Pregenerated sensors for ELOVL7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021696Ensembl transcript IDs: ENSMUST00000022207.10, ENSMUST00000225550.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTGGGTCTTTGCCCTGTTTGAGTCTTTGGGATTGCTTGTGTATGTaGCAGTGTCTACCATCCCATCCCATCTTAACCCAGGCTGGACAC | + |
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Preference number: 1 (lower is better) Translates to: VGSLPCLSLWDCLCM*QCLPSHPILTQAGH Trigger: GTGTCCAGCCTGGGTTAAGATGGGATGGGATGGTAGACACTGGCACATACACAAGCAATCCCAAAGACTCAAACAGGGCAAAGACCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR TCA 90 bp | AAACTCCACTTGACCGAATACTGCTTACACAAACCCTACAACCAGTaGCACTCACTCTGCTCCAGGAACACTTACCTGGGGGACACTGAC | + |
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Preference number: 1 (lower is better) Translates to: KLHLTEYCLHKPYNQ*HSLCSRNTYLGDTD Trigger: GTCAGTGTCCCCCAGGTAAGTGTTCCTGGAGCAGAGTGAGTGTCACTGGTTGTAGGGTTTGTGTAAGCAGTATTCGGTCAAGTGGAGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR CCA 90 bp | GTGTATGTGCCAGTGTCTACCATCCCATCCCATCTTAACCCAGGCTaGACACACAGAGTCAAAGTAGGAAAACATGGATCCCTGAGACCT | + |
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Preference number: 1 (lower is better) Translates to: VYVPVSTIPSHLNPG*THRVKVGKHGSLRP Trigger: AGGTCTCAGGGATCCATGTTTTCCTACTTTGACTCTGTGTGTCCAGCCTGGGTTAAGATGGGATGGGATGGTAGACACTGGCACATACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR CCA 90 bp | AACCCTACAACCAGTGACACTCACTCTGCTCCAGGAACACTTACCTaGGGGACACTGACTGTCAACCTTAATCTGTTTCCATGTAACTTC | + |
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Preference number: 1 (lower is better) Translates to: NPTTSDTHSAPGTLT*GTLTVNLNLFPCNF Trigger: GAAGTTACATGGAAACAGATTAAGGTTGACAGTCAGTGTCCCCCAGGTAAGTGTTCCTGGAGCAGAGTGAGTGTCACTGGTTGTAGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR GCA 90 bp | GAATTTGTGAATGGCAGGACATGGCCTCCTGTTGTACCTATGCTGTaGTGTTTGAACATCCATCTGCGGGGTGATAAGATACAGGCAATT | + |
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Preference number: 1 (lower is better) Translates to: EFVNGRTWPPVVPML*CLNIHLRGDKIQAI Trigger: AATTGCCTGTATCTTATCACCCCGCAGATGGATGTTCAAACAGCACAGCATAGGTACAACAGGAGGCCATGTCCTGCCATTCACAAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR CCA 90 bp | GTTGAGACAAATCATCTTGTTTGCAACATAAAGTTACCTCCACCTTaGGCTCAAAGGCATCAGTGCGGATACCATAGCATCACAGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: VETNHLVCNIKLPPP*AQRHQCGYHSITAS Trigger: AGAGGCTGTGATGCTATGGTATCCGCACTGATGCCTTTGAGCCCAAGGTGGAGGTAACTTTATGTTGCAAACAAGATGATTTGTCTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR TCA 90 bp | CAGGACATAACACCCCTTGTTTATTTGTTAACCAAATCTTGCCTCTaGTACTCGGCACCACTCAACTCTGGTTGCTTCATAAGCCGTTTG | + |
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Preference number: 1 (lower is better) Translates to: QDITPLVYLLTKSCL*YSAPLNSGCFISRL Trigger: CAAACGGCTTATGAAGCAACCAGAGTTGAGTGGTGCCGAGTATCAGAGGCAAGATTTGGTTAACAAATAAACAAGGGGTGTTATGTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR TCA 90 bp | TCTGGTAGGCTGGTCCCATTGCACATAACCCATAGTAAGAATACATaGCCACGTGCACAGCTGTATTTAAAAAGGCATGGAATGTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: SGRLVPLHITHSKNT*PRAQLYLKRHGMFP Trigger: TGGGAACATTCCATGCCTTTTTAAATACAGCTGTGCACGTGGTCATGTATTCTTACTATGGGTTATGTGCAATGGGACCAGCCTACCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225550.2 |
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| 3UTR CCA 90 bp | TCATACCCTCCTCTTGATGTAGCAAGATGTATTAAGACCTCTGATTaGTTTGAAAGGCAACATGAAACCTCCTGGCTGTTCCAGGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: SYPPLDVARCIKTSD*FERQHETSWLFQAL Trigger: AAGAGCCTGGAACAGCCAGGAGGTTTCATGTTGCCTTTCAAACCAATCAGAGGTCTTAATACATCTTGCTACATCAAGAGGAGGGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACACACATGTCCATATaGTGCCACAGATTTATTATAGCAAAGAGAGCAAGTCCAACTTCT | + |
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Preference number: 1 (lower is better) Translates to: THTHTHTHTHTHMSI*CHRFIIAKRASPTS Trigger: AGAAGTTGGACTTGCTCTCTTTGCTATAATAAATCTGTGGCATCATATGGACATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR TCA 90 bp | GAAGTTAATTGTAGAATCGTCATTAGCAAAGCGTTCATTAACCGTTaGGACAAATCATCTTGTTTGCAACATAAAGTTACCTCCACCTTG | + |
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Preference number: 1 (lower is better) Translates to: EVNCRIVISKAFINR*DKSSCLQHKVTSTL Trigger: CAAGGTGGAGGTAACTTTATGTTGCAAACAAGATGATTTGTCTCAACGGTTAATGAACGCTTTGCTAATGACGATTCTACAATTAACTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR CAA 90 bp | GTGAATGGCAGGACATGGCCTCCTGTTGTACCTATGCTGTGCTGTTaGAACATCCATCTGCGGGGTGATAAGATACAGGCAATTCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: VNGRTWPPVVPMLCC*NIHLRGDKIQAIPV Trigger: CACTGGAATTGCCTGTATCTTATCACCCCGCAGATGGATGTTCAAACAGCACAGCATAGGTACAACAGGAGGCCATGTCCTGCCATTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR-3UTR TCA 90 bp | CATCTGCGGGGTGATAAGATACAGGCAATTCCAGTGGGCATTTTGAACCACTCTAAACCCTACAACCAGTaGCACTCACTCTGCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: HLRGDKIQAIPVGILNHSKPYNQ*HSLCSR Trigger: CCTGGAGCAGAGTGAGTGTCACTGGTTGTAGGGTTT...AGAGTGGTTCAAAATGCCCACTGGAATTGCCTGTATCTTATCACCCCGCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR-3UTR