Pregenerated sensors for ELP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028431Ensembl transcript IDs: ENSMUST00000030140.3
Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TGTTTGGGGGACAGAGTAACAACCAACCCTGCTCCCACATATGCCTaGTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCT | + |
Preference number: 1 (lower is better) Translates to: CLGDRVTTNPAPTYA*CLPITEVHPTLGNS Trigger: AGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGCAGGGTTGGTTGTTACTCTGTCCCCCAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR TCA 90 bp | CTAAGATGTATACCCAAAAGAAAGTGGGGACTGCCTAGTGCTAGCTaGGGCTGTTCAAAGGCAGACTCTTCCACATCCCAGTTCTCCACA | + |
Preference number: 1 (lower is better) Translates to: LRCIPKRKWGLPSAS*GCSKADSSTSQFST Trigger: TGTGGAGAACTGGGATGTGGAAGAGTCTGCCTTTGAACAGCCTCAGCTAGCACTAGGCAGTCCCCACTTTCTTTTGGGTATACATCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR TCA 90 bp | TGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTaGAATCCGAAGAGGACGTTAGATCGTCTAGAACTGGAGAAAACA | + |
Preference number: 1 (lower is better) Translates to: CLHICLCTTCLPGAQ*NPKRTLDRLELEKT Trigger: TGTTTTCTCCAGTTCTAGACGATCTAACGTCCTCTTCGGATTTCACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR GCA 90 bp | ATTATTGTCATGGCAGGAAGCATGGCAGCCTGCAGGCAGAAACAGTaGTGTACAAGGCAAGAGTTCTATCTTGATCAGAAGTTAGCAGCA | + |
Preference number: 1 (lower is better) Translates to: IIVMAGSMAACRQKQ*CTRQEFYLDQKLAA Trigger: TGCTGCTAACTTCTGATCAAGATAGAACTCTTGCCTTGTACAGCACTGTTTCTGCCTGCAGGCTGCCATGCTTCCTGCCATGACAATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR GCA 90 bp | GAGCTGTCCAAGGTTGTAACAGAAACGAGACTCCAGTTCATGATCTaGCTAACCATGCTTTCAAACAGTACTGAGTACAAGAACAGCAGG | + |
Preference number: 1 (lower is better) Translates to: ELSKVVTETRLQFMI*LTMLSNSTEYKNSR Trigger: CCTGCTGTTCTTGTACTCAGTACTGTTTGAAAGCATGGTTAGGCAGATCATGAACTGGAGTCTCGTTTCTGTTACAACCTTGGACAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR CCA 90 bp | GGGTTTCATTGCTATGAAGAGACACCAAGACCATACCAACTATCATaGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTA | + |
Preference number: 1 (lower is better) Translates to: GFHCYEETPRPYQLS*RNISLGLAYSLRGL Trigger: TAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGTGTCTCTTCATAGCAATGAAACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR GCA 90 bp | TTTACCACTGAGTCAATTCTCCAGTCCCCAAACAGCTTTTTATTCTaGTTTGAGTTAATGCACAGATGCCAGCTATGCAATCACATCTTA | + |
Preference number: 1 (lower is better) Translates to: FTTESILQSPNSFLF*FELMHRCQLCNHIL Trigger: TAAGATGTGATTGCATAGCTGGCATCTGTGCATTAACTCAAAGCAGAATAAAAAGCTGTTTGGGGACTGGAGAATTGACTCAGTGGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR GCA 90 bp | TTGGAAACAATGAAACATGGGTCAGTCAATGTCTTAGGGTTTCATTaGTATGAAGAGACACCAAGACCATACCAACTATCATGGAGAAAC | + |
Preference number: 1 (lower is better) Translates to: LETMKHGSVNVLGFH*YEETPRPYQLSWRN Trigger: GTTTCTCCATGATAGTTGGTATGGTCTTGGTGTCTCTTCATAGCAATGAAACCCTAAGACATTGACTGACCCATGTTTCATTGTTTCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR TCA 90 bp | AACAATGAAACATGGGTCAGTCAATGTCTTAGGGTTTCATTGCTATaGAGAGACACCAAGACCATACCAACTATCATGGAGAAACATTTC | + |
Preference number: 1 (lower is better) Translates to: NNETWVSQCLRVSLL*RDTKTIPTIMEKHF Trigger: GAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGTGTCTCTTCATAGCAATGAAACCCTAAGACATTGACTGACCCATGTTTCATTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR-3UTR GCA 90 bp | GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGCCCAGCTTCCTGGGCTaGTGGGATTATAGGCATGTC | + |
Preference number: 2 (lower is better) Translates to: DIYTNKATPNSATAHGPRPSFLG*WDYRHV Trigger: GACATGCCTATAATCCCAGCAGCCCAGGAAGCTGGG...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR-3UTR GCA 90 bp | GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGCCCTGCTCCCACATATaGCTGCTGTCTACCCATCAC | + |
Preference number: 2 (lower is better) Translates to: DIYTNKATPNSATAHGPRPCSHI*LLSTHH Trigger: GTGATGGGTAGACAGCAGGCATATGTGGGAGCAGGG...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR-3UTR TCA 90 bp | GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGGCTTTCAAACAGTACTaGGTACAAGAACAGCAGGAT | + |
Preference number: 2 (lower is better) Translates to: DIYTNKATPNSATAHGPRAFKQY*VQEQQD Trigger: ATCCTGCTGTTCTTGTACTCAGTACTGTTTGAAAGC...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR-3UTR TCA 90 bp | GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGAAACATCATTCCCTATaGACAACAGGAACTGAGGAT | + |
Preference number: 2 (lower is better) Translates to: DIYTNKATPNSATAHGPRKHHSL*TTGTED Trigger: ATCCTCAGTTCCTGTTGTTCATAGGGAATGATGTTT...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR-3UTR CCA 90 bp | AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGTCTGCCCCAGCTTCCTaGGCTGCTGGGATTATAGGC | + |
Preference number: 2 (lower is better) Translates to: SILPAHMFVYHMLAWCSVSAPAS*AAGIIG Trigger: GCCTATAATCCCAGCAGCCCAGGAAGCTGGGGCAGA...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR-3UTR TCA 90 bp | TCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTGAGTCTGCCCTGCCTAGTGCTAGCTaGGGCTGTTCAAAGGCAGAC | + |
Preference number: 2 (lower is better) Translates to: SPHLMSYKKPYTKPSESALPSAS*GCSKAD Trigger: GTCTGCCTTTGAACAGCCTCAGCTAGCACTAGGCAG...GGCAGACTCACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR-3UTR TCA 90 bp | TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATACCGCTCTTTACCACTaGGTCAATTCTCCAGTCCCC | + |
Preference number: 2 (lower is better) Translates to: CLPITEVHPTLGNSLAEHTALYH*VNSPVP Trigger: GGGGACTGGAGAATTGACTCAGTGGTAAAGAGCGGT...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR-3UTR TCA 90 bp | TCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTAGTCCATCAGGATGGGTTGTTTTaGGATAAGGCCATGCTGGTC | + |
Preference number: 2 (lower is better) Translates to: SWRNISLGLAYSLRGLVHQDGLF*DKAMLV Trigger: GACCAGCATGGCCTTATCTCAAAACAACCCATCCTG...ATGGACTAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR-3UTR GCA 90 bp | ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGGCTCCCACATATGCCTaGTGTCTACCCATCACTGAA | + |
Preference number: 2 (lower is better) Translates to: TKTIPTIMEKHFFGAGLQAPTYA*CLPITE Trigger: TTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR-3UTR TCA 90 bp | GGAAGCATGGCAGCCTGCAGGCAGAAACAGTGCTGTACAAGGCAAGAGTTCTATCTTTTTATTCTGCTTTaGGTTAATGCACAGATGCCA | + |
Preference number: 2 (lower is better) Translates to: GSMAACRQKQCCTRQEFYLFILL*VNAQMP Trigger: TGGCATCTGTGCATTAACTCAAAGCAGAATAAAAAG...ATAGAACTCTTGCCTTGTACAGCACTGTTTCTGCCTGCAGGCTGCCATGCTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR-3UTR CCA 90 bp | ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGATACCCAAAAGAAAGTaGGGACTGCCTAGTGCTAGC | + |
Preference number: 2 (lower is better) Translates to: TKTIPTIMEKHFFGAGLQIPKRK*GLPSAS Trigger: GCTAGCACTAGGCAGTCCCCACTTTCTTTTGGGTAT...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR-3UTR TCA 90 bp | AAGATCTCAAAGCACACCTCCACAGTGACAGACTTCCTCCAACAAGGACATCTACTTGTCTTCACTTTTTaGGGTAGAAACCATGAAACA | + |
Preference number: 2 (lower is better) Translates to: KISKHTSTVTDFLQQGHLLVFTF*GRNHET Trigger: TGTTTCATGGTTTCTACCTCAAAAAGTGAAGACAAG...TAGATGTCCTTGTTGGAGGAAGTCTGTCACTGTGGAGGTGTGCTTTGAGATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR CAA 90 bp | TGCACTATGTTAACAACACAGAGCAACTTAGAAACGTGGTTCCACTaGTCTTCACTTTTTGAGGTAGAAACCATGAAACATCATTCCCTA | + |
Preference number: 2 (lower is better) Translates to: CTMLTTQSNLETWFH*SSLFEVETMKHHSL Trigger: TAGGGAATGATGTTTCATGGTTTCTACCTCAAAAAGTGAAGACAAGTGGAACCACGTTTCTAAGTTGCTCTGTGTTGTTAACATAGTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR-3UTR GCA 90 bp | TATGTTAACAACACAGAGCAACTTAGAAACGTGGTTCCACTTGTCTTCACTTTTCTCCAGTTCATGATCTaGCTAACCATGCTTTCAAAC | + |
Preference number: 2 (lower is better) Translates to: YVNNTEQLRNVVPLVFTFLQFMI*LTMLSN Trigger: GTTTGAAAGCATGGTTAGGCAGATCATGAACTGGAG...AAAAGTGAAGACAAGTGGAACCACGTTTCTAAGTTGCTCTGTGTTGTTAACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR GCA 72 bp | GAGCTGCTATGTGGGTGCTGGGAAACCCAGGTCCACTaGAAAAGCAACAACCGCTCTTTACCACTGAGTCAA | + |
Preference number: 3 (lower is better) Translates to: ELLCGCWETQVH*KSNNRSLPLSQ Trigger: TTGACTCAGTGGTAAAGAGCGGTTGTTGCTTTTGCAGTGGACCTGGGTTTCCCAGCACCCACATAGCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR GCA 72 bp | CTGGAGAAAACAGACCGTTGTGAGCTGCTATGTGGGTaGTGGGAAACCCAGGTCCACTGCAAAAGCAACAAC | + |
Preference number: 3 (lower is better) Translates to: LEKTDRCELLCG*WETQVHCKSNN Trigger: GTTGTTGCTTTTGCAGTGGACCTGGGTTTCCCAGCACCCACATAGCAGCTCACAACGGTCTGTTTTCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR TCA 72 bp | ATACCCAAAAGAAAGTGGGGACTGCCTAGTGCTAGCTaGGGCTGTTCAAAGGCAGACTCTTCCACATCCCAG | + |
Preference number: 3 (lower is better) Translates to: IPKRKWGLPSAS*GCSKADSSTSQ Trigger: CTGGGATGTGGAAGAGTCTGCCTTTGAACAGCCTCAGCTAGCACTAGGCAGTCCCCACTTTCTTTTGGGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR TCA 72 bp | GTTAGATCGTCTAGAACTGGAGAAAACAGACCGTTGTaGGCTGCTATGTGGGTGCTGGGAAACCCAGGTCCA | + |
Preference number: 3 (lower is better) Translates to: VRSSRTGENRPL*AAMWVLGNPGP Trigger: TGGACCTGGGTTTCCCAGCACCCACATAGCAGCTCACAACGGTCTGTTTTCTCCAGTTCTAGACGATCTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR TCA 72 bp | AGGATGGGTTGTTTTGAGATAAGGCCATGCTGGTCTTaGACTTGCATCAGTCTTTCTGCCCCAGCTTCCTGG | + |
Preference number: 3 (lower is better) Translates to: RMGCFEIRPCWS*TCISLSAPASW Trigger: CCAGGAAGCTGGGGCAGAAAGACTGATGCAAGTTCAAGACCAGCATGGCCTTATCTCAAAACAACCCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR TCA 72 bp | ATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTaGAATCCGAAGAGGACGTTAGATCGTCTAGAACTG | + |
