RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ELP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028431

Ensembl transcript IDs: ENSMUST00000030140.3

Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTTTGGGGGACAGAGTAACAACCAACCCTGCTCCCACATATGCCTaGTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCT +
Preference number: 1 (lower is better)
Translates to: CLGDRVTTNPAPTYA*CLPITEVHPTLGNS
Trigger: AGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGCAGGGTTGGTTGTTACTCTGTCCCCCAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR TCA 90 bp CTAAGATGTATACCCAAAAGAAAGTGGGGACTGCCTAGTGCTAGCTaGGGCTGTTCAAAGGCAGACTCTTCCACATCCCAGTTCTCCACA +
Preference number: 1 (lower is better)
Translates to: LRCIPKRKWGLPSAS*GCSKADSSTSQFST
Trigger: TGTGGAGAACTGGGATGTGGAAGAGTCTGCCTTTGAACAGCCTCAGCTAGCACTAGGCAGTCCCCACTTTCTTTTGGGTATACATCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR TCA 90 bp TGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTaGAATCCGAAGAGGACGTTAGATCGTCTAGAACTGGAGAAAACA +
Preference number: 1 (lower is better)
Translates to: CLHICLCTTCLPGAQ*NPKRTLDRLELEKT
Trigger: TGTTTTCTCCAGTTCTAGACGATCTAACGTCCTCTTCGGATTTCACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR GCA 90 bp ATTATTGTCATGGCAGGAAGCATGGCAGCCTGCAGGCAGAAACAGTaGTGTACAAGGCAAGAGTTCTATCTTGATCAGAAGTTAGCAGCA +
Preference number: 1 (lower is better)
Translates to: IIVMAGSMAACRQKQ*CTRQEFYLDQKLAA
Trigger: TGCTGCTAACTTCTGATCAAGATAGAACTCTTGCCTTGTACAGCACTGTTTCTGCCTGCAGGCTGCCATGCTTCCTGCCATGACAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR GCA 90 bp GAGCTGTCCAAGGTTGTAACAGAAACGAGACTCCAGTTCATGATCTaGCTAACCATGCTTTCAAACAGTACTGAGTACAAGAACAGCAGG +
Preference number: 1 (lower is better)
Translates to: ELSKVVTETRLQFMI*LTMLSNSTEYKNSR
Trigger: CCTGCTGTTCTTGTACTCAGTACTGTTTGAAAGCATGGTTAGGCAGATCATGAACTGGAGTCTCGTTTCTGTTACAACCTTGGACAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR CCA 90 bp GGGTTTCATTGCTATGAAGAGACACCAAGACCATACCAACTATCATaGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTA +
Preference number: 1 (lower is better)
Translates to: GFHCYEETPRPYQLS*RNISLGLAYSLRGL
Trigger: TAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGTGTCTCTTCATAGCAATGAAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR GCA 90 bp TTTACCACTGAGTCAATTCTCCAGTCCCCAAACAGCTTTTTATTCTaGTTTGAGTTAATGCACAGATGCCAGCTATGCAATCACATCTTA +
Preference number: 1 (lower is better)
Translates to: FTTESILQSPNSFLF*FELMHRCQLCNHIL
Trigger: TAAGATGTGATTGCATAGCTGGCATCTGTGCATTAACTCAAAGCAGAATAAAAAGCTGTTTGGGGACTGGAGAATTGACTCAGTGGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR GCA 90 bp TTGGAAACAATGAAACATGGGTCAGTCAATGTCTTAGGGTTTCATTaGTATGAAGAGACACCAAGACCATACCAACTATCATGGAGAAAC +
Preference number: 1 (lower is better)
Translates to: LETMKHGSVNVLGFH*YEETPRPYQLSWRN
Trigger: GTTTCTCCATGATAGTTGGTATGGTCTTGGTGTCTCTTCATAGCAATGAAACCCTAAGACATTGACTGACCCATGTTTCATTGTTTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR TCA 90 bp AACAATGAAACATGGGTCAGTCAATGTCTTAGGGTTTCATTGCTATaGAGAGACACCAAGACCATACCAACTATCATGGAGAAACATTTC +
Preference number: 1 (lower is better)
Translates to: NNETWVSQCLRVSLL*RDTKTIPTIMEKHF
Trigger: GAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGTGTCTCTTCATAGCAATGAAACCCTAAGACATTGACTGACCCATGTTTCATTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR-3UTR GCA 90 bp GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGCCCAGCTTCCTGGGCTaGTGGGATTATAGGCATGTC +
Preference number: 2 (lower is better)
Translates to: DIYTNKATPNSATAHGPRPSFLG*WDYRHV
Trigger: GACATGCCTATAATCCCAGCAGCCCAGGAAGCTGGG...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR-3UTR GCA 90 bp GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGCCCTGCTCCCACATATaGCTGCTGTCTACCCATCAC +
Preference number: 2 (lower is better)
Translates to: DIYTNKATPNSATAHGPRPCSHI*LLSTHH
Trigger: GTGATGGGTAGACAGCAGGCATATGTGGGAGCAGGG...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR-3UTR TCA 90 bp GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGGCTTTCAAACAGTACTaGGTACAAGAACAGCAGGAT +
Preference number: 2 (lower is better)
Translates to: DIYTNKATPNSATAHGPRAFKQY*VQEQQD
Trigger: ATCCTGCTGTTCTTGTACTCAGTACTGTTTGAAAGC...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR-3UTR TCA 90 bp GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGAAACATCATTCCCTATaGACAACAGGAACTGAGGAT +
Preference number: 2 (lower is better)
Translates to: DIYTNKATPNSATAHGPRKHHSL*TTGTED
Trigger: ATCCTCAGTTCCTGTTGTTCATAGGGAATGATGTTT...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR-3UTR CCA 90 bp AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGTCTGCCCCAGCTTCCTaGGCTGCTGGGATTATAGGC +
Preference number: 2 (lower is better)
Translates to: SILPAHMFVYHMLAWCSVSAPAS*AAGIIG
Trigger: GCCTATAATCCCAGCAGCCCAGGAAGCTGGGGCAGA...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR-3UTR TCA 90 bp TCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTGAGTCTGCCCTGCCTAGTGCTAGCTaGGGCTGTTCAAAGGCAGAC +
Preference number: 2 (lower is better)
Translates to: SPHLMSYKKPYTKPSESALPSAS*GCSKAD
Trigger: GTCTGCCTTTGAACAGCCTCAGCTAGCACTAGGCAG...GGCAGACTCACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR-3UTR TCA 90 bp TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATACCGCTCTTTACCACTaGGTCAATTCTCCAGTCCCC +
Preference number: 2 (lower is better)
Translates to: CLPITEVHPTLGNSLAEHTALYH*VNSPVP
Trigger: GGGGACTGGAGAATTGACTCAGTGGTAAAGAGCGGT...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR-3UTR TCA 90 bp TCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTAGTCCATCAGGATGGGTTGTTTTaGGATAAGGCCATGCTGGTC +
Preference number: 2 (lower is better)
Translates to: SWRNISLGLAYSLRGLVHQDGLF*DKAMLV
Trigger: GACCAGCATGGCCTTATCTCAAAACAACCCATCCTG...ATGGACTAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR-3UTR GCA 90 bp ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGGCTCCCACATATGCCTaGTGTCTACCCATCACTGAA +
Preference number: 2 (lower is better)
Translates to: TKTIPTIMEKHFFGAGLQAPTYA*CLPITE
Trigger: TTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR-3UTR TCA 90 bp GGAAGCATGGCAGCCTGCAGGCAGAAACAGTGCTGTACAAGGCAAGAGTTCTATCTTTTTATTCTGCTTTaGGTTAATGCACAGATGCCA +
Preference number: 2 (lower is better)
Translates to: GSMAACRQKQCCTRQEFYLFILL*VNAQMP
Trigger: TGGCATCTGTGCATTAACTCAAAGCAGAATAAAAAG...ATAGAACTCTTGCCTTGTACAGCACTGTTTCTGCCTGCAGGCTGCCATGCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR-3UTR CCA 90 bp ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGATACCCAAAAGAAAGTaGGGACTGCCTAGTGCTAGC +
Preference number: 2 (lower is better)
Translates to: TKTIPTIMEKHFFGAGLQIPKRK*GLPSAS
Trigger: GCTAGCACTAGGCAGTCCCCACTTTCTTTTGGGTAT...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR-3UTR TCA 90 bp AAGATCTCAAAGCACACCTCCACAGTGACAGACTTCCTCCAACAAGGACATCTACTTGTCTTCACTTTTTaGGGTAGAAACCATGAAACA +
Preference number: 2 (lower is better)
Translates to: KISKHTSTVTDFLQQGHLLVFTF*GRNHET
Trigger: TGTTTCATGGTTTCTACCTCAAAAAGTGAAGACAAG...TAGATGTCCTTGTTGGAGGAAGTCTGTCACTGTGGAGGTGTGCTTTGAGATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR CAA 90 bp TGCACTATGTTAACAACACAGAGCAACTTAGAAACGTGGTTCCACTaGTCTTCACTTTTTGAGGTAGAAACCATGAAACATCATTCCCTA +
Preference number: 2 (lower is better)
Translates to: CTMLTTQSNLETWFH*SSLFEVETMKHHSL
Trigger: TAGGGAATGATGTTTCATGGTTTCTACCTCAAAAAGTGAAGACAAGTGGAACCACGTTTCTAAGTTGCTCTGTGTTGTTAACATAGTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR-3UTR GCA 90 bp TATGTTAACAACACAGAGCAACTTAGAAACGTGGTTCCACTTGTCTTCACTTTTCTCCAGTTCATGATCTaGCTAACCATGCTTTCAAAC +
Preference number: 2 (lower is better)
Translates to: YVNNTEQLRNVVPLVFTFLQFMI*LTMLSN
Trigger: GTTTGAAAGCATGGTTAGGCAGATCATGAACTGGAG...AAAAGTGAAGACAAGTGGAACCACGTTTCTAAGTTGCTCTGTGTTGTTAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR GCA 72 bp GAGCTGCTATGTGGGTGCTGGGAAACCCAGGTCCACTaGAAAAGCAACAACCGCTCTTTACCACTGAGTCAA +
Preference number: 3 (lower is better)
Translates to: ELLCGCWETQVH*KSNNRSLPLSQ
Trigger: TTGACTCAGTGGTAAAGAGCGGTTGTTGCTTTTGCAGTGGACCTGGGTTTCCCAGCACCCACATAGCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR GCA 72 bp CTGGAGAAAACAGACCGTTGTGAGCTGCTATGTGGGTaGTGGGAAACCCAGGTCCACTGCAAAAGCAACAAC +
Preference number: 3 (lower is better)
Translates to: LEKTDRCELLCG*WETQVHCKSNN
Trigger: GTTGTTGCTTTTGCAGTGGACCTGGGTTTCCCAGCACCCACATAGCAGCTCACAACGGTCTGTTTTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR TCA 72 bp ATACCCAAAAGAAAGTGGGGACTGCCTAGTGCTAGCTaGGGCTGTTCAAAGGCAGACTCTTCCACATCCCAG +
Preference number: 3 (lower is better)
Translates to: IPKRKWGLPSAS*GCSKADSSTSQ
Trigger: CTGGGATGTGGAAGAGTCTGCCTTTGAACAGCCTCAGCTAGCACTAGGCAGTCCCCACTTTCTTTTGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR TCA 72 bp GTTAGATCGTCTAGAACTGGAGAAAACAGACCGTTGTaGGCTGCTATGTGGGTGCTGGGAAACCCAGGTCCA +
Preference number: 3 (lower is better)
Translates to: VRSSRTGENRPL*AAMWVLGNPGP
Trigger: TGGACCTGGGTTTCCCAGCACCCACATAGCAGCTCACAACGGTCTGTTTTCTCCAGTTCTAGACGATCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR TCA 72 bp AGGATGGGTTGTTTTGAGATAAGGCCATGCTGGTCTTaGACTTGCATCAGTCTTTCTGCCCCAGCTTCCTGG +
Preference number: 3 (lower is better)
Translates to: RMGCFEIRPCWS*TCISLSAPASW
Trigger: CCAGGAAGCTGGGGCAGAAAGACTGATGCAAGTTCAAGACCAGCATGGCCTTATCTCAAAACAACCCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR TCA 72 bp ATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTaGAATCCGAAGAGGACGTTAGATCGTCTAGAACTG +
Preference number: 3 (lower is better)