GCA 90 bp | GTTGGGTCTTTGCCCTGTTTGAGTCTTTGGGATTGCTTGTGTATGTGCCAGTGTGCCTCTAACAGCTTGTaGATGAGTTGGGAGGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: VGSLPCLSLWDCLCMCQCASNSL*MSWEEV Trigger: GACTTCCTCCCAACTCATGCACAAGCTGTTAGAGGC...ACACTGGCACATACACAAGCAATCCCAAAGACTCAAACAGGGCAAAGACCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR-3UTR GCA 90 bp | ACCTCTGATTGGTTTGAAAGGCAACATGAAACCTCCTGGCTGTTCCAGGCTCTTGCCTCTAACAGCTTGTaGATGAGTTGGGAGGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: TSDWFERQHETSWLFQALASNSL*MSWEEV Trigger: GACTTCCTCCCAACTCATGCACAAGCTGTTAGAGGC...AAGAGCCTGGAACAGCCAGGAGGTTTCATGTTGCCTTTCAAACCAATCAGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTTACACAAACCCTACAACCAGTGACACTCACTCTGCTCCAGGAACACTTTACTTAGAGGAGGGGTaGAGAGGGTATGGAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: TAYTNPTTSDTHSAPGTLYLEEG*RGYGAR Trigger: TCTTGCTCCATACCCTCTCCACCCCTCCTCTAAGTA...AAGTGTTCCTGGAGCAGAGTGAGTGTCACTGGTTGTAGGGTTTGTGTAAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR CAA 90 bp | TTCAATTCCGTTGGGTCTTTGCCCTGTTTGAGTCTTTGGGATTGCTaGTGTATGTGCCAGTGTCTACCATCCCATCCCATCTTAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: FNSVGSLPCLSLWDC*CMCQCLPSHPILTQ Trigger: CTGGGTTAAGATGGGATGGGATGGTAGACACTGGCACATACACAAGCAATCCCAAAGACTCAAACAGGGCAAAGACCCAACGGAATTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR-3UTR TCA 90 bp | ACCTCTGATTGGTTTGAAAGGCAACATGAAACCTCCTGGCTGTTCCAGGCTCTTAACATAAGGGATGAGTaGCAGACAGAACCCAGCATC | + |
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Preference number: 2 (lower is better) Translates to: TSDWFERQHETSWLFQALNIRDE*QTEPSI Trigger: GATGCTGGGTTCTGTCTGTCACTCATCCCTTATGTT...AAGAGCCTGGAACAGCCAGGAGGTTTCATGTTGCCTTTCAAACCAATCAGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR-3UTR TCA 90 bp | CACTTAGGCTTCACTTGTGTTAGCACTTCAGAACTGAGCCCTAGAACGAGTGTATCTGAACATAAGGGATaGGTGACAGACAGAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: HLGFTCVSTSELSPRTSVSEHKG*VTDRTQ Trigger: CTGGGTTCTGTCTGTCACTCATCCCTTATGTTCAGA...TACACTCGTTCTAGGGCTCAGTTCTGAAGTGCTAACACAAGTGAAGCCTAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR CAA 90 bp | CCTGTCTTAGTCTCTATTTTCAATTCCGTTGGGTCTTTGCCCTGTTaGAGTCTTTGGGATTGCTTGTGTATGTGCCAGTGTCTACCATCC | + |
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Preference number: 2 (lower is better) Translates to: PVLVSIFNSVGSLPC*SLWDCLCMCQCLPS Trigger: GGATGGTAGACACTGGCACATACACAAGCAATCCCAAAGACTCAAACAGGGCAAAGACCCAACGGAATTGAAAATAGAGACTAAGACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR-3UTR TCA 90 bp | CACAATATGGCTTATAGGTCTGAAGAAATGGAAATCACACACACACACACACACTCCAGGCTCTTCCACTaGGAAGACTTATCTGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: HNMAYRSEEMEITHTHTHSRLFH*EDLSGS Trigger: GCTCCCAGATAAGTCTTCTCAGTGGAAGAGCCTGGA...GTGTGTGTGTGTGTGTGTGATTTCCATTTCTTCAGACCTATAAGCCATATTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGGGTCTTTGCCCTGTTTGAGTCTTTGGGATTGCTTGTGTATGTGCCAGTGTCTTATCTGGGAGCTTTaGACTCTCAGAGATCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: VGSLPCLSLWDCLCMCQCLIWEL*TLRDQK Trigger: TTTCTGATCTCTGAGAGTCCAAAGCTCCCAGATAAG...ACACTGGCACATACACAAGCAATCCCAAAGACTCAAACAGGGCAAAGACCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTTATAGGTCTGAAGAAATGGAAATCACACACACACACACACACACACACCAACATGAAACCTCCTaGCTGTTCCAGGCTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: MAYRSEEMEITHTHTHTHQHETS*LFQALP Trigger: TGGAAGAGCCTGGAACAGCCAGGAGGTTTCATGTTG...GTGTGTGTGTGTGTGTGTGTGTGTGATTTCCATTTCTTCAGACCTATAAGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGTCTACCATCCCATCCCATCTTAACCCAGGCTGGACACACAGAGTCAAAATTAAGACCTCTGATTaGTTTGAAAGGCAACATGAA | + |
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Preference number: 2 (lower is better) Translates to: PVSTIPSHLNPGWTHRVKIKTSD*FERQHE Trigger: TTCATGTTGCCTTTCAAACCAATCAGAGGTCTTAAT...TTTGACTCTGTGTGTCCAGCCTGGGTTAAGATGGGATGGGATGGTAGACACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR-3UTR CCA 90 bp | AGTCTCCATTGTAAATTCAGGTTGTGTCTGTATTTTAGTGGCGCTTGCTTTTGCGCAACCTCTGACCCTTaGTGTAAGCACGGTACCAAA | + |
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Preference number: 2 (lower is better) Translates to: SLHCKFRLCLYFSGACFCATSDP*CKHGTK Trigger: TTTGGTACCGTGCTTACACCAAGGGTCAGAGGTTGC...GCAAAAGCAAGCGCCACTAAAATACAGACACAACCTGAATTTACAATGGAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225550.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGCAGGCAAAACTCATAGTTTATGGTCAATGAGGACTCAGGCTTTATTGCAACCACTCAACTCTGGTTaGTTCATAAGCCGTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: RAGKTHSLWSMRTQALLQPLNSG*FISRLH Trigger: ATGCAAACGGCTTATGAAGCAACCAGAGTTGAGTGG...TTGCAATAAAGCCTGAGTCCTCATTGACCATAAACTATGAGTTTTGCCTGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR-3UTR CCA 90 bp | CATCTGCGGGGTGATAAGATACAGGCAATTCCAGTGGGCATTTTGAACCACTCTAAAACTCATAGTTTATaGTCAATGAGGACTCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: HLRGDKIQAIPVGILNHSKTHSL*SMRTQA Trigger: AGCCTGAGTCCTCATTGACCATAAACTATGAGTTTT...AGAGTGGTTCAAAATGCCCACTGGAATTGCCTGTATCTTATCACCCCGCAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR CAA 90 bp | CTGGCTGTTCCAGGCTCTTCCACTGAGAAGACTTATCTGGGAGCTTaGGACTCTCAGAGATCAGAAACCCAAATAACTTATCATAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: LAVPGSSTEKTYLGA*DSQRSETQITYHKN Trigger: ATTTTTATGATAAGTTATTTGGGTTTCTGATCTCTGAGAGTCCAAAGCTCCCAGATAAGTCTTCTCAGTGGAAGAGCCTGGAACAGCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR CAA 90 bp | TATCTCTCAGGACATAACACCCCTTGTTTATTTGTTAACCAAATCTaGCCTCTGATACTCGGCACCACTCAACTCTGGTTGCTTCATAAG | + |
