Pregenerated sensors for ELOVL6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041220Ensembl transcript IDs: ENSMUST00000071402.7, ENSMUST00000197070.5, ENSMUST00000197235.5, ENSMUST00000199910.5
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGTTGACAGGCCAGAGGGAAGGGGTCCCCTCAGCAGCCGTGCTTTaGGATAAGAGTTGCACTCAGCGAGTCCTCACCCAGAAAGGATCA | + |
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Preference number: 1 (lower is better) Translates to: ELTGQREGVPSAAVL*DKSCTQRVLTQKGS Trigger: TGATCCTTTCTGGGTGAGGACTCGCTGAGTGCAACTCTTATCTCAAAGCACGGCTGCTGAGGGGACCCCTTCCCTCTGGCCTGTCAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR TCA 90 bp | TCCCGCCCCCGCCTGGCTCCCTTCCCTGGTCGTTCAGTTATGACTTaGTCTACATGGGTCCTTTGTCTACCCTTGATCCCATTCCCACAG | + |
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Preference number: 1 (lower is better) Translates to: SRPRLAPFPGRSVMT*STWVLCLPLIPFPQ Trigger: CTGTGGGAATGGGATCAAGGGTAGACAAAGGACCCATGTAGATCAAGTCATAACTGAACGACCAGGGAAGGGAGCCAGGCGGGGGCGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR TCA 90 bp | ACAGAGTGTGTCACAGGGCCTCATTTAGAAAGCCAGGATTATGTGTaGGGTCGAACAGGGAGGGAGGCGAACACGCTGTCTGCACATTGG | + |
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Preference number: 1 (lower is better) Translates to: TECVTGPHLESQDYV*GRTGREANTLSAHW Trigger: CCAATGTGCAGACAGCGTGTTCGCCTCCCTCCCTGTTCGACCTCACACATAATCCTGGCTTTCTAAATGAGGCCCTGTGACACACTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR GCA 90 bp | ACTCCATTTTCAAGCCAGCCAGCTGAGCTTCTTCCCTTTCAGTTCTaGATTTACTCCTCCGTCCTAAAGTTTGGGGCAACTGAACAACGG | + |
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Preference number: 1 (lower is better) Translates to: TPFSSQPAELLPFQF*IYSSVLKFGATEQR Trigger: CCGTTGTTCAGTTGCCCCAAACTTTAGGACGGAGGAGTAAATGCAGAACTGAAAGGGAAGAAGCTCAGCTGGCTGGCTTGAAAATGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR TCA 90 bp | GGACAACTGGTGAGTGACACAGAAATATCTGGATTTGGCTTTGCTTaGCCTGCAATCAAAGTACAGCTTCCAAGACTTCCCCCAACCAAC | + |
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Preference number: 1 (lower is better) Translates to: GQLVSDTEISGFGFA*PAIKVQLPRLPPTN Trigger: GTTGGTTGGGGGAAGTCTTGGAAGCTGTACTTTGATTGCAGGTCAAGCAAAGCCAAATCCAGATATTTCTGTGTCACTCACCAGTTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR TCA 90 bp | CATTTGTTACACATGGTACAAGACTCCATTTTCAAGCCAGCCAGCTaGGCTTCTTCCCTTTCAGTTCTGCATTTACTCCTCCGTCCTAAA | + |
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Preference number: 1 (lower is better) Translates to: HLLHMVQDSIFKPAS*ASSLSVLHLLLRPK Trigger: TTTAGGACGGAGGAGTAAATGCAGAACTGAAAGGGAAGAAGCTCAGCTGGCTGGCTTGAAAATGGAGTCTTGTACCATGTGTAACAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR GCA 90 bp | AAGATAATCTATTGCAGCATAGTGGGGCAGCTACAAAAACTTGCTTaGCCGGAATGTTCACTGACAGCAGTATTATCTACGTGGCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: KIIYCSIVGQLQKLA*PECSLTAVLSTWQS Trigger: TGACTGCCACGTAGATAATACTGCTGTCAGTGAACATTCCGGGCAAGCAAGTTTTTGTAGCTGCCCCACTATGCTGCAATAGATTATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR CCA 90 bp | AAAGCTCAAAGGAACAAGTACACCCTAAGATTCCACTGGACAGAGTaGCTTCTAGACTTTCATCTCCGGTTAACTTCTACCCCAAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: KAQRNKYTLRFHWTE*LLDFHLRLTSTPSK Trigger: CTTACTTGGGGTAGAAGTTAACCGGAGATGAAAGTCTAGAAGCCACTCTGTCCAGTGGAATCTTAGGGTGTACTTGTTCCTTTGAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR TCA 90 bp | CTGTCTCTCCCATGTTTATCTTTTCTTTTAGCTCTGGTTTCGTGTTaGAAAGATTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: LSLPCLSFLLALVSC*KDCVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACGCAATCTTTTCAACACGAAACCAGAGCTAAAAGAAAAGATAAACATGGGAGAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR GCA 90 bp | GGGATTGGAATGCAGCGAGAAATCTTCAATAGAAAGATAATCTATTaGAGCATAGTGGGGCAGCTACAAAAACTTGCTTGCCCGGAATGT | + |