Preference number: 3 (lower is better) Translates to: ICLCTTCLPGAQ*NPKRTLDRLEL Trigger: CAGTTCTAGACGATCTAACGTCCTCTTCGGATTTCACTGAGCACCAGGCAAGCATGTGGTACACAAACATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR TCA 72 bp | GCAGAAACAGTGCTGTACAAGGCAAGAGTTCTATCTTaGTCAGAAGTTAGCAGCAGAGACTCTGCTACACTG | + |
Preference number: 3 (lower is better) Translates to: AETVLYKARVLS*SEVSSRDSATL Trigger: CAGTGTAGCAGAGTCTCTGCTGCTAACTTCTGATCAAGATAGAACTCTTGCCTTGTACAGCACTGTTTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR CCA 72 bp | TGCTATGAAGAGACACCAAGACCATACCAACTATCATaGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTC | + |
Preference number: 3 (lower is better) Translates to: CYEETPRPYQLS*RNISLGLAYSL Trigger: GAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGTGTCTCTTCATAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR TCA 72 bp | ACATGGGTCAGTCAATGTCTTAGGGTTTCATTGCTATaGAGAGACACCAAGACCATACCAACTATCATGGAG | + |
Preference number: 3 (lower is better) Translates to: TWVSQCLRVSLL*RDTKTIPTIME Trigger: CTCCATGATAGTTGGTATGGTCTTGGTGTCTCTTCATAGCAATGAAACCCTAAGACATTGACTGACCCATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR TCA 72 bp | TATACAGTTCCAAAATTGAGGAGGAAGCAGAGTTACTaGAAGACTGAACCAGCTAGGCAAACTCTAGACTCT | + |
Preference number: 3 (lower is better) Translates to: YTVPKLRRKQSY*KTEPARQTLDS Trigger: AGAGTCTAGAGTTTGCCTAGCTGGTTCAGTCTTTCAGTAACTCTGCTTCCTCCTCAATTTTGGAACTGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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3UTR GCA 72 bp | GAGTCAATTCTCCAGTCCCCAAACAGCTTTTTATTCTaGTTTGAGTTAATGCACAGATGCCAGCTATGCAAT | + |
Preference number: 3 (lower is better) Translates to: ESILQSPNSFLF*FELMHRCQLCN Trigger: ATTGCATAGCTGGCATCTGTGCATTAACTCAAAGCAGAATAAAAAGCTGTTTGGGGACTGGAGAATTGACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | TCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGGTTCTGGACCTGTGGTGCTTaGCTCCTGAGCGCTCGAACC | + |
Preference number: 4 (lower is better) Translates to: STPTRPRLIVPLPTGQGFWTCGA*LLSART Trigger: GGTTCGAGCGCTCAGGAGGCAAGCACCACAGGTCCA...GAACCCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGCGTCCCCAGAGGCGGTaGCCACACACACAGATTCCT | + |
Preference number: 4 (lower is better) Translates to: DIYTNKATPNSATAHGPRRPQRR*PHTQIP Trigger: AGGAATCTGTGTGTGTGGCCACCGCCTCTGGGGACG...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | GCTGGTCTTGAACTTGCATCAGTCTTTCTGCCCCAGCTTCCTGGGCTGCTGGGAGCTGGCTCGTACAGGTaGTCCTGCATCAGGTGCTCG | + |
Preference number: 4 (lower is better) Translates to: AGLELASVFLPQLPGLLGAGSYR*SCIRCS Trigger: CGAGCACCTGATGCAGGAGCACCTGTACGAGCCAGC...TCCCAGCAGCCCAGGAAGCTGGGGCAGAAAGACTGATGCAAGTTCAAGACCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | TCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGGTTCCACAGCCAGAGAAGGTaGCTCCCAAAGGTACTTGAG | + |
Preference number: 4 (lower is better) Translates to: STPTRPRLIVPLPTGQGFHSQRR*LPKVLE Trigger: CTCAAGTACCTTTGGGAGTCACCTTCTCTGGCTGTG...GAACCCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGTTGTCTTTGGACATCTaGAGCTGGGCAGCCACACAG | + |
Preference number: 4 (lower is better) Translates to: DIYTNKATPNSATAHGPRLSLDI*SWAATQ Trigger: CTGTGTGGCTGCCCAGCTTCAGATGTCCAAAGACAA...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGACATCCAGCTGGCCTTaGTCCTCATCCACCTCAGAA | + |
Preference number: 4 (lower is better) Translates to: DIYTNKATPNSATAHGPRTSSWP*SSSTSE Trigger: TTCTGAGGTGGATGAGGAGCAAGGCCAGCTGGATGT...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | GCTGGTCTTGAACTTGCATCAGTCTTTCTGCCCCAGCTTCCTGGGCTGCTGGGAACTGTTCCAGGACTGTaGCTGCCTCACTGTGCTTCC | + |
Preference number: 4 (lower is better) Translates to: AGLELASVFLPQLPGLLGTVPGL*LPHCAS Trigger: GGAAGCACAGTGAGGCAGCCACAGTCCTGGAACAGT...TCCCAGCAGCCCAGGAAGCTGGGGCAGAAAGACTGATGCAAGTTCAAGACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | GGAAGCATGGCAGCCTGCAGGCAGAAACAGTGCTGTACAAGGCAAGAGTTCTATGCCGGTAGGTACACATaGGAGGTGGGACGACCGTCT | + |
Preference number: 4 (lower is better) Translates to: GSMAACRQKQCCTRQEFYAGRYT*EVGRPS Trigger: AGACGGTCGTCCCACCTCCCATGTGTACCTACCGGC...ATAGAACTCTTGCCTTGTACAGCACTGTTTCTGCCTGCAGGCTGCCATGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | GCTGGTCTTGAACTTGCATCAGTCTTTCTGCCCCAGCTTCCTGGGCTGCTGGGAAGGTACTTGAGCACCTaGCCATCAGCCAGCTGTACT | + |
Preference number: 4 (lower is better) Translates to: AGLELASVFLPQLPGLLGRYLST*PSASCT Trigger: AGTACAGCTGGCTGATGGCCAGGTGCTCAAGTACCT...TCCCAGCAGCCCAGGAAGCTGGGGCAGAAAGACTGATGCAAGTTCAAGACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | GCTGGTCTTGAACTTGCATCAGTCTTTCTGCCCCAGCTTCCTGGGCTGCTGGGAGTGAATGATGGACTGTaGGCTGGAGTGACTGTAGCT | + |
Preference number: 4 (lower is better) Translates to: AGLELASVFLPQLPGLLGVNDGL*AGVTVA Trigger: AGCTACAGTCACTCCAGCTCACAGTCCATCATTCAC...TCCCAGCAGCCCAGGAAGCTGGGGCAGAAAGACTGATGCAAGTTCAAGACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | TCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGGTTCGTCACAGTCAAATGGTaGATGATGGACTGTGAGCTG | + |
Preference number: 4 (lower is better) Translates to: STPTRPRLIVPLPTGQGFVTVKW*MMDCEL Trigger: CAGCTCACAGTCCATCATTCACCATTTGACTGTGAC...GAACCCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | GCTGGTCTTGAACTTGCATCAGTCTTTCTGCCCCAGCTTCCTGGGCTGCTGGGATACTGTGGGAGTATCTaGCACTCATCTCACTGCCAC | + |
Preference number: 4 (lower is better) Translates to: AGLELASVFLPQLPGLLGYCGSI*HSSHCH Trigger: GTGGCAGTGAGATGAGTGGCAGATACTCCCACAGTA...TCCCAGCAGCCCAGGAAGCTGGGGCAGAAAGACTGATGCAAGTTCAAGACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTCTGCCTTCTGAGCCGTaGAACTGGGTCTGCTTACTG | + |
Preference number: 4 (lower is better) Translates to: APTYACCLPITEVHPTLGLPSEP*NWVCLL Trigger: CAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAG...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | TCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGGTTCTATGACTTGATTCACTaGATGTGGGATCAGCAGCCG | + |
Preference number: 4 (lower is better) Translates to: STPTRPRLIVPLPTGQGFYDLIH*MWDQQP Trigger: CGGCTGCTGATCCCACATCCAGTGAATCAAGTCATA...GAACCCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | GGAAGCATGGCAGCCTGCAGGCAGAAACAGTGCTGTACAAGGCAAGAGTTCTATGAACTGACATCCAGCTaGCCTTGCTCCTCATCCACC | + |
Preference number: 4 (lower is better) Translates to: GSMAACRQKQCCTRQEFYELTSS*PCSSST Trigger: GGTGGATGAGGAGCAAGGCCAGCTGGATGTCAGTTC...ATAGAACTCTTGCCTTGTACAGCACTGTTTCTGCCTGCAGGCTGCCATGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGTCTCCACTGGCCTCATaGCTGCCACTCAGAGCTGCC | + |
Preference number: 4 (lower is better) Translates to: SILPAHMFVYHMLAWCSVSPLAS*LPLRAA Trigger: GGCAGCTCTGAGTGGCAGTCATGAGGCCAGTGGAGA...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTGACTCACTGGTTGACTaGAAGGCAAACTCTCGGTTC | + |
Preference number: 4 (lower is better) Translates to: APTYACCLPITEVHPTLGDSLVD*KANSRF Trigger: GAACCGAGAGTTTGCCTTGCAGTCAACCAGTGAGTC...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTACACTGAGGTTTCCCTaGTGCCTGAATGTCCCGAAA | + |
Preference number: 4 (lower is better) Translates to: APTYACCLPITEVHPTLGTLRFP*CLNVPK Trigger: TTTCGGGACATTCAGGCACCAGGGAAACCTCAGTGT...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | GGAAGCATGGCAGCCTGCAGGCAGAAACAGTGCTGTACAAGGCAAGAGTTCTATAGGAGTCCAGATCTCTaGAACTGCCCTCTCCATCAG | + |
Preference number: 4 (lower is better) Translates to: GSMAACRQKQCCTRQEFYRSPDL*NCPLHQ Trigger: CTGATGGAGAGGGCAGTTCCAGAGATCTGGACTCCT...ATAGAACTCTTGCCTTGTACAGCACTGTTTCTGCCTGCAGGCTGCCATGCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGATCTGTGTGCATGGATaGACAAATCGAACAGGAATT | + |
Preference number: 4 (lower is better) Translates to: DIYTNKATPNSATAHGPRICVHG*TNRTGI Trigger: AATTCCTGTTCGATTTGTTCATCCATGCACACAGAT...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGCACATGGACCTGTGGTaGTTGCCTCCTGAGCGCTCG | + |
Preference number: 4 (lower is better) Translates to: LAALTAYMNTMHYVNNTEHMDLW*LPPERS Trigger: CGAGCGCTCAGGAGGCAAGCACCACAGGTCCATGTG...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGCAGGACTCCAGCTCATaGCAGAGATACCACTGGCCA | + |
Preference number: 4 (lower is better) Translates to: SILPAHMFVYHMLAWCSVQDSSS*QRYHWP Trigger: TGGCCAGTGGTATCTCTGTCATGAGCTGGAGTCCTG...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | TATTCAAAACACTATATTCCACTCCTGGCCCCCACAGGCTTGCAGCCATACATATGCAATCAAACTGCCTaGGGGTTTCCAAGCCAGGGC | + |
Preference number: 4 (lower is better) Translates to: YSKHYIPLLAPTGLQPYICNQTA*GFPSQG Trigger: GCCCTGGCTTGGAAACCCTCAGGCAGTTTGATTGCA...TATGTATGGCTGCAAGCCTGTGGGGGCCAGGAGTGGAATATAGTGTTTTGAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTGGTGAGCAGAGAATATaGCTTGATTCACTGGATGTG | + |
Preference number: 4 (lower is better) Translates to: APTYACCLPITEVHPTLGGEQRI*LDSLDV Trigger: CACATCCAGTGAATCAAGTCATATTCTCTGCTCACC...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATACTCCCAAAGGTACTTaGGCACCTGGCCATCAGCCA | + |
Preference number: 4 (lower is better) Translates to: CLPITEVHPTLGNSLAEHTPKGT*APGHQP Trigger: TGGCTGATGGCCAGGTGCTCAAGTACCTTTGGGAGT...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATCCGTGGAACTGGGTCTaGTTACTGCCCCATCCAACA | + |
Preference number: 4 (lower is better) Translates to: CLPITEVHPTLGNSLAEHPWNWV*LLPHPT Trigger: TGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGG...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | TCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTGAGTCTGCCCCAGATCTCTGGAACTaGCCTCTCCATCAGCTGCAG | + |
Preference number: 4 (lower is better) Translates to: SPHLMSYKKPYTKPSESAPDLWN*PLHQLQ Trigger: CTGCAGCTGATGGAGAGGGCAGTTCCAGAGATCTGG...GGCAGACTCACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGCAGAGCTCCGATCAGTaGTCCAGTGCCAGTCACAGC | + |