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Preference number: 2 (lower is better) Translates to: YLSGHNTPCLFVNQI*PLILGTTQLWLLHK Trigger: CTTATGAAGCAACCAGAGTTGAGTGGTGCCGAGTATCAGAGGCAAGATTTGGTTAACAAATAAACAAGGGGTGTTATGTCCTGAGAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR CAA 90 bp | GTAAATGTTGGATCCTTTGGAACTAGAGTTACAGACAGTTGTGAGTaGTCAAGTAAGAACCAAACCCAGGTCCTCTGCCAAAACGATAAG | + |
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Preference number: 2 (lower is better) Translates to: VNVGSFGTRVTDSCE*SSKNQTQVLCQNDK Trigger: CTTATCGTTTTGGCAGAGGACCTGGGTTTGGTTCTTACTTGACAACTCACAACTGTCTGTAACTCTAGTTCCAAAGGATCCAACATTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR-3UTR TCA 90 bp | CCACATGAATCTCAGCCCTTCACAATATGGCTTATAGGTCTGAAGAAATGGAAATTAGGGAATGCCACATaGATCTCAGCCCTTCACAAT | + |
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Preference number: 2 (lower is better) Translates to: PHESQPFTIWLIGLKKWKLGNAT*ISALHN Trigger: ATTGTGAAGGGCTGAGATTCATGTGGCATTCCCTAA...TTTCCATTTCTTCAGACCTATAAGCCATATTGTGAAGGGCTGAGATTCATGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGTTCTCCGAAGAGGAAAAGGAAATAATATTGACATCTTCACAAGCGTCCAAAACATAAGGGATGAGTaGCAGACAGAACCCAGCATC | + |
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Preference number: 2 (lower is better) Translates to: KVLRRGKGNNIDIFTSVQNIRDE*QTEPSI Trigger: GATGCTGGGTTCTGTCTGTCACTCATCCCTTATGTT...TTGGACGCTTGTGAAGATGTCAATATTATTTCCTTTTCCTCTTCGGAGAACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGTATGTCTTGATTGTCAAGGAAGGCAAGATATCAGTCTCCATTGTAAATTCTCTGAACATAAGGGATaGGTGACAGACAGAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: QVCLDCQGRQDISLHCKFSEHKG*VTDRTQ Trigger: CTGGGTTCTGTCTGTCACTCATCCCTTATGTTCAGA...GAATTTACAATGGAGACTGATATCTTGCCTTCCTTGACAATCAAGACATACTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCTCCGAAGAGGAAAAGGAAATAATATTGACATCTTCACAAGCGTCCAAGTATTAGGGAATGCCACATaGATCTCAGCCCTTCACAAT | + |
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Preference number: 2 (lower is better) Translates to: VLRRGKGNNIDIFTSVQVLGNAT*ISALHN Trigger: ATTGTGAAGGGCTGAGATTCATGTGGCATTCCCTAA...TACTTGGACGCTTGTGAAGATGTCAATATTATTTCCTTTTCCTCTTCGGAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR-3UTR CCA 90 bp | ATGATGCCACAGATTTATTATAGCAAAGAGAGCAAGTCCAACTTCTCAAAACTTCAACATGAAACCTCCTaGCTGTTCCAGGCTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: MMPQIYYSKESKSNFSKLQHETS*LFQALP Trigger: TGGAAGAGCCTGGAACAGCCAGGAGGTTTCATGTTG...AAGTTTTGAGAAGTTGGACTTGCTCTCTTTGCTATAATAAATCTGTGGCATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAGGCAAAACTCATAGTTTATGGTCAATGAGGACTCAGGCTTTATTGCAACAGCCCTTCACAATATaGCTTATAGGTCTGAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: RAGKTHSLWSMRTQALLQQPFTI*LIGLKK Trigger: TTTCTTCAGACCTATAAGCCATATTGTGAAGGGCTG...TTGCAATAAAGCCTGAGTCCTCATTGACCATAAACTATGAGTTTTGCCTGCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR-3UTR TCA 90 bp | CAAGTATGTCTTGATTGTCAAGGAAGGCAAGATATCAGTCTCCATTGTAAATTCAATTGCAGTCCTCCATaGAGAAGATCTGGCCTATGT | + |
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Preference number: 2 (lower is better) Translates to: QVCLDCQGRQDISLHCKFNCSPP*RRSGLC Trigger: ACATAGGCCAGATCTTCTTCATGGAGGACTGCAATT...GAATTTACAATGGAGACTGATATCTTGCCTTCCTTGACAATCAAGACATACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225550.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAAATTAATATGTGATTCAGAAGCACCTGAGGTAAGCCAATCACATGAACACCCACTCAACTCTGGTTaGTTCATAAGCCGTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: QKLICDSEAPEVSQSHEHPLNSG*FISRLH Trigger: ATGCAAACGGCTTATGAAGCAACCAGAGTTGAGTGG...GTGTTCATGTGATTGGCTTACCTCAGGTGCTTCTGAATCACATATTAATTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGTCTTTATCTCTCAGGACATAACACCCCTTGTTTATTTGTTAACCAAATCTCAGATCTTGTGGCAATaGCCCAGAAGACCATTCAAA | + |
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Preference number: 2 (lower is better) Translates to: SVFISQDITPLVYLLTKSQILWQ*PRRPFK Trigger: TTTGAATGGTCTTCTGGGTCATTGCCACAAGATCTG...AGATTTGGTTAACAAATAAACAAGGGGTGTTATGTCCTGAGAGATAAAGACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGTTCTCCGAAGAGGAAAAGGAAATAATATTGACATCTTCACAAGCGTCCAAGGACTCAGGCTTTATTaGAAAATGAGCAACGTTGTG | + |
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Preference number: 2 (lower is better) Translates to: KVLRRGKGNNIDIFTSVQGLRLY*KMSNVV Trigger: CACAACGTTGCTCATTTTGCAATAAAGCCTGAGTCC...TTGGACGCTTGTGAAGATGTCAATATTATTTCCTTTTCCTCTTCGGAGAACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR CAA 90 bp | GATTGTCAAGGAAGGCAAGATATCAGTCTCCATTGTAAATTCAGGTaGTGTCTGTATTTTAGTGGCGCTTGCTTTTGCAATTTCCATTTT | + |