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Preference number: 1 (lower is better) Translates to: GIGMQREIFNRKIIY*SIVGQLQKLACPEC Trigger: ACATTCCGGGCAAGCAAGTTTTTGTAGCTGCCCCACTATGCTGCAATAGATTATCTTTCTATTGAAGATTTCTCGCTGCATTCCAATCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR CCA 90 bp | TGCATTTACAAAGCTCAAAGGAACAAGTACACCCTAAGATTCCACTaGACAGAGTGGCTTCTAGACTTTCATCTCCGGTTAACTTCTACC | + |
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Preference number: 1 (lower is better) Translates to: CIYKAQRNKYTLRFH*TEWLLDFHLRLTST Trigger: GGTAGAAGTTAACCGGAGATGAAAGTCTAGAAGCCACTCTGTCCAGTGGAATCTTAGGGTGTACTTGTTCCTTTGAGCTTTGTAAATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR TCA 90 bp | CCAGTGGTCCAGCCTCGTATCTTGATACAATTAGAGCAGCTAAGCTaGTATGTTAAAAACTGTGTGCTGAGCCTATATCAGAATTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: PVVQPRILIQLEQLS*YVKNCVLSLYQNSV Trigger: CACAGAATTCTGATATAGGCTCAGCACACAGTTTTTAACATATCAGCTTAGCTGCTCTAATTGTATCAAGATACGAGGCTGGACCACTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR CCA 90 bp | CAAAACAAAGACTGGAAAAGGATGCATTTGAAGGCTAGAAAGTTCTaGGCTGTCATCATGATCTCCTCACAACTGTCTCTAGCATTGACA | + |
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Preference number: 1 (lower is better) Translates to: QNKDWKRMHLKARKF*AVIMISSQLSLALT Trigger: TGTCAATGCTAGAGACAGTTGTGAGGAGATCATGATGACAGCCCAGAACTTTCTAGCCTTCAAATGCATCCTTTTCCAGTCTTTGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR TCA 90 bp | CTTGACTATAATACAATTGTTTTGTGGGTGGACATGGACAACTGGTaGGTGACACAGAAATATCTGGATTTGGCTTTGCTTGACCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: LDYNTIVLWVDMDNW*VTQKYLDLALLDLQ Trigger: TTGCAGGTCAAGCAAAGCCAAATCCAGATATTTCTGTGTCACTCACCAGTTGTCCATGTCCACCCACAAAACAATTGTATTATAGTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR TCA 90 bp | AACCAGGAGAACAAAAGTCTGAAGTGCCACCAAGCATTGGGGAAATaGTATTGTTTAGATGCTAGTGAGTCAGGTTCTTTCAAATGTGTC | + |
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Preference number: 1 (lower is better) Translates to: NQENKSLKCHQALGK*YCLDASESGSFKCV Trigger: GACACATTTGAAAGAACCTGACTCACTAGCATCTAAACAATATCATTTCCCCAATGCTTGGTGGCACTTCAGACTTTTGTTCTCCTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR TCA 90 bp | ATAGGACGTCCTTGTTTTATTAGATGTCACTTCAATATGCAGAGGTaGCATATATGTTGTGAATTCTCACCCAAATCACTTTCTGATGGC | + |
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Preference number: 1 (lower is better) Translates to: IGRPCFIRCHFNMQR*HICCEFSPKSLSDG Trigger: GCCATCAGAAAGTGATTTGGGTGAGAATTCACAACATATATGTCACCTCTGCATATTGAAGTGACATCTAATAAAACAAGGACGTCCTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR CCA 90 bp | AAGTGGAGAGAGCATGAAGCGAAGAACACTGAGACTAAAGTGCTTTaGAAGCATAGCTTAGTCGTTTTAAAGTTTATGCTTATGAGATTT | + |
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Preference number: 1 (lower is better) Translates to: KWREHEAKNTETKVL*KHSLVVLKFMLMRF Trigger: AAATCTCATAAGCATAAACTTTAAAACGACTAAGCTATGCTTCCAAAGCACTTTAGTCTCAGTGTTCTTCGCTTCATGCTCTCTCCACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR CAA 90 bp | CTCCCGCCCCCGCCTGGCTCCCTTCCCTGGTCGTTCAGTTATGACTaGATCTACATGGGTCCTTTGTCTACCCTTGATCCCATTCCCACA | + |
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Preference number: 2 (lower is better) Translates to: LPPPPGSLPWSFSYD*IYMGPLSTLDPIPT Trigger: TGTGGGAATGGGATCAAGGGTAGACAAAGGACCCATGTAGATCAAGTCATAACTGAACGACCAGGGAAGGGAGCCAGGCGGGGGCGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR-3UTR TCA 90 bp | CAAAGTACAGCTTCCAAGACTTCCCCCAACCAACCACCTAGGCGCTGCACCCACCGAACATACAAGCCCTaGGGCTGTGCAGAAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: QSTASKTSPNQPPRRCTHRTYKP*GCAEGE Trigger: TTCCCCTTCTGCACAGCCTCAGGGCTTGTATGTTCG...GTGGGTGCAGCGCCTAGGTGGTTGGTTGGGGGAAGTCTTGGAAGCTGTACTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR-3UTR CCA 90 bp | GCCAGCAGAGGGCACTTCTCAAGCCTCTGCACTGCTGAAGGGAGCAAATGCAGAAGCACAGTGATGTGGTaGTACCAGTGCAGGAAGATC | + |
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Preference number: 2 (lower is better) Translates to: ASRGHFSSLCTAEGSKCRSTVMW*YQCRKI Trigger: GATCTTCCTGCACTGGTACCACCACATCACTGTGCT...TCTGCATTTGCTCCCTTCAGCAGTGCAGAGGCTTGAGAAGTGCCCTCTGCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197070.5 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTACAGCTTCCAAGACTTCCCCCAACCAACCACCTAGGCGCTGCACCCACTCAGGCACCAGGAAATaGGAGCTGTGTGATCATAAG | + |
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Preference number: 2 (lower is better) Translates to: QSTASKTSPNQPPRRCTHSGTRK*ELCDHK Trigger: CTTATGATCACACAGCTCCCATTTCCTGGTGCCTGA...GTGGGTGCAGCGCCTAGGTGGTTGGTTGGGGGAAGTCTTGGAAGCTGTACTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR-3UTR CCA 90 bp | GCCTCATTTAGAAAGCCAGGATTATGTGTGAGGTCGAACAGGGAGGGAGGCGAACAGCTCCAGGGACGATaGGCTGGCATTTGTTACACA | + |
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Preference number: 2 (lower is better) Translates to: ASFRKPGLCVRSNREGGEQLQGR*AGICYT Trigger: TGTGTAACAAATGCCAGCCCATCGTCCCTGGAGCTG...TTCGCCTCCCTCCCTGTTCGACCTCACACATAATCCTGGCTTTCTAAATGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR-3UTR GCA 90 bp | GGTACAAGACTCCATTTTCAAGCCAGCCAGCTGAGCTTCTTCCCTTTCAGTTCTCAAGCCCTGAGGCTGTaGAGAAGGGGAAAGGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: GTRLHFQASQLSFFPFSSQALRL*RRGKAL Trigger: TAGAGCCTTTCCCCTTCTGCACAGCCTCAGGGCTTG...AGAACTGAAAGGGAAGAAGCTCAGCTGGCTGGCTTGAAAATGGAGTCTTGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR-3UTR GCA 90 bp | AACATACAAGCCCTGAGGCTGTGCAGAAGGGGAAAGGCTCTACCTCTTTACTTTCAAGCCCTGAGGCTGTaGAGAAGGGGAAAGGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: NIQALRLCRRGKALPLYFQALRL*RRGKAL Trigger: TAGAGCCTTTCCCCTTCTGCACAGCCTCAGGGCTTG...AAAGTAAAGAGGTAGAGCCTTTCCCCTTCTGCACAGCCTCAGGGCTTGTATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTCACAGGGCCTCATTTAGAAAGCCAGGATTATGTGTGAGGTCGAACAGGCCTGCAGTGTTTTGCTaGCCGTCCACTAATCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: VCHRASFRKPGLCVRSNRPAVFC*PSTNLC Trigger: GCAGAGATTAGTGGACGGCCAGCAAAACACTGCAGG...CCTGTTCGACCTCACACATAATCCTGGCTTTCTAAATGAGGCCCTGTGACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR-3UTR GCA 90 bp | GCCCTGAGGCTGTGCAGAAGGGGAAAGGCTCTACCTCTTTACTTTCAGTTGCAGATGTGGTGGTACCAGTaGAGGAAGATCAGTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: ALRLCRRGKALPLYFQLQMWWYQ*RKISFC Trigger: ACAGAAACTGATCTTCCTGCACTGGTACCACCACAT...CTGCAACTGAAAGTAAAGAGGTAGAGCCTTTCCCCTTCTGCACAGCCTCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197070.5 |
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| 3UTR-3UTR TCA 90 bp | GGTACAAGACTCCATTTTCAAGCCAGCCAGCTGAGCTTCTTCCCTTTCAGTTCTCGTAGTAAGAGTACATaGCGGCATGCACGCCATAGT | + |
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Preference number: 2 (lower is better) Translates to: GTRLHFQASQLSFFPFSSRSKST*RHARHS Trigger: ACTATGGCGTGCATGCCGTCATGTACTCTTACTACG...AGAACTGAAAGGGAAGAAGCTCAGCTGGCTGGCTTGAAAATGGAGTCTTGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197070.5 |
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| 3UTR-3UTR GCA 90 bp | CCTCACCCAGAAAGGATCATAAACTTACAACCTAATCTTCAGTCCCAAGCTGCCTCTGCCCAATCTCTTTaGCCGTGGCTGCCTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: PHPERIINLQPNLQSQAASAQSL*PWLPLH Trigger: ATGCAAAGGCAGCCACGGGCAAAGAGATTGGGCAGA...GGCAGCTTGGGACTGAAGATTAGGTTGTAAGTTTATGATCCTTTCTGGGTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR-3UTR CCA 90 bp | AACATACAAGCCCTGAGGCTGTGCAGAAGGGGAAAGGCTCTACCTCTTTACTTTCAATCTCTTTGCCCGTaGCTGCCTTTGCATCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: NIQALRLCRRGKALPLYFQSLCP*LPLHLV Trigger: CACTAGATGCAAAGGCAGCCACGGGCAAAGAGATTG...AAAGTAAAGAGGTAGAGCCTTTCCCCTTCTGCACAGCCTCAGGGCTTGTATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR-3UTR CCA 90 bp | GCCTTTTGCAAAAGCATTGCTGTCCCAGATAGAAACCCTGTCTCTCCCATGTTTCCTGCAGTGTTTTGCTaGCCGTCCACTAATCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: AFCKSIAVPDRNPVSPMFPAVFC*PSTNLC Trigger: GCAGAGATTAGTGGACGGCCAGCAAAACACTGCAGG...AAACATGGGAGAGACAGGGTTTCTATCTGGGACAGCAATGCTTTTGCAAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR-3UTR CCA 90 bp | CCATTTTCAAGCCAGCCAGCTGAGCTTCTTCCCTTTCAGTTCTGCATTTACTCCCCAGGGACGATGGGCTaGCATTTGTTACACATGGTA | + |
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Preference number: 2 (lower is better) Translates to: PFSSQPAELLPFQFCIYSPGTMG*HLLHMV Trigger: TACCATGTGTAACAAATGCCAGCCCATCGTCCCTGG...GGAGTAAATGCAGAACTGAAAGGGAAGAAGCTCAGCTGGCTGGCTTGAAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTCACAGGGCCTCATTTAGAAAGCCAGGATTATGTGTGAGGTCGAACAGGACTACTCAGCCTTCGTaGCTTTCTTCACTTTGCCGA | + |
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Preference number: 2 (lower is better) Translates to: VCHRASFRKPGLCVRSNRTTQPS*LSSLCR Trigger: TCGGCAAAGTGAAGAAAGCCACGAAGGCTGAGTAGT...CCTGTTCGACCTCACACATAATCCTGGCTTTCTAAATGAGGCCCTGTGACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197070.5 |
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| 3UTR-3UTR TCA 90 bp | GCCTCATTTAGAAAGCCAGGATTATGTGTGAGGTCGAACAGGGAGGGAGGCGAATGTGCTCACATCGTTTaGAAAGGGGAAACTCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: ASFRKPGLCVRSNREGGECAHIV*KGETPL Trigger: TAAAGGAGTTTCCCCTTTTCAAACGATGTGAGCACA...TTCGCCTCCCTCCCTGTTCGACCTCACACATAATCCTGGCTTTCTAAATGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR-3UTR TCA 90 bp | GGGTTTCTTTCTCCCAGTAATAAAGTATCATGGGGGAAGTACTGTCCTGTGTTTCGAACATACAAGCCCTaGGGCTGTGCAGAAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: GFLSPSNKVSWGKYCPVFRTYKP*GCAEGE Trigger: TTCCCCTTCTGCACAGCCTCAGGGCTTGTATGTTCG...AAACACAGGACAGTACTTCCCCCATGATACTTTATTACTGGGAGAAAGAAACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR-3UTR TCA 90 bp | GCCTTTTGCAAAAGCATTGCTGTCCCAGATAGAAACCCTGTCTCTCCCATGTTTTTCAAGCCAGCCAGCTaGGCTTCTTCCCTTTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: AFCKSIAVPDRNPVSPMFFKPAS*ASSLSV Trigger: AACTGAAAGGGAAGAAGCTCAGCTGGCTGGCTTGAA...AAACATGGGAGAGACAGGGTTTCTATCTGGGACAGCAATGCTTTTGCAAAAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR CAA 90 bp | AAAGATAATCTATTGCAGCATAGTGGGGCAGCTACAAAAACTTGCTaGCCCGGAATGTTCACTGACAGCAGTATTATCTACGTGGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: KDNLLQHSGAATKTC*PGMFTDSSIIYVAV Trigger: GACTGCCACGTAGATAATACTGCTGTCAGTGAACATTCCGGGCAAGCAAGTTTTTGTAGCTGCCCCACTATGCTGCAATAGATTATCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTCACAGGGCCTCATTTAGAAAGCCAGGATTATGTGTGAGGTCGAACAGGTTGTTTTGTTTTAGCTaGACCATATGGGATTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: VCHRASFRKPGLCVRSNRLFCFS*TIWDSL Trigger: CAAGGAATCCCATATGGTGCAGCTAAAACAAAACAA...CCTGTTCGACCTCACACATAATCCTGGCTTTCTAAATGAGGCCCTGTGACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR-3UTR GCA 90 bp | GAAAGTCACAAAAATATAGAAAGCACAGAGTGTGTCACAGGGCCTCATTTAGAATCTGCCCAATCTCTTTaGCCGTGGCTGCCTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: ESHKNIESTECVTGPHLESAQSL*PWLPLH Trigger: ATGCAAAGGCAGCCACGGGCAAAGAGATTGGGCAGA...TTCTAAATGAGGCCCTGTGACACACTCTGTGCTTTCTATATTTTTGTGACTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR-3UTR CCA 90 bp | GAAAGTCACAAAAATATAGAAAGCACAGAGTGTGTCACAGGGCCTCATTTAGAACCTGCAGTGTTTTGCTaGCCGTCCACTAATCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: ESHKNIESTECVTGPHLEPAVFC*PSTNLC Trigger: GCAGAGATTAGTGGACGGCCAGCAAAACACTGCAGG...TTCTAAATGAGGCCCTGTGACACACTCTGTGCTTTCTATATTTTTGTGACTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR-3UTR TCA 90 bp | AACAACGGATGCTTGAATTCTCGTCGGAGAGCAGAAATAACAGTTGTCAGTGTGTGTGCTCACATCGTTTaGAAAGGGGAAACTCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: NNGCLNSRRRAEITVVSVCAHIV*KGETPL Trigger: TAAAGGAGTTTCCCCTTTTCAAACGATGTGAGCACA...CACACTGACAACTGTTATTTCTGCTCTCCGACGAGAATTCAAGCATCCGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGATTTGTGTTCATTCAATCCAGGAATTAAGTTTTCACCACACTGGGATTCAATCTCTTTGCCCGTaGCTGCCTTTGCATCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: PWICVHSIQELSFHHTGIQSLCP*LPLHLV Trigger: CACTAGATGCAAAGGCAGCCACGGGCAAAGAGATTG...AATCCCAGTGTGGTGAAAACTTAATTCCTGGATTGAATGAACACAAATCCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR CAA 90 bp | TGCTCAGACCTAGTGACCGCACTGCGTTTATATGAAACCTTGGATTaGTGTTCATTCAATCCAGGAATTAAGTTTTCACCACACTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: CSDLVTALRLYETLD*CSFNPGIKFSPHWD Trigger: ATCCCAGTGTGGTGAAAACTTAATTCCTGGATTGAATGAACACAAATCCAAGGTTTCATATAAACGCAGTGCGGTCACTAGGTCTGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR-3UTR CCA 90 bp | GATAGTTGTTGTTTCTCCTCACAGTTGACACTAGAAGGTCCAGATAAAAATCTCGCAGTATTATCTACGTaGCAGTCAATTCTGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: DSCCFSSQLTLEGPDKNLAVLST*QSILAG Trigger: ACCTGCCAGAATTGACTGCCACGTAGATAATACTGC...GAGATTTTTATCTGGACCTTCTAGTGTCAACTGTGAGGAGAAACAACAACTATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
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| 3UTR-3UTR TCA 90 bp | ATATGCAGAGGTGACATATATGTTGTGAATTCTCACCCAAATCACTTTCTGATGTTTCCCCTCCAGTCTTaGCTTTCTATAGTGCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ICRGDIYVVNSHPNHFLMFPLQS*LSIVQK Trigger: CTTCTGCACTATAGAAAGTCAAGACTGGAGGGGAAA...CATCAGAAAGTGATTTGGGTGAGAATTCACAACATATATGTCACCTCTGCATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR-3UTR CCA 90 bp | AAAAATATAGAAAGCACAGAGTGTGTCACAGGGCCTCATTTAGAAAGCCAGGATAGTAATAAAGTATCATaGGGGAAGTACTGTCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: KNIESTECVTGPHLESQDSNKVS*GKYCPV Trigger: CACAGGACAGTACTTCCCCCATGATACTTTATTACT...ATCCTGGCTTTCTAAATGAGGCCCTGTGACACACTCTGTGCTTTCTATATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR-3UTR CCA 90 bp | TTGAATTCTCGTCGGAGAGCAGAAATAACAGTTGTCAGTGTGGTGTTTCAACTAAGTAATAAAGTATCATaGGGGAAGTACTGTCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LNSRRRAEITVVSVVFQLSNKVS*GKYCPV Trigger: CACAGGACAGTACTTCCCCCATGATACTTTATTACT...TAGTTGAAACACCACACTGACAACTGTTATTTCTGCTCTCCGACGAGAATTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR-3UTR GCA 90 bp | AAAAATATAGAAAGCACAGAGTGTGTCACAGGGCCTCATTTAGAAAGCCAGGATTTGTTTTGTTTTAGCTaGACCATATGGGATTCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: KNIESTECVTGPHLESQDLFCFS*TIWDSL Trigger: CAAGGAATCCCATATGGTGCAGCTAAAACAAAACAA...ATCCTGGCTTTCTAAATGAGGCCCTGTGACACACTCTGTGCTTTCTATATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR-3UTR GCA 90 bp | CCTTGGATTTGTGTTCATTCAATCCAGGAATTAAGTTTTCACCACACTGGGATTTTGTTTTGTTTTAGCTaGACCATATGGGATTCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: PWICVHSIQELSFHHTGILFCFS*TIWDSL Trigger: CAAGGAATCCCATATGGTGCAGCTAAAACAAAACAA...AATCCCAGTGTGGTGAAAACTTAATTCCTGGATTGAATGAACACAAATCCAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGTCACAAAAATATAGAAAGCACAGAGTGTGTCACAGGGCCTCATTTAGAACTCTCTCTTCTGATTTaGTCAAATATATGTCAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ESHKNIESTECVTGPHLELSLLI*SNICQV Trigger: CACCTGACATATATTTGACCAAATCAGAAGAGAGAG...TTCTAAATGAGGCCCTGTGACACACTCTGTGCTTTCTATATTTTTGTGACTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR TCA 72 bp | GGCCAGAGGGAAGGGGTCCCCTCAGCAGCCGTGCTTTaGGATAAGAGTTGCACTCAGCGAGTCCTCACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GQREGVPSAAVL*DKSCTQRVLTQ Trigger: CTGGGTGAGGACTCGCTGAGTGCAACTCTTATCTCAAAGCACGGCTGCTGAGGGGACCCCTTCCCTCTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTGAGGCTGTGCAGAAGGGGAAAGGCTCTACCTCTTTACTTTCAGTTGCAGCTCTGCCCAATCTCTTaGCCCGTGGCTGCCTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ALRLCRRGKALPLYFQLQLCPIS*PVAAFA Trigger: TGCAAAGGCAGCCACGGGCAAAGAGATTGGGCAGAG...CTGCAACTGAAAGTAAAGAGGTAGAGCCTTTCCCCTTCTGCACAGCCTCAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR TCA 72 bp | GTCACAGGGCCTCATTTAGAAAGCCAGGATTATGTGTaGGGTCGAACAGGGAGGGAGGCGAACACGCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VTGPHLESQDYV*GRTGREANTLS Trigger: AGACAGCGTGTTCGCCTCCCTCCCTGTTCGACCTCACACATAATCCTGGCTTTCTAAATGAGGCCCTGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR GCA 72 bp | GCTTCCAAGACTTCCCCCAACCAACCACCTAGGCGCTaGACCCACCAGTACAACTCTAGGAAATGTTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ASKTSPNQPPRR*THQYNSRKCLW Trigger: CCACAAACATTTCCTAGAGTTGTACTGGTGGGTGCAGCGCCTAGGTGGTTGGTTGGGGGAAGTCTTGGAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGCAGAGGGCACTTCTCAAGCCTCTGCACTGCTGAAGGGAGCAAATGCAGAACGATGGGCTGGCATTaGTTACACATGGTACAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ASRGHFSSLCTAEGSKCRTMGWH*LHMVQD Trigger: GTCTTGTACCATGTGTAACAAATGCCAGCCCATCGT...TCTGCATTTGCTCCCTTCAGCAGTGCAGAGGCTTGAGAAGTGCCCTCTGCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR CCA 72 bp | GGCCGTCCACTAATCTCTGCCCAATCTCTTTGCCCGTaGCTGCCTTTGCATCTAGTGTGTTCTAGAGTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GRPLISAQSLCP*LPLHLVCSRVD Trigger: GTCAACTCTAGAACACACTAGATGCAAAGGCAGCCACGGGCAAAGAGATTGGGCAGAGATTAGTGGACGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR CCA 72 bp | CAGCTCCAGGGACGATGGGCTGGCATTTGTTACACATaGTACAAGACTCCATTTTCAAGCCAGCCAGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QLQGRWAGICYT*YKTPFSSQPAE Trigger: CTCAGCTGGCTGGCTTGAAAATGGAGTCTTGTACCATGTGTAACAAATGCCAGCCCATCGTCCCTGGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR CCA 72 bp | GCCCTTCCTCCCTGTTCAGCTCCAGGGACGATGGGCTaGCATTTGTTACACATGGTACAAGACTCCATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ALPPCSAPGTMG*HLLHMVQDSIF Trigger: GAAAATGGAGTCTTGTACCATGTGTAACAAATGCCAGCCCATCGTCCCTGGAGCTGAACAGGGAGGAAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGTACAGCTTCCAAGACTTCCCCCAACCAACCACCTAGGCGCTGCACCCACCCTTTTGCAAAAGCATaGCTGTCCCAGATAGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: QSTASKTSPNQPPRRCTHPFAKA*LSQIET Trigger: GGTTTCTATCTGGGACAGCAATGCTTTTGCAAAAGG...GTGGGTGCAGCGCCTAGGTGGTTGGTTGGGGGAAGTCTTGGAAGCTGTACTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTTTGCAAAAGCATTGCTGTCCCAGATAGAAACCCTGTCTCTCCCATGTTTCTCTGCCCAATCTCTTaGCCCGTGGCTGCCTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: AFCKSIAVPDRNPVSPMFLCPIS*PVAAFA Trigger: TGCAAAGGCAGCCACGGGCAAAGAGATTGGGCAGAG...AAACATGGGAGAGACAGGGTTTCTATCTGGGACAGCAATGCTTTTGCAAAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR TCA 72 bp | TTACCTATGCCCGGAGGTTGTAGAGTGTGCCAGGGCTaGCTTGGTGTCTGTATCTGGCAGTTCTTGAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LPMPGGCRVCQG*LGVCIWQFLSK Trigger: TTTGCTCAAGAACTGCCAGATACAGACACCAAGTCAGCCCTGGCACACTCTACAACCTCCGGGCATAGGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR GCA 72 bp | TTTGCTGGCCGTCCACTAATCTCTGCCCAATCTCTTTaGCCGTGGCTGCCTTTGCATCTAGTGTGTTCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: FAGRPLISAQSL*PWLPLHLVCSR Trigger: TCTAGAACACACTAGATGCAAAGGCAGCCACGGGCAAAGAGATTGGGCAGAGATTAGTGGACGGCCAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR CCA 72 bp | CGCTGCACCCACCAGTACAACTCTAGGAAATGTTTGTaGGAAGATGGAAGCGTGGGTATCCATGCTCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RCTHQYNSRKCL*EDGSVGIHALR Trigger: TCTCAGAGCATGGATACCCACGCTTCCATCTTCCCACAAACATTTCCTAGAGTTGTACTGGTGGGTGCAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR-3UTR CAA 90 bp | GCCCAATCTCTTTGCCCGTGGCTGCCTTTGCATCTAGTGTGTTCTAGAGTTGACACCATATGGGATTCCTaGTGCCATTTTTCTTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: AQSLCPWLPLHLVCSRVDTIWDS*CHFSFV Trigger: GACAAAAGAAAAATGGCACAAGGAATCCCATATGGT...GTCAACTCTAGAACACACTAGATGCAAAGGCAGCCACGGGCAAAGAGATTGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR-3UTR CAA 90 bp | CCATTTTCAAGCCAGCCAGCTGAGCTTCTTCCCTTTCAGTTCTGCATTTACTCCCCTTTTGCAAAAGCATaGCTGTCCCAGATAGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: PFSSQPAELLPFQFCIYSPFAKA*LSQIET Trigger: GGTTTCTATCTGGGACAGCAATGCTTTTGCAAAAGG...GGAGTAAATGCAGAACTGAAAGGGAAGAAGCTCAGCTGGCTGGCTTGAAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR TCA 72 bp | GGCAGCTACAAAAACTTGCTTGCCCGGAATGTTCACTaGCAGCAGTATTATCTACGTGGCAGTCAATTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GSYKNLLARNVH*QQYYLRGSQFW Trigger: CCAGAATTGACTGCCACGTAGATAATACTGCTGTCAGTGAACATTCCGGGCAAGCAAGTTTTTGTAGCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR GCA 72 bp | TTTCCAAGTAGCAGTGAGCTAAGCCCAGCCCGGTCATaGTCAGACCCACACTTAACTGAAATATTCACACTA | + |
|
Preference number: 3 (lower is better) Translates to: FPSSSELSPARS*SDPHLTEIFTL Trigger: TAGTGTGAATATTTCAGTTAAGTGTGGGTCTGAGCATGACCGGGCTGGGCTTAGCTCACTGCTACTTGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR CCA 72 bp | GATTTGAGCTTTATAGCTCCGTGTACCTCACGTACGTaGCTATGTGTGTATAATCTACGTGGTGTAGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: DLSFIAPCTSRT*LCVYNLRGVAA Trigger: GGCTGCTACACCACGTAGATTATACACACATAGCCACGTACGTGAGGTACACGGAGCTATAAAGCTCAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGCATAGAGGTTCTCTCTCTCTTCTGATTTGGTCAAATATATGTCAGGTGTTTCTCTGCCCAATCTCTTaGCCCGTGGCTGCCTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: KHRGSLSLLIWSNICQVFLCPIS*PVAAFA Trigger: TGCAAAGGCAGCCACGGGCAAAGAGATTGGGCAGAG...AAACACCTGACATATATTTGACCAAATCAGAAGAGAGAGAGAACCTCTATGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR GCA 72 bp | TATTGCAGCATAGTGGGGCAGCTACAAAAACTTGCTTaGCCGGAATGTTCACTGACAGCAGTATTATCTACG | + |
|
Preference number: 3 (lower is better) Translates to: YCSIVGQLQKLA*PECSLTAVLST Trigger: CGTAGATAATACTGCTGTCAGTGAACATTCCGGGCAAGCAAGTTTTTGTAGCTGCCCCACTATGCTGCAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR GCA 72 bp | GAAATGTTTGTGGGAAGATGGAAGCGTGGGTATCCATaGTCTGAGAATCCTAGTTTTCAAAGCATCTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: EMFVGRWKRGYP*SENPSFQSIWG Trigger: TCCCCAGATGCTTTGAAAACTAGGATTCTCAGAGCATGGATACCCACGCTTCCATCTTCCCACAAACATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTCTGCATTTACTCCTCCGTCCTAAAGTTTGGGGCAACTGAACAACGGATGACCATATGGGATTCCTaGTGCCATTTTTCTTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: QFCIYSSVLKFGATEQRMTIWDS*CHFSFV Trigger: GACAAAAGAAAAATGGCACAAGGAATCCCATATGGT...CATCCGTTGTTCAGTTGCCCCAAACTTTAGGACGGAGGAGTAAATGCAGAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR-3UTR CAA 90 bp | AACATACAAGCCCTGAGGCTGTGCAGAAGGGGAAAGGCTCTACCTCTTTACTTTACCATATGGGATTCCTaGTGCCATTTTTCTTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: NIQALRLCRRGKALPLYFTIWDS*CHFSFV Trigger: GACAAAAGAAAAATGGCACAAGGAATCCCATATGGT...AAAGTAAAGAGGTAGAGCCTTTCCCCTTCTGCACAGCCTCAGGGCTTGTATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTTTGCAAAAGCATTGCTGTCCCAGATAGAAACCCTGTCTCTCCCATGTTTGCTCATACGGATGTTTaGTTTTGTTTTAGCTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: AFCKSIAVPDRNPVSPMFAHTDV*FCFSCT Trigger: GGTGCAGCTAAAACAAAACAAAACATCCGTATGAGC...AAACATGGGAGAGACAGGGTTTCTATCTGGGACAGCAATGCTTTTGCAAAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR TCA 72 bp | GTGAGTGACACAGAAATATCTGGATTTGGCTTTGCTTaGCCTGCAATCAAAGTACAGCTTCCAAGACTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VSDTEISGFGFA*PAIKVQLPRLP Trigger: GGGAAGTCTTGGAAGCTGTACTTTGATTGCAGGTCAAGCAAAGCCAAATCCAGATATTTCTGTGTCACTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR TCA 72 bp | CAATTGTTTTGTGGGTGGACATGGACAACTGGTGAGTaGCACAGAAATATCTGGATTTGGCTTTGCTTGACC | + |
|
Preference number: 3 (lower is better) Translates to: QLFCGWTWTTGE*HRNIWIWLCLT Trigger: GGTCAAGCAAAGCCAAATCCAGATATTTCTGTGTCACTCACCAGTTGTCCATGTCCACCCACAAAACAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR GCA 72 bp | AATCTATTGCAGCATAGTGGGGCAGCTACAAAAACTTaGTTGCCCGGAATGTTCACTGACAGCAGTATTATC | + |
|
Preference number: 3 (lower is better) Translates to: NLLQHSGAATKT*LPGMFTDSSII Trigger: GATAATACTGCTGTCAGTGAACATTCCGGGCAAGCAAGTTTTTGTAGCTGCCCCACTATGCTGCAATAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR CCA 72 bp | CTACAGGGGTTTCTTTCTCCCAGTAATAAAGTATCATaGGGGAAGTACTGTCCTGTGTTTGGTTGTAGCGAA | + |
|
Preference number: 3 (lower is better) Translates to: LQGFLSPSNKVS*GKYCPVFGCSE Trigger: TTCGCTACAACCAAACACAGGACAGTACTTCCCCCATGATACTTTATTACTGGGAGAAAGAAACCCCTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR CCA 72 bp | GTTTTCTATGATACTTGGAGCAGGTGGACTTTTAACTaGCCCTTTCATCTGTGGTTCCTGCTTTATGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VFYDTWSRWTFN*PFHLWFLLYGS Trigger: TGAGCCATAAAGCAGGAACCACAGATGAAAGGGCCAGTTAAAAGTCCACCTGCTCCAAGTATCATAGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTTCTTTCTCCCAGTAATAAAGTATCATGGGGGAAGTACTGTCCTGTGTTTGTGTGCTCACATCGTTaGAAAAGGGGAAACTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GFLSPSNKVSWGKYCPVFVCSHR*KRGNSF Trigger: AAAGGAGTTTCCCCTTTTCAAACGATGTGAGCACAC...AAACACAGGACAGTACTTCCCCCATGATACTTTATTACTGGGAGAAAGAAACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR-3UTR CAA 90 bp | AAAAATATAGAAAGCACAGAGTGTGTCACAGGGCCTCATTTAGAAAGCCAGGATACGATGGGCTGGCATTaGTTACACATGGTACAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: KNIESTECVTGPHLESQDTMGWH*LHMVQD Trigger: GTCTTGTACCATGTGTAACAAATGCCAGCCCATCGT...ATCCTGGCTTTCTAAATGAGGCCCTGTGACACACTCTGTGCTTTCTATATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR TCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGCTCACATCGTTTaGAAAGGGGAAACTCCTTTATCCTTAGAGAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCVCAHIV*KGETPLSLEKN Trigger: GTTTTTCTCTAAGGATAAAGGAGTTTCCCCTTTTCAAACGATGTGAGCACACACACACACACACACACACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR TCA 72 bp | ATGTTTCTTCTAAGCACAGTCTGTCACAACAGGCACTaGGAATTCTTGTACAGGCACCGACATCTGTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: MFLLSTVCHNRH*EFLYRHRHLFC Trigger: ACAAAACAGATGTCGGTGCCTGTACAAGAATTCTCAGTGCCTGTTGTGACAGACTGTGCTTAGAAGAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR CCA 72 bp | TATCCATGCTCTGAGAATCCTAGTTTTCAAAGCATCTaGGGATGGGGACAATACCAGATTATACAACAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: YPCSENPSFQSI*GWGQYQIIQQA Trigger: AGCCTGTTGTATAATCTGGTATTGTCCCCATCCCCAGATGCTTTGAAAACTAGGATTCTCAGAGCATGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR-3UTR CAA 90 bp | TTGAATTCTCGTCGGAGAGCAGAAATAACAGTTGTCAGTGTGGTGTTTCAACTAGTGTGCTCACATCGTTaGAAAAGGGGAAACTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LNSRRRAEITVVSVVFQLVCSHR*KRGNSF Trigger: AAAGGAGTTTCCCCTTTTCAAACGATGTGAGCACAC...TAGTTGAAACACCACACTGACAACTGTTATTTCTGCTCTCCGACGAGAATTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR-3UTR CAA 90 bp | AAAAATATAGAAAGCACAGAGTGTGTCACAGGGCCTCATTTAGAAAGCCAGGATGTGTGCTCACATCGTTaGAAAAGGGGAAACTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: KNIESTECVTGPHLESQDVCSHR*KRGNSF Trigger: AAAGGAGTTTCCCCTTTTCAAACGATGTGAGCACAC...ATCCTGGCTTTCTAAATGAGGCCCTGTGACACACTCTGTGCTTTCTATATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTTGGATTTGTGTTCATTCAATCCAGGAATTAAGTTTTCACCACACTGGGATTACGATGGGCTGGCATTaGTTACACATGGTACAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PWICVHSIQELSFHHTGITMGWH*LHMVQD Trigger: GTCTTGTACCATGTGTAACAAATGCCAGCCCATCGT...AATCCCAGTGTGGTGAAAACTTAATTCCTGGATTGAATGAACACAAATCCAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR TCA 72 bp | TTGATGCTCAGACCTAGTGACCGCACTGCGTTTATATaGAACCTTGGATTTGTGTTCATTCAATCCAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LMLRPSDRTAFI*NLGFVFIQSRN Trigger: ATTCCTGGATTGAATGAACACAAATCCAAGGTTTCATATAAACGCAGTGCGGTCACTAGGTCTGAGCATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR TCA 72 bp | CAGCCTCGTATCTTGATACAATTAGAGCAGCTAAGCTaGTATGTTAAAAACTGTGTGCTGAGCCTATATCAG | + |
|
Preference number: 3 (lower is better) Translates to: QPRILIQLEQLS*YVKNCVLSLYQ Trigger: CTGATATAGGCTCAGCACACAGTTTTTAACATATCAGCTTAGCTGCTCTAATTGTATCAAGATACGAGGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR TCA 72 bp | AATACAATTGTTTTGTGGGTGGACATGGACAACTGGTaGGTGACACAGAAATATCTGGATTTGGCTTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: NTIVLWVDMDNW*VTQKYLDLALL Trigger: AAGCAAAGCCAAATCCAGATATTTCTGTGTCACTCACCAGTTGTCCATGTCCACCCACAAAACAATTGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR TCA 72 bp | AACAAAAGTCTGAAGTGCCACCAAGCATTGGGGAAATaGTATTGTTTAGATGCTAGTGAGTCAGGTTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: NKSLKCHQALGK*YCLDASESGSF Trigger: GAAAGAACCTGