGQGRVCQQPGSPF*WLRACR Trigger: CCTACATGCTCTGAGCCAGCAAAATGGAGACCCAGG...CTGTTGGCAGACTCTACCTTGTCCCTTGTCCTTTGTTACTTTGTCTGCAGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR TCA 90 bp | CACGACACAGCTTCTGCAGACAAAGTAACAAAGGACAAGGGACAAGGTAGAGTCAGCTTCTCCAGGCTTTaGCCAGTTAAGAGGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: HDTASADKVTKDKGQGRVSFSRL*PVKRVS Trigger: AGAGACCCTCTTAACTGGTCAAAGCCTGGAGAAGCT...GACTCTACCTTGTCCCTTGTCCTTTGTTACTTTGTCTGCAGAAGCTGTGTCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR CCA 90 bp | TTGATGCTGCTCCTTGGCTCACGACACAGCTTCTGCAGACAAAGTAACAAAGGAATGGAGGCTGAGGTCTaGTCCACTTTACCACTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LMLLLGSRHSFCRQSNKGMEAEV*STLPLR Trigger: TCTGAGTGGTAAAGTGGACCAGACCTCAGCCTCCAT...TCCTTTGTTACTTTGTCTGCAGAAGCTGTGTCGTGAGCCAAGGAGCAGCATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| 3UTR CAA 72 bp | CTATTTTTCCTTCTGCCAGACTCTAGGCTCACACCCTaGCCAATTTTGACACCTGGGTTGTGTGATGATCCG | + |
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Preference number: 4 (lower is better) Translates to: LFFLLPDSRLTP*PILTPGLCDDP Trigger: CGGATCATCACACAACCCAGGTGTCAAAATTGGCAAGGGTGTGAGCCTAGAGTCTGGCAGAAGGAAAAATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127437.8 |
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| CDS-3UTR GCA 90 bp | CACGACACAGCTTCTGCAGACAAAGTAACAAAGGACAAGGGACAAGGTAGAGTCCTGCTCCCCACGAAGTaGAGATTTCTTGATAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: HDTASADKVTKDKGQGRVLLPTK*RFLDKS Trigger: GCTCTTATCAAGAAATCTGCACTTCGTGGGGAGCAG...GACTCTACCTTGTCCCTTGTCCTTTGTTACTTTGTCTGCAGAAGCTGTGTCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108594.8 ENSMUST00000142788.8 |
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| CDS-3UTR GCA 90 bp | TTGGCTCACGACACAGCTTCTGCAGACAAAGTAACAAAGGACAAGGGACAAGGTCATGGTCTGTCCTTTTaGACATGGACCTCAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LAHDTASADKVTKDKGQGHGLSF*TWTSRL Trigger: AAGCCTTGAGGTCCATGTGCAAAAGGACAGACCATG...ACCTTGTCCCTTGTCCTTTGTTACTTTGTCTGCAGAAGCTGTGTCGTGAGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR CCA 90 bp | TTGGCTCACGACACAGCTTCTGCAGACAAAGTAACAAAGGACAAGGGACAAGGTTTTTCAGAGCTGAACTaGAAAGGCAGAGTGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LAHDTASADKVTKDKGQGFSELN*KGRVRL Trigger: CAGCCTCACTCTGCCTTTCCAGTTCAGCTCTGAAAA...ACCTTGTCCCTTGTCCTTTGTTACTTTGTCTGCAGAAGCTGTGTCGTGAGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR CCA 90 bp | TCTGCAGACAAAGTAACAAAGGACAAGGGACAAGGTAGAGTCTGCCAACAGCAGCTGTCCTTTTGCACATaGACCTCAAGGCTTTTAGAG | + |
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Preference number: 4 (lower is better) Translates to: SADKVTKDKGQGRVCQQQLSFCT*TSRLLE Trigger: CTCTAAAAGCCTTGAGGTCCATGTGCAAAAGGACAG...CTGCTGTTGGCAGACTCTACCTTGTCCCTTGTCCTTTGTTACTTTGTCTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR GCA 90 bp | TTCCTCTGCCATTTGTCTGTCAAATATCTAGGTCATCATCTGGGTCTTCTGGGTCTGCTCCCCACGAAGTaGAGATTTCTTGATAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: FLCHLSVKYLGHHLGLLGLLPTK*RFLDKS Trigger: GCTCTTATCAAGAAATCTGCACTTCGTGGGGAGCAG...ACCCAGAAGACCCAGATGATGACCTAGATATTTGACAGACAAATGGCAGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142788.8 |
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| CDS-3UTR TCA 90 bp | ACACATATATATTTTATTAGAAATGGGCACACACTATGCCCTCATCACACTCATGACACAGCAGCCAGCTaGGAGAGTCAAGGGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: THIYFIRNGHTLCPHHTHDTAAS*ESQGQW Trigger: CCATTGCCCTTGACTCTCTCAGCTGGCTGCTGTGTC...ATGAGTGTGATGAGGGCATAGTGTGTGCCCATTTCTAATAAAATATATATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR CCA 90 bp | ACACATATATATTTTATTAGAAATGGGCACACACTATGCCCTCATCACACTCATAGAAGATGTGGCCAGTaGTCCGGCTGGGTACCGGAT | + |
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Preference number: 4 (lower is better) Translates to: THIYFIRNGHTLCPHHTHRRCGQ*SGWVPD Trigger: ATCCGGTACCCAGCCGGACCACTGGCCACATCTTCT...ATGAGTGTGATGAGGGCATAGTGTGTGCCCATTTCTAATAAAATATATATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS CCA 90 bp | CACAGCAGCCAGCTGAGAGAGTCAAGGGCAATGGTGACTGAGCCATaGTCTGTCCTTTTGCACATGGACCTCAAGGCTTTTAGAGGACCT | + |
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Preference number: 5 (lower is better) Translates to: HSSQLRESRAMVTEP*SVLLHMDLKAFRGP Trigger: AGGTCCTCTAAAAGCCTTGAGGTCCATGTGCAAAAGGACAGACCATGGCTCAGTCACCATTGCCCTTGACTCTCTCAGCTGGCTGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108594.8 ENSMUST00000108595.9 ENSMUST00000147437.3 |
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| CDS-3UTR CAA 90 bp | GTGAGCAAGGGTGTTCAGTGCTCCCATGGAGCCTGGGCCATGAAGCTCTTCATGCGAAGTGCAGATTTCTaGATAAGAGCCTTCAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: VSKGVQCSHGAWAMKLFMRSADF*IRAFRR Trigger: TCTCCTGAAGGCTCTTATCAAGAAATCTGCACTTCG...CATGAAGAGCTTCATGGCCCAGGCTCCATGGGAGCACTGAACACCCTTGCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127437.8 ENSMUST00000142788.8 |
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| CDS-3UTR CAA 90 bp | GGGTGTAGCTCAGAACGGAGGGGAAGCCCTTCATGGAGAGTCAGGCTGAAGTCACGAAGTGCAGATTTCTaGATAAGAGCCTTCAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: GCSSERRGSPSWRVRLKSRSADF*IRAFRR Trigger: TCTCCTGAAGGCTCTTATCAAGAAATCTGCACTTCG...TGACTTCAGCCTGACTCTCCATGAAGGGCTTCCCCTCCGTTCTGAGCTACACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127437.8 ENSMUST00000142788.8 |
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| CDS-3UTR CAA 90 bp | TTGATGCTGCTCCTTGGCTCACGACACAGCTTCTGCAGACAAAGTAACAAAGGATGGGATCCACCTGGGTaGTGTGATGATCCGGGTGTA | + |
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Preference number: 5 (lower is better) Translates to: LMLLLGSRHSFCRQSNKGWDPPG*CDDPGV Trigger: TACACCCGGATCATCACACAACCCAGGTGGATCCCA...TCCTTTGTTACTTTGTCTGCAGAAGCTGTGTCGTGAGCCAAGGAGCAGCATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR CAA 90 bp | TCTGCAGACAAAGTAACAAAGGACAAGGGACAAGGTAGAGTCTGCCAACAGCAGCCATGGTCTGTCCTTTaGCACATGGACCTCAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: SADKVTKDKGQGRVCQQQPWSVL*HMDLKA Trigger: AGCCTTGAGGTCCATGTGCAAAAGGACAGACCATGG...CTGCTGTTGGCAGACTCTACCTTGTCCCTTGTCCTTTGTTACTTTGTCTGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108594.8 |