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Preference number: 2 (lower is better) Translates to: DCQGRQDISLHCKFR*CLYFSGACFCNFHF Trigger: AAAATGGAAATTGCAAAAGCAAGCGCCACTAAAATACAGACACAACCTGAATTTACAATGGAGACTGATATCTTGCCTTCCTTGACAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225550.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCTTTATCTCTCAGGACATAACACCCCTTGTTTATTTGTTAACCAAATCTCTTATCTGGGAGCTTTaGACTCTCAGAGATCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: SVFISQDITPLVYLLTKSLIWEL*TLRDQK Trigger: TTTCTGATCTCTGAGAGTCCAAAGCTCCCAGATAAG...AGATTTGGTTAACAAATAAACAAGGGGTGTTATGTCCTGAGAGATAAAGACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGTTATTATACTGCAACAGATTATACCTTTCCTCATTGAATCCAACAGTCCCCTCTTTTCAGATATaGACAGAAGTTAATTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: RVLLYCNRLYLSSLNPTVPSFQI*TEVNCR Trigger: TCTACAATTAACTTCTGTGCATATCTGAAAAGAGGG...GACTGTTGGATTCAATGAGGAAAGGTATAATCTGTTGCAGTATAATAACACTCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR GCA 72 bp | TCCGTTGGGTCTTTGCCCTGTTTGAGTCTTTGGGATTaGTTGTGTATGTGCCAGTGTCTACCATCCCATCCC | + |
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Preference number: 3 (lower is better) Translates to: SVGSLPCLSLWD*LCMCQCLPSHP Trigger: GGGATGGGATGGTAGACACTGGCACATACACAAGCAATCCCAAAGACTCAAACAGGGCAAAGACCCAACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR-3UTR CAA 90 bp | GTTGGGTCTTTGCCCTGTTTGAGTCTTTGGGATTGCTTGTGTATGTGCCAGTGTCAGCTTGTGCATGAGTaGGGAGGAAGTCTTATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: VGSLPCLSLWDCLCMCQCQLVHE*GGSLMG Trigger: GCCCATAAGACTTCCTCCCAACTCATGCACAAGCTG...ACACTGGCACATACACAAGCAATCCCAAAGACTCAAACAGGGCAAAGACCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR TCA 72 bp | TTGACCGAATACTGCTTACACAAACCCTACAACCAGTaGCACTCACTCTGCTCCAGGAACACTTACCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LTEYCLHKPYNQ*HSLCSRNTYLG Trigger: CCCCAGGTAAGTGTTCCTGGAGCAGAGTGAGTGTCACTGGTTGTAGGGTTTGTGTAAGCAGTATTCGGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR CCA 72 bp | CCAGTGTCTACCATCCCATCCCATCTTAACCCAGGCTaGACACACAGAGTCAAAGTAGGAAAACATGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: PVSTIPSHLNPG*THRVKVGKHGS Trigger: GGATCCATGTTTTCCTACTTTGACTCTGTGTGTCCAGCCTGGGTTAAGATGGGATGGGATGGTAGACACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR CCA 72 bp | ACCAGTGACACTCACTCTGCTCCAGGAACACTTACCTaGGGGACACTGACTGTCAACCTTAATCTGTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TSDTHSAPGTLT*GTLTVNLNLFP Trigger: TGGAAACAGATTAAGGTTGACAGTCAGTGTCCCCCAGGTAAGTGTTCCTGGAGCAGAGTGAGTGTCACTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR TCA 72 bp | CCTAGAACGAGTGTAATGTTGTCTGAACATAAGGGATaGGTGACAGACAGAACCCAGCATCAGGGGTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PRTSVMLSEHKG*VTDRTQHQGFP Trigger: TGGGAACCCCTGATGCTGGGTTCTGTCTGTCACTCATCCCTTATGTTCAGACAACATTACACTCGTTCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR GCA 72 bp | ATAAAGTTACCTCCACCTTGGGCTCAAAGGCATCAGTaGGGATACCATAGCATCACAGCCTCTAACAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: IKLPPPWAQRHQ*GYHSITASNSL Trigger: CAAGCTGTTAGAGGCTGTGATGCTATGGTATCCGCACTGATGCCTTTGAGCCCAAGGTGGAGGTAACTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR GCA 72 bp | AATGGCAGGACATGGCCTCCTGTTGTACCTATGCTGTaGTGTTTGAACATCCATCTGCGGGGTGATAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: NGRTWPPVVPML*CLNIHLRGDKI Trigger: TATCTTATCACCCCGCAGATGGATGTTCAAACAGCACAGCATAGGTACAACAGGAGGCCATGTCCTGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR CCA 72 bp | TGGCTGTTCCAGGCTCTTCCACTGAGAAGACTTATCTaGGAGCTTTGGACTCTCAGAGATCAGAAACCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: WLFQALPLRRLI*ELWTLRDQKPK Trigger: TTTGGGTTTCTGATCTCTGAGAGTCCAAAGCTCCCAGATAAGTCTTCTCAGTGGAAGAGCCTGGAACAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACATGTCCATATGATGCCACAGATTACAGCCTCTAACAGCTaGTGCATGAGTTGGGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHTHTHVHMMPQITASNS*CMSWEE Trigger: TTCCTCCCAACTCATGCACAAGCTGTTAGAGGCTGT...AATCTGTGGCATCATATGGACATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTGTCTACCATCCCATCCCATCTTAACCCAGGCTGGACACACAGAGTCAAAACACCCCTTGTTTATTaGTTAACCAAATCTTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PVSTIPSHLNPGWTHRVKTPLVY*LTKSCL Trigger: GAGGCAAGATTTGGTTAACAAATAAACAAGGGGTGT...TTTGACTCTGTGTGTCCAGCCTGGGTTAAGATGGGATGGGATGGTAGACACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR CCA 72 bp | ACCTCTGATTGGTTTGAAAGGCAACATGAAACCTCCTaGCTGTTCCAGGCTCTTCCACTGAGAAGACTTATC | + |
|
Preference number: 3 (lower is better) Translates to: TSDWFERQHETS*LFQALPLRRLI Trigger: GATAAGTCTTCTCAGTGGAAGAGCCTGGAACAGCCAGGAGGTTTCATGTTGCCTTTCAAACCAATCAGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR CCA 72 bp | TTCAATTCCGTTGGGTCTTTGCCCTGTTTGAGTCTTTaGGATTGCTTGTGTATGTGCCAGTGTCTACCATCC | + |
|