Translates to: ICLCTTCLPGAQ*NPKRTLDRLEL
Trigger: CAGTTCTAGACGATCTAACGTCCTCTTCGGATTTCACTGAGCACCAGGCAAGCATGTGGTACACAAACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR TCA 72 bp GCAGAAACAGTGCTGTACAAGGCAAGAGTTCTATCTTaGTCAGAAGTTAGCAGCAGAGACTCTGCTACACTG +
Preference number: 3 (lower is better)
Translates to: AETVLYKARVLS*SEVSSRDSATL
Trigger: CAGTGTAGCAGAGTCTCTGCTGCTAACTTCTGATCAAGATAGAACTCTTGCCTTGTACAGCACTGTTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR CCA 72 bp TGCTATGAAGAGACACCAAGACCATACCAACTATCATaGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTC +
Preference number: 3 (lower is better)
Translates to: CYEETPRPYQLS*RNISLGLAYSL
Trigger: GAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGTGTCTCTTCATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR TCA 72 bp ACATGGGTCAGTCAATGTCTTAGGGTTTCATTGCTATaGAGAGACACCAAGACCATACCAACTATCATGGAG +
Preference number: 3 (lower is better)
Translates to: TWVSQCLRVSLL*RDTKTIPTIME
Trigger: CTCCATGATAGTTGGTATGGTCTTGGTGTCTCTTCATAGCAATGAAACCCTAAGACATTGACTGACCCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR TCA 72 bp TATACAGTTCCAAAATTGAGGAGGAAGCAGAGTTACTaGAAGACTGAACCAGCTAGGCAAACTCTAGACTCT +
Preference number: 3 (lower is better)
Translates to: YTVPKLRRKQSY*KTEPARQTLDS
Trigger: AGAGTCTAGAGTTTGCCTAGCTGGTTCAGTCTTTCAGTAACTCTGCTTCCTCCTCAATTTTGGAACTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
3UTR GCA 72 bp GAGTCAATTCTCCAGTCCCCAAACAGCTTTTTATTCTaGTTTGAGTTAATGCACAGATGCCAGCTATGCAAT +
Preference number: 3 (lower is better)
Translates to: ESILQSPNSFLF*FELMHRCQLCN
Trigger: ATTGCATAGCTGGCATCTGTGCATTAACTCAAAGCAGAATAAAAAGCTGTTTGGGGACTGGAGAATTGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp TCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGGTTCTGGACCTGTGGTGCTTaGCTCCTGAGCGCTCGAACC +
Preference number: 4 (lower is better)
Translates to: STPTRPRLIVPLPTGQGFWTCGA*LLSART
Trigger: GGTTCGAGCGCTCAGGAGGCAAGCACCACAGGTCCA...GAACCCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGCGTCCCCAGAGGCGGTaGCCACACACACAGATTCCT +
Preference number: 4 (lower is better)
Translates to: DIYTNKATPNSATAHGPRRPQRR*PHTQIP
Trigger: AGGAATCTGTGTGTGTGGCCACCGCCTCTGGGGACG...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp GCTGGTCTTGAACTTGCATCAGTCTTTCTGCCCCAGCTTCCTGGGCTGCTGGGAGCTGGCTCGTACAGGTaGTCCTGCATCAGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: AGLELASVFLPQLPGLLGAGSYR*SCIRCS
Trigger: CGAGCACCTGATGCAGGAGCACCTGTACGAGCCAGC...TCCCAGCAGCCCAGGAAGCTGGGGCAGAAAGACTGATGCAAGTTCAAGACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp TCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGGTTCCACAGCCAGAGAAGGTaGCTCCCAAAGGTACTTGAG +
Preference number: 4 (lower is better)
Translates to: STPTRPRLIVPLPTGQGFHSQRR*LPKVLE
Trigger: CTCAAGTACCTTTGGGAGTCACCTTCTCTGGCTGTG...GAACCCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGTTGTCTTTGGACATCTaGAGCTGGGCAGCCACACAG +
Preference number: 4 (lower is better)
Translates to: DIYTNKATPNSATAHGPRLSLDI*SWAATQ
Trigger: CTGTGTGGCTGCCCAGCTTCAGATGTCCAAAGACAA...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGACATCCAGCTGGCCTTaGTCCTCATCCACCTCAGAA +
Preference number: 4 (lower is better)
Translates to: DIYTNKATPNSATAHGPRTSSWP*SSSTSE
Trigger: TTCTGAGGTGGATGAGGAGCAAGGCCAGCTGGATGT...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp GCTGGTCTTGAACTTGCATCAGTCTTTCTGCCCCAGCTTCCTGGGCTGCTGGGAACTGTTCCAGGACTGTaGCTGCCTCACTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: AGLELASVFLPQLPGLLGTVPGL*LPHCAS
Trigger: GGAAGCACAGTGAGGCAGCCACAGTCCTGGAACAGT...TCCCAGCAGCCCAGGAAGCTGGGGCAGAAAGACTGATGCAAGTTCAAGACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp GGAAGCATGGCAGCCTGCAGGCAGAAACAGTGCTGTACAAGGCAAGAGTTCTATGCCGGTAGGTACACATaGGAGGTGGGACGACCGTCT +
Preference number: 4 (lower is better)
Translates to: GSMAACRQKQCCTRQEFYAGRYT*EVGRPS
Trigger: AGACGGTCGTCCCACCTCCCATGTGTACCTACCGGC...ATAGAACTCTTGCCTTGTACAGCACTGTTTCTGCCTGCAGGCTGCCATGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp GCTGGTCTTGAACTTGCATCAGTCTTTCTGCCCCAGCTTCCTGGGCTGCTGGGAAGGTACTTGAGCACCTaGCCATCAGCCAGCTGTACT +
Preference number: 4 (lower is better)
Translates to: AGLELASVFLPQLPGLLGRYLST*PSASCT
Trigger: AGTACAGCTGGCTGATGGCCAGGTGCTCAAGTACCT...TCCCAGCAGCCCAGGAAGCTGGGGCAGAAAGACTGATGCAAGTTCAAGACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp GCTGGTCTTGAACTTGCATCAGTCTTTCTGCCCCAGCTTCCTGGGCTGCTGGGAGTGAATGATGGACTGTaGGCTGGAGTGACTGTAGCT +
Preference number: 4 (lower is better)
Translates to: AGLELASVFLPQLPGLLGVNDGL*AGVTVA
Trigger: AGCTACAGTCACTCCAGCTCACAGTCCATCATTCAC...TCCCAGCAGCCCAGGAAGCTGGGGCAGAAAGACTGATGCAAGTTCAAGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp TCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGGTTCGTCACAGTCAAATGGTaGATGATGGACTGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: STPTRPRLIVPLPTGQGFVTVKW*MMDCEL
Trigger: CAGCTCACAGTCCATCATTCACCATTTGACTGTGAC...GAACCCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp GCTGGTCTTGAACTTGCATCAGTCTTTCTGCCCCAGCTTCCTGGGCTGCTGGGATACTGTGGGAGTATCTaGCACTCATCTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: AGLELASVFLPQLPGLLGYCGSI*HSSHCH
Trigger: GTGGCAGTGAGATGAGTGGCAGATACTCCCACAGTA...TCCCAGCAGCCCAGGAAGCTGGGGCAGAAAGACTGATGCAAGTTCAAGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTCTGCCTTCTGAGCCGTaGAACTGGGTCTGCTTACTG +
Preference number: 4 (lower is better)
Translates to: APTYACCLPITEVHPTLGLPSEP*NWVCLL
Trigger: CAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAG...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp TCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGGTTCTATGACTTGATTCACTaGATGTGGGATCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: STPTRPRLIVPLPTGQGFYDLIH*MWDQQP
Trigger: CGGCTGCTGATCCCACATCCAGTGAATCAAGTCATA...GAACCCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp GGAAGCATGGCAGCCTGCAGGCAGAAACAGTGCTGTACAAGGCAAGAGTTCTATGAACTGACATCCAGCTaGCCTTGCTCCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: GSMAACRQKQCCTRQEFYELTSS*PCSSST
Trigger: GGTGGATGAGGAGCAAGGCCAGCTGGATGTCAGTTC...ATAGAACTCTTGCCTTGTACAGCACTGTTTCTGCCTGCAGGCTGCCATGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGTCTCCACTGGCCTCATaGCTGCCACTCAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SILPAHMFVYHMLAWCSVSPLAS*LPLRAA
Trigger: GGCAGCTCTGAGTGGCAGTCATGAGGCCAGTGGAGA...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTGACTCACTGGTTGACTaGAAGGCAAACTCTCGGTTC +
Preference number: 4 (lower is better)
Translates to: APTYACCLPITEVHPTLGDSLVD*KANSRF
Trigger: GAACCGAGAGTTTGCCTTGCAGTCAACCAGTGAGTC...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTACACTGAGGTTTCCCTaGTGCCTGAATGTCCCGAAA +
Preference number: 4 (lower is better)
Translates to: APTYACCLPITEVHPTLGTLRFP*CLNVPK
Trigger: TTTCGGGACATTCAGGCACCAGGGAAACCTCAGTGT...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp GGAAGCATGGCAGCCTGCAGGCAGAAACAGTGCTGTACAAGGCAAGAGTTCTATAGGAGTCCAGATCTCTaGAACTGCCCTCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: GSMAACRQKQCCTRQEFYRSPDL*NCPLHQ
Trigger: CTGATGGAGAGGGCAGTTCCAGAGATCTGGACTCCT...ATAGAACTCTTGCCTTGTACAGCACTGTTTCTGCCTGCAGGCTGCCATGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGATCTGTGTGCATGGATaGACAAATCGAACAGGAATT +
Preference number: 4 (lower is better)
Translates to: DIYTNKATPNSATAHGPRICVHG*TNRTGI
Trigger: AATTCCTGTTCGATTTGTTCATCCATGCACACAGAT...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGCACATGGACCTGTGGTaGTTGCCTCCTGAGCGCTCG +
Preference number: 4 (lower is better)
Translates to: LAALTAYMNTMHYVNNTEHMDLW*LPPERS
Trigger: CGAGCGCTCAGGAGGCAAGCACCACAGGTCCATGTG...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGCAGGACTCCAGCTCATaGCAGAGATACCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: SILPAHMFVYHMLAWCSVQDSSS*QRYHWP
Trigger: TGGCCAGTGGTATCTCTGTCATGAGCTGGAGTCCTG...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp TATTCAAAACACTATATTCCACTCCTGGCCCCCACAGGCTTGCAGCCATACATATGCAATCAAACTGCCTaGGGGTTTCCAAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: YSKHYIPLLAPTGLQPYICNQTA*GFPSQG
Trigger: GCCCTGGCTTGGAAACCCTCAGGCAGTTTGATTGCA...TATGTATGGCTGCAAGCCTGTGGGGGCCAGGAGTGGAATATAGTGTTTTGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTGGTGAGCAGAGAATATaGCTTGATTCACTGGATGTG +
Preference number: 4 (lower is better)
Translates to: APTYACCLPITEVHPTLGGEQRI*LDSLDV
Trigger: CACATCCAGTGAATCAAGTCATATTCTCTGCTCACC...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATACTCCCAAAGGTACTTaGGCACCTGGCCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: CLPITEVHPTLGNSLAEHTPKGT*APGHQP
Trigger: TGGCTGATGGCCAGGTGCTCAAGTACCTTTGGGAGT...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATCCGTGGAACTGGGTCTaGTTACTGCCCCATCCAACA +
Preference number: 4 (lower is better)
Translates to: CLPITEVHPTLGNSLAEHPWNWV*LLPHPT
Trigger: TGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGG...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp TCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTGAGTCTGCCCCAGATCTCTGGAACTaGCCTCTCCATCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SPHLMSYKKPYTKPSESAPDLWN*PLHQLQ
Trigger: CTGCAGCTGATGGAGAGGGCAGTTCCAGAGATCTGG...GGCAGACTCACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGCAGAGCTCCGATCAGTaGTCCAGTGCCAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: TKTIPTIMEKHFFGAGLQQSSDQ*SSASHS