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| CDS-3UTR CAA 90 bp | CACATATATATTTTATTAGAAATGGGCACACACTATGCCCTCATCACACTCATCCGAAGTGCAGATTTCTaGATAAGAGCCTTCAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: HIYILLEMGTHYALITLIRSADF*IRAFRR Trigger: TCTCCTGAAGGCTCTTATCAAGAAATCTGCACTTCG...GATGAGTGTGATGAGGGCATAGTGTGTGCCCATTTCTAATAAAATATATATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108594.8 ENSMUST00000142788.8 |
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| CDS TCA 72 bp | CAGCAGCCAGCTGAGAGAGTCAAGGGCAATGGTGACTaGGCCATGGTCTGTCCTTTTGCACATGGACCTCAA | + |
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Preference number: 6 (lower is better) Translates to: QQPAERVKGNGD*AMVCPFAHGPQ Trigger: TTGAGGTCCATGTGCAAAAGGACAGACCATGGCTCAGTCACCATTGCCCTTGACTCTCTCAGCTGGCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108594.8 ENSMUST00000108595.9 ENSMUST00000147437.3 |
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| CDS CAA 72 bp | AGAACGTGGACCTGCTCCCCACGAAGTGCAGATTTCTaGATAAGAGCCTTCAGGAGACTACGCCCTTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: RTWTCSPRSADF*IRAFRRLRPSH Trigger: GTGGGAAGGGCGTAGTCTCCTGAAGGCTCTTATCAAGAAATCTGCACTTCGTGGGGAGCAGGTCCACGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000108594.8 ENSMUST00000108595.9 ENSMUST00000127437.8 ENSMUST00000142788.8 ENSMUST00000147437.3 |
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| CDS GCA 72 bp | TCTTCTTCGCTCACTTCACAGCCCAGAACGTGGACCTaGTCCCCACGAAGTGCAGATTTCTTGATAAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSLTSQPRTWT*SPRSADFLIRA Trigger: GGCTCTTATCAAGAAATCTGCACTTCGTGGGGAGCAGGTCCACGTTCTGGGCTGTGAAGTGAGCGAAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000108594.8 ENSMUST00000108595.9 ENSMUST00000127437.8 ENSMUST00000142788.8 ENSMUST00000147437.3 |
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| CDS CCA 72 bp | CGAAACTCTTCTTCGCTCACTTCACAGCCCAGAACGTaGACCTGCTCCCCACGAAGTGCAGATTTCTTGATA | + |
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Preference number: 6 (lower is better) Translates to: RNSSSLTSQPRT*TCSPRSADFLI Trigger: TATCAAGAAATCTGCACTTCGTGGGGAGCAGGTCCACGTTCTGGGCTGTGAAGTGAGCGAAGAAGAGTTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000108594.8 ENSMUST00000108595.9 ENSMUST00000127437.8 ENSMUST00000142788.8 ENSMUST00000147437.3 |
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| CDS CAA 72 bp | TCAAGGGCAATGGTGACTGAGCCATGGTCTGTCCTTTaGCACATGGACCTCAAGGCTTTTAGAGGACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SRAMVTEPWSVL*HMDLKAFRGPS Trigger: TGAAGGTCCTCTAAAAGCCTTGAGGTCCATGTGCAAAAGGACAGACCATGGCTCAGTCACCATTGCCCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108594.8 ENSMUST00000108595.9 ENSMUST00000147437.3 |
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