Preference number: 4 (lower is better) Translates to: TKTIPTIMEKHFFGAGLQQSSDQ*SSASHS Trigger: GCTGTGACTGGCACTGGACCACTGATCGGAGCTCTG...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGGCCATGCTGACCGCCTaGTACTGTGGTGAGTCTGGA | + |
Preference number: 4 (lower is better) Translates to: LAALTAYMNTMHYVNNTEAMLTA*YCGESG Trigger: TCCAGACTCACCACAGTACCAGGCGGTCAGCATGGC...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGAAACACCAGCCCTGCTaGCTCGTACAGGTGCTCCTG | + |
Preference number: 4 (lower is better) Translates to: LAALTAYMNTMHYVNNTEKHQPC*LVQVLL Trigger: CAGGAGCACCTGTACGAGCCAGCAGGGCTGGTGTTT...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | GACTCTGCATCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTTATTCGCAGTGGAGCTaGGACCTAGGACCGGTGTGG | + |
Preference number: 4 (lower is better) Translates to: DSASPHLMSYKKPYTKPSYSQWS*DLGPVW Trigger: CCACACCGGTCCTAGGTCCCAGCTCCACTGCGAATA...ACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGATGCAGAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | GGAAGCATGGCAGCCTGCAGGCAGAAACAGTGCTGTACAAGGCAAGAGTTCTATGCAGAGAATATGACTTaGTTCACTGGATGTGGGATC | + |
Preference number: 4 (lower is better) Translates to: GSMAACRQKQCCTRQEFYAENMT*FTGCGI Trigger: GATCCCACATCCAGTGAATCAAGTCATATTCTCTGC...ATAGAACTCTTGCCTTGTACAGCACTGTTTCTGCCTGCAGGCTGCCATGCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | TCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTGAGTCTGCCAACTGTCACGATCCGTaGACCCCTTTCCACTTTCCG | + |
Preference number: 4 (lower is better) Translates to: SPHLMSYKKPYTKPSESANCHDP*TPFHFP Trigger: CGGAAAGTGGAAAGGGGTTCACGGATCGTGACAGTT...GGCAGACTCACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGGAGGACTCCCTTCTTTaGGGCTATGCTTCTTGCGCT | + |
Preference number: 4 (lower is better) Translates to: SILPAHMFVYHMLAWCSVEDSLL*GYASCA Trigger: AGCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTC...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGGGGCTTGCTGCCAGCTaGCACAAGCCAAAAATGCTT | + |
Preference number: 4 (lower is better) Translates to: SILPAHMFVYHMLAWCSVGLAAS*HKPKML Trigger: AAGCATTTTTGGCTTGTGGCAGCTGGCAGCAAGCCC...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | TCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTAGTCCATCTCCACCAGCTTTCCTaGCAGAGTTCTAGCAAGGCC | + |
Preference number: 4 (lower is better) Translates to: SWRNISLGLAYSLRGLVHLHQLS*QSSSKA Trigger: GGCCTTGCTAGAACTCTGGCAGGAAAGCTGGTGGAG...ATGGACTAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | TATTCAAAACACTATATTCCACTCCTGGCCCCCACAGGCTTGCAGCCATACATAGCCCTCTCCATCAGCTaGAGAGTACTCTCAAAGGCT | + |
Preference number: 4 (lower is better) Translates to: YSKHYIPLLAPTGLQPYIALSIS*RVLSKA Trigger: AGCCTTTGAGAGTACTCTGCAGCTGATGGAGAGGGC...TATGTATGGCTGCAAGCCTGTGGGGGCCAGGAGTGGAATATAGTGTTTTGAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | TCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTGAGTCTGCCAGCAGAGACACGATCTaGTTCTTCCCAGTGGTGCTG | + |
Preference number: 4 (lower is better) Translates to: SPHLMSYKKPYTKPSESASRDTI*FFPVVL Trigger: CAGCACCACTGGGAAGAACCAGATCGTGTCTCTGCT...GGCAGACTCACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | GACTCTGCATCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTCACAGACTCACTGGTTaGCTGCAAGGCAAACTCTCG | + |
Preference number: 4 (lower is better) Translates to: DSASPHLMSYKKPYTKPSHRLTG*LQGKLS Trigger: CGAGAGTTTGCCTTGCAGTCAACCAGTGAGTCTGTG...ACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGATGCAGAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | GACTCTGCATCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTCTGAGGTTTCCCTGGTaGCTGAATGTCCCGAAACTC | + |
Preference number: 4 (lower is better) Translates to: DSASPHLMSYKKPYTKPSLRFPW*LNVPKL Trigger: GAGTTTCGGGACATTCAGGCACCAGGGAAACCTCAG...ACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGATGCAGAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | AAGATCTCAAAGCACACCTCCACAGTGACAGACTTCCTCCAACAAGGACATCTACCTGAATACCCACAATaGAGCCACTTCCATCCTCTG | + |
Preference number: 4 (lower is better) Translates to: KISKHTSTVTDFLQQGHLPEYPQ*SHFHPL Trigger: CAGAGGATGGAAGTGGCTGCATTGTGGGTATTCAGG...TAGATGTCCTTGTTGGAGGAAGTCTGTCACTGTGGAGGTGTGCTTTGAGATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | TCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTGAGTCTGCCCAAAAATGCTTCAAGTaGCTTCTCCTGGGCCCCACA | + |
Preference number: 4 (lower is better) Translates to: SPHLMSYKKPYTKPSESAQKCFK*LLLGPT Trigger: TGTGGGGCCCAGGAGAAGGCACTTGAAGCATTTTTG...GGCAGACTCACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | AAGATCTCAAAGCACACCTCCACAGTGACAGACTTCCTCCAACAAGGACATCTATTGATTCACTGGATGTaGGATCAGCAGCCGGTAGGT | + |
Preference number: 4 (lower is better) Translates to: KISKHTSTVTDFLQQGHLLIHWM*DQQPVG Trigger: ACCTACCGGCTGCTGATCCCACATCCAGTGAATCAA...TAGATGTCCTTGTTGGAGGAAGTCTGTCACTGTGGAGGTGTGCTTTGAGATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | TATTCAAAACACTATATTCCACTCCTGGCCCCCACAGGCTTGCAGCCATACATATGGCAGGTGTGGGAATaGGTTGTCACCAGTAGAAAG | + |
Preference number: 4 (lower is better) Translates to: YSKHYIPLLAPTGLQPYIWQVWE*VVTSRK Trigger: CTTTCTACTGGTGACAACCCATTCCCACACCTGCCA...TATGTATGGCTGCAAGCCTGTGGGGGCCAGGAGTGGAATATAGTGTTTTGAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | AAACGAAGTTCTGACATAGTACCTAAGATGTATACCCAAAAGAAAGTGGGGACTGGTTTCCCTGGTGCCTaGATGTCCCGAAACTCCAGG | + |
Preference number: 4 (lower is better) Translates to: KRSSDIVPKMYTQKKVGTGFPGA*MSRNSR Trigger: CCTGGAGTTTCGGGACATTCAGGCACCAGGGAAACC...AGTCCCCACTTTCTTTTGGGTATACATCTTAGGTACTATGTCAGAACTTCGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGAGAAGCAGCAGTTCTTaGTCAGGACTCCAGCTCATG | + |
Preference number: 4 (lower is better) Translates to: LAALTAYMNTMHYVNNTERSSSS*SGLQLM Trigger: CATGAGCTGGAGTCCTGATCAAGAACTGCTGCTTCT...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGTGCCCCATCCAACAGTaGCAAACTTGCCTTCTCCAA | + |
Preference number: 4 (lower is better) Translates to: LAALTAYMNTMHYVNNTECPIQQ*QTCLLQ Trigger: TTGGAGAAGGCAAGTTTGTCACTGTTGGATGGGGCA...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATAGCAGCATAAACCAATaGCGACTCCATCCACTGTCA | + |
Preference number: 4 (lower is better) Translates to: CLPITEVHPTLGNSLAEHSSINQ*RLHPLS Trigger: TGACAGTGGATGGAGTCGTCATTGGTTTATGCTGCT...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAATTTAAGCATTCTGTaGAATACTCAGGTCCACACT | + |
Preference number: 4 (lower is better) Translates to: APTYACCLPITEVHPTLGNLSIL*NTQVHT Trigger: AGTGTGGACCTGAGTATTTCACAGAATGCTTAAATT...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTTGGAAGAAAACCTTCTaGCACCAAAGAAATTTCAGT | + |
Preference number: 4 (lower is better) Translates to: APTYACCLPITEVHPTLGWKKTF*HQRNFS Trigger: ACTGAAATTTCTTTGGTGGCAGAAGGTTTTCTTCCA...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | GACTCTGCATCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTCCAACACATTCCAGCTaGTGTGTGCTGAGATTGCAG | + |
Preference number: 4 (lower is better) Translates to: DSASPHLMSYKKPYTKPSPTHSS*CVLRLQ Trigger: CTGCAATCTCAGCACACAGCAGCTGGAATGTGTTGG...ACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGATGCAGAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | TCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTGAGTCTGCCGCCACAAGCCAAAAATaGTTCAAGTGCCTTCTCCTG | + |
Preference number: 4 (lower is better) Translates to: SPHLMSYKKPYTKPSESAATSQK*FKCLLL Trigger: CAGGAGAAGGCACTTGAAGCATTTTTGGCTTGTGGC...GGCAGACTCACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | TCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTAGTCCATCCTTCTTTGAGGCTATaGTTCTTGCGCTCTGCCTTC | + |
Preference number: 4 (lower is better) Translates to: SWRNISLGLAYSLRGLVHPSLRL*FLRSAF Trigger: GAAGGCAGAGCGCAAGAAGCATAGCCTCAAAGAAGG...ATGGACTAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGGGGTCTGTTGAGCTGTaGCAAGAAGCAGCAGTTCTT | + |
Preference number: 4 (lower is better) Translates to: LAALTAYMNTMHYVNNTEGSVEL*QEAAVL Trigger: AAGAACTGCTGCTTCTTGCCACAGCTCAACAGACCC...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | GACTCTGCATCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTCAGAAATCTGGTTACTaGCGTCGAGGACAGCAAGGT | + |
Preference number: 4 (lower is better) Translates to: DSASPHLMSYKKPYTKPSQKSGY*RRGQQG Trigger: ACCTTGCTGTCCTCGACGCCAGTAACCAGATTTCTG...ACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGATGCAGAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGAAAACCTGGCAGGTGTaGGAATGGGTTGTCACCAGT | + |
Preference number: 4 (lower is better) Translates to: LAALTAYMNTMHYVNNTEKTWQV*EWVVTS Trigger: ACTGGTGACAACCCATTCCCACACCTGCCAGGTTTT...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGGCAGAATTTCTCCACTaGCCTCATGACTGCCACTCA | + |
Preference number: 4 (lower is better) Translates to: LAALTAYMNTMHYVNNTEAEFLH*PHDCHS Trigger: TGAGTGGCAGTCATGAGGCCAGTGGAGAAATTCTGC...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATATCCTGGAGTTACTGTaGGAGTATCTGCCACTCATC | + |
Preference number: 4 (lower is better) Translates to: CLPITEVHPTLGNSLAEHILELL*EYLPLI Trigger: GATGAGTGGCAGATACTCCCACAGTAACTCCAGGAT...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | TATTCAAAACACTATATTCCACTCCTGGCCCCCACAGGCTTGCAGCCATACATAACACAGCAAATGACGTaGTATTTGATGCGACCTCAG | + |
Preference number: 4 (lower is better) Translates to: YSKHYIPLLAPTGLQPYITQQMT*YLMRPQ Trigger: CTGAGGTCGCATCAAATATCACGTCATTTGCTGTGT...TATGTATGGCTGCAAGCCTGTGGGGGCCAGGAGTGGAATATAGTGTTTTGAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | TCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTAGTCCATTCATGGCGTCACAGATaGGGTCAAGTTTCTTCCCAT | + |
Preference number: 4 (lower is better) Translates to: SWRNISLGLAYSLRGLVHSWRHR*GQVSSH Trigger: ATGGGAAGAAACTTGACCTCATCTGTGACGCCATGA...ATGGACTAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | AAACGAAGTTCTGACATAGTACCTAAGATGTATACCCAAAAGAAAGTGGGGACTCCACTTCCGAATCTGTaGCAAGACCAAGGCCCGATG | + |