Trigger: GCTGTGACTGGCACTGGACCACTGATCGGAGCTCTG...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGGCCATGCTGACCGCCTaGTACTGTGGTGAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LAALTAYMNTMHYVNNTEAMLTA*YCGESG
Trigger: TCCAGACTCACCACAGTACCAGGCGGTCAGCATGGC...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGAAACACCAGCCCTGCTaGCTCGTACAGGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LAALTAYMNTMHYVNNTEKHQPC*LVQVLL
Trigger: CAGGAGCACCTGTACGAGCCAGCAGGGCTGGTGTTT...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp GACTCTGCATCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTTATTCGCAGTGGAGCTaGGACCTAGGACCGGTGTGG +
Preference number: 4 (lower is better)
Translates to: DSASPHLMSYKKPYTKPSYSQWS*DLGPVW
Trigger: CCACACCGGTCCTAGGTCCCAGCTCCACTGCGAATA...ACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGATGCAGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp GGAAGCATGGCAGCCTGCAGGCAGAAACAGTGCTGTACAAGGCAAGAGTTCTATGCAGAGAATATGACTTaGTTCACTGGATGTGGGATC +
Preference number: 4 (lower is better)
Translates to: GSMAACRQKQCCTRQEFYAENMT*FTGCGI
Trigger: GATCCCACATCCAGTGAATCAAGTCATATTCTCTGC...ATAGAACTCTTGCCTTGTACAGCACTGTTTCTGCCTGCAGGCTGCCATGCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp TCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTGAGTCTGCCAACTGTCACGATCCGTaGACCCCTTTCCACTTTCCG +
Preference number: 4 (lower is better)
Translates to: SPHLMSYKKPYTKPSESANCHDP*TPFHFP
Trigger: CGGAAAGTGGAAAGGGGTTCACGGATCGTGACAGTT...GGCAGACTCACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGGAGGACTCCCTTCTTTaGGGCTATGCTTCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: SILPAHMFVYHMLAWCSVEDSLL*GYASCA
Trigger: AGCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTC...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGGGGCTTGCTGCCAGCTaGCACAAGCCAAAAATGCTT +
Preference number: 4 (lower is better)
Translates to: SILPAHMFVYHMLAWCSVGLAAS*HKPKML
Trigger: AAGCATTTTTGGCTTGTGGCAGCTGGCAGCAAGCCC...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp TCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTAGTCCATCTCCACCAGCTTTCCTaGCAGAGTTCTAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SWRNISLGLAYSLRGLVHLHQLS*QSSSKA
Trigger: GGCCTTGCTAGAACTCTGGCAGGAAAGCTGGTGGAG...ATGGACTAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp TATTCAAAACACTATATTCCACTCCTGGCCCCCACAGGCTTGCAGCCATACATAGCCCTCTCCATCAGCTaGAGAGTACTCTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: YSKHYIPLLAPTGLQPYIALSIS*RVLSKA
Trigger: AGCCTTTGAGAGTACTCTGCAGCTGATGGAGAGGGC...TATGTATGGCTGCAAGCCTGTGGGGGCCAGGAGTGGAATATAGTGTTTTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp TCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTGAGTCTGCCAGCAGAGACACGATCTaGTTCTTCCCAGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SPHLMSYKKPYTKPSESASRDTI*FFPVVL
Trigger: CAGCACCACTGGGAAGAACCAGATCGTGTCTCTGCT...GGCAGACTCACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp GACTCTGCATCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTCACAGACTCACTGGTTaGCTGCAAGGCAAACTCTCG +
Preference number: 4 (lower is better)
Translates to: DSASPHLMSYKKPYTKPSHRLTG*LQGKLS
Trigger: CGAGAGTTTGCCTTGCAGTCAACCAGTGAGTCTGTG...ACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGATGCAGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp GACTCTGCATCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTCTGAGGTTTCCCTGGTaGCTGAATGTCCCGAAACTC +
Preference number: 4 (lower is better)
Translates to: DSASPHLMSYKKPYTKPSLRFPW*LNVPKL
Trigger: GAGTTTCGGGACATTCAGGCACCAGGGAAACCTCAG...ACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGATGCAGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp AAGATCTCAAAGCACACCTCCACAGTGACAGACTTCCTCCAACAAGGACATCTACCTGAATACCCACAATaGAGCCACTTCCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: KISKHTSTVTDFLQQGHLPEYPQ*SHFHPL
Trigger: CAGAGGATGGAAGTGGCTGCATTGTGGGTATTCAGG...TAGATGTCCTTGTTGGAGGAAGTCTGTCACTGTGGAGGTGTGCTTTGAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp TCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTGAGTCTGCCCAAAAATGCTTCAAGTaGCTTCTCCTGGGCCCCACA +
Preference number: 4 (lower is better)
Translates to: SPHLMSYKKPYTKPSESAQKCFK*LLLGPT
Trigger: TGTGGGGCCCAGGAGAAGGCACTTGAAGCATTTTTG...GGCAGACTCACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp AAGATCTCAAAGCACACCTCCACAGTGACAGACTTCCTCCAACAAGGACATCTATTGATTCACTGGATGTaGGATCAGCAGCCGGTAGGT +
Preference number: 4 (lower is better)
Translates to: KISKHTSTVTDFLQQGHLLIHWM*DQQPVG
Trigger: ACCTACCGGCTGCTGATCCCACATCCAGTGAATCAA...TAGATGTCCTTGTTGGAGGAAGTCTGTCACTGTGGAGGTGTGCTTTGAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp TATTCAAAACACTATATTCCACTCCTGGCCCCCACAGGCTTGCAGCCATACATATGGCAGGTGTGGGAATaGGTTGTCACCAGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: YSKHYIPLLAPTGLQPYIWQVWE*VVTSRK
Trigger: CTTTCTACTGGTGACAACCCATTCCCACACCTGCCA...TATGTATGGCTGCAAGCCTGTGGGGGCCAGGAGTGGAATATAGTGTTTTGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp AAACGAAGTTCTGACATAGTACCTAAGATGTATACCCAAAAGAAAGTGGGGACTGGTTTCCCTGGTGCCTaGATGTCCCGAAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: KRSSDIVPKMYTQKKVGTGFPGA*MSRNSR
Trigger: CCTGGAGTTTCGGGACATTCAGGCACCAGGGAAACC...AGTCCCCACTTTCTTTTGGGTATACATCTTAGGTACTATGTCAGAACTTCGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGAGAAGCAGCAGTTCTTaGTCAGGACTCCAGCTCATG +
Preference number: 4 (lower is better)
Translates to: LAALTAYMNTMHYVNNTERSSSS*SGLQLM
Trigger: CATGAGCTGGAGTCCTGATCAAGAACTGCTGCTTCT...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGTGCCCCATCCAACAGTaGCAAACTTGCCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LAALTAYMNTMHYVNNTECPIQQ*QTCLLQ
Trigger: TTGGAGAAGGCAAGTTTGTCACTGTTGGATGGGGCA...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATAGCAGCATAAACCAATaGCGACTCCATCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: CLPITEVHPTLGNSLAEHSSINQ*RLHPLS
Trigger: TGACAGTGGATGGAGTCGTCATTGGTTTATGCTGCT...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAATTTAAGCATTCTGTaGAATACTCAGGTCCACACT +
Preference number: 4 (lower is better)
Translates to: APTYACCLPITEVHPTLGNLSIL*NTQVHT
Trigger: AGTGTGGACCTGAGTATTTCACAGAATGCTTAAATT...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTTGGAAGAAAACCTTCTaGCACCAAAGAAATTTCAGT +
Preference number: 4 (lower is better)
Translates to: APTYACCLPITEVHPTLGWKKTF*HQRNFS
Trigger: ACTGAAATTTCTTTGGTGGCAGAAGGTTTTCTTCCA...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp GACTCTGCATCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTCCAACACATTCCAGCTaGTGTGTGCTGAGATTGCAG +
Preference number: 4 (lower is better)
Translates to: DSASPHLMSYKKPYTKPSPTHSS*CVLRLQ
Trigger: CTGCAATCTCAGCACACAGCAGCTGGAATGTGTTGG...ACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGATGCAGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp TCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTGAGTCTGCCGCCACAAGCCAAAAATaGTTCAAGTGCCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SPHLMSYKKPYTKPSESAATSQK*FKCLLL
Trigger: CAGGAGAAGGCACTTGAAGCATTTTTGGCTTGTGGC...GGCAGACTCACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp TCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTAGTCCATCCTTCTTTGAGGCTATaGTTCTTGCGCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SWRNISLGLAYSLRGLVHPSLRL*FLRSAF
Trigger: GAAGGCAGAGCGCAAGAAGCATAGCCTCAAAGAAGG...ATGGACTAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGGGGTCTGTTGAGCTGTaGCAAGAAGCAGCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LAALTAYMNTMHYVNNTEGSVEL*QEAAVL
Trigger: AAGAACTGCTGCTTCTTGCCACAGCTCAACAGACCC...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp GACTCTGCATCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTCAGAAATCTGGTTACTaGCGTCGAGGACAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: DSASPHLMSYKKPYTKPSQKSGY*RRGQQG
Trigger: ACCTTGCTGTCCTCGACGCCAGTAACCAGATTTCTG...ACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGATGCAGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGAAAACCTGGCAGGTGTaGGAATGGGTTGTCACCAGT +
Preference number: 4 (lower is better)
Translates to: LAALTAYMNTMHYVNNTEKTWQV*EWVVTS
Trigger: ACTGGTGACAACCCATTCCCACACCTGCCAGGTTTT...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGGCAGAATTTCTCCACTaGCCTCATGACTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: LAALTAYMNTMHYVNNTEAEFLH*PHDCHS
Trigger: TGAGTGGCAGTCATGAGGCCAGTGGAGAAATTCTGC...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATATCCTGGAGTTACTGTaGGAGTATCTGCCACTCATC +
Preference number: 4 (lower is better)
Translates to: CLPITEVHPTLGNSLAEHILELL*EYLPLI
Trigger: GATGAGTGGCAGATACTCCCACAGTAACTCCAGGAT...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp TATTCAAAACACTATATTCCACTCCTGGCCCCCACAGGCTTGCAGCCATACATAACACAGCAAATGACGTaGTATTTGATGCGACCTCAG +
Preference number: 4 (lower is better)
Translates to: YSKHYIPLLAPTGLQPYITQQMT*YLMRPQ
Trigger: CTGAGGTCGCATCAAATATCACGTCATTTGCTGTGT...TATGTATGGCTGCAAGCCTGTGGGGGCCAGGAGTGGAATATAGTGTTTTGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp TCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTAGTCCATTCATGGCGTCACAGATaGGGTCAAGTTTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SWRNISLGLAYSLRGLVHSWRHR*GQVSSH
Trigger: ATGGGAAGAAACTTGACCTCATCTGTGACGCCATGA...ATGGACTAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp AAACGAAGTTCTGACATAGTACCTAAGATGTATACCCAAAAGAAAGTGGGGACTCCACTTCCGAATCTGTaGCAAGACCAAGGCCCGATG +
Preference number: 4 (lower is better)
Translates to: KRSSDIVPKMYTQKKVGTPLPNL*QDQGPM