Preference number: 3 (lower is better) Translates to: FNSVGSLPCLSL*DCLCMCQCLPS Trigger: GGATGGTAGACACTGGCACATACACAAGCAATCCCAAAGACTCAAACAGGGCAAAGACCCAACGGAATTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGACAGTTGTGAGTTGTCAAGTAAGAACCAAACCCAGGTCCTCTGCCAAAACGCAAGGTGTACTGATTTaGAAAAGTTCTCCGAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QTVVSCQVRTKPRSSAKTQGVLI*KSSPKR Trigger: CCTCTTCGGAGAACTTTTCAAAATCAGTACACCTTG...CGTTTTGGCAGAGGACCTGGGTTTGGTTCTTACTTGACAACTCACAACTGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCTTATAGGTCTGAAGAAATGGAAATCACACACACACACACACACACACACGGTAGGCTGGTCCCATaGCACATAACCCATAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: MAYRSEEMEITHTHTHTHGRLVP*HITHSK Trigger: CTTACTATGGGTTATGTGCAATGGGACCAGCCTACC...GTGTGTGTGTGTGTGTGTGTGTGTGATTTCCATTTCTTCAGACCTATAAGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225550.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATACCCTCCTCTTGATGTAGCAAGATGTATTAAGACCTCTGATTGGTTTGAACAGCTTGTGCATGAGTaGGGAGGAAGTCTTATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SYPPLDVARCIKTSDWFEQLVHE*GGSLMG Trigger: GCCCATAAGACTTCCTCCCAACTCATGCACAAGCTG...TTCAAACCAATCAGAGGTCTTAATACATCTTGCTACATCAAGAGGAGGGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAATATGGCTTATAGGTCTGAAGAAATGGAAATCACACACACACACACACACAAAGTTACCTCCACCTaGGGCTCAAAGGCATCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HNMAYRSEEMEITHTHTHKVTST*GSKASV Trigger: CACTGATGCCTTTGAGCCCAAGGTGGAGGTAACTTT...GTGTGTGTGTGTGTGTGTGATTTCCATTTCTTCAGACCTATAAGCCATATTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR TCA 72 bp | TCTCTATTTTCAATTCCGTTGGGTCTTTGCCCTGTTTaGGTCTTTGGGATTGCTTGTGTATGTGCCAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SLFSIPLGLCPV*VFGIACVCASV Trigger: GACACTGGCACATACACAAGCAATCCCAAAGACTCAAACAGGGCAAAGACCCAACGGAATTGAAAATAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR CCA 72 bp | AATCATCTTGTTTGCAACATAAAGTTACCTCCACCTTaGGCTCAAAGGCATCAGTGCGGATACCATAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: NHLVCNIKLPPP*AQRHQCGYHSI Trigger: GATGCTATGGTATCCGCACTGATGCCTTTGAGCCCAAGGTGGAGGTAACTTTATGTTGCAAACAAGATGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAAAACTGGGTACTGGTAATTGCAGTCCTCCATGAAGAAGATCTGGCCTATATAGGCAAGTATGTCTaGATTGTCAAGGAAGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QKNWVLVIAVLHEEDLAYIGKYV*IVKEGK Trigger: CTTGCCTTCCTTGACAATCAAGACATACTTGCCTAT...ATAGGCCAGATCTTCTTCATGGAGGACTGCAATTACCAGTACCCAGTTTTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225550.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCTTATAGGTCTGAAGAAATGGAAATCACACACACACACACACACACACACACTTATCTGGGAGCTTaGGACTCTCAGAGATCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: MAYRSEEMEITHTHTHTHTYLGA*DSQRSE Trigger: TTCTGATCTCTGAGAGTCCAAAGCTCCCAGATAAGT...GTGTGTGTGTGTGTGTGTGTGTGTGATTTCCATTTCTTCAGACCTATAAGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR TCA 72 bp | GTTGGGAGGAAGTCTTATGGGCAGATCTTGTGGCAATaGCCCAGAAGACCATTCAAACTTACCATTAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: VGRKSYGQILWQ*PRRPFKLTINK Trigger: TTTGTTAATGGTAAGTTTGAATGGTCTTCTGGGTCATTGCCACAAGATCTGCCCATAAGACTTCCTCCCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR TCA 72 bp | ACACCCCTTGTTTATTTGTTAACCAAATCTTGCCTCTaGTACTCGGCACCACTCAACTCTGGTTGCTTCATA | + |
|
Preference number: 3 (lower is better) Translates to: TPLVYLLTKSCL*YSAPLNSGCFI Trigger: TATGAAGCAACCAGAGTTGAGTGGTGCCGAGTATCAGAGGCAAGATTTGGTTAACAAATAAACAAGGGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR TCA 72 bp | AGGAGAGGGCAGGCAAAACTCATAGTTTATGGTCAATaGGGACTCAGGCTTTATTGCAAAATGAGCAACGTT | + |
|
Preference number: 3 (lower is better) Translates to: RRGQAKLIVYGQ*GLRLYCKMSNV Trigger: AACGTTGCTCATTTTGCAATAAAGCCTGAGTCCTCATTGACCATAAACTATGAGTTTTGCCTGCCCTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR CCA 72 bp | ATGGATCAGGAGAGGGCAGGCAAAACTCATAGTTTATaGTCAATGAGGACTCAGGCTTTATTGCAAAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: MDQERAGKTHSL*SMRTQALLQNE Trigger: CTCATTTTGCAATAAAGCCTGAGTCCTCATTGACCATAAACTATGAGTTTTGCCTGCCCTCTCCTGATCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGCTTATCAAGAATCCACTTAGGCTTCACTTGTGTTAGCACTTCAGAACTGAGACCTCTGATTGGTTaGAAAGGCAACATGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: ESLSRIHLGFTCVSTSELRPLIG*KGNMKP Trigger: AGGTTTCATGTTGCCTTTCAAACCAATCAGAGGTCT...CAGTTCTGAAGTGCTAACACAAGTGAAGCCTAAGTGGATTCTTGATAAGCTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTCCGAAGAGGAAAAGGAAATAATATTGACATCTTCACAAGCGTCCAAGTACCATCCTCATTGCTCTaGGCGACTGAGAATAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: VLRRGKGNNIDIFTSVQVPSSLL*ATENSQ Trigger: TTGACTATTCTCAGTCGCCAAGAGCAATGAGGATGG...TACTTGGACGCTTGTGAAGATGTCAATATTATTTCCTTTTCCTCTTCGGAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225550.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTCTTTATCTCTCAGGACATAACACCCCTTGTTTATTTGTTAACCAAATCTCCACCTGCAGCAAATTaGACTCCAAACCACCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SVFISQDITPLVYLLTKSPPAAN*TPNHQV Trigger: GACCTGGTGGTTTGGAGTCAAATTTGCTGCAGGTGG...AGATTTGGTTAACAAATAAACAAGGGGTGTTATGTCCTGAGAGATAAAGACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225550.2 |
||