Preference number: 4 (lower is better) Translates to: KRSSDIVPKMYTQKKVGTPLPNL*QDQGPM Trigger: CATCGGGCCTTGGTCTTGGCACAGATTCGGAAGTGG...AGTCCCCACTTTCTTTTGGGTATACATCTTAGGTACTATGTCAGAACTTCGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGTGCAAGCGGTTTTTATaGCGAATGAATGTGGCTGTC | + |
Preference number: 4 (lower is better) Translates to: SILPAHMFVYHMLAWCSVCKRFL*RMNVAV Trigger: GACAGCCACATTCATTCGCCATAAAAACCGCTTGCA...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | TCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTAGTCCATTCTTCACATGAGATGTaGGTATCGACAGGCAGAACT | + |
Preference number: 4 (lower is better) Translates to: SWRNISLGLAYSLRGLVHSSHEM*VSTGRT Trigger: AGTTCTGCCTGTCGATACTCACATCTCATGTGAAGA...ATGGACTAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGGGTTTTTATGGCGAATaGATGTGGCTGTCTCAGAGT | + |
Preference number: 4 (lower is better) Translates to: LAALTAYMNTMHYVNNTEGFYGE*MWLSQS Trigger: ACTCTGAGACAGCCACATTCATTCGCCATAAAAACC...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATTTCCATCTGTGTGCATaGATGAACAAATCGAACAGG | + |
Preference number: 4 (lower is better) Translates to: CLPITEVHPTLGNSLAEHFHLCA*MNKSNR Trigger: CCTGTTCGATTTGTTCATCCATGCACACAGATGGAA...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGATAAGCTTTGTGTCCTaGGGAACAACTGTCACGATC | + |
Preference number: 4 (lower is better) Translates to: LAALTAYMNTMHYVNNTEISFVS*GTTVTI Trigger: GATCGTGACAGTTGTTCCCCAGGACACAAAGCTTAT...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATTGGTTGGGTTTATCTTaGGTAGATGCAATCAAACTG | + |
Preference number: 4 (lower is better) Translates to: CLPITEVHPTLGNSLAEHWLGLS*VDAIKL Trigger: CAGTTTGATTGCATCTACTCAAGATAAACCCAACCA...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | GACTCTGCATCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTTCATTGTTCCCGAACTaGATCGAGTATCTCTTTTCC | + |
Preference number: 4 (lower is better) Translates to: DSASPHLMSYKKPYTKPSSLFPN*IEYLFS Trigger: GGAAAAGAGATACTCGATTCAGTTCGGGAACAATGA...ACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGATGCAGAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | TATGTTAACAACACAGAGCAACTTAGAAACGTGGTTCCACTTGTCTTCACTTTTCTCACAGCAAAATACTaGCCATCCCCACGCCAGGTA | + |
Preference number: 4 (lower is better) Translates to: YVNNTEQLRNVVPLVFTFLTAKY*PSPRQV Trigger: TACCTGGCGTGGGGATGGGCAGTATTTTGCTGTGAG...AAAAGTGAAGACAAGTGGAACCACGTTTCTAAGTTGCTCTGTGTTGTTAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | AAACGAAGTTCTGACATAGTACCTAAGATGTATACCCAAAAGAAAGTGGGGACTCGATCAGTGGTCCAGTaGCAGTCACAGCATAGATAC | + |
Preference number: 4 (lower is better) Translates to: KRSSDIVPKMYTQKKVGTRSVVQ*QSQHRY Trigger: GTATCTATGCTGTGACTGGCACTGGACCACTGATCG...AGTCCCCACTTTCTTTTGGGTATACATCTTAGGTACTATGTCAGAACTTCGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | TCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTAGTCCATCATAGCTTTTCAGAGTaGAACTGTCTTCCTTTGGGA | + |
Preference number: 4 (lower is better) Translates to: SWRNISLGLAYSLRGLVHHSFSE*NCLPLG Trigger: TCCCAAAGGAAGACAGTTCCACTCTGAAAAGCTATG...ATGGACTAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATTTTCGAGAAAGACCTTaGGGTTATGGTCATGAATCA | + |
Preference number: 4 (lower is better) Translates to: CLPITEVHPTLGNSLAEHFRERP*GYGHES Trigger: TGATTCATGACCATAACCCCAAGGTCTTTCTCGAAA...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGCTACTTCCATCTGTGTaGATGGATGAACAAATCGAA | + |
Preference number: 4 (lower is better) Translates to: TKTIPTIMEKHFFGAGLQLLPSV*MDEQIE Trigger: TTCGATTTGTTCATCCATGCACACAGATGGAAGTAG...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | TATGTTAACAACACAGAGCAACTTAGAAACGTGGTTCCACTTGTCTTCACTTTTCCAAAATCATCCTGGTaGATCTGCTCCTCTGCGATC | + |
Preference number: 4 (lower is better) Translates to: YVNNTEQLRNVVPLVFTFPKSSW*ICSSAI Trigger: GATCGCAGAGGAGCAGATCCACCAGGATGATTTTGG...AAAAGTGAAGACAAGTGGAACCACGTTTCTAAGTTGCTCTGTGTTGTTAACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | TATGTTAACAACACAGAGCAACTTAGAAACGTGGTTCCACTTGTCTTCACTTTTCTGGCACAGACTCACTaGTTGACTGCAAGGCAAACT | + |
Preference number: 4 (lower is better) Translates to: YVNNTEQLRNVVPLVFTFLAQTH*LTARQT Trigger: AGTTTGCCTTGCAGTCAACCAGTGAGTCTGTGCCAG...AAAAGTGAAGACAAGTGGAACCACGTTTCTAAGTTGCTCTGTGTTGTTAACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | AAACGAAGTTCTGACATAGTACCTAAGATGTATACCCAAAAGAAAGTGGGGACTCATTTGCCAAGTCATTaGCACTATTCCCAGAGCTCC | + |
Preference number: 4 (lower is better) Translates to: KRSSDIVPKMYTQKKVGTHLPSH*HYSQSS Trigger: GGAGCTCTGGGAATAGTGCCAATGACTTGGCAAATG...AGTCCCCACTTTCTTTTGGGTATACATCTTAGGTACTATGTCAGAACTTCGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | TCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTAGTCCATCTCCTAGTTTCACTGTaGAATCCATGTTTGGCTTAT | + |
Preference number: 4 (lower is better) Translates to: SWRNISLGLAYSLRGLVHLLVSL*NPCLAY Trigger: ATAAGCCAAACATGGATTCCACAGTGAAACTAGGAG...ATGGACTAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CCA 90 bp | ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTTTGGGCTTCTAAAATaGAAGGCTTTACACTGGTTT | + |
Preference number: 4 (lower is better) Translates to: TKTIPTIMEKHFFGAGLQFGLLK*KALHWF Trigger: AAACCAGTGTAAAGCCTTCCATTTTAGAAGCCCAAA...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR GCA 90 bp | AAACGAAGTTCTGACATAGTACCTAAGATGTATACCCAAAAGAAAGTGGGGACTAATAACAGCCACATTTaGCAAGTCATTGGCACTATT | + |
Preference number: 4 (lower is better) Translates to: KRSSDIVPKMYTQKKVGTNNSHI*QVIGTI Trigger: AATAGTGCCAATGACTTGGCAAATGTGGCTGTTATT...AGTCCCCACTTTCTTTTGGGTATACATCTTAGGTACTATGTCAGAACTTCGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | TATGTTAACAACACAGAGCAACTTAGAAACGTGGTTCCACTTGTCTTCACTTTTTATCTCTTTTCCAAATaGGGTGTTGTAAGAGGAACT | + |
Preference number: 4 (lower is better) Translates to: YVNNTEQLRNVVPLVFTFYLFSK*GVVRGT Trigger: AGTTCCTCTTACAACACCTCATTTGGAAAAGAGATA...AAAAGTGAAGACAAGTGGAACCACGTTTCTAAGTTGCTCTGTGTTGTTAACATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR TCA 90 bp | TATGTTAACAACACAGAGCAACTTAGAAACGTGGTTCCACTTGTCTTCACTTTTTTGGGGTTATGGTCATaGATCAGATTGAGGTTAATT | + |
Preference number: 4 (lower is better) Translates to: YVNNTEQLRNVVPLVFTFLGLWS*IRLRLI Trigger: AATTAACCTCAATCTGATTCATGACCATAACCCCAA...AAAAGTGAAGACAAGTGGAACCACGTTTCTAAGTTGCTCTGTGTTGTTAACATA 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 90 bp | CTGGTTTCCGAGAAGAGGTCTGACTCTGGGCCATGGGCCACCTCGTaGTCCACATGGACCTGTGGTGCTTGCCTCCTGAGCGCTCGAACC | + |
Preference number: 5 (lower is better) Translates to: LVSEKRSDSGPWATS*STWTCGACLLSART Trigger: GGTTCGAGCGCTCAGGAGGCAAGCACCACAGGTCCATGTGGATCACGAGGTGGCCCATGGCCCAGAGTCAGACCTCTTCTCGGAAACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 90 bp | CAAGCCAGGGCGGGCCCCAGTCCTGGCACAGACTCACTGGTTGACTaGAAGGCAAACTCTCGGTTCCATACGCGGATCTTCCGAGCCTCT | + |
Preference number: 5 (lower is better) Translates to: QARAGPSPGTDSLVD*KANSRFHTRIFRAS Trigger: AGAGGCTCGGAAGATCCGCGTATGGAACCGAGAGTTTGCCTTGCAGTCAACCAGTGAGTCTGTGCCAGGACTGGGGCCCGCCCTGGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 90 bp | TTTCCAAGCCAGGGCGGGCCCCAGTCCTGGCACAGACTCACTGGTTaGCTGCAAGGCAAACTCTCGGTTCCATACGCGGATCTTCCGAGC | + |
Preference number: 5 (lower is better) Translates to: FPSQGGPQSWHRLTG*LQGKLSVPYADLPS Trigger: GCTCGGAAGATCCGCGTATGGAACCGAGAGTTTGCCTTGCAGTCAACCAGTGAGTCTGTGCCAGGACTGGGGCCCGCCCTGGCTTGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | AGGGTTTCCAAGCCAGGGCGGGCCCCAGTCCTGGCACAGACTCACTaGTTGACTGCAAGGCAAACTCTCGGTTCCATACGCGGATCTTCC | + |
Preference number: 5 (lower is better) Translates to: RVSKPGRAPVLAQTH*LTARQTLGSIRGSS Trigger: GGAAGATCCGCGTATGGAACCGAGAGTTTGCCTTGCAGTCAACCAGTGAGTCTGTGCCAGGACTGGGGCCCGCCCTGGCTTGGAAACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | CAGTGCCAGTCACAGCATAGATACCGCCAGCCCGTACAGAGAACATaGAGTCGACACGGCGTCACCGGGTCCCACAGCAGAGACACGATC | + |
Preference number: 5 (lower is better) Translates to: QCQSQHRYRQPVQRT*SRHGVTGSHSRDTI Trigger: GATCGTGTCTCTGCTGTGGGACCCGGTGACGCCGTGTCGACTCCATGTTCTCTGTACGGGCTGGCGGTATCTATGCTGTGACTGGCACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 90 bp | GGCATTCTCAGGCAACTGCACCGGAAAGGCTGTTGGCCTGCCTTCTaGGCCGTGGAACTGGGTCTGCTTACTGCCCCATCCAACAGTGAC | + |
Preference number: 5 (lower is better) Translates to: GILRQLHRKGCWPAF*AVELGLLTAPSNSD Trigger: GTCACTGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGTGCAGTTGCCTGAGAATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | TGGAGTCGACACGGCGTCACCGGGTCCCACAGCAGAGACACGATCTaGTTCTTCCCAGTGGTGCTGAAGGGCAGGCTTTGCTTCAGATAC | + |
Preference number: 5 (lower is better) Translates to: WSRHGVTGSHSRDTI*FFPVVLKGRLCFRY Trigger: GTATCTGAAGCAAAGCCTGCCCTTCAGCACCACTGGGAAGAACCAGATCGTGTCTCTGCTGTGGGACCCGGTGACGCCGTGTCGACTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CAA 90 bp | TCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGGTTCGACATCCAGCTGGCCTaGCTCCTCATCCACCTCAGA | + |
Preference number: 5 (lower is better) Translates to: STPTRPRLIVPLPTGQGFDIQLA*LLIHLR Trigger: TCTGAGGTGGATGAGGAGCAAGGCCAGCTGGATGTC...GAACCCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 90 bp | CCGGGTCCCACAGCAGAGACACGATCTGGTTCTTCCCAGTGGTGCTaGAGGGCAGGCTTTGCTTCAGATACCAGTGATAGTTCCCCACGG | + |
Preference number: 5 (lower is better) Translates to: PGPTAETRSGSSQWC*RAGFASDTSDSSPR Trigger: CCGTGGGGAACTATCACTGGTATCTGAAGCAAAGCCTGCCCTTCAGCACCACTGGGAAGAACCAGATCGTGTCTCTGCTGTGGGACCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | CACCGTGCCCTGCTCAGCTCGCAGACAGAAACACTGAGGTTTCCCTaGTGCCTGAATGTCCCGAAACTCCAGGGTCCGATGCAACTTCAG | + |