Trigger: CATCGGGCCTTGGTCTTGGCACAGATTCGGAAGTGG...AGTCCCCACTTTCTTTTGGGTATACATCTTAGGTACTATGTCAGAACTTCGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGTGCAAGCGGTTTTTATaGCGAATGAATGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SILPAHMFVYHMLAWCSVCKRFL*RMNVAV
Trigger: GACAGCCACATTCATTCGCCATAAAAACCGCTTGCA...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp TCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTAGTCCATTCTTCACATGAGATGTaGGTATCGACAGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: SWRNISLGLAYSLRGLVHSSHEM*VSTGRT
Trigger: AGTTCTGCCTGTCGATACTCACATCTCATGTGAAGA...ATGGACTAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGGGTTTTTATGGCGAATaGATGTGGCTGTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LAALTAYMNTMHYVNNTEGFYGE*MWLSQS
Trigger: ACTCTGAGACAGCCACATTCATTCGCCATAAAAACC...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATTTCCATCTGTGTGCATaGATGAACAAATCGAACAGG +
Preference number: 4 (lower is better)
Translates to: CLPITEVHPTLGNSLAEHFHLCA*MNKSNR
Trigger: CCTGTTCGATTTGTTCATCCATGCACACAGATGGAA...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp CTGGCAGCACTAACTGCCTACATGAATACCATGCACTATGTTAACAACACAGAGATAAGCTTTGTGTCCTaGGGAACAACTGTCACGATC +
Preference number: 4 (lower is better)
Translates to: LAALTAYMNTMHYVNNTEISFVS*GTTVTI
Trigger: GATCGTGACAGTTGTTCCCCAGGACACAAAGCTTAT...CTCTGTGTTGTTAACATAGTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATTGGTTGGGTTTATCTTaGGTAGATGCAATCAAACTG +
Preference number: 4 (lower is better)
Translates to: CLPITEVHPTLGNSLAEHWLGLS*VDAIKL
Trigger: CAGTTTGATTGCATCTACTCAAGATAAACCCAACCA...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp GACTCTGCATCTCCGCATCTGATGTCATACAAAAAGCCATACACAAAGCCAAGTTCATTGTTCCCGAACTaGATCGAGTATCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: DSASPHLMSYKKPYTKPSSLFPN*IEYLFS
Trigger: GGAAAAGAGATACTCGATTCAGTTCGGGAACAATGA...ACTTGGCTTTGTGTATGGCTTTTTGTATGACATCAGATGCGGAGATGCAGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp TATGTTAACAACACAGAGCAACTTAGAAACGTGGTTCCACTTGTCTTCACTTTTCTCACAGCAAAATACTaGCCATCCCCACGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: YVNNTEQLRNVVPLVFTFLTAKY*PSPRQV
Trigger: TACCTGGCGTGGGGATGGGCAGTATTTTGCTGTGAG...AAAAGTGAAGACAAGTGGAACCACGTTTCTAAGTTGCTCTGTGTTGTTAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp AAACGAAGTTCTGACATAGTACCTAAGATGTATACCCAAAAGAAAGTGGGGACTCGATCAGTGGTCCAGTaGCAGTCACAGCATAGATAC +
Preference number: 4 (lower is better)
Translates to: KRSSDIVPKMYTQKKVGTRSVVQ*QSQHRY
Trigger: GTATCTATGCTGTGACTGGCACTGGACCACTGATCG...AGTCCCCACTTTCTTTTGGGTATACATCTTAGGTACTATGTCAGAACTTCGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp TCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTAGTCCATCATAGCTTTTCAGAGTaGAACTGTCTTCCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: SWRNISLGLAYSLRGLVHHSFSE*NCLPLG
Trigger: TCCCAAAGGAAGACAGTTCCACTCTGAAAAGCTATG...ATGGACTAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp TGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAACTCTCTAGCAGAACATTTTCGAGAAAGACCTTaGGGTTATGGTCATGAATCA +
Preference number: 4 (lower is better)
Translates to: CLPITEVHPTLGNSLAEHFRERP*GYGHES
Trigger: TGATTCATGACCATAACCCCAAGGTCTTTCTCGAAA...ATGTTCTGCTAGAGAGTTACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGCTACTTCCATCTGTGTaGATGGATGAACAAATCGAA +
Preference number: 4 (lower is better)
Translates to: TKTIPTIMEKHFFGAGLQLLPSV*MDEQIE
Trigger: TTCGATTTGTTCATCCATGCACACAGATGGAAGTAG...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp TATGTTAACAACACAGAGCAACTTAGAAACGTGGTTCCACTTGTCTTCACTTTTCCAAAATCATCCTGGTaGATCTGCTCCTCTGCGATC +
Preference number: 4 (lower is better)
Translates to: YVNNTEQLRNVVPLVFTFPKSSW*ICSSAI
Trigger: GATCGCAGAGGAGCAGATCCACCAGGATGATTTTGG...AAAAGTGAAGACAAGTGGAACCACGTTTCTAAGTTGCTCTGTGTTGTTAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp TATGTTAACAACACAGAGCAACTTAGAAACGTGGTTCCACTTGTCTTCACTTTTCTGGCACAGACTCACTaGTTGACTGCAAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: YVNNTEQLRNVVPLVFTFLAQTH*LTARQT
Trigger: AGTTTGCCTTGCAGTCAACCAGTGAGTCTGTGCCAG...AAAAGTGAAGACAAGTGGAACCACGTTTCTAAGTTGCTCTGTGTTGTTAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp AAACGAAGTTCTGACATAGTACCTAAGATGTATACCCAAAAGAAAGTGGGGACTCATTTGCCAAGTCATTaGCACTATTCCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KRSSDIVPKMYTQKKVGTHLPSH*HYSQSS
Trigger: GGAGCTCTGGGAATAGTGCCAATGACTTGGCAAATG...AGTCCCCACTTTCTTTTGGGTATACATCTTAGGTACTATGTCAGAACTTCGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp TCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTCAGAGGTTTAGTCCATCTCCTAGTTTCACTGTaGAATCCATGTTTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: SWRNISLGLAYSLRGLVHLLVSL*NPCLAY
Trigger: ATAAGCCAAACATGGATTCCACAGTGAAACTAGGAG...ATGGACTAAACCTCTGAGACTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CCA 90 bp ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTTTGGGCTTCTAAAATaGAAGGCTTTACACTGGTTT +
Preference number: 4 (lower is better)
Translates to: TKTIPTIMEKHFFGAGLQFGLLK*KALHWF
Trigger: AAACCAGTGTAAAGCCTTCCATTTTAGAAGCCCAAA...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR GCA 90 bp AAACGAAGTTCTGACATAGTACCTAAGATGTATACCCAAAAGAAAGTGGGGACTAATAACAGCCACATTTaGCAAGTCATTGGCACTATT +
Preference number: 4 (lower is better)
Translates to: KRSSDIVPKMYTQKKVGTNNSHI*QVIGTI
Trigger: AATAGTGCCAATGACTTGGCAAATGTGGCTGTTATT...AGTCCCCACTTTCTTTTGGGTATACATCTTAGGTACTATGTCAGAACTTCGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp TATGTTAACAACACAGAGCAACTTAGAAACGTGGTTCCACTTGTCTTCACTTTTTATCTCTTTTCCAAATaGGGTGTTGTAAGAGGAACT +
Preference number: 4 (lower is better)
Translates to: YVNNTEQLRNVVPLVFTFYLFSK*GVVRGT
Trigger: AGTTCCTCTTACAACACCTCATTTGGAAAAGAGATA...AAAAGTGAAGACAAGTGGAACCACGTTTCTAAGTTGCTCTGTGTTGTTAACATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR TCA 90 bp TATGTTAACAACACAGAGCAACTTAGAAACGTGGTTCCACTTGTCTTCACTTTTTTGGGGTTATGGTCATaGATCAGATTGAGGTTAATT +
Preference number: 4 (lower is better)
Translates to: YVNNTEQLRNVVPLVFTFLGLWS*IRLRLI
Trigger: AATTAACCTCAATCTGATTCATGACCATAACCCCAA...AAAAGTGAAGACAAGTGGAACCACGTTTCTAAGTTGCTCTGTGTTGTTAACATA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 90 bp CTGGTTTCCGAGAAGAGGTCTGACTCTGGGCCATGGGCCACCTCGTaGTCCACATGGACCTGTGGTGCTTGCCTCCTGAGCGCTCGAACC +
Preference number: 5 (lower is better)
Translates to: LVSEKRSDSGPWATS*STWTCGACLLSART
Trigger: GGTTCGAGCGCTCAGGAGGCAAGCACCACAGGTCCATGTGGATCACGAGGTGGCCCATGGCCCAGAGTCAGACCTCTTCTCGGAAACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 90 bp CAAGCCAGGGCGGGCCCCAGTCCTGGCACAGACTCACTGGTTGACTaGAAGGCAAACTCTCGGTTCCATACGCGGATCTTCCGAGCCTCT +
Preference number: 5 (lower is better)
Translates to: QARAGPSPGTDSLVD*KANSRFHTRIFRAS
Trigger: AGAGGCTCGGAAGATCCGCGTATGGAACCGAGAGTTTGCCTTGCAGTCAACCAGTGAGTCTGTGCCAGGACTGGGGCCCGCCCTGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 90 bp TTTCCAAGCCAGGGCGGGCCCCAGTCCTGGCACAGACTCACTGGTTaGCTGCAAGGCAAACTCTCGGTTCCATACGCGGATCTTCCGAGC +
Preference number: 5 (lower is better)
Translates to: FPSQGGPQSWHRLTG*LQGKLSVPYADLPS
Trigger: GCTCGGAAGATCCGCGTATGGAACCGAGAGTTTGCCTTGCAGTCAACCAGTGAGTCTGTGCCAGGACTGGGGCCCGCCCTGGCTTGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp AGGGTTTCCAAGCCAGGGCGGGCCCCAGTCCTGGCACAGACTCACTaGTTGACTGCAAGGCAAACTCTCGGTTCCATACGCGGATCTTCC +
Preference number: 5 (lower is better)
Translates to: RVSKPGRAPVLAQTH*LTARQTLGSIRGSS
Trigger: GGAAGATCCGCGTATGGAACCGAGAGTTTGCCTTGCAGTCAACCAGTGAGTCTGTGCCAGGACTGGGGCCCGCCCTGGCTTGGAAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp CAGTGCCAGTCACAGCATAGATACCGCCAGCCCGTACAGAGAACATaGAGTCGACACGGCGTCACCGGGTCCCACAGCAGAGACACGATC +
Preference number: 5 (lower is better)
Translates to: QCQSQHRYRQPVQRT*SRHGVTGSHSRDTI
Trigger: GATCGTGTCTCTGCTGTGGGACCCGGTGACGCCGTGTCGACTCCATGTTCTCTGTACGGGCTGGCGGTATCTATGCTGTGACTGGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 90 bp GGCATTCTCAGGCAACTGCACCGGAAAGGCTGTTGGCCTGCCTTCTaGGCCGTGGAACTGGGTCTGCTTACTGCCCCATCCAACAGTGAC +
Preference number: 5 (lower is better)
Translates to: GILRQLHRKGCWPAF*AVELGLLTAPSNSD
Trigger: GTCACTGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGTGCAGTTGCCTGAGAATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp TGGAGTCGACACGGCGTCACCGGGTCCCACAGCAGAGACACGATCTaGTTCTTCCCAGTGGTGCTGAAGGGCAGGCTTTGCTTCAGATAC +
Preference number: 5 (lower is better)
Translates to: WSRHGVTGSHSRDTI*FFPVVLKGRLCFRY
Trigger: GTATCTGAAGCAAAGCCTGCCCTTCAGCACCACTGGGAAGAACCAGATCGTGTCTCTGCTGTGGGACCCGGTGACGCCGTGTCGACTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CAA 90 bp TCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGGTTCGACATCCAGCTGGCCTaGCTCCTCATCCACCTCAGA +
Preference number: 5 (lower is better)
Translates to: STPTRPRLIVPLPTGQGFDIQLA*LLIHLR
Trigger: TCTGAGGTGGATGAGGAGCAAGGCCAGCTGGATGTC...GAACCCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 90 bp CCGGGTCCCACAGCAGAGACACGATCTGGTTCTTCCCAGTGGTGCTaGAGGGCAGGCTTTGCTTCAGATACCAGTGATAGTTCCCCACGG +
Preference number: 5 (lower is better)
Translates to: PGPTAETRSGSSQWC*RAGFASDTSDSSPR
Trigger: CCGTGGGGAACTATCACTGGTATCTGAAGCAAAGCCTGCCCTTCAGCACCACTGGGAAGAACCAGATCGTGTCTCTGCTGTGGGACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp CACCGTGCCCTGCTCAGCTCGCAGACAGAAACACTGAGGTTTCCCTaGTGCCTGAATGTCCCGAAACTCCAGGGTCCGATGCAACTTCAG +
Preference number: 5 (lower is better)
Translates to: HRALLSSQTETLRFP*CLNVPKLQGPMQLQ