| 3UTR TCA 72 bp | CACACACACACACACACACACACACACATGTCCATATaGTGCCACAGATTTATTATAGCAAAGAGAGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHTHMSI*CHRFIIAKRAS Trigger: ACTTGCTCTCTTTGCTATAATAAATCTGTGGCATCATATGGACATGTGTGTGTGTGTGTGTGTGTGTGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR GCA 72 bp | AAGCGTTCATTAACCGTTGAGACAAATCATCTTGTTTaGAACATAAAGTTACCTCCACCTTGGGCTCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KRSLTVETNHLV*NIKLPPPWAQR Trigger: CCTTTGAGCCCAAGGTGGAGGTAACTTTATGTTGCAAACAAGATGATTTGTCTCAACGGTTAATGAACGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR CCA 72 bp | AAAACCTCCTGTCTTAGTCTCTATTTTCAATTCCGTTaGGTCTTTGCCCTGTTTGAGTCTTTGGGATTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: KTSCLSLYFQFR*VFALFESLGLL Trigger: AAGCAATCCCAAAGACTCAAACAGGGCAAAGACCCAACGGAATTGAAAATAGAGACTAAGACAGGAGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR-3UTR CAA 90 bp | AGCCGAGGGATACAATCTCATAATTTCCCAAACTATGAAACAATGCAGTATATAGGGTCTTTGCCCTGTTaGAGTCTTTGGGATTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SRGIQSHNFPNYETMQYIGSLPC*SLWDCL Trigger: CAAGCAATCCCAAAGACTCAAACAGGGCAAAGACCC...TATATACTGCATTGTTTCATAGTTTGGGAAATTATGAGATTGTATCCCTCGGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTCCGAAGAGGAAAAGGAAATAATATTGACATCTTCACAAGCGTCCAAGTAATAGGCAAGTATGTCTaGATTGTCAAGGAAGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: VLRRGKGNNIDIFTSVQVIGKYV*IVKEGK Trigger: CTTGCCTTCCTTGACAATCAAGACATACTTGCCTAT...TACTTGGACGCTTGTGAAGATGTCAATATTATTTCCTTTTCCTCTTCGGAGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR CCA 72 bp | CATCTTCACAAGCGTCCAAGTATTGCTAAGTTGTTCTaGTTCACCGGAAAGAAGAAGGAAATTCTAGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: HLHKRPSIAKLF*FTGKKKEILES Trigger: ACTTTCTAGAATTTCCTTCTTCTTTCCGGTGAACCAGAACAACTTAGCAATACTTGGACGCTTGTGAAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTTCTCCGAAGAGGAAAAGGAAATAATATTGACATCTTCACAAGCGTCCAAACAAGCGTCCAAGTATaGCTAAGTTGTTCTGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KVLRRGKGNNIDIFTSVQTSVQV*LSCSGS Trigger: TGAACCAGAACAACTTAGCAATACTTGGACGCTTGT...TTGGACGCTTGTGAAGATGTCAATATTATTTCCTTTTCCTCTTCGGAGAACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGATGCCACAGATTTATTATAGCAAAGAGAGCAAGTCCAACTTCTCAAAACTTAGACCTCTGATTGGTTaGAAAGGCAACATGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: MMPQIYYSKESKSNFSKLRPLIG*KGNMKP Trigger: AGGTTTCATGTTGCCTTTCAAACCAATCAGAGGTCT...AAGTTTTGAGAAGTTGGACTTGCTCTCTTTGCTATAATAAATCTGTGGCATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTTCTCCGAAGAGGAAAAGGAAATAATATTGACATCTTCACAAGCGTCCAAACACCCCTTGTTTATTaGTTAACCAAATCTTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KVLRRGKGNNIDIFTSVQTPLVY*LTKSCL Trigger: GAGGCAAGATTTGGTTAACAAATAAACAAGGGGTGT...TTGGACGCTTGTGAAGATGTCAATATTATTTCCTTTTCCTCTTCGGAGAACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTCTTTATCTCTCAGGACATAACACCCCTTGTTTATTTGTTAACCAAATCTCATTGTAAATTCAGGTaGTGTCTGTATTTTAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SVFISQDITPLVYLLTKSHCKFR*CLYFSG Trigger: GCCACTAAAATACAGACACAACCTGAATTTACAATG...AGATTTGGTTAACAAATAAACAAGGGGTGTTATGTCCTGAGAGATAAAGACACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225550.2 |
||
| 3UTR TCA 72 bp | GAAGACCATTCAAACTTACCATTAACAAATTTAGAATaGGAGCTTATCAAGAATCCACTTAGGCTTCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: EDHSNLPLTNLE*ELIKNPLRLHL Trigger: CAAGTGAAGCCTAAGTGGATTCTTGATAAGCTCTCATTCTAAATTTGTTAATGGTAAGTTTGAATGGTCTTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCTTACACAAACCCTACAACCAGTGACACTCACTCTGCTCCAGGAACACTTGCTTCCGGTTCTCCATaGGCTTTGGTCCCAGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: TAYTNPTTSDTHSAPGTLASGSP*ALVPET Trigger: CGTCTCTGGGACCAAAGCTCATGGAGAACCGGAAGC...AAGTGTTCCTGGAGCAGAGTGAGTGTCACTGGTTGTAGGGTTTGTGTAAGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR CAA 72 bp | CAGTGCGGATACCATAGCATCACAGCCTCTAACAGCTaGTGCATGAGTTGGGAGGAAGTCTTATGGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QCGYHSITASNS*CMSWEEVLWAD Trigger: ATCTGCCCATAAGACTTCCTCCCAACTCATGCACAAGCTGTTAGAGGCTGTGATGCTATGGTATCCGCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| 3UTR CAA 72 bp | GTTGGGTCTTTGCCCTGTTTGAGTCTTTGGGATTGCTaGTGTATGTGCCAGTGTCTACCATCCCATCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VGSLPCLSLWDC*CMCQCLPSHPI Trigger: GATGGGATGGGATGGTAGACACTGGCACATACACAAGCAATCCCAAAGACTCAAACAGGGCAAAGACCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| 3UTR CAA 72 bp | TTCCGTTGGGTCTTTGCCCTGTTTGAGTCTTTGGGATaGCTTGTGTATGTGCCAGTGTCTACCATCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: FRWVFALFESLG*LVYVPVSTIPS Trigger: GGATGGGATGGTAGACACTGGCACATACACAAGCAATCCCAAAGACTCAAACAGGGCAAAGACCCAACGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| CDS-3UTR TCA 90 bp | CACTTAGGCTTCACTTGTGTTAGCACTTCAGAACTGAGCCCTAGAACGAGTGTAGCAGAGGCGAGGACATaGGGAGATAGTCTTCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: HLGFTCVSTSELSPRTSVAEART*GDSLQL Trigger: GAGTTGAAGACTATCTCCTCATGTCCTCGCCTCTGC...TACACTCGTTCTAGGGCTCAGTTCTGAAGTGCTAACACAAGTGAAGCCTAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGCTTATCAAGAATCCACTTAGGCTTCACTTGTGTTAGCACTTCAGAACTGCATAGAGGCCCAGGATaGTGGTTTGTGGCAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ESLSRIHLGFTCVSTSELHRGPG*WFVAEA Trigger: CGCCTCTGCCACAAACCATCATCCTGGGCCTCTATG...CAGTTCTGAAGTGCTAACACAAGTGAAGCCTAAGTGGATTCTTGATAAGCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
||
| CDS-3UTR TCA 90 bp | AGGACATGGCCTCCTGTTGTACCTATGCTGTGCTGTTTGAACATCCATCTGCGGAATTGCAGTCCTCCATaGAGAAGATCTGGCCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: RTWPPVVPMLCCLNIHLRNCSPP*RRSGLC Trigger: ACATAGGCCAGATCTTCTTCATGGAGGACTGCAATT...CCGCAGATGGATGTTCAAACAGCACAGCATAGGTACAACAGGAGGCCATGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| CDS-3UTR TCA 90 bp | AGTCTCCATTGTAAATTCAGGTTGTGTCTGTATTTTAGTGGCGCTTGCTTTTGCCATAGAGGCCCAGGATaGTGGTTTGTGGCAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLHCKFRLCLYFSGACFCHRGPG*WFVAEA Trigger: CGCCTCTGCCACAAACCATCATCCTGGGCCTCTATG...GCAAAAGCAAGCGCCACTAAAATACAGACACAACCTGAATTTACAATGGAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225550.2 |
||
| CDS-3UTR TCA 90 bp | CACTTAGGCTTCACTTGTGTTAGCACTTCAGAACTGAGCCCTAGAACGAGTGTAACCAGGTCCACGGCATaGTCGTATGATGGAAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: HLGFTCVSTSELSPRTSVTRSTA*SYDGRH Trigger: ATGTCTTCCATCATACGATCATGCCGTGGACCTGGT...TACACTCGTTCTAGGGCTCAGTTCTGAAGTGCTAACACAAGTGAAGCCTAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
||
| CDS-3UTR CCA 90 bp | CACTTAGGCTTCACTTGTGTTAGCACTTCAGAACTGAGCCCTAGAACGAGTGTAGCAACCTCTGACCCTTaGTGTAAGCACGGTACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HLGFTCVSTSELSPRTSVATSDP*CKHGTK Trigger: TTTGGTACCGTGCTTACACCAAGGGTCAGAGGTTGC...TACACTCGTTCTAGGGCTCAGTTCTGAAGTGCTAACACAAGTGAAGCCTAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| CDS-3UTR GCA 90 bp | AGGACATGGCCTCCTGTTGTACCTATGCTGTGCTGTTTGAACATCCATCTGCGGGAATACATGACCACGTaGACAGCTGTATTTAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: RTWPPVVPMLCCLNIHLREYMTT*TAVFKK Trigger: CTTTTTAAATACAGCTGTGCACGTGGTCATGTATTC...CCGCAGATGGATGTTCAAACAGCACAGCATAGGTACAACAGGAGGCCATGTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR CAA 72 bp | GGATCCTTTGGAACTAGAGTTACAGACAGTTGTGAGTaGTCAAGTAAGAACCAAACCCAGGTCCTCTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: GSFGTRVTDSCE*SSKNQTQVLCQ Trigger: TTGGCAGAGGACCTGGGTTTGGTTCTTACTTGACAACTCACAACTGTCTGTAACTCTAGTTCCAAAGGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| CDS-3UTR TCA 90 bp | TCATACCCTCCTCTTGATGTAGCAAGATGTATTAAGACCTCTGATTGGTTTGAACACCTGCAGCAAATTTaGCTCCAAACCACCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SYPPLDVARCIKTSDWFEHLQQI*LQTTRS Trigger: GGACCTGGTGGTTTGGAGTCAAATTTGCTGCAGGTG...TTCAAACCAATCAGAGGTCTTAATACATCTTGCTACATCAAGAGGAGGGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR CAA 72 bp | CCAGGCTCTTCCACTGAGAAGACTTATCTGGGAGCTTaGGACTCTCAGAGATCAGAAACCCAAATAACTTAT | + |
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Preference number: 4 (lower is better) Translates to: PGSSTEKTYLGA*DSQRSETQITY Trigger: ATAAGTTATTTGGGTTTCTGATCTCTGAGAGTCCAAAGCTCCCAGATAAGTCTTCTCAGTGGAAGAGCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| 3UTR CAA 72 bp | GGACATAACACCCCTTGTTTATTTGTTAACCAAATCTaGCCTCTGATACTCGGCACCACTCAACTCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: GHNTPCLFVNQI*PLILGTTQLWL Trigger: CAACCAGAGTTGAGTGGTGCCGAGTATCAGAGGCAAGATTTGGTTAACAAATAAACAAGGGGTGTTATGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| CDS-3UTR TCA 90 bp | AAAGTTCTCCGAAGAGGAAAAGGAAATAATATTGACATCTTCACAAGCGTCCAAGCAGAGGCGAGGACATaGGGAGATAGTCTTCAACTC | + |
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Preference number: 4 (lower is better) Translates to: KVLRRGKGNNIDIFTSVQAEART*GDSLQL Trigger: GAGTTGAAGACTATCTCCTCATGTCCTCGCCTCTGC...TTGGACGCTTGTGAAGATGTCAATATTATTTCCTTTTCCTCTTCGGAGAACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| CDS-3UTR GCA 90 bp | CACTTAGGCTTCACTTGTGTTAGCACTTCAGAACTGAGCCCTAGAACGAGTGTAAGTGGCGCTTGCTTTTaGAATTTCCATTTTCTAGAG | + |
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Preference number: 4 (lower is better) Translates to: HLGFTCVSTSELSPRTSVSGACF*NFHFLE Trigger: CTCTAGAAAATGGAAATTGCAAAAGCAAGCGCCACT...TACACTCGTTCTAGGGCTCAGTTCTGAAGTGCTAACACAAGTGAAGCCTAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| CDS-3UTR CCA 90 bp | GAGAGCTTATCAAGAATCCACTTAGGCTTCACTTGTGTTAGCACTTCAGAACTGCATTTTCTAGAGTTTTaGGCAACCTCTGACCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: ESLSRIHLGFTCVSTSELHFLEF*ATSDPW Trigger: CCAAGGGTCAGAGGTTGCCCAAAACTCTAGAAAATG...CAGTTCTGAAGTGCTAACACAAGTGAAGCCTAAGTGGATTCTTGATAAGCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| CDS-3UTR TCA 90 bp | CCACATGAATCTCAGCCCTTCACAATATGGCTTATAGGTCTGAAGAAATGGAAATTATCATCGCTTTCTTaGGTTCAAAGGGCTTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: PHESQPFTIWLIGLKKWKLSSLS*VQRASG Trigger: ACCGGAAGCCCTTTGAACTCAAGAAAGCGATGATAA...TTTCCATTTCTTCAGACCTATAAGCCATATTGTGAAGGGCTGAGATTCATGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| CDS-3UTR CCA 90 bp | GTTCTCCGAAGAGGAAAAGGAAATAATATTGACATCTTCACAAGCGTCCAAGTACATCCTCATTGCTCTTaGCGACTGAGAATAGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: VLRRGKGNNIDIFTSVQVHPHCS*RLRIVN Trigger: GTTGACTATTCTCAGTCGCCAAGAGCAATGAGGATG...TACTTGGACGCTTGTGAAGATGTCAATATTATTTCCTTTTCCTCTTCGGAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| CDS-3UTR GCA 90 bp | AGATTTAGAATCACTCACATGGGCAAATCAAAGCAGCTAGATTCCAAAATGAGATGTTCCCAGACCACCTaGAGCAAATTTGACTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: RFRITHMGKSKQLDSKMRCSQTT*SKFDSK Trigger: TTTGGAGTCAAATTTGCTGCAGGTGGTCTGGGAACA...TCTCATTTTGGAATCTAGCTGCTTTGATTTGCCCATGTGAGTGATTCTAAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| CDS-3UTR CCA 90 bp | CAAAATGCACTGCATAGGCAAGTATGTCTTGATTGTCAAGGAAGGCAAGATATCGTATTTAAAAAGGCATaGAATGTTCCCAGACCACCT | + |
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Preference number: 4 (lower is better) Translates to: QNALHRQVCLDCQGRQDIVFKKA*NVPRPP Trigger: AGGTGGTCTGGGAACATTCCATGCCTTTTTAAATAC...GATATCTTGCCTTCCTTGACAATCAAGACATACTTGCCTATGCAGTGCATTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| 3UTR CAA 72 bp | GGAAGGCAAGATATCAGTCTCCATTGTAAATTCAGGTaGTGTCTGTATTTTAGTGGCGCTTGCTTTTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: GRQDISLHCKFR*CLYFSGACFCN Trigger: ATTGCAAAAGCAAGCGCCACTAAAATACAGACACAACCTGAATTTACAATGGAGACTGATATCTTGCCTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225550.2 |
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| CDS-3UTR TCA 90 bp | AGAGTGTTATTATACTGCAACAGATTATACCTTTCCTCATTGAATCCAACAGTCTTATCATCGCTTTCTTaGGTTCAAAGGGCTTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: RVLLYCNRLYLSSLNPTVLSSLS*VQRASG Trigger: ACCGGAAGCCCTTTGAACTCAAGAAAGCGATGATAA...GACTGTTGGATTCAATGAGGAAAGGTATAATCTGTTGCAGTATAATAACACTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| CDS-3UTR CAA 90 bp | CATCTGCGGGGTGATAAGATACAGGCAATTCCAGTGGGCATTTTGAACCACTCTGCCCAGGATGATGGTTaGTGGCAGAGGCGAGGACAT | + |
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Preference number: 5 (lower is better) Translates to: HLRGDKIQAIPVGILNHSAQDDG*WQRRGH Trigger: ATGTCCTCGCCTCTGCCACAAACCATCATCCTGGGC...AGAGTGGTTCAAAATGCCCACTGGAATTGCCTGTATCTTATCACCCCGCAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| CDS CCA 90 bp | CAGAGACGTAACAAAATAGACATAGAGGCCCAGGATGATGGTTTGTaGCAGAGGCGAGGACATGAGGAGATAGTCTTCAACTCTCGGATC | + |
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Preference number: 5 (lower is better) Translates to: QRRNKIDIEAQDDGL*QRRGHEEIVFNSRI Trigger: GATCCGAGAGTTGAAGACTATCTCCTCATGTCCTCGCCTCTGCCACAAACCATCATCCTGGGCCTCTATGTCTATTTTGTTACGTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| CDS CCA 90 bp | CATCGCTTTCTTGAGTTCAAAGGGCTTCCGGTTCTCCATGAGCTTTaGTCCCAGAGACGTAACAAAATAGACATAGAGGCCCAGGATGAT | + |
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Preference number: 5 (lower is better) Translates to: HRFLEFKGLPVLHEL*SQRRNKIDIEAQDD Trigger: ATCATCCTGGGCCTCTATGTCTATTTTGTTACGTCTCTGGGACCAAAGCTCATGGAGAACCGGAAGCCCTTTGAACTCAAGAAAGCGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| CDS-3UTR CAA 90 bp | CAAAAATTAATATGTGATTCAGAAGCACCTGAGGTAAGCCAATCACATGAACACGCCCAGGATGATGGTTaGTGGCAGAGGCGAGGACAT | + |
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Preference number: 5 (lower is better) Translates to: QKLICDSEAPEVSQSHEHAQDDG*WQRRGH Trigger: ATGTCCTCGCCTCTGCCACAAACCATCATCCTGGGC...GTGTTCATGTGATTGGCTTACCTCAGGTGCTTCTGAATCACATATTAATTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| CDS-3UTR CAA 90 bp | AGGGCAGGCAAAACTCATAGTTTATGGTCAATGAGGACTCAGGCTTTATTGCAACCATCCTCATTGCTCTaGGCGACTGAGAATAGTCAA | + |
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Preference number: 5 (lower is better) Translates to: RAGKTHSLWSMRTQALLQPSSLL*ATENSQ Trigger: TTGACTATTCTCAGTCGCCAAGAGCAATGAGGATGG...TTGCAATAAAGCCTGAGTCCTCATTGACCATAAACTATGAGTTTTGCCTGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| CDS-3UTR CAA 90 bp | CAAAATGCACTGCATAGGCAAGTATGTCTTGATTGTCAAGGAAGGCAAGATATCGGTAGGCTGGTCCCATaGCACATAACCCATAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: QNALHRQVCLDCQGRQDIGRLVP*HITHSK Trigger: CTTACTATGGGTTATGTGCAATGGGACCAGCCTACC...GATATCTTGCCTTCCTTGACAATCAAGACATACTTGCCTATGCAGTGCATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| CDS-3UTR CAA 90 bp | AAAGTTCTCCGAAGAGGAAAAGGAAATAATATTGACATCTTCACAAGCGTCCAACCACCTGCAGCAAATTaGACTCCAAACCACCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: KVLRRGKGNNIDIFTSVQPPAAN*TPNHQV Trigger: GACCTGGTGGTTTGGAGTCAAATTTGCTGCAGGTGG...TTGGACGCTTGTGAAGATGTCAATATTATTTCCTTTTCCTCTTCGGAGAACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022207.10 |
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| CDS CAA 90 bp | TCCCAGAGACGTAACAAAATAGACATAGAGGCCCAGGATGATGGTTaGTGGCAGAGGCGAGGACATGAGGAGATAGTCTTCAACTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SQRRNKIDIEAQDDG*WQRRGHEEIVFNSR Trigger: CCGAGAGTTGAAGACTATCTCCTCATGTCCTCGCCTCTGCCACAAACCATCATCCTGGGCCTCTATGTCTATTTTGTTACGTCTCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| CDS CCA 72 bp | CTTGAGTTCAAAGGGCTTCCGGTTCTCCATGAGCTTTaGTCCCAGAGACGTAACAAAATAGACATAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LEFKGLPVLHEL*SQRRNKIDIEA Trigger: GGCCTCTATGTCTATTTTGTTACGTCTCTGGGACCAAAGCTCATGGAGAACCGGAAGCCCTTTGAACTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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| CDS CAA 72 bp | CGTAACAAAATAGACATAGAGGCCCAGGATGATGGTTaGTGGCAGAGGCGAGGACATGAGGAGATAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RNKIDIEAQDDG*WQRRGHEEIVF Trigger: GAAGACTATCTCCTCATGTCCTCGCCTCTGCCACAAACCATCATCCTGGGCCTCTATGTCTATTTTGTTACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022207.10 ENSMUST00000225550.2 |
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