Preference number: 5 (lower is better) Translates to: HRALLSSQTETLRFP*CLNVPKLQGPMQLQ Trigger: CTGAAGTTGCATCGGACCCTGGAGTTTCGGGACATTCAGGCACCAGGGAAACCTCAGTGTTTCTGTCTGCGAGCTGAGCAGGGCACGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 90 bp | CAGGATCTACTTCCGTCAGTCCACGTTCTGAGCCAATCAGCACCGTaGCCTGCTCAGCTCGCAGACAGAAACACTGAGGTTTCCCTGGTG | + |
Preference number: 5 (lower is better) Translates to: QDLLPSVHVLSQSAP*PAQLADRNTEVSLV Trigger: CACCAGGGAAACCTCAGTGTTTCTGTCTGCGAGCTGAGCAGGGCACGGTGCTGATTGGCTCAGAACGTGGACTGACGGAAGTAGATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 90 bp | CACAGCCTCTTCATAATCCTGGGCGTACTGTTCCAGGACTGTGGCTaGCTCACTGTGCTTCCTCTGCTCCACCAGCTTTCCTGCCAGAGT | + |
Preference number: 5 (lower is better) Translates to: HSLFIILGVLFQDCG*LTVLPLLHQLSCQS Trigger: ACTCTGGCAGGAAAGCTGGTGGAGCAGAGGAAGCACAGTGAGGCAGCCACAGTCCTGGAACAGTACGCCCAGGATTATGAAGAGGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | TCAGGCAACTGCACCGGAAAGGCTGTTGGCCTGCCTTCTGAGCCGTaGAACTGGGTCTGCTTACTGCCCCATCCAACAGTGACAAACTTG | + |
Preference number: 5 (lower is better) Translates to: SGNCTGKAVGLPSEP*NWVCLLPHPTVTNL Trigger: CAAGTTTGTCACTGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGTGCAGTTGCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | AACACTCACAGCAAAATACTGCCCATCCCCACGCCAGGTAATGTGTaGTCTGCGGTCGTCCCAGGGCAAGGCATTCTCAGGCAACTGCAC | + |
Preference number: 5 (lower is better) Translates to: NTHSKILPIPTPGNV*SAVVPGQGILRQLH Trigger: GTGCAGTTGCCTGAGAATGCCTTGCCCTGGGACGACCGCAGACCACACATTACCTGGCGTGGGGATGGGCAGTATTTTGCTGTGAGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | ATTCACTGGATGTGGGATCAGCAGCCGGTAGGTACACATGGGAGGTaGGACGACCGTCTGCCGAAAGACTGTCACCAACACCCTGTTTCC | + |
Preference number: 5 (lower is better) Translates to: IHWMWDQQPVGTHGR*DDRLPKDCHQHPVS Trigger: GGAAACAGGGTGTTGGTGACAGTCTTTCGGCAGACGGTCGTCCCACCTCCCATGTGTACCTACCGGCTGCTGATCCCACATCCAGTGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 90 bp | CATCTCACTGCCACTCATAATACTGCTGGTTTCCGAGAAGAGGTCTaGCTCTGGGCCATGGGCCACCTCGTGATCCACATGGACCTGTGG | + |
Preference number: 5 (lower is better) Translates to: HLTATHNTAGFREEV*LWAMGHLVIHMDLW Trigger: CCACAGGTCCATGTGGATCACGAGGTGGCCCATGGCCCAGAGTCAGACCTCTTCTCGGAAACCAGCAGTATTATGAGTGGCAGTGAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 90 bp | CGTGCCCTGCTCAGCTCGCAGACAGAAACACTGAGGTTTCCCTGGTaGCTGAATGTCCCGAAACTCCAGGGTCCGATGCAACTTCAGATT | + |
Preference number: 5 (lower is better) Translates to: RALLSSQTETLRFPW*LNVPKLQGPMQLQI Trigger: AATCTGAAGTTGCATCGGACCCTGGAGTTTCGGGACATTCAGGCACCAGGGAAACCTCAGTGTTTCTGTCTGCGAGCTGAGCAGGGCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 90 bp | GCCAAGTCATTGGCACTATTCCCAGAGCTCCGATCAGTGGTCCAGTaGCAGTCACAGCATAGATACCGCCAGCCCGTACAGAGAACATGG | + |
Preference number: 5 (lower is better) Translates to: AKSLALFPELRSVVQ*QSQHRYRQPVQRTW Trigger: CCATGTTCTCTGTACGGGCTGGCGGTATCTATGCTGTGACTGGCACTGGACCACTGATCGGAGCTCTGGGAATAGTGCCAATGACTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 90 bp | TCCACATGGACCTGTGGTGCTTGCCTCCTGAGCGCTCGAACCACCTaGAAGCGGTTTTTATGGCGAATGAATGTGGCTGTCTCAGAGTCC | + |
Preference number: 5 (lower is better) Translates to: STWTCGACLLSARTT*KRFLWRMNVAVSES Trigger: GGACTCTGAGACAGCCACATTCATTCGCCATAAAAACCGCTTGCAGGTGGTTCGAGCGCTCAGGAGGCAAGCACCACAGGTCCATGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | AACTGCACCGGAAAGGCTGTTGGCCTGCCTTCTGAGCCGTGGAACTaGGTCTGCTTACTGCCCCATCCAACAGTGACAAACTTGCCTTCT | + |
Preference number: 5 (lower is better) Translates to: NCTGKAVGLPSEPWN*VCLLPHPTVTNLPS Trigger: AGAAGGCAAGTTTGTCACTGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGTGCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | TTCCAGCAGGCTCAGCTTCCACTGGCTTCTCGGGTCCATCTTCGGTaGCATATAAACCCCAGCATCGAGAGCAGGGACACAAGTCTTCTG | + |
Preference number: 5 (lower is better) Translates to: FQQAQLPLASRVHLR*HINPSIESRDTSLL Trigger: CAGAAGACTTGTGTCCCTGCTCTCGATGCTGGGGTTTATATGCCACCGAAGATGGACCCGAGAAGCCAGTGGAAGCTGAGCCTGCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CAA 90 bp | GCTGGTCTTGAACTTGCATCAGTCTTTCTGCCCCAGCTTCCTGGGCTGCTGGGATGCTGTGTGCTGAGATaGCAGACTATGACGTCCCCA | + |
Preference number: 5 (lower is better) Translates to: AGLELASVFLPQLPGLLGCCVLR*QTMTSP Trigger: TGGGGACGTCATAGTCTGCAATCTCAGCACACAGCA...TCCCAGCAGCCCAGGAAGCTGGGGCAGAAAGACTGATGCAAGTTCAAGACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 90 bp | ACCGGAAAGGCTGTTGGCCTGCCTTCTGAGCCGTGGAACTGGGTCTaGTTACTGCCCCATCCAACAGTGACAAACTTGCCTTCTCCAAAA | + |
Preference number: 5 (lower is better) Translates to: TGKAVGLPSEPWNWV*LLPHPTVTNLPSPK Trigger: TTTTGGAGAAGGCAAGTTTGTCACTGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 90 bp | TTCCGAGCCTCTGTTTGTCGACAAACAACACTCACAGCAAAATACTaGCCATCCCCACGCCAGGTAATGTGTGGTCTGCGGTCGTCCCAG | + |
Preference number: 5 (lower is better) Translates to: FRASVCRQTTLTAKY*PSPRQVMCGLRSSQ Trigger: CTGGGACGACCGCAGACCACACATTACCTGGCGTGGGGATGGGCAGTATTTTGCTGTGAGTGTTGTTTGTCGACAAACAGAGGCTCGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CAA 90 bp | GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGTGGAACTGTCTTCCTTaGGGAGGTCTTCTAGCCATA | + |
Preference number: 5 (lower is better) Translates to: DIYTNKATPNSATAHGPRWNCLP*GGLLAI Trigger: TATGGCTAGAAGACCTCCCAAAGGAAGACAGTTCCA...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 90 bp | GAGCTGTGGCAAGAAGCAGCAGTTCTTGATCAGGACTCCAGCTCATaGCAGAGATACCACTGGCCACACTCCCAACACATTCCAGCTGCT | + |
Preference number: 5 (lower is better) Translates to: ELWQEAAVLDQDSSS*QRYHWPHSQHIPAA Trigger: AGCAGCTGGAATGTGTTGGGAGTGTGGCCAGTGGTATCTCTGTCATGAGCTGGAGTCCTGATCAAGAACTGCTGCTTCTTGCCACAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | GTCATTCCCAAGGTGAGCAGAGAATATGACTTGATTCACTGGATGTaGGATCAGCAGCCGGTAGGTACACATGGGAGGTGGGACGACCGT | + |
Preference number: 5 (lower is better) Translates to: VIPKVSREYDLIHWM*DQQPVGTHGRWDDR Trigger: ACGGTCGTCCCACCTCCCATGTGTACCTACCGGCTGCTGATCCCACATCCAGTGAATCAAGTCATATTCTCTGCTCACCTTGGGAATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 90 bp | CGTGAACCCCTTTCCACTTTCCGCAGAATTTCTCCACTGGCCTCATaGCTGCCACTCAGAGCTGCCTGTAGCATTTTAAGTGAGGCACCA | + |
Preference number: 5 (lower is better) Translates to: REPLSTFRRISPLAS*LPLRAACSILSEAP Trigger: TGGTGCCTCACTTAAAATGCTACAGGCAGCTCTGAGTGGCAGTCATGAGGCCAGTGGAGAAATTCTGCGGAAAGTGGAAAGGGGTTCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | AGCAAGGTCATTCCCAAGGTGAGCAGAGAATATGACTTGATTCACTaGATGTGGGATCAGCAGCCGGTAGGTACACATGGGAGGTGGGAC | + |
Preference number: 5 (lower is better) Translates to: SKVIPKVSREYDLIH*MWDQQPVGTHGRWD Trigger: GTCCCACCTCCCATGTGTACCTACCGGCTGCTGATCCCACATCCAGTGAATCAAGTCATATTCTCTGCTCACCTTGGGAATGACCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | GGTTCCACAGCCAGAGAAGGTGACTCCCAAAGGTACTTGAGCACCTaGCCATCAGCCAGCTGTACTGCTAATGACTTGGTCTTAGAACAG | + |
Preference number: 5 (lower is better) Translates to: GSTAREGDSQRYLST*PSASCTANDLVLEQ Trigger: CTGTTCTAAGACCAAGTCATTAGCAGTACAGCTGGCTGATGGCCAGGTGCTCAAGTACCTTTGGGAGTCACCTTCTCTGGCTGTGGAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | ACCTCCAGGTTTCCCCTTGGCATCTGTAGTATAAGCTTTGTGTCCTaGGGAACAACTGTCACGATCCGTGAACCCCTTTCCACTTTCCGC | + |
Preference number: 5 (lower is better) Translates to: TSRFPLGICSISFVS*GTTVTIREPLSTFR Trigger: GCGGAAAGTGGAAAGGGGTTCACGGATCGTGACAGTTGTTCCCCAGGACACAAAGCTTATACTACAGATGCCAAGGGGAAACCTGGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CAA 90 bp | GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTGCTGAAGGGCAGGCTTaGCTTCAGATACCAGTGATA | + |
Preference number: 5 (lower is better) Translates to: APTYACCLPITEVHPTLGAEGQA*LQIPVI Trigger: TATCACTGGTATCTGAAGCAAAGCCTGCCCTTCAGC...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CAA 90 bp | TATTCAAAACACTATATTCCACTCCTGGCCCCCACAGGCTTGCAGCCATACATAATGGACCTGTGGTGCTaGCCTCCTGAGCGCTCGAAC | + |
Preference number: 5 (lower is better) Translates to: YSKHYIPLLAPTGLQPYIMDLWC*PPERSN Trigger: GTTCGAGCGCTCAGGAGGCAAGCACCACAGGTCCAT...TATGTATGGCTGCAAGCCTGTGGGGGCCAGGAGTGGAATATAGTGTTTTGAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 90 bp | GCCTCCTCTACACTCACACTCTCAGGATCAAAGGGAAGATTTCCTTaGAGTTCCTGTACCTTCTGCAGCACAATTTCCAGCTCCGGGGTG | + |
Preference number: 5 (lower is better) Translates to: ASSTLTLSGSKGRFP*SSCTFCSTISSSGV Trigger: CACCCCGGAGCTGGAAATTGTGCTGCAGAAGGTACAGGAACTTCAAGGAAATCTTCCCTTTGATCCTGAGAGTGTGAGTGTAGAGGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CAA 90 bp | GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAGGTGTGGGAATGGGTaGTCACCAGTAGAAAGTCAT | + |
Preference number: 5 (lower is better) Translates to: APTYACCLPITEVHPTLGRCGNG*SPVESH Trigger: ATGACTTTCTACTGGTGACAACCCATTCCCACACCT...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 90 bp | ACCTTCTGCAGCACAATTTCCAGCTCCGGGGTGGTTTTCTTCACATaGGATGTGAGTATCGACAGGCAGAACTTTCGAGGATTGATGGCC | + |
Preference number: 5 (lower is better) Translates to: TFCSTISSSGVVFFT*DVSIDRQNFRGLMA Trigger: GGCCATCAATCCTCGAAAGTTCTGCCTGTCGATACTCACATCTCATGTGAAGAAAACCACCCCGGAGCTGGAAATTGTGCTGCAGAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 90 bp | TTTGAGGCTATGCTTCTTGCGCTCTGCCTTCCGACGGTTTTTAGATaGCCTCGCAGATATCCTGGAGTTACTGTGGGAGTATCTGCCACT | + |
Preference number: 5 (lower is better) Translates to: FEAMLLALCLPTVFR*PRRYPGVTVGVSAT Trigger: AGTGGCAGATACTCCCACAGTAACTCCAGGATATCTGCGAGGTCATCTAAAAACCGTCGGAAGGCAGAGCGCAAGAAGCATAGCCTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 90 bp | CCACACACACAGATTCCTGATCCAGCAAGTCCTGAATACCCACAATaGAGCCACTTCCATCCTCTGGAAGAAAACCTTCTGCCACCAAAG | + |
Preference number: 5 (lower is better) Translates to: PHTQIPDPASPEYPQ*SHFHPLEENLLPPK Trigger: CTTTGGTGGCAGAAGGTTTTCTTCCAGAGGATGGAAGTGGCTGCATTGTGGGTATTCAGGACTTGCTGGATCAGGAATCTGTGTGTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | GCTGCCTGTAGCATTTTAAGTGAGGCACCACTTAGGGAGAAAACCTaGCAGGTGTGGGAATGGGTTGTCACCAGTAGAAAGTCATCACAC | + |