Trigger: CTGAAGTTGCATCGGACCCTGGAGTTTCGGGACATTCAGGCACCAGGGAAACCTCAGTGTTTCTGTCTGCGAGCTGAGCAGGGCACGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 90 bp CAGGATCTACTTCCGTCAGTCCACGTTCTGAGCCAATCAGCACCGTaGCCTGCTCAGCTCGCAGACAGAAACACTGAGGTTTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: QDLLPSVHVLSQSAP*PAQLADRNTEVSLV
Trigger: CACCAGGGAAACCTCAGTGTTTCTGTCTGCGAGCTGAGCAGGGCACGGTGCTGATTGGCTCAGAACGTGGACTGACGGAAGTAGATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 90 bp CACAGCCTCTTCATAATCCTGGGCGTACTGTTCCAGGACTGTGGCTaGCTCACTGTGCTTCCTCTGCTCCACCAGCTTTCCTGCCAGAGT +
Preference number: 5 (lower is better)
Translates to: HSLFIILGVLFQDCG*LTVLPLLHQLSCQS
Trigger: ACTCTGGCAGGAAAGCTGGTGGAGCAGAGGAAGCACAGTGAGGCAGCCACAGTCCTGGAACAGTACGCCCAGGATTATGAAGAGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp TCAGGCAACTGCACCGGAAAGGCTGTTGGCCTGCCTTCTGAGCCGTaGAACTGGGTCTGCTTACTGCCCCATCCAACAGTGACAAACTTG +
Preference number: 5 (lower is better)
Translates to: SGNCTGKAVGLPSEP*NWVCLLPHPTVTNL
Trigger: CAAGTTTGTCACTGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGTGCAGTTGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp AACACTCACAGCAAAATACTGCCCATCCCCACGCCAGGTAATGTGTaGTCTGCGGTCGTCCCAGGGCAAGGCATTCTCAGGCAACTGCAC +
Preference number: 5 (lower is better)
Translates to: NTHSKILPIPTPGNV*SAVVPGQGILRQLH
Trigger: GTGCAGTTGCCTGAGAATGCCTTGCCCTGGGACGACCGCAGACCACACATTACCTGGCGTGGGGATGGGCAGTATTTTGCTGTGAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp ATTCACTGGATGTGGGATCAGCAGCCGGTAGGTACACATGGGAGGTaGGACGACCGTCTGCCGAAAGACTGTCACCAACACCCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: IHWMWDQQPVGTHGR*DDRLPKDCHQHPVS
Trigger: GGAAACAGGGTGTTGGTGACAGTCTTTCGGCAGACGGTCGTCCCACCTCCCATGTGTACCTACCGGCTGCTGATCCCACATCCAGTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 90 bp CATCTCACTGCCACTCATAATACTGCTGGTTTCCGAGAAGAGGTCTaGCTCTGGGCCATGGGCCACCTCGTGATCCACATGGACCTGTGG +
Preference number: 5 (lower is better)
Translates to: HLTATHNTAGFREEV*LWAMGHLVIHMDLW
Trigger: CCACAGGTCCATGTGGATCACGAGGTGGCCCATGGCCCAGAGTCAGACCTCTTCTCGGAAACCAGCAGTATTATGAGTGGCAGTGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 90 bp CGTGCCCTGCTCAGCTCGCAGACAGAAACACTGAGGTTTCCCTGGTaGCTGAATGTCCCGAAACTCCAGGGTCCGATGCAACTTCAGATT +
Preference number: 5 (lower is better)
Translates to: RALLSSQTETLRFPW*LNVPKLQGPMQLQI
Trigger: AATCTGAAGTTGCATCGGACCCTGGAGTTTCGGGACATTCAGGCACCAGGGAAACCTCAGTGTTTCTGTCTGCGAGCTGAGCAGGGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 90 bp GCCAAGTCATTGGCACTATTCCCAGAGCTCCGATCAGTGGTCCAGTaGCAGTCACAGCATAGATACCGCCAGCCCGTACAGAGAACATGG +
Preference number: 5 (lower is better)
Translates to: AKSLALFPELRSVVQ*QSQHRYRQPVQRTW
Trigger: CCATGTTCTCTGTACGGGCTGGCGGTATCTATGCTGTGACTGGCACTGGACCACTGATCGGAGCTCTGGGAATAGTGCCAATGACTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 90 bp TCCACATGGACCTGTGGTGCTTGCCTCCTGAGCGCTCGAACCACCTaGAAGCGGTTTTTATGGCGAATGAATGTGGCTGTCTCAGAGTCC +
Preference number: 5 (lower is better)
Translates to: STWTCGACLLSARTT*KRFLWRMNVAVSES
Trigger: GGACTCTGAGACAGCCACATTCATTCGCCATAAAAACCGCTTGCAGGTGGTTCGAGCGCTCAGGAGGCAAGCACCACAGGTCCATGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp AACTGCACCGGAAAGGCTGTTGGCCTGCCTTCTGAGCCGTGGAACTaGGTCTGCTTACTGCCCCATCCAACAGTGACAAACTTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: NCTGKAVGLPSEPWN*VCLLPHPTVTNLPS
Trigger: AGAAGGCAAGTTTGTCACTGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGTGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp TTCCAGCAGGCTCAGCTTCCACTGGCTTCTCGGGTCCATCTTCGGTaGCATATAAACCCCAGCATCGAGAGCAGGGACACAAGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: FQQAQLPLASRVHLR*HINPSIESRDTSLL
Trigger: CAGAAGACTTGTGTCCCTGCTCTCGATGCTGGGGTTTATATGCCACCGAAGATGGACCCGAGAAGCCAGTGGAAGCTGAGCCTGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CAA 90 bp GCTGGTCTTGAACTTGCATCAGTCTTTCTGCCCCAGCTTCCTGGGCTGCTGGGATGCTGTGTGCTGAGATaGCAGACTATGACGTCCCCA +
Preference number: 5 (lower is better)
Translates to: AGLELASVFLPQLPGLLGCCVLR*QTMTSP
Trigger: TGGGGACGTCATAGTCTGCAATCTCAGCACACAGCA...TCCCAGCAGCCCAGGAAGCTGGGGCAGAAAGACTGATGCAAGTTCAAGACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 90 bp ACCGGAAAGGCTGTTGGCCTGCCTTCTGAGCCGTGGAACTGGGTCTaGTTACTGCCCCATCCAACAGTGACAAACTTGCCTTCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: TGKAVGLPSEPWNWV*LLPHPTVTNLPSPK
Trigger: TTTTGGAGAAGGCAAGTTTGTCACTGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 90 bp TTCCGAGCCTCTGTTTGTCGACAAACAACACTCACAGCAAAATACTaGCCATCCCCACGCCAGGTAATGTGTGGTCTGCGGTCGTCCCAG +
Preference number: 5 (lower is better)
Translates to: FRASVCRQTTLTAKY*PSPRQVMCGLRSSQ
Trigger: CTGGGACGACCGCAGACCACACATTACCTGGCGTGGGGATGGGCAGTATTTTGCTGTGAGTGTTGTTTGTCGACAAACAGAGGCTCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CAA 90 bp GACATCTACACCAACAAGGCCACGCCTAATAGTGCCACTGCCCACGGGCCAAGGTGGAACTGTCTTCCTTaGGGAGGTCTTCTAGCCATA +
Preference number: 5 (lower is better)
Translates to: DIYTNKATPNSATAHGPRWNCLP*GGLLAI
Trigger: TATGGCTAGAAGACCTCCCAAAGGAAGACAGTTCCA...CCTTGGCCCGTGGGCAGTGGCACTATTAGGCGTGGCCTTGTTGGTGTAGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 90 bp GAGCTGTGGCAAGAAGCAGCAGTTCTTGATCAGGACTCCAGCTCATaGCAGAGATACCACTGGCCACACTCCCAACACATTCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: ELWQEAAVLDQDSSS*QRYHWPHSQHIPAA
Trigger: AGCAGCTGGAATGTGTTGGGAGTGTGGCCAGTGGTATCTCTGTCATGAGCTGGAGTCCTGATCAAGAACTGCTGCTTCTTGCCACAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp GTCATTCCCAAGGTGAGCAGAGAATATGACTTGATTCACTGGATGTaGGATCAGCAGCCGGTAGGTACACATGGGAGGTGGGACGACCGT +
Preference number: 5 (lower is better)
Translates to: VIPKVSREYDLIHWM*DQQPVGTHGRWDDR
Trigger: ACGGTCGTCCCACCTCCCATGTGTACCTACCGGCTGCTGATCCCACATCCAGTGAATCAAGTCATATTCTCTGCTCACCTTGGGAATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 90 bp CGTGAACCCCTTTCCACTTTCCGCAGAATTTCTCCACTGGCCTCATaGCTGCCACTCAGAGCTGCCTGTAGCATTTTAAGTGAGGCACCA +
Preference number: 5 (lower is better)
Translates to: REPLSTFRRISPLAS*LPLRAACSILSEAP
Trigger: TGGTGCCTCACTTAAAATGCTACAGGCAGCTCTGAGTGGCAGTCATGAGGCCAGTGGAGAAATTCTGCGGAAAGTGGAAAGGGGTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp AGCAAGGTCATTCCCAAGGTGAGCAGAGAATATGACTTGATTCACTaGATGTGGGATCAGCAGCCGGTAGGTACACATGGGAGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: SKVIPKVSREYDLIH*MWDQQPVGTHGRWD
Trigger: GTCCCACCTCCCATGTGTACCTACCGGCTGCTGATCCCACATCCAGTGAATCAAGTCATATTCTCTGCTCACCTTGGGAATGACCTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp GGTTCCACAGCCAGAGAAGGTGACTCCCAAAGGTACTTGAGCACCTaGCCATCAGCCAGCTGTACTGCTAATGACTTGGTCTTAGAACAG +
Preference number: 5 (lower is better)
Translates to: GSTAREGDSQRYLST*PSASCTANDLVLEQ
Trigger: CTGTTCTAAGACCAAGTCATTAGCAGTACAGCTGGCTGATGGCCAGGTGCTCAAGTACCTTTGGGAGTCACCTTCTCTGGCTGTGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp ACCTCCAGGTTTCCCCTTGGCATCTGTAGTATAAGCTTTGTGTCCTaGGGAACAACTGTCACGATCCGTGAACCCCTTTCCACTTTCCGC +
Preference number: 5 (lower is better)
Translates to: TSRFPLGICSISFVS*GTTVTIREPLSTFR
Trigger: GCGGAAAGTGGAAAGGGGTTCACGGATCGTGACAGTTGTTCCCCAGGACACAAAGCTTATACTACAGATGCCAAGGGGAAACCTGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CAA 90 bp GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTGCTGAAGGGCAGGCTTaGCTTCAGATACCAGTGATA +
Preference number: 5 (lower is better)
Translates to: APTYACCLPITEVHPTLGAEGQA*LQIPVI
Trigger: TATCACTGGTATCTGAAGCAAAGCCTGCCCTTCAGC...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CAA 90 bp TATTCAAAACACTATATTCCACTCCTGGCCCCCACAGGCTTGCAGCCATACATAATGGACCTGTGGTGCTaGCCTCCTGAGCGCTCGAAC +
Preference number: 5 (lower is better)
Translates to: YSKHYIPLLAPTGLQPYIMDLWC*PPERSN
Trigger: GTTCGAGCGCTCAGGAGGCAAGCACCACAGGTCCAT...TATGTATGGCTGCAAGCCTGTGGGGGCCAGGAGTGGAATATAGTGTTTTGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 90 bp GCCTCCTCTACACTCACACTCTCAGGATCAAAGGGAAGATTTCCTTaGAGTTCCTGTACCTTCTGCAGCACAATTTCCAGCTCCGGGGTG +
Preference number: 5 (lower is better)
Translates to: ASSTLTLSGSKGRFP*SSCTFCSTISSSGV
Trigger: CACCCCGGAGCTGGAAATTGTGCTGCAGAAGGTACAGGAACTTCAAGGAAATCTTCCCTTTGATCCTGAGAGTGTGAGTGTAGAGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CAA 90 bp GCTCCCACATATGCCTGCTGTCTACCCATCACTGAAGTCCACCCTACTCTTGGTAGGTGTGGGAATGGGTaGTCACCAGTAGAAAGTCAT +
Preference number: 5 (lower is better)
Translates to: APTYACCLPITEVHPTLGRCGNG*SPVESH
Trigger: ATGACTTTCTACTGGTGACAACCCATTCCCACACCT...ACCAAGAGTAGGGTGGACTTCAGTGATGGGTAGACAGCAGGCATATGTGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 90 bp ACCTTCTGCAGCACAATTTCCAGCTCCGGGGTGGTTTTCTTCACATaGGATGTGAGTATCGACAGGCAGAACTTTCGAGGATTGATGGCC +
Preference number: 5 (lower is better)
Translates to: TFCSTISSSGVVFFT*DVSIDRQNFRGLMA
Trigger: GGCCATCAATCCTCGAAAGTTCTGCCTGTCGATACTCACATCTCATGTGAAGAAAACCACCCCGGAGCTGGAAATTGTGCTGCAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 90 bp TTTGAGGCTATGCTTCTTGCGCTCTGCCTTCCGACGGTTTTTAGATaGCCTCGCAGATATCCTGGAGTTACTGTGGGAGTATCTGCCACT +
Preference number: 5 (lower is better)
Translates to: FEAMLLALCLPTVFR*PRRYPGVTVGVSAT
Trigger: AGTGGCAGATACTCCCACAGTAACTCCAGGATATCTGCGAGGTCATCTAAAAACCGTCGGAAGGCAGAGCGCAAGAAGCATAGCCTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 90 bp CCACACACACAGATTCCTGATCCAGCAAGTCCTGAATACCCACAATaGAGCCACTTCCATCCTCTGGAAGAAAACCTTCTGCCACCAAAG +
Preference number: 5 (lower is better)
Translates to: PHTQIPDPASPEYPQ*SHFHPLEENLLPPK
Trigger: CTTTGGTGGCAGAAGGTTTTCTTCCAGAGGATGGAAGTGGCTGCATTGTGGGTATTCAGGACTTGCTGGATCAGGAATCTGTGTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp GCTGCCTGTAGCATTTTAAGTGAGGCACCACTTAGGGAGAAAACCTaGCAGGTGTGGGAATGGGTTGTCACCAGTAGAAAGTCATCACAC +
Preference number: 5 (lower is better)
Translates to: AACSILSEAPLREKT*QVWEWVVTSRKSSH
Trigger: GTGTGATGACTTTCTACTGGTGACAACCCATTCCCACACCTGCCAGGTTTTCTCCCTAAGTGGTGCCTCACTTAAAATGCTACAGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp TCACAGATGAGGTCAAGTTTCTTCCCATCAGGATGTGTGGACACCTaGACACTCTTGGTAATCGGGGGAGGGTACATGGTCTTTGTGACA +
Preference number: 5 (lower is better)
Translates to: SQMRSSFFPSGCVDT*TLLVIGGGYMVFVT
Trigger: TGTCACAAAGACCATGTACCCTCCCCCGATTACCAAGAGTGTCCAGGTGTCCACACATCCTGATGGGAAGAAACTTGACCTCATCTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp TTAAGTGAGGCACCACTTAGGGAGAAAACCTGGCAGGTGTGGGAATaGGTTGTCACCAGTAGAAAGTCATCACACACAGCAAATGACGTG +
Preference number: 5 (lower is better)
Translates to: LSEAPLREKTWQVWE*VVTSRKSSHTANDV
Trigger: CACGTCATTTGCTGTGTGTGATGACTTTCTACTGGTGACAACCCATTCCCACACCTGCCAGGTTTTCTCCCTAAGTGGTGCCTCACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 90 bp AAAGACTGTCACCAACACCCTGTTTCCATCAATAACAGCCACATTTaGCAAGTCATTGGCACTATTCCCAGAGCTCCGATCAGTGGTCCA +
Preference number: 5 (lower is better)
Translates to: KDCHQHPVSINNSHI*QVIGTIPRAPISGP
Trigger: TGGACCACTGATCGGAGCTCTGGGAATAGTGCCAATGACTTGGCAAATGTGGCTGTTATTGATGGAAACAGGGTGTTGGTGACAGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp CCATGTTTGGCTTATCACCACACTTGTAGACAGAAATCTGGTTACTaGCGTCGAGGACAGCAAGGTCATTCCCAAGGTGAGCAGAGAATA +
Preference number: 5 (lower is better)
Translates to: PCLAYHHTCRQKSGY*RRGQQGHSQGEQRI
Trigger: TATTCTCTGCTCACCTTGGGAATGACCTTGCTGTCCTCGACGCCAGTAACCAGATTTCTGTCTACAAGTGTGGTGATAAGCCAAACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 90 bp TTCCGACGGTTTTTAGATGACCTCGCAGATATCCTGGAGTTACTGTaGGAGTATCTGCCACTCATCTCACTGCCACTCATAATACTGCTG +
Preference number: 5 (lower is better)
Translates to: FRRFLDDLADILELL*EYLPLISLPLIILL
Trigger: CAGCAGTATTATGAGTGGCAGTGAGATGAGTGGCAGATACTCCCACAGTAACTCCAGGATATCTGCGAGGTCATCTAAAAACCGTCGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CAA 90 bp GGAAGCATGGCAGCCTGCAGGCAGAAACAGTGCTGTACAAGGCAAGAGTTCTATAAAGGGAAGATTTCCTaGAAGTTCCTGTACCTTCTG +
Preference number: 5 (lower is better)
Translates to: GSMAACRQKQCCTRQEFYKGKIS*KFLYLL
Trigger: CAGAAGGTACAGGAACTTCAAGGAAATCTTCCCTTT...ATAGAACTCTTGCCTTGTACAGCACTGTTTCTGCCTGCAGGCTGCCATGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 90 bp AAATGCTTCTTTAAACATAAGTTTGTCCAGCCACTTCCGAATCTGTaGCAAGACCAAGGCCCGATGATGAACAACCTCCAGGTTTCCCCT +
Preference number: 5 (lower is better)
Translates to: KCFFKHKFVQPLPNL*QDQGPMMNNLQVSP
Trigger: AGGGGAAACCTGGAGGTTGTTCATCATCGGGCCTTGGTCTTGGCACAGATTCGGAAGTGGCTGGACAAACTTATGTTTAAAGAAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 90 bp ATAGCCAGGAAAGTGTCGTCTTCAACCCAGGTGAGAAAGCTCAACTaGAGTGCGTTTACTTCTTCTTCTTCTTCTTCTTCATTGTTCCCG +
Preference number: 5 (lower is better)
Translates to: IARKVSSSTQVRKLN*SAFTSSSSSSSLFP
Trigger: CGGGAACAATGAAGAAGAAGAAGAAGAAGAAGTAAACGCACTGCAGTTGAGCTTTCTCACCTGGGTTGAAGACGACACTTTCCTGGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CAA 90 bp ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGAAGAAGCAGCAGTTCTaGATCAGGACTCCAGCTCAT +
Preference number: 5 (lower is better)
Translates to: TKTIPTIMEKHFFGAGLQKKQQF*IRTPAH
Trigger: ATGAGCTGGAGTCCTGATCAAGAACTGCTGCTTCTT...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 90 bp AATACCCACAATGCAGCCACTTCCATCCTCTGGAAGAAAACCTTCTaGCACCAAAGAAATTTCAGTCTTCACTTCTCTTCTCACAGGATC +
Preference number: 5 (lower is better)
Translates to: NTHNAATSILWKKTF*HQRNFSLHFSSHRI
Trigger: GATCCTGTGAGAAGAGAAGTGAAGACTGAAATTTCTTTGGTGGCAGAAGGTTTTCTTCCAGAGGATGGAAGTGGCTGCATTGTGGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 90 bp GACAAACTTGCCTTCTCCAAAATCATCCTGGTGGATCTGCTCCTCTaGGATCACTTCAAAGTCTTTTGTCATCATAATCAGGGTCTGTTG +
Preference number: 5 (lower is better)
Translates to: DKLAFSKIILVDLLL*DHFKVFCHHNQGLL
Trigger: CAACAGACCCTGATTATGATGACAAAAGACTTTGAAGTGATCGCAGAGGAGCAGATCCACCAGGATGATTTTGGAGAAGGCAAGTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 90 bp CCAACAGTGACAAACTTGCCTTCTCCAAAATCATCCTGGTGGATCTaGTCCTCTGCGATCACTTCAAAGTCTTTTGTCATCATAATCAGG +
Preference number: 5 (lower is better)
Translates to: PTVTNLPSPKSSWWI*SSAITSKSFVIIIR
Trigger: CCTGATTATGATGACAAAAGACTTTGAAGTGATCGCAGAGGAGCAGATCCACCAGGATGATTTTGGAGAAGGCAAGTTTGTCACTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CAA 90 bp AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGAGCAGAGAATATGACTaGATTCACTGGATGTGGGAT +
Preference number: 5 (lower is better)
Translates to: SILPAHMFVYHMLAWCSVSREYD*IHWMWD
Trigger: ATCCCACATCCAGTGAATCAAGTCATATTCTCTGCT...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CAA 90 bp AAACGAAGTTCTGACATAGTACCTAAGATGTATACCCAAAAGAAAGTGGGGACTAGAGGACTCCCTTCTTaGAGGCTATGCTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: KRSSDIVPKMYTQKKVGTRGLPS*RLCFLR
Trigger: GCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTCT...AGTCCCCACTTTCTTTTGGGTATACATCTTAGGTACTATGTCAGAACTTCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CAA 90 bp AGTATTTTGCCTGCACATATGTTTGTGTACCACATGCTTGCCTGGTGCTCAGTGCTGGTTGGGTTTATCTaGAGTAGATGCAATCAAACT +
Preference number: 5 (lower is better)
Translates to: SILPAHMFVYHMLAWCSVLVGFI*SRCNQT
Trigger: AGTTTGATTGCATCTACTCAAGATAAACCCAACCAG...CACTGAGCACCAGGCAAGCATGTGGTACACAAACATATGTGCAGGCAAAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CAA 90 bp ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTATCGTTTCAAGTACTaGTCTATGGTGAACCTCTGG +
Preference number: 5 (lower is better)
Translates to: TKTIPTIMEKHFFGAGLQYRFKY*SMVNLW
Trigger: CCAGAGGTTCACCATAGACAAGTACTTGAAACGATA...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS-3UTR CAA 90 bp ACCAAGACCATACCAACTATCATGGAGAAACATTTCTTTGGGGCTGGCTTACAGTCTGGACGATATAACTaGAGAGCTTCTTTATACAAG +
Preference number: 5 (lower is better)
Translates to: TKTIPTIMEKHFFGAGLQSGRYN*RASLYK
Trigger: CTTGTATAAAGAAGCTCTCAAGTTATATCGTCCAGA...CTGTAAGCCAGCCCCAAAGAAATGTTTCTCCATGATAGTTGGTATGGTCTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 72 bp CTGCGGTCGTCCCAGGGCAAGGCATTCTCAGGCAACTaGACCGGAAAGGCTGTTGGCCTGCCTTCTGAGCCG +
Preference number: 6 (lower is better)
Translates to: LRSSQGKAFSGN*TGKAVGLPSEP
Trigger: CGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGTGCAGTTGCCTGAGAATGCCTTGCCCTGGGACGACCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 90 bp CGTCCCAGGGCAAGGCATTCTCAGGCAACTGCACCGGAAAGGCTGTaGGCCTGCCTTCTGAGCCGTGGAACTGGGTCTGCTTACTGCCCC +
Preference number: 6 (lower is better)
Translates to: RPRARHSQATAPERL*ACLLSRGTGSAYCP
Trigger: GGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGTGCAGTTGCCTGAGAATGCCTTGCCCTGGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp CACGGCGTCACCGGGTCCCACAGCAGAGACACGATCTaGTTCTTCCCAGTGGTGCTGAAGGGCAGGCTTTGC +
Preference number: 6 (lower is better)
Translates to: HGVTGSHSRDTI*FFPVVLKGRLC
Trigger: GCAAAGCCTGCCCTTCAGCACCACTGGGAAGAACCAGATCGTGTCTCTGCTGTGGGACCCGGTGACGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 90 bp CTCTGGGCCATGGGCCACCTCGTGATCCACATGGACCTGTGGTGCTaGCCTCCTGAGCGCTCGAACCACCTGCAAGCGGTTTTTATGGCG +
Preference number: 6 (lower is better)
Translates to: LWAMGHLVIHMDLWC*PPERSNHLQAVFMA
Trigger: CGCCATAAAAACCGCTTGCAGGTGGTTCGAGCGCTCAGGAGGCAAGCACCACAGGTCCATGTGGATCACGAGGTGGCCCATGGCCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 72 bp GAGAAGAGGTCTGACTCTGGGCCATGGGCCACCTCGTaGTCCACATGGACCTGTGGTGCTTGCCTCCTGAGC +
Preference number: 6 (lower is better)
Translates to: EKRSDSGPWATS*STWTCGACLLS
Trigger: GCTCAGGAGGCAAGCACCACAGGTCCATGTGGATCACGAGGTGGCCCATGGCCCAGAGTCAGACCTCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp AAGCCAGGGCGGGCCCCAGTCCTGGCACAGACTCACTaGTTGACTGCAAGGCAAACTCTCGGTTCCATACGC +
Preference number: 6 (lower is better)
Translates to: KPGRAPVLAQTH*LTARQTLGSIR
Trigger: GCGTATGGAACCGAGAGTTTGCCTTGCAGTCAACCAGTGAGTCTGTGCCAGGACTGGGGCCCGCCCTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 72 bp ATGGGCCACCTCGTGATCCACATGGACCTGTGGTGCTaGCCTCCTGAGCGCTCGAACCACCTGCAAGCGGTT +
Preference number: 6 (lower is better)
Translates to: MGHLVIHMDLWC*PPERSNHLQAV
Trigger: AACCGCTTGCAGGTGGTTCGAGCGCTCAGGAGGCAAGCACCACAGGTCCATGTGGATCACGAGGTGGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 90 bp GTTTCCAAGCCAGGGCGGGCCCCAGTCCTGGCACAGACTCACTGGTaGACTGCAAGGCAAACTCTCGGTTCCATACGCGGATCTTCCGAG +
Preference number: 6 (lower is better)
Translates to: VSKPGRAPVLAQTHW*TARQTLGSIRGSSE
Trigger: CTCGGAAGATCCGCGTATGGAACCGAGAGTTTGCCTTGCAGTCAACCAGTGAGTCTGTGCCAGGACTGGGGCCCGCCCTGGCTTGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 72 bp CCAGAAGAGCCAGGCCCTCCAGAGGACTCCCTTCTTTaGGGCTATGCTTCTTGCGCTCTGCCTTCCGACGGT +
Preference number: 6 (lower is better)
Translates to: PEEPGPPEDSLL*GYASCALPSDG
Trigger: ACCGTCGGAAGGCAGAGCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTCTGGAGGGCCTGGCTCTTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp TGCACCGGAAAGGCTGTTGGCCTGCCTTCTGAGCCGTaGAACTGGGTCTGCTTACTGCCCCATCCAACAGTG +
Preference number: 6 (lower is better)
Translates to: CTGKAVGLPSEP*NWVCLLPHPTV
Trigger: CACTGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp TCACAGCATAGATACCGCCAGCCCGTACAGAGAACATaGAGTCGACACGGCGTCACCGGGTCCCACAGCAGA +
Preference number: 6 (lower is better)
Translates to: SQHRYRQPVQRT*SRHGVTGSHSR
Trigger: TCTGCTGTGGGACCCGGTGACGCCGTGTCGACTCCATGTTCTCTGTACGGGCTGGCGGTATCTATGCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 72 bp GCAAGGCATTCTCAGGCAACTGCACCGGAAAGGCTGTaGGCCTGCCTTCTGAGCCGTGGAACTGGGTCTGCT +
Preference number: 6 (lower is better)
Translates to: ARHSQATAPERL*ACLLSRGTGSA
Trigger: AGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCCGGTGCAGTTGCCTGAGAATGCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 72 bp TCCAGAAGAGCCAGGCCCTCCAGAGGACTCCCTTCTTaGAGGCTATGCTTCTTGCGCTCTGCCTTCCGACGG +
Preference number: 6 (lower is better)
Translates to: SRRARPSRGLPS*RLCFLRSAFRR
Trigger: CCGTCGGAAGGCAGAGCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTCTGGAGGGCCTGGCTCTTCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp AGCAAAATACTGCCCATCCCCACGCCAGGTAATGTGTaGTCTGCGGTCGTCCCAGGGCAAGGCATTCTCAGG +
Preference number: 6 (lower is better)
Translates to: SKILPIPTPGNV*SAVVPGQGILR
Trigger: CCTGAGAATGCCTTGCCCTGGGACGACCGCAGACCACACATTACCTGGCGTGGGGATGGGCAGTATTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp ATGTGGGATCAGCAGCCGGTAGGTACACATGGGAGGTaGGACGACCGTCTGCCGAAAGACTGTCACCAACAC +
Preference number: 6 (lower is better)
Translates to: MWDQQPVGTHGR*DDRLPKDCHQH
Trigger: GTGTTGGTGACAGTCTTTCGGCAGACGGTCGTCCCACCTCCCATGTGTACCTACCGGCTGCTGATCCCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp TCACTGGATGTGGGATCAGCAGCCGGTAGGTACACATaGGAGGTGGGACGACCGTCTGCCGAAAGACTGTCA +
Preference number: 6 (lower is better)
Translates to: SLDVGSAAGRYT*EVGRPSAERLS
Trigger: TGACAGTCTTTCGGCAGACGGTCGTCCCACCTCCCATGTGTACCTACCGGCTGCTGATCCCACATCCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 90 bp CTCAGCGCCTCCAGAAGAGCCAGGCCCTCCAGAGGACTCCCTTCTTaGAGGCTATGCTTCTTGCGCTCTGCCTTCCGACGGTTTTTAGAT +
Preference number: 6 (lower is better)
Translates to: LSASRRARPSRGLPS*RLCFLRSAFRRFLD
Trigger: ATCTAAAAACCGTCGGAAGGCAGAGCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTCTGGAGGGCCTGGCTCTTCTGGAGGCGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 72 bp GGTGCTCCTGCATCAGGTGCTCGCCATAAGCCATGCTaGCCGCCTGGTACTGTGGTGAGTCTGGACGATATA +
Preference number: 6 (lower is better)
Translates to: GAPASGARHKPC*PPGTVVSLDDI
Trigger: TATATCGTCCAGACTCACCACAGTACCAGGCGGTCAGCATGGCTTATGGCGAGCACCTGATGCAGGAGCACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 72 bp GCTGTTGGCCTGCCTTCTGAGCCGTGGAACTGGGTCTaGTTACTGCCCCATCCAACAGTGACAAACTTGCCT +
Preference number: 6 (lower is better)
Translates to: AVGLPSEPWNWV*LLPHPTVTNLP
Trigger: AGGCAAGTTTGTCACTGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 72 bp ACTCTGTTGGCCGGCAGGAGTCCAGATCTCTGGAACTaGCCTCTCCATCAGCTGCAGAGTACTCTCAAAGGC +
Preference number: 6 (lower is better)
Translates to: TLLAGRSPDLWN*PLHQLQSTLKG
Trigger: GCCTTTGAGAGTACTCTGCAGCTGATGGAGAGGGCAGTTCCAGAGATCTGGACTCCTGCCGGCCAACAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp GGAAAGGCTGTTGGCCTGCCTTCTGAGCCGTGGAACTaGGTCTGCTTACTGCCCCATCCAACAGTGACAAAC +
Preference number: 6 (lower is better)
Translates to: GKAVGLPSEPWN*VCLLPHPTVTN
Trigger: GTTTGTCACTGTTGGATGGGGCAGTAAGCAGACCCAGTTCCACGGCTCAGAAGGCAGGCCAACAGCCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp GCTCAGCTTCCACTGGCTTCTCGGGTCCATCTTCGGTaGCATATAAACCCCAGCATCGAGAGCAGGGACACA +
Preference number: 6 (lower is better)
Translates to: AQLPLASRVHLR*HINPSIESRDT
Trigger: TGTGTCCCTGCTCTCGATGCTGGGGTTTATATGCCACCGAAGATGGACCCGAGAAGCCAGTGGAAGCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 72 bp ACACTCCCAACACATTCCAGCTGCTGTGTGCTGAGATaGCAGACTATGACGTCCCCAGAGGCGGTGGCCACA +
Preference number: 6 (lower is better)
Translates to: TLPTHSSCCVLR*QTMTSPEAVAT
Trigger: TGTGGCCACCGCCTCTGGGGACGTCATAGTCTGCAATCTCAGCACACAGCAGCTGGAATGTGTTGGGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 90 bp CAGAGACACGATCTGGTTCTTCCCAGTGGTGCTGAAGGGCAGGCTTaGCTTCAGATACCAGTGATAGTTCCCCACGGTCCAGAGCTGGAC +
Preference number: 6 (lower is better)
Translates to: QRHDLVLPSGAEGQA*LQIPVIVPHGPELD
Trigger: GTCCAGCTCTGGACCGTGGGGAACTATCACTGGTATCTGAAGCAAAGCCTGCCCTTCAGCACCACTGGGAAGAACCAGATCGTGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 72 bp GCCACTCATAATACTGCTGGTTTCCGAGAAGAGGTCTaGCTCTGGGCCATGGGCCACCTCGTGATCCACATG +
Preference number: 6 (lower is better)
Translates to: ATHNTAGFREEV*LWAMGHLVIHM
Trigger: CATGTGGATCACGAGGTGGCCCATGGCCCAGAGTCAGACCTCTTCTCGGAAACCAGCAGTATTATGAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 72 bp ACCTGTGGTGCTTGCCTCCTGAGCGCTCGAACCACCTaGAAGCGGTTTTTATGGCGAATGAATGTGGCTGTC +
Preference number: 6 (lower is better)
Translates to: TCGACLLSARTT*KRFLWRMNVAV
Trigger: GACAGCCACATTCATTCGCCATAAAAACCGCTTGCAGGTGGTTCGAGCGCTCAGGAGGCAAGCACCACAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 72 bp GCCAGGCCCTCCAGAGGACTCCCTTCTTTGAGGCTATaGTTCTTGCGCTCTGCCTTCCGACGGTTTTTAGAT +
Preference number: 6 (lower is better)
Translates to: ARPSRGLPSLRL*FLRSAFRRFLD
Trigger: ATCTAAAAACCGTCGGAAGGCAGAGCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTCTGGAGGGCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp CCAAGTCATTGGCACTATTCCCAGAGCTCCGATCAGTaGTCCAGTGCCAGTCACAGCATAGATACCGCCAGC +
Preference number: 6 (lower is better)
Translates to: PSHWHYSQSSDQ*SSASHSIDTAS
Trigger: GCTGGCGGTATCTATGCTGTGACTGGCACTGGACCACTGATCGGAGCTCTGGGAATAGTGCCAATGACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 90 bp AGAGCCAGGCCCTCCAGAGGACTCCCTTCTTTGAGGCTATGCTTCTaGCGCTCTGCCTTCCGACGGTTTTTAGATGACCTCGCAGATATC +
Preference number: 6 (lower is better)
Translates to: RARPSRGLPSLRLCF*RSAFRRFLDDLADI
Trigger: GATATCTGCGAGGTCATCTAAAAACCGTCGGAAGGCAGAGCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTCTGGAGGGCCTGGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 72 bp GTTCCACAGCCAGAGAAGGTGACTCCCAAAGGTACTTaGGCACCTGGCCATCAGCCAGCTGTACTGCTAATG +
Preference number: 6 (lower is better)
Translates to: VPQPEKVTPKGT*APGHQPAVLLM
Trigger: CATTAGCAGTACAGCTGGCTGATGGCCAGGTGCTCAAGTACCTTTGGGAGTCACCTTCTCTGGCTGTGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp ACTCCATCCACTGTCACAGACGAACTGACATCCAGCTaGCCTTGCTCCTCATCCACCTCAGAATGGGTCACA +
Preference number: 6 (lower is better)
Translates to: TPSTVTDELTSS*PCSSSTSEWVT
Trigger: TGTGACCCATTCTGAGGTGGATGAGGAGCAAGGCCAGCTGGATGTCAGTTCGTCTGTGACAGTGGATGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp GCCAGAGAAGGTGACTCCCAAAGGTACTTGAGCACCTaGCCATCAGCCAGCTGTACTGCTAATGACTTGGTC +
Preference number: 6 (lower is better)
Translates to: AREGDSQRYLST*PSASCTANDLV
Trigger: GACCAAGTCATTAGCAGTACAGCTGGCTGATGGCCAGGTGCTCAAGTACCTTTGGGAGTCACCTTCTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp GTGAACCCCTTTCCACTTTCCGCAGAATTTCTCCACTaGCCTCATGACTGCCACTCAGAGCTGCCTGTAGCA +
Preference number: 6 (lower is better)
Translates to: VNPFPLSAEFLH*PHDCHSELPVA
Trigger: TGCTACAGGCAGCTCTGAGTGGCAGTCATGAGGCCAGTGGAGAAATTCTGCGGAAAGTGGAAAGGGGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 72 bp GGTTCCACAGCCAGAGAAGGTGACTCCCAAAGGTACTaGAGCACCTGGCCATCAGCCAGCTGTACTGCTAAT +
Preference number: 6 (lower is better)
Translates to: GSTAREGDSQRY*STWPSASCTAN
Trigger: ATTAGCAGTACAGCTGGCTGATGGCCAGGTGCTCAAGTACCTTTGGGAGTCACCTTCTCTGGCTGTGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 72 bp CCCTCCAGAGGACTCCCTTCTTTGAGGCTATGCTTCTaGCGCTCTGCCTTCCGACGGTTTTTAGATGACCTC +
Preference number: 6 (lower is better)
Translates to: PSRGLPSLRLCF*RSAFRRFLDDL
Trigger: GAGGTCATCTAAAAACCGTCGGAAGGCAGAGCGCAAGAAGCATAGCCTCAAAGAAGGGAGTCCTCTGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 72 bp TCCACTGTCACAGACGAACTGACATCCAGCTGGCCTTaGTCCTCATCCACCTCAGAATGGGTCACAGTCAAA +
Preference number: 6 (lower is better)
Translates to: STVTDELTSSWP*SSSTSEWVTVK
Trigger: TTTGACTGTGACCCATTCTGAGGTGGATGAGGAGCAAGGCCAGCTGGATGTCAGTTCGTCTGTGACAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp AGGTCAAGTTTCTTCCCATCAGGATGTGTGGACACCTaGACACTCTTGGTAATCGGGGGAGGGTACATGGTC +
Preference number: 6 (lower is better)
Translates to: RSSFFPSGCVDT*TLLVIGGGYMV
Trigger: GACCATGTACCCTCCCCCGATTACCAAGAGTGTCCAGGTGTCCACACATCCTGATGGGAAGAAACTTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp CTCCTGAGCGCTCGAACCACCTGCAAGCGGTTTTTATaGCGAATGAATGTGGCTGTCTCAGAGTCCAGAAAG +
Preference number: 6 (lower is better)
Translates to: LLSARTTCKRFL*RMNVAVSESRK
Trigger: CTTTCTGGACTCTGAGACAGCCACATTCATTCGCCATAAAAACCGCTTGCAGGTGGTTCGAGCGCTCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 72 bp ATCCACTGTCACAGACGAACTGACATCCAGCTGGCCTaGCTCCTCATCCACCTCAGAATGGGTCACAGTCAA +
Preference number: 6 (lower is better)
Translates to: IHCHRRTDIQLA*LLIHLRMGHSQ
Trigger: TTGACTGTGACCCATTCTGAGGTGGATGAGGAGCAAGGCCAGCTGGATGTCAGTTCGTCTGTGACAGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 90 bp GTCGAGGACAGCAAGGTCATTCCCAAGGTGAGCAGAGAATATGACTaGATTCACTGGATGTGGGATCAGCAGCCGGTAGGTACACATGGG +
Preference number: 6 (lower is better)
Translates to: VEDSKVIPKVSREYD*IHWMWDQQPVGTHG
Trigger: CCCATGTGTACCTACCGGCTGCTGATCCCACATCCAGTGAATCAAGTCATATTCTCTGCTCACCTTGGGAATGACCTTGCTGTCCTCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 72 bp GCGCTCGAACCACCTGCAAGCGGTTTTTATGGCGAATaGATGTGGCTGTCTCAGAGTCCAGAAAGTCCATGT +
Preference number: 6 (lower is better)
Translates to: ALEPPASGFYGE*MWLSQSPESPC
Trigger: ACATGGACTTTCTGGACTCTGAGACAGCCACATTCATTCGCCATAAAAACCGCTTGCAGGTGGTTCGAGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 72 bp TCTGTTTGTCGACAAACAACACTCACAGCAAAATACTaGCCATCCCCACGCCAGGTAATGTGTGGTCTGCGG +
Preference number: 6 (lower is better)
Translates to: SVCRQTTLTAKY*PSPRQVMCGLR
Trigger: CCGCAGACCACACATTACCTGGCGTGGGGATGGGCAGTATTTTGCTGTGAGTGTTGTTTGTCGACAAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 72 bp GGAGTCCAGATCTCTGGAACTGCCCTCTCCATCAGCTaGAGAGTACTCTCAAAGGCTCTCTGTAACTCCTTT +
Preference number: 6 (lower is better)
Translates to: GVQISGTALSIS*RVLSKALCNSF
Trigger: AAAGGAGTTACAGAGAGCCTTTGAGAGTACTCTGCAGCTGATGGAGAGGGCAGTTCCAGAGATCTGGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp TCCCCACGGTCCAGAGCTGGACATAGCTTTTCAGAGTaGAACTGTCTTCCTTTGGGAGGTCTTCTAGCCATA +
Preference number: 6 (lower is better)
Translates to: SPRSRAGHSFSE*NCLPLGGLLAI
Trigger: TATGGCTAGAAGACCTCCCAAAGGAAGACAGTTCCACTCTGAAAAGCTATGTCCAGCTCTGGACCGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp AAGGTGAGCAGAGAATATGACTTGATTCACTGGATGTaGGATCAGCAGCCGGTAGGTACACATGGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: KVSREYDLIHWM*DQQPVGTHGRW
Trigger: CCACCTCCCATGTGTACCTACCGGCTGCTGATCCCACATCCAGTGAATCAAGTCATATTCTCTGCTCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 72 bp TTCTTCCCATCAGGATGTGTGGACACCTGGACACTCTaGGTAATCGGGGGAGGGTACATGGTCTTTGTGACA +
Preference number: 6 (lower is better)
Translates to: FFPSGCVDTWTL*VIGGGYMVFVT
Trigger: TGTCACAAAGACCATGTACCCTCCCCCGATTACCAAGAGTGTCCAGGTGTCCACACATCCTGATGGGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 90 bp ACCAACACCCTGTTTCCATCAATAACAGCCACATTTGCCAAGTCATaGGCACTATTCCCAGAGCTCCGATCAGTGGTCCAGTGCCAGTCA +
Preference number: 6 (lower is better)
Translates to: TNTLFPSITATFAKS*ALFPELRSVVQCQS
Trigger: TGACTGGCACTGGACCACTGATCGGAGCTCTGGGAATAGTGCCAATGACTTGGCAAATGTGGCTGTTATTGATGGAAACAGGGTGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 90 bp AGGTCAAGTTTCTTCCCATCAGGATGTGTGGACACCTGGACACTCTaGGTAATCGGGGGAGGGTACATGGTCTTTGTGACATCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: RSSFFPSGCVDTWTL*VIGGGYMVFVTSSS
Trigger: GGAAGAAGATGTCACAAAGACCATGTACCCTCCCCCGATTACCAAGAGTGTCCAGGTGTCCACACATCCTGATGGGAAGAAACTTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 72 bp CAAGAAGCAGCAGTTCTTGATCAGGACTCCAGCTCATaGCAGAGATACCACTGGCCACACTCCCAACACATT +
Preference number: 6 (lower is better)
Translates to: QEAAVLDQDSSS*QRYHWPHSQHI
Trigger: AATGTGTTGGGAGTGTGGCCAGTGGTATCTCTGTCATGAGCTGGAGTCCTGATCAAGAACTGCTGCTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 72 bp AAGCTTTGTGTCCTGGGGAACAACTGTCACGATCCGTaGACCCCTTTCCACTTTCCGCAGAATTTCTCCACT +
Preference number: 6 (lower is better)
Translates to: KLCVLGNNCHDP*TPFHFPQNFST
Trigger: AGTGGAGAAATTCTGCGGAAAGTGGAAAGGGGTTCACGGATCGTGACAGTTGTTCCCCAGGACACAAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 72 bp ATGCTTCTTGCGCTCTGCCTTCCGACGGTTTTTAGATaGCCTCGCAGATATCCTGGAGTTACTGTGGGAGTA +
Preference number: 6 (lower is better)
Translates to: MLLALCLPTVFR*PRRYPGVTVGV
Trigger: TACTCCCACAGTAACTCCAGGATATCTGCGAGGTCATCTAAAAACCGTCGGAAGGCAGAGCGCAAGAAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp ATTCCCAAGGTGAGCAGAGAATATGACTTGATTCACTaGATGTGGGATCAGCAGCCGGTAGGTACACATGGG +
Preference number: 6 (lower is better)
Translates to: IPKVSREYDLIH*MWDQQPVGTHG
Trigger: CCCATGTGTACCTACCGGCTGCTGATCCCACATCCAGTGAATCAAGTCATATTCTCTGCTCACCTTGGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp GCTTATCACCACACTTGTAGACAGAAATCTGGTTACTaGCGTCGAGGACAGCAAGGTCATTCCCAAGGTGAG +
Preference number: 6 (lower is better)
Translates to: AYHHTCRQKSGY*RRGQQGHSQGE
Trigger: CTCACCTTGGGAATGACCTTGCTGTCCTCGACGCCAGTAACCAGATTTCTGTCTACAAGTGTGGTGATAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp TTTCCCCTTGGCATCTGTAGTATAAGCTTTGTGTCCTaGGGAACAACTGTCACGATCCGTGAACCCCTTTCC +
Preference number: 6 (lower is better)
Translates to: FPLGICSISFVS*GTTVTIREPLS
Trigger: GGAAAGGGGTTCACGGATCGTGACAGTTGTTCCCCAGGACACAAAGCTTATACTACAGATGCCAAGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 72 bp AGCAAGGTCATTCCCAAGGTGAGCAGAGAATATGACTaGATTCACTGGATGTGGGATCAGCAGCCGGTAGGT +
Preference number: 6 (lower is better)
Translates to: SKVIPKVSREYD*IHWMWDQQPVG
Trigger: ACCTACCGGCTGCTGATCCCACATCCAGTGAATCAAGTCATATTCTCTGCTCACCTTGGGAATGACCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 90 bp AGGTACTTGAGCACCTGGCCATCAGCCAGCTGTACTGCTAATGACTaGGTCTTAGAACAGCAGCATAAACCAATGACGACTCCATCCACT +
Preference number: 6 (lower is better)
Translates to: RYLSTWPSASCTAND*VLEQQHKPMTTPST
Trigger: AGTGGATGGAGTCGTCATTGGTTTATGCTGCTGTTCTAAGACCAAGTCATTAGCAGTACAGCTGGCTGATGGCCAGGTGCTCAAGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 72 bp CTTTCCACTTTCCGCAGAATTTCTCCACTGGCCTCATaGCTGCCACTCAGAGCTGCCTGTAGCATTTTAAGT +
Preference number: 6 (lower is better)
Translates to: LSTFRRISPLAS*LPLRAACSILS
Trigger: ACTTAAAATGCTACAGGCAGCTCTGAGTGGCAGTCATGAGGCCAGTGGAGAAATTCTGCGGAAAGTGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 72 bp AGCACAATTTCCAGCTCCGGGGTGGTTTTCTTCACATaGGATGTGAGTATCGACAGGCAGAACTTTCGAGGA +
Preference number: 6 (lower is better)
Translates to: STISSSGVVFFT*DVSIDRQNFRG
Trigger: TCCTCGAAAGTTCTGCCTGTCGATACTCACATCTCATGTGAAGAAAACCACCCCGGAGCTGGAAATTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 72 bp CACCAACACCCTGTTTCCATCAATAACAGCCACATTTaGCAAGTCATTGGCACTATTCCCAGAGCTCCGATC +
Preference number: 6 (lower is better)
Translates to: HQHPVSINNSHI*QVIGTIPRAPI
Trigger: GATCGGAGCTCTGGGAATAGTGCCAATGACTTGGCAAATGTGGCTGTTATTGATGGAAACAGGGTGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp CAGTCAGACCAAGGACACATTCCTCTCCTCCAATCGTaGCTACTTCCATCTGTGTGCATGGATGAACAAATC +
Preference number: 6 (lower is better)
Translates to: QSDQGHIPLLQS*LLPSVCMDEQI
Trigger: GATTTGTTCATCCATGCACACAGATGGAAGTAGCCACGATTGGAGGAGAGGAATGTGTCCTTGGTCTGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp AGCATTTTAAGTGAGGCACCACTTAGGGAGAAAACCTaGCAGGTGTGGGAATGGGTTGTCACCAGTAGAAAG +
Preference number: 6 (lower is better)
Translates to: SILSEAPLREKT*QVWEWVVTSRK
Trigger: CTTTCTACTGGTGACAACCCATTCCCACACCTGCCAGGTTTTCTCCCTAAGTGGTGCCTCACTTAAAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 72 bp CACTTAGGGAGAAAACCTGGCAGGTGTGGGAATGGGTaGTCACCAGTAGAAAGTCATCACACACAGCAAATG +
Preference number: 6 (lower is better)
Translates to: HLGRKPGRCGNG*SPVESHHTQQM
Trigger: CATTTGCTGTGTGTGATGACTTTCTACTGGTGACAACCCATTCCCACACCTGCCAGGTTTTCTCCCTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 72 bp TTTAAACATAAGTTTGTCCAGCCACTTCCGAATCTGTaGCAAGACCAAGGCCCGATGATGAACAACCTCCAG +
Preference number: 6 (lower is better)
Translates to: FKHKFVQPLPNL*QDQGPMMNNLQ
Trigger: CTGGAGGTTGTTCATCATCGGGCCTTGGTCTTGGCACAGATTCGGAAGTGGCTGGACAAACTTATGTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 72 bp ACACTCACACTCTCAGGATCAAAGGGAAGATTTCCTTaGAGTTCCTGTACCTTCTGCAGCACAATTTCCAGC +
Preference number: 6 (lower is better)
Translates to: TLTLSGSKGRFP*SSCTFCSTISS
Trigger: GCTGGAAATTGTGCTGCAGAAGGTACAGGAACTTCAAGGAAATCTTCCCTTTGATCCTGAGAGTGTGAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 72 bp ATTCCTCTCCTCCAATCGTGGCTACTTCCATCTGTGTaGATGGATGAACAAATCGAACAGGAATTCCTTCAG +
Preference number: 6 (lower is better)
Translates to: IPLLQSWLLPSV*MDEQIEQEFLQ
Trigger: CTGAAGGAATTCCTGTTCGATTTGTTCATCCATGCACACAGATGGAAGTAGCCACGATTGGAGGAGAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp TTTTTAGATGACCTCGCAGATATCCTGGAGTTACTGTaGGAGTATCTGCCACTCATCTCACTGCCACTCATA +
Preference number: 6 (lower is better)
Translates to: FLDDLADILELL*EYLPLISLPLI
Trigger: TATGAGTGGCAGTGAGATGAGTGGCAGATACTCCCACAGTAACTCCAGGATATCTGCGAGGTCATCTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 72 bp GCTGCAGAGTACTCTCAAAGGCTCTCTGTAACTCCTTaGCTTGCTCTTCAAACTCAAAGAGAAAGAGCACCT +
Preference number: 6 (lower is better)
Translates to: AAEYSQRLSVTP*LALQTQRERAP
Trigger: AGGTGCTCTTTCTCTTTGAGTTTGAAGAGCAAGCAAAGGAGTTACAGAGAGCCTTTGAGAGTACTCTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 72 bp CCTCCAATCGTGGCTACTTCCATCTGTGTGCATGGATaGACAAATCGAACAGGAATTCCTTCAGAATTCTTC +
Preference number: 6 (lower is better)
Translates to: PPIVATSICVHG*TNRTGIPSEFF
Trigger: GAAGAATTCTGAAGGAATTCCTGTTCGATTTGTTCATCCATGCACACAGATGGAAGTAGCCACGATTGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 72 bp GCCTTCTCCAAAATCATCCTGGTGGATCTGCTCCTCTaGGATCACTTCAAAGTCTTTTGTCATCATAATCAG +
Preference number: 6 (lower is better)
Translates to: AFSKIILVDLLL*DHFKVFCHHNQ
Trigger: CTGATTATGATGACAAAAGACTTTGAAGTGATCGCAGAGGAGCAGATCCACCAGGATGATTTTGGAGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CCA 72 bp CTCTCCTCCAATCGTGGCTACTTCCATCTGTGTGCATaGATGAACAAATCGAACAGGAATTCCTTCAGAATT +
Preference number: 6 (lower is better)
Translates to: LSSNRGYFHLCA*MNKSNRNSFRI
Trigger: AATTCTGAAGGAATTCCTGTTCGATTTGTTCATCCATGCACACAGATGGAAGTAGCCACGATTGGAGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 72 bp AATGCAGCCACTTCCATCCTCTGGAAGAAAACCTTCTaGCACCAAAGAAATTTCAGTCTTCACTTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: NAATSILWKKTF*HQRNFSLHFSS
Trigger: AGAAGAGAAGTGAAGACTGAAATTTCTTTGGTGGCAGAAGGTTTTCTTCCAGAGGATGGAAGTGGCTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS GCA 72 bp AAAGTGTCGTCTTCAACCCAGGTGAGAAAGCTCAACTaGAGTGCGTTTACTTCTTCTTCTTCTTCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: KVSSSTQVRKLN*SAFTSSSSSSS
Trigger: TGAAGAAGAAGAAGAAGAAGAAGTAAACGCACTGCAGTTGAGCTTTCTCACCTGGGTTGAAGACGACACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS TCA 72 bp TCCACATTTTCGAGAAAGACCTTGGGGTTATGGTCATaGATCAGATTGAGGTTAATTCTCAGTTTCCTCATG +
Preference number: 6 (lower is better)
Translates to: STFSRKTLGLWS*IRLRLILSFLM
Trigger: CATGAGGAAACTGAGAATTAACCTCAATCTGATTCATGACCATAACCCCAAGGTCTTTCTCGAAAATGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3
CDS CAA 72 bp ACCGCCTGGTACTGTGGTGAGTCTGGACGATATAACTaGAGAGCTTCTTTATACAAGTTTTTATCTTTTATC +
Preference number: 6 (lower is better)
Translates to: TAWYCGESGRYN*RASLYKFLSFI
Trigger: GATAAAAGATAAAAACTTGTATAAAGAAGCTCTCAAGTTATATCGTCCAGACTCACCACAGTACCAGGCGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030140.3