Preference number: 5 (lower is better) Translates to: AACSILSEAPLREKT*QVWEWVVTSRKSSH Trigger: GTGTGATGACTTTCTACTGGTGACAACCCATTCCCACACCTGCCAGGTTTTCTCCCTAAGTGGTGCCTCACTTAAAATGCTACAGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | TCACAGATGAGGTCAAGTTTCTTCCCATCAGGATGTGTGGACACCTaGACACTCTTGGTAATCGGGGGAGGGTACATGGTCTTTGTGACA | + |
Preference number: 5 (lower is better) Translates to: SQMRSSFFPSGCVDT*TLLVIGGGYMVFVT Trigger: TGTCACAAAGACCATGTACCCTCCCCCGATTACCAAGAGTGTCCAGGTGTCCACACATCCTGATGGGAAGAAACTTGACCTCATCTGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | TTAAGTGAGGCACCACTTAGGGAGAAAACCTGGCAGGTGTGGGAATaGGTTGTCACCAGTAGAAAGTCATCACACACAGCAAATGACGTG | + |
Preference number: 5 (lower is better) Translates to: LSEAPLREKTWQVWE*VVTSRKSSHTANDV Trigger: CACGTCATTTGCTGTGTGTGATGACTTTCTACTGGTGACAACCCATTCCCACACCTGCCAGGTTTTCTCCCTAAGTGGTGCCTCACTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 90 bp | AAAGACTGTCACCAACACCCTGTTTCCATCAATAACAGCCACATTTaGCAAGTCATTGGCACTATTCCCAGAGCTCCGATCAGTGGTCCA | + |
Preference number: 5 (lower is better) Translates to: KDCHQHPVSINNSHI*QVIGTIPRAPISGP Trigger: TGGACCACTGATCGGAGCTCTGGGAATAGTGCCAATGACTTGGCAAATGTGGCTGTTATTGATGGAAACAGGGTGTTGGTGACAGTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | CCATGTTTGGCTTATCACCACACTTGTAGACAGAAATCTGGTTACTaGCGTCGAGGACAGCAAGGTCATTCCCAAGGTGAGCAGAGAATA | + |
Preference number: 5 (lower is better) Translates to: PCLAYHHTCRQKSGY*RRGQQGHSQGEQRI Trigger: TATTCTCTGCTCACCTTGGGAATGACCTTGCTGTCCTCGACGCCAGTAACCAGATTTCTGTCTACAAGTGTGGTGATAAGCCAAACATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 90 bp | TTCCGACGGTTTTTAGATGACCTCGCAGATATCCTGGAGTTACTGTaGGAGTATCTGCCACTCATCTCACTGCCACTCATAATACTGCTG | + |
Preference number: 5 (lower is better) Translates to: FRRFLDDLADILELL*EYLPLISLPLIILL Trigger: CAGCAGTATTATGAGTGGCAGTGAGATGAGTGGCAGATACTCCCACAGTAACTCCAGGATATCTGCGAGGTCATCTAAAAACCGTCGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CAA 90 bp | GGAAGCATGGCAGCCTGCAGGCAGAAACAGTGCTGTACAAGGCAAGAGTTCTATAAAGGGAAGATTTCCTaGAAGTTCCTGTACCTTCTG | + |
Preference number: 5 (lower is better) Translates to: GSMAACRQKQCCTRQEFYKGKIS*KFLYLL Trigger: CAGAAGGTACAGGAACTTCAAGGAAATCTTCCCTTT...ATAGAACTCTTGCCTTGTACAGCACTGTTTCTGCCTGCAGGCTGCCATGCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 90 bp | AAATGCTTCTTTAAACATAAGTTTGTCCAGCCACTTCCGAATCTGTaGCAAGACCAAGGCCCGATGATGAACAACCTCCAGGTTTCCCCT | + |
Preference number: 5 (lower is better) Translates to: KCFFKHKFVQPLPNL*QDQGPMMNNLQVSP Trigger: AGGGGAAACCTGGAGGTTGTTCATCATCGGGCCTTGGTCTTGGCACAGATTCGGAAGTGGCTGGACAAACTTATGTTTAAAGAAGCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 90 bp | ATAGCCAGGAAAGTGTCGTCTTCAACCCAGGTGAGAAAGCTCAACTaGAGTGCGTTTACTTCTTCTTCTTCTTCTTCTTCATTGTTCCCG | + |
Preference number: 5 (lower is better) Translates to: IARKVSSSTQVRKLN*SAFTSSSSSSSLFP Trigger: CGGGAACAATGAAGAAGAAGAAGAAGAAGAAGTAAACGCACTGCAGTTGAGCTTTCTCACCTGGGTTGAAGACGACACTTTCCTGGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CAA 90 bp | ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGAAGAAGCAGCAGTTCTaGATCAGGACTCCAGCTCAT | + |
Preference number: 5 (lower is better) Translates to: TKTIPTIMEKHFFGAGLQKKQQF*IRTPAH Trigger: ATGAGCTGGAGTCCTGATCAAGAACTGCTGCTTCTT...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 90 bp | AATACCCACAATGCAGCCACTTCCATCCTCTGGAAGAAAACCTTCTaGCACCAAAGAAATTTCAGTCTTCACTTCTCTTCTCACAGGATC | + |
Preference number: 5 (lower is better) Translates to: NTHNAATSILWKKTF*HQRNFSLHFSSHRI Trigger: GATCCTGTGAGAAGAGAAGTGAAGACTGAAATTTCTTTGGTGGCAGAAGGTTTTCTTCCAGAGGATGGAAGTGGCTGCATTGTGGGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 90 bp | GACAAACTTGCCTTCTCCAAAATCATCCTGGTGGATCTGCTCCTCTaGGATCACTTCAAAGTCTTTTGTCATCATAATCAGGGTCTGTTG | + |
Preference number: 5 (lower is better) Translates to: DKLAFSKIILVDLLL*DHFKVFCHHNQGLL Trigger: CAACAGACCCTGATTATGATGACAAAAGACTTTGAAGTGATCGCAGAGGAGCAGATCCACCAGGATGATTTTGGAGAAGGCAAGTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 90 bp | CCAACAGTGACAAACTTGCCTTCTCCAAAATCATCCTGGTGGATCTaGTCCTCTGCGATCACTTCAAAGTCTTTTGTCATCATAATCAGG | + |
Preference number: 5 (lower is better) Translates to: PTVTNLPSPKSSWWI*SSAITSKSFVIIIR Trigger: CCTGATTATGATGACAAAAGACTTTGAAGTGATCGCAGAGGAGCAGATCCACCAGGATGATTTTGGAGAAGGCAAGTTTGTCACTGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CAA 90 bp | AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGAGCAGAGAATATGACTaGATTCACTGGATGTGGGAT | + |
Preference number: 5 (lower is better) Translates to: SILPAHMFVYHMLAWCSVSREYD*IHWMWD Trigger: ATCCCACATCCAGTGAATCAAGTCATATTCTCTGCT...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CAA 90 bp | AAACGAAGTTCTGACATAGTACCTAAGATGTATACCCAAAAGAAAGTGGGGACTAGAGGACTCCCTTCTTaGAGGCTATGCTTCTTGCGC | + |
Preference number: 5 (lower is better) Translates to: KRSSDIVPKMYTQKKVGTRGLPS*RLCFLR Trigger: GCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTCT...AGTCCCCACTTTCTTTTGGGTATACATCTTAGGTACTATGTCAGAACTTCGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CAA 90 bp | AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGCTGGTTGGGTTTATCTaGAGTAGATGCAATCAAACT | + |
Preference number: 5 (lower is better) Translates to: SILPAHMFVYHMLAWCSVLVGFI*SRCNQT Trigger: AGTTTGATTGCATCTACTCAAGATAAACCCAACCAG...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CAA 90 bp | ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTATCGTTTCAAGTACTaGTCTATGGTGAACCTCTGG | + |
Preference number: 5 (lower is better) Translates to: TKTIPTIMEKHFFGAGLQYRFKY*SMVNLW Trigger: CCAGAGGTTCACCATAGACAAGTACTTGAAACGATA...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS-3UTR CAA 90 bp | ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTGGACGATATAACTaGAGAGCTTCTTTATACAAG | + |
Preference number: 5 (lower is better) Translates to: TKTIPTIMEKHFFGAGLQSGRYN*RASLYK Trigger: CTTGTATAAAGAAGCTCTCAAGTTATATCGTCCAGA...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 72 bp | CTGCGGTCGTCCCAGGGCAAGGCATTCTCAGGCAACTaGACCGGAAAGGCTGTTGGCCTGCCTTCTGAGCCG | + |
Preference number: 6 (lower is better) Translates to: LRSSQGKAFSGN*TGKAVGLPSEP Trigger: CGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGTGCAGTTGCCTGAGAATGCCTTGCCCTGGGACGACCGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 90 bp | CGTCCCAGGGCAAGGCATTCTCAGGCAACTGCACCGGAAAGGCTGTaGGCCTGCCTTCTGAGCCGTGGAACTGGGTCTGCTTACTGCCCC | + |
Preference number: 6 (lower is better) Translates to: RPRARHSQATAPERL*ACLLSRGTGSAYCP Trigger: GGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGTGCAGTTGCCTGAGAATGCCTTGCCCTGGGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | CACGGCGTCACCGGGTCCCACAGCAGAGACACGATCTaGTTCTTCCCAGTGGTGCTGAAGGGCAGGCTTTGC | + |
Preference number: 6 (lower is better) Translates to: HGVTGSHSRDTI*FFPVVLKGRLC Trigger: GCAAAGCCTGCCCTTCAGCACCACTGGGAAGAACCAGATCGTGTCTCTGCTGTGGGACCCGGTGACGCCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 90 bp | CTCTGGGCCATGGGCCACCTCGTGATCCACATGGACCTGTGGTGCTaGCCTCCTGAGCGCTCGAACCACCTGCAAGCGGTTTTTATGGCG | + |
Preference number: 6 (lower is better) Translates to: LWAMGHLVIHMDLWC*PPERSNHLQAVFMA Trigger: CGCCATAAAAACCGCTTGCAGGTGGTTCGAGCGCTCAGGAGGCAAGCACCACAGGTCCATGTGGATCACGAGGTGGCCCATGGCCCAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 72 bp | GAGAAGAGGTCTGACTCTGGGCCATGGGCCACCTCGTaGTCCACATGGACCTGTGGTGCTTGCCTCCTGAGC | + |
Preference number: 6 (lower is better) Translates to: EKRSDSGPWATS*STWTCGACLLS Trigger: GCTCAGGAGGCAAGCACCACAGGTCCATGTGGATCACGAGGTGGCCCATGGCCCAGAGTCAGACCTCTTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | AAGCCAGGGCGGGCCCCAGTCCTGGCACAGACTCACTaGTTGACTGCAAGGCAAACTCTCGGTTCCATACGC | + |
Preference number: 6 (lower is better) Translates to: KPGRAPVLAQTH*LTARQTLGSIR Trigger: GCGTATGGAACCGAGAGTTTGCCTTGCAGTCAACCAGTGAGTCTGTGCCAGGACTGGGGCCCGCCCTGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 72 bp | ATGGGCCACCTCGTGATCCACATGGACCTGTGGTGCTaGCCTCCTGAGCGCTCGAACCACCTGCAAGCGGTT | + |
Preference number: 6 (lower is better) Translates to: MGHLVIHMDLWC*PPERSNHLQAV Trigger: AACCGCTTGCAGGTGGTTCGAGCGCTCAGGAGGCAAGCACCACAGGTCCATGTGGATCACGAGGTGGCCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 90 bp | GTTTCCAAGCCAGGGCGGGCCCCAGTCCTGGCACAGACTCACTGGTaGACTGCAAGGCAAACTCTCGGTTCCATACGCGGATCTTCCGAG | + |
Preference number: 6 (lower is better) Translates to: VSKPGRAPVLAQTHW*TARQTLGSIRGSSE Trigger: CTCGGAAGATCCGCGTATGGAACCGAGAGTTTGCCTTGCAGTCAACCAGTGAGTCTGTGCCAGGACTGGGGCCCGCCCTGGCTTGGAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 72 bp | CCAGAAGAGCCAGGCCCTCCAGAGGACTCCCTTCTTTaGGGCTATGCTTCTTGCGCTCTGCCTTCCGACGGT | + |
Preference number: 6 (lower is better) Translates to: PEEPGPPEDSLL*GYASCALPSDG Trigger: ACCGTCGGAAGGCAGAGCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTCTGGAGGGCCTGGCTCTTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | TGCACCGGAAAGGCTGTTGGCCTGCCTTCTGAGCCGTaGAACTGGGTCTGCTTACTGCCCCATCCAACAGTG | + |
Preference number: 6 (lower is better) Translates to: CTGKAVGLPSEP*NWVCLLPHPTV Trigger: CACTGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | TCACAGCATAGATACCGCCAGCCCGTACAGAGAACATaGAGTCGACACGGCGTCACCGGGTCCCACAGCAGA | + |
Preference number: 6 (lower is better) Translates to: SQHRYRQPVQRT*SRHGVTGSHSR Trigger: TCTGCTGTGGGACCCGGTGACGCCGTGTCGACTCCATGTTCTCTGTACGGGCTGGCGGTATCTATGCTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 72 bp | GCAAGGCATTCTCAGGCAACTGCACCGGAAAGGCTGTaGGCCTGCCTTCTGAGCCGTGGAACTGGGTCTGCT | + |
Preference number: 6 (lower is better) Translates to: ARHSQATAPERL*ACLLSRGTGSA Trigger: AGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGTGCAGTTGCCTGAGAATGCCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 72 bp | TCCAGAAGAGCCAGGCCCTCCAGAGGACTCCCTTCTTaGAGGCTATGCTTCTTGCGCTCTGCCTTCCGACGG | + |
Preference number: 6 (lower is better) Translates to: SRRARPSRGLPS*RLCFLRSAFRR Trigger: CCGTCGGAAGGCAGAGCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTCTGGAGGGCCTGGCTCTTCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | AGCAAAATACTGCCCATCCCCACGCCAGGTAATGTGTaGTCTGCGGTCGTCCCAGGGCAAGGCATTCTCAGG | + |
Preference number: 6 (lower is better) Translates to: SKILPIPTPGNV*SAVVPGQGILR Trigger: CCTGAGAATGCCTTGCCCTGGGACGACCGCAGACCACACATTACCTGGCGTGGGGATGGGCAGTATTTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | ATGTGGGATCAGCAGCCGGTAGGTACACATGGGAGGTaGGACGACCGTCTGCCGAAAGACTGTCACCAACAC | + |
Preference number: 6 (lower is better) Translates to: MWDQQPVGTHGR*DDRLPKDCHQH Trigger: GTGTTGGTGACAGTCTTTCGGCAGACGGTCGTCCCACCTCCCATGTGTACCTACCGGCTGCTGATCCCACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | TCACTGGATGTGGGATCAGCAGCCGGTAGGTACACATaGGAGGTGGGACGACCGTCTGCCGAAAGACTGTCA | + |
Preference number: 6 (lower is better) Translates to: SLDVGSAAGRYT*EVGRPSAERLS Trigger: TGACAGTCTTTCGGCAGACGGTCGTCCCACCTCCCATGTGTACCTACCGGCTGCTGATCCCACATCCAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 90 bp | CTCAGCGCCTCCAGAAGAGCCAGGCCCTCCAGAGGACTCCCTTCTTaGAGGCTATGCTTCTTGCGCTCTGCCTTCCGACGGTTTTTAGAT | + |
Preference number: 6 (lower is better) Translates to: LSASRRARPSRGLPS*RLCFLRSAFRRFLD Trigger: ATCTAAAAACCGTCGGAAGGCAGAGCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTCTGGAGGGCCTGGCTCTTCTGGAGGCGCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 72 bp | GGTGCTCCTGCATCAGGTGCTCGCCATAAGCCATGCTaGCCGCCTGGTACTGTGGTGAGTCTGGACGATATA | + |
Preference number: 6 (lower is better) Translates to: GAPASGARHKPC*PPGTVVSLDDI Trigger: TATATCGTCCAGACTCACCACAGTACCAGGCGGTCAGCATGGCTTATGGCGAGCACCTGATGCAGGAGCACC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 72 bp | GCTGTTGGCCTGCCTTCTGAGCCGTGGAACTGGGTCTaGTTACTGCCCCATCCAACAGTGACAAACTTGCCT | + |
Preference number: 6 (lower is better) Translates to: AVGLPSEPWNWV*LLPHPTVTNLP Trigger: AGGCAAGTTTGTCACTGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 72 bp | ACTCTGTTGGCCGGCAGGAGTCCAGATCTCTGGAACTaGCCTCTCCATCAGCTGCAGAGTACTCTCAAAGGC | + |
Preference number: 6 (lower is better) Translates to: TLLAGRSPDLWN*PLHQLQSTLKG Trigger: GCCTTTGAGAGTACTCTGCAGCTGATGGAGAGGGCAGTTCCAGAGATCTGGACTCCTGCCGGCCAACAGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | GGAAAGGCTGTTGGCCTGCCTTCTGAGCCGTGGAACTaGGTCTGCTTACTGCCCCATCCAACAGTGACAAAC | + |
Preference number: 6 (lower is better) Translates to: GKAVGLPSEPWN*VCLLPHPTVTN Trigger: GTTTGTCACTGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | GCTCAGCTTCCACTGGCTTCTCGGGTCCATCTTCGGTaGCATATAAACCCCAGCATCGAGAGCAGGGACACA | + |
Preference number: 6 (lower is better) Translates to: AQLPLASRVHLR*HINPSIESRDT Trigger: TGTGTCCCTGCTCTCGATGCTGGGGTTTATATGCCACCGAAGATGGACCCGAGAAGCCAGTGGAAGCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 72 bp | ACACTCCCAACACATTCCAGCTGCTGTGTGCTGAGATaGCAGACTATGACGTCCCCAGAGGCGGTGGCCACA | + |
Preference number: 6 (lower is better) Translates to: TLPTHSSCCVLR*QTMTSPEAVAT Trigger: TGTGGCCACCGCCTCTGGGGACGTCATAGTCTGCAATCTCAGCACACAGCAGCTGGAATGTGTTGGGAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 90 bp | CAGAGACACGATCTGGTTCTTCCCAGTGGTGCTGAAGGGCAGGCTTaGCTTCAGATACCAGTGATAGTTCCCCACGGTCCAGAGCTGGAC | + |
Preference number: 6 (lower is better) Translates to: QRHDLVLPSGAEGQA*LQIPVIVPHGPELD Trigger: GTCCAGCTCTGGACCGTGGGGAACTATCACTGGTATCTGAAGCAAAGCCTGCCCTTCAGCACCACTGGGAAGAACCAGATCGTGTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 72 bp | GCCACTCATAATACTGCTGGTTTCCGAGAAGAGGTCTaGCTCTGGGCCATGGGCCACCTCGTGATCCACATG | + |
Preference number: 6 (lower is better) Translates to: ATHNTAGFREEV*LWAMGHLVIHM Trigger: CATGTGGATCACGAGGTGGCCCATGGCCCAGAGTCAGACCTCTTCTCGGAAACCAGCAGTATTATGAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 72 bp | ACCTGTGGTGCTTGCCTCCTGAGCGCTCGAACCACCTaGAAGCGGTTTTTATGGCGAATGAATGTGGCTGTC | + |
Preference number: 6 (lower is better) Translates to: TCGACLLSARTT*KRFLWRMNVAV Trigger: GACAGCCACATTCATTCGCCATAAAAACCGCTTGCAGGTGGTTCGAGCGCTCAGGAGGCAAGCACCACAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 72 bp | GCCAGGCCCTCCAGAGGACTCCCTTCTTTGAGGCTATaGTTCTTGCGCTCTGCCTTCCGACGGTTTTTAGAT | + |
Preference number: 6 (lower is better) Translates to: ARPSRGLPSLRL*FLRSAFRRFLD Trigger: ATCTAAAAACCGTCGGAAGGCAGAGCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTCTGGAGGGCCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | CCAAGTCATTGGCACTATTCCCAGAGCTCCGATCAGTaGTCCAGTGCCAGTCACAGCATAGATACCGCCAGC | + |
Preference number: 6 (lower is better) Translates to: PSHWHYSQSSDQ*SSASHSIDTAS Trigger: GCTGGCGGTATCTATGCTGTGACTGGCACTGGACCACTGATCGGAGCTCTGGGAATAGTGCCAATGACTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 90 bp | AGAGCCAGGCCCTCCAGAGGACTCCCTTCTTTGAGGCTATGCTTCTaGCGCTCTGCCTTCCGACGGTTTTTAGATGACCTCGCAGATATC | + |
Preference number: 6 (lower is better) Translates to: RARPSRGLPSLRLCF*RSAFRRFLDDLADI Trigger: GATATCTGCGAGGTCATCTAAAAACCGTCGGAAGGCAGAGCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTCTGGAGGGCCTGGCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 72 bp | GTTCCACAGCCAGAGAAGGTGACTCCCAAAGGTACTTaGGCACCTGGCCATCAGCCAGCTGTACTGCTAATG | + |
Preference number: 6 (lower is better) Translates to: VPQPEKVTPKGT*APGHQPAVLLM Trigger: CATTAGCAGTACAGCTGGCTGATGGCCAGGTGCTCAAGTACCTTTGGGAGTCACCTTCTCTGGCTGTGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | ACTCCATCCACTGTCACAGACGAACTGACATCCAGCTaGCCTTGCTCCTCATCCACCTCAGAATGGGTCACA | + |
Preference number: 6 (lower is better) Translates to: TPSTVTDELTSS*PCSSSTSEWVT Trigger: TGTGACCCATTCTGAGGTGGATGAGGAGCAAGGCCAGCTGGATGTCAGTTCGTCTGTGACAGTGGATGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | GCCAGAGAAGGTGACTCCCAAAGGTACTTGAGCACCTaGCCATCAGCCAGCTGTACTGCTAATGACTTGGTC | + |
Preference number: 6 (lower is better) Translates to: AREGDSQRYLST*PSASCTANDLV Trigger: GACCAAGTCATTAGCAGTACAGCTGGCTGATGGCCAGGTGCTCAAGTACCTTTGGGAGTCACCTTCTCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | GTGAACCCCTTTCCACTTTCCGCAGAATTTCTCCACTaGCCTCATGACTGCCACTCAGAGCTGCCTGTAGCA | + |
Preference number: 6 (lower is better) Translates to: VNPFPLSAEFLH*PHDCHSELPVA Trigger: TGCTACAGGCAGCTCTGAGTGGCAGTCATGAGGCCAGTGGAGAAATTCTGCGGAAAGTGGAAAGGGGTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 72 bp | GGTTCCACAGCCAGAGAAGGTGACTCCCAAAGGTACTaGAGCACCTGGCCATCAGCCAGCTGTACTGCTAAT | + |
Preference number: 6 (lower is better) Translates to: GSTAREGDSQRY*STWPSASCTAN Trigger: ATTAGCAGTACAGCTGGCTGATGGCCAGGTGCTCAAGTACCTTTGGGAGTCACCTTCTCTGGCTGTGGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 72 bp | CCCTCCAGAGGACTCCCTTCTTTGAGGCTATGCTTCTaGCGCTCTGCCTTCCGACGGTTTTTAGATGACCTC | + |
Preference number: 6 (lower is better) Translates to: PSRGLPSLRLCF*RSAFRRFLDDL Trigger: GAGGTCATCTAAAAACCGTCGGAAGGCAGAGCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTCTGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 72 bp | TCCACTGTCACAGACGAACTGACATCCAGCTGGCCTTaGTCCTCATCCACCTCAGAATGGGTCACAGTCAAA | + |
Preference number: 6 (lower is better) Translates to: STVTDELTSSWP*SSSTSEWVTVK Trigger: TTTGACTGTGACCCATTCTGAGGTGGATGAGGAGCAAGGCCAGCTGGATGTCAGTTCGTCTGTGACAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | AGGTCAAGTTTCTTCCCATCAGGATGTGTGGACACCTaGACACTCTTGGTAATCGGGGGAGGGTACATGGTC | + |
Preference number: 6 (lower is better) Translates to: RSSFFPSGCVDT*TLLVIGGGYMV Trigger: GACCATGTACCCTCCCCCGATTACCAAGAGTGTCCAGGTGTCCACACATCCTGATGGGAAGAAACTTGACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | CTCCTGAGCGCTCGAACCACCTGCAAGCGGTTTTTATaGCGAATGAATGTGGCTGTCTCAGAGTCCAGAAAG | + |
Preference number: 6 (lower is better) Translates to: LLSARTTCKRFL*RMNVAVSESRK Trigger: CTTTCTGGACTCTGAGACAGCCACATTCATTCGCCATAAAAACCGCTTGCAGGTGGTTCGAGCGCTCAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 72 bp | ATCCACTGTCACAGACGAACTGACATCCAGCTGGCCTaGCTCCTCATCCACCTCAGAATGGGTCACAGTCAA | + |
Preference number: 6 (lower is better) Translates to: IHCHRRTDIQLA*LLIHLRMGHSQ Trigger: TTGACTGTGACCCATTCTGAGGTGGATGAGGAGCAAGGCCAGCTGGATGTCAGTTCGTCTGTGACAGTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 90 bp | GTCGAGGACAGCAAGGTCATTCCCAAGGTGAGCAGAGAATATGACTaGATTCACTGGATGTGGGATCAGCAGCCGGTAGGTACACATGGG | + |
Preference number: 6 (lower is better) Translates to: VEDSKVIPKVSREYD*IHWMWDQQPVGTHG Trigger: CCCATGTGTACCTACCGGCTGCTGATCCCACATCCAGTGAATCAAGTCATATTCTCTGCTCACCTTGGGAATGACCTTGCTGTCCTCGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 72 bp | GCGCTCGAACCACCTGCAAGCGGTTTTTATGGCGAATaGATGTGGCTGTCTCAGAGTCCAGAAAGTCCATGT | + |
Preference number: 6 (lower is better) Translates to: ALEPPASGFYGE*MWLSQSPESPC Trigger: ACATGGACTTTCTGGACTCTGAGACAGCCACATTCATTCGCCATAAAAACCGCTTGCAGGTGGTTCGAGCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 72 bp | TCTGTTTGTCGACAAACAACACTCACAGCAAAATACTaGCCATCCCCACGCCAGGTAATGTGTGGTCTGCGG | + |
Preference number: 6 (lower is better) Translates to: SVCRQTTLTAKY*PSPRQVMCGLR Trigger: CCGCAGACCACACATTACCTGGCGTGGGGATGGGCAGTATTTTGCTGTGAGTGTTGTTTGTCGACAAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 72 bp | GGAGTCCAGATCTCTGGAACTGCCCTCTCCATCAGCTaGAGAGTACTCTCAAAGGCTCTCTGTAACTCCTTT | + |
Preference number: 6 (lower is better) Translates to: GVQISGTALSIS*RVLSKALCNSF Trigger: AAAGGAGTTACAGAGAGCCTTTGAGAGTACTCTGCAGCTGATGGAGAGGGCAGTTCCAGAGATCTGGACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | TCCCCACGGTCCAGAGCTGGACATAGCTTTTCAGAGTaGAACTGTCTTCCTTTGGGAGGTCTTCTAGCCATA | + |
Preference number: 6 (lower is better) Translates to: SPRSRAGHSFSE*NCLPLGGLLAI Trigger: TATGGCTAGAAGACCTCCCAAAGGAAGACAGTTCCACTCTGAAAAGCTATGTCCAGCTCTGGACCGTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | AAGGTGAGCAGAGAATATGACTTGATTCACTGGATGTaGGATCAGCAGCCGGTAGGTACACATGGGAGGTGG | + |
Preference number: 6 (lower is better) Translates to: KVSREYDLIHWM*DQQPVGTHGRW Trigger: CCACCTCCCATGTGTACCTACCGGCTGCTGATCCCACATCCAGTGAATCAAGTCATATTCTCTGCTCACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 72 bp | TTCTTCCCATCAGGATGTGTGGACACCTGGACACTCTaGGTAATCGGGGGAGGGTACATGGTCTTTGTGACA | + |
Preference number: 6 (lower is better) Translates to: FFPSGCVDTWTL*VIGGGYMVFVT Trigger: TGTCACAAAGACCATGTACCCTCCCCCGATTACCAAGAGTGTCCAGGTGTCCACACATCCTGATGGGAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 90 bp | ACCAACACCCTGTTTCCATCAATAACAGCCACATTTGCCAAGTCATaGGCACTATTCCCAGAGCTCCGATCAGTGGTCCAGTGCCAGTCA | + |
Preference number: 6 (lower is better) Translates to: TNTLFPSITATFAKS*ALFPELRSVVQCQS Trigger: TGACTGGCACTGGACCACTGATCGGAGCTCTGGGAATAGTGCCAATGACTTGGCAAATGTGGCTGTTATTGATGGAAACAGGGTGTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 90 bp | AGGTCAAGTTTCTTCCCATCAGGATGTGTGGACACCTGGACACTCTaGGTAATCGGGGGAGGGTACATGGTCTTTGTGACATCTTCTTCC | + |
Preference number: 6 (lower is better) Translates to: RSSFFPSGCVDTWTL*VIGGGYMVFVTSSS Trigger: GGAAGAAGATGTCACAAAGACCATGTACCCTCCCCCGATTACCAAGAGTGTCCAGGTGTCCACACATCCTGATGGGAAGAAACTTGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 72 bp | CAAGAAGCAGCAGTTCTTGATCAGGACTCCAGCTCATaGCAGAGATACCACTGGCCACACTCCCAACACATT | + |
Preference number: 6 (lower is better) Translates to: QEAAVLDQDSSS*QRYHWPHSQHI Trigger: AATGTGTTGGGAGTGTGGCCAGTGGTATCTCTGTCATGAGCTGGAGTCCTGATCAAGAACTGCTGCTTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 72 bp | AAGCTTTGTGTCCTGGGGAACAACTGTCACGATCCGTaGACCCCTTTCCACTTTCCGCAGAATTTCTCCACT | + |
Preference number: 6 (lower is better) Translates to: KLCVLGNNCHDP*TPFHFPQNFST Trigger: AGTGGAGAAATTCTGCGGAAAGTGGAAAGGGGTTCACGGATCGTGACAGTTGTTCCCCAGGACACAAAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 72 bp | ATGCTTCTTGCGCTCTGCCTTCCGACGGTTTTTAGATaGCCTCGCAGATATCCTGGAGTTACTGTGGGAGTA | + |
Preference number: 6 (lower is better) Translates to: MLLALCLPTVFR*PRRYPGVTVGV Trigger: TACTCCCACAGTAACTCCAGGATATCTGCGAGGTCATCTAAAAACCGTCGGAAGGCAGAGCGCAAGAAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | ATTCCCAAGGTGAGCAGAGAATATGACTTGATTCACTaGATGTGGGATCAGCAGCCGGTAGGTACACATGGG | + |
Preference number: 6 (lower is better) Translates to: IPKVSREYDLIH*MWDQQPVGTHG Trigger: CCCATGTGTACCTACCGGCTGCTGATCCCACATCCAGTGAATCAAGTCATATTCTCTGCTCACCTTGGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | GCTTATCACCACACTTGTAGACAGAAATCTGGTTACTaGCGTCGAGGACAGCAAGGTCATTCCCAAGGTGAG | + |
Preference number: 6 (lower is better) Translates to: AYHHTCRQKSGY*RRGQQGHSQGE Trigger: CTCACCTTGGGAATGACCTTGCTGTCCTCGACGCCAGTAACCAGATTTCTGTCTACAAGTGTGGTGATAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | TTTCCCCTTGGCATCTGTAGTATAAGCTTTGTGTCCTaGGGAACAACTGTCACGATCCGTGAACCCCTTTCC | + |
Preference number: 6 (lower is better) Translates to: FPLGICSISFVS*GTTVTIREPLS Trigger: GGAAAGGGGTTCACGGATCGTGACAGTTGTTCCCCAGGACACAAAGCTTATACTACAGATGCCAAGGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 72 bp | AGCAAGGTCATTCCCAAGGTGAGCAGAGAATATGACTaGATTCACTGGATGTGGGATCAGCAGCCGGTAGGT | + |
Preference number: 6 (lower is better) Translates to: SKVIPKVSREYD*IHWMWDQQPVG Trigger: ACCTACCGGCTGCTGATCCCACATCCAGTGAATCAAGTCATATTCTCTGCTCACCTTGGGAATGACCTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 90 bp | AGGTACTTGAGCACCTGGCCATCAGCCAGCTGTACTGCTAATGACTaGGTCTTAGAACAGCAGCATAAACCAATGACGACTCCATCCACT | + |
Preference number: 6 (lower is better) Translates to: RYLSTWPSASCTAND*VLEQQHKPMTTPST Trigger: AGTGGATGGAGTCGTCATTGGTTTATGCTGCTGTTCTAAGACCAAGTCATTAGCAGTACAGCTGGCTGATGGCCAGGTGCTCAAGTACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 72 bp | CTTTCCACTTTCCGCAGAATTTCTCCACTGGCCTCATaGCTGCCACTCAGAGCTGCCTGTAGCATTTTAAGT | + |
Preference number: 6 (lower is better) Translates to: LSTFRRISPLAS*LPLRAACSILS Trigger: ACTTAAAATGCTACAGGCAGCTCTGAGTGGCAGTCATGAGGCCAGTGGAGAAATTCTGCGGAAAGTGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 72 bp | AGCACAATTTCCAGCTCCGGGGTGGTTTTCTTCACATaGGATGTGAGTATCGACAGGCAGAACTTTCGAGGA | + |
Preference number: 6 (lower is better) Translates to: STISSSGVVFFT*DVSIDRQNFRG Trigger: TCCTCGAAAGTTCTGCCTGTCGATACTCACATCTCATGTGAAGAAAACCACCCCGGAGCTGGAAATTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 72 bp | CACCAACACCCTGTTTCCATCAATAACAGCCACATTTaGCAAGTCATTGGCACTATTCCCAGAGCTCCGATC | + |
Preference number: 6 (lower is better) Translates to: HQHPVSINNSHI*QVIGTIPRAPI Trigger: GATCGGAGCTCTGGGAATAGTGCCAATGACTTGGCAAATGTGGCTGTTATTGATGGAAACAGGGTGTTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | CAGTCAGACCAAGGACACATTCCTCTCCTCCAATCGTaGCTACTTCCATCTGTGTGCATGGATGAACAAATC | + |
Preference number: 6 (lower is better) Translates to: QSDQGHIPLLQS*LLPSVCMDEQI Trigger: GATTTGTTCATCCATGCACACAGATGGAAGTAGCCACGATTGGAGGAGAGGAATGTGTCCTTGGTCTGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | AGCATTTTAAGTGAGGCACCACTTAGGGAGAAAACCTaGCAGGTGTGGGAATGGGTTGTCACCAGTAGAAAG | + |
Preference number: 6 (lower is better) Translates to: SILSEAPLREKT*QVWEWVVTSRK Trigger: CTTTCTACTGGTGACAACCCATTCCCACACCTGCCAGGTTTTCTCCCTAAGTGGTGCCTCACTTAAAATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 72 bp | CACTTAGGGAGAAAACCTGGCAGGTGTGGGAATGGGTaGTCACCAGTAGAAAGTCATCACACACAGCAAATG | + |
Preference number: 6 (lower is better) Translates to: HLGRKPGRCGNG*SPVESHHTQQM Trigger: CATTTGCTGTGTGTGATGACTTTCTACTGGTGACAACCCATTCCCACACCTGCCAGGTTTTCTCCCTAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 72 bp | TTTAAACATAAGTTTGTCCAGCCACTTCCGAATCTGTaGCAAGACCAAGGCCCGATGATGAACAACCTCCAG | + |
Preference number: 6 (lower is better) Translates to: FKHKFVQPLPNL*QDQGPMMNNLQ Trigger: CTGGAGGTTGTTCATCATCGGGCCTTGGTCTTGGCACAGATTCGGAAGTGGCTGGACAAACTTATGTTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 72 bp | ACACTCACACTCTCAGGATCAAAGGGAAGATTTCCTTaGAGTTCCTGTACCTTCTGCAGCACAATTTCCAGC | + |
Preference number: 6 (lower is better) Translates to: TLTLSGSKGRFP*SSCTFCSTISS Trigger: GCTGGAAATTGTGCTGCAGAAGGTACAGGAACTTCAAGGAAATCTTCCCTTTGATCCTGAGAGTGTGAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 72 bp | ATTCCTCTCCTCCAATCGTGGCTACTTCCATCTGTGTaGATGGATGAACAAATCGAACAGGAATTCCTTCAG | + |
Preference number: 6 (lower is better) Translates to: IPLLQSWLLPSV*MDEQIEQEFLQ Trigger: CTGAAGGAATTCCTGTTCGATTTGTTCATCCATGCACACAGATGGAAGTAGCCACGATTGGAGGAGAGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | TTTTTAGATGACCTCGCAGATATCCTGGAGTTACTGTaGGAGTATCTGCCACTCATCTCACTGCCACTCATA | + |
Preference number: 6 (lower is better) Translates to: FLDDLADILELL*EYLPLISLPLI Trigger: TATGAGTGGCAGTGAGATGAGTGGCAGATACTCCCACAGTAACTCCAGGATATCTGCGAGGTCATCTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 72 bp | GCTGCAGAGTACTCTCAAAGGCTCTCTGTAACTCCTTaGCTTGCTCTTCAAACTCAAAGAGAAAGAGCACCT | + |
Preference number: 6 (lower is better) Translates to: AAEYSQRLSVTP*LALQTQRERAP Trigger: AGGTGCTCTTTCTCTTTGAGTTTGAAGAGCAAGCAAAGGAGTTACAGAGAGCCTTTGAGAGTACTCTGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 72 bp | CCTCCAATCGTGGCTACTTCCATCTGTGTGCATGGATaGACAAATCGAACAGGAATTCCTTCAGAATTCTTC | + |
Preference number: 6 (lower is better) Translates to: PPIVATSICVHG*TNRTGIPSEFF Trigger: GAAGAATTCTGAAGGAATTCCTGTTCGATTTGTTCATCCATGCACACAGATGGAAGTAGCCACGATTGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 72 bp | GCCTTCTCCAAAATCATCCTGGTGGATCTGCTCCTCTaGGATCACTTCAAAGTCTTTTGTCATCATAATCAG | + |
Preference number: 6 (lower is better) Translates to: AFSKIILVDLLL*DHFKVFCHHNQ Trigger: CTGATTATGATGACAAAAGACTTTGAAGTGATCGCAGAGGAGCAGATCCACCAGGATGATTTTGGAGAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CCA 72 bp | CTCTCCTCCAATCGTGGCTACTTCCATCTGTGTGCATaGATGAACAAATCGAACAGGAATTCCTTCAGAATT | + |
Preference number: 6 (lower is better) Translates to: LSSNRGYFHLCA*MNKSNRNSFRI Trigger: AATTCTGAAGGAATTCCTGTTCGATTTGTTCATCCATGCACACAGATGGAAGTAGCCACGATTGGAGGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 72 bp | AATGCAGCCACTTCCATCCTCTGGAAGAAAACCTTCTaGCACCAAAGAAATTTCAGTCTTCACTTCTCTTCT | + |
Preference number: 6 (lower is better) Translates to: NAATSILWKKTF*HQRNFSLHFSS Trigger: AGAAGAGAAGTGAAGACTGAAATTTCTTTGGTGGCAGAAGGTTTTCTTCCAGAGGATGGAAGTGGCTGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS GCA 72 bp | AAAGTGTCGTCTTCAACCCAGGTGAGAAAGCTCAACTaGAGTGCGTTTACTTCTTCTTCTTCTTCTTCTTCA | + |
Preference number: 6 (lower is better) Translates to: KVSSSTQVRKLN*SAFTSSSSSSS Trigger: TGAAGAAGAAGAAGAAGAAGAAGTAAACGCACTGCAGTTGAGCTTTCTCACCTGGGTTGAAGACGACACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS TCA 72 bp | TCCACATTTTCGAGAAAGACCTTGGGGTTATGGTCATaGATCAGATTGAGGTTAATTCTCAGTTTCCTCATG | + |
Preference number: 6 (lower is better) Translates to: STFSRKTLGLWS*IRLRLILSFLM Trigger: CATGAGGAAACTGAGAATTAACCTCAATCTGATTCATGACCATAACCCCAAGGTCTTTCTCGAAAATGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |
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CDS CAA 72 bp | ACCGCCTGGTACTGTGGTGAGTCTGGACGATATAACTaGAGAGCTTCTTTATACAAGTTTTTATCTTTTATC | + |
Preference number: 6 (lower is better) Translates to: TAWYCGESGRYN*RASLYKFLSFI Trigger: GATAAAAGATAAAAACTTGTATAAAGAAGCTCTCAAGTTATATCGTCCAGACTCACCACAGTACCAGGCGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030140.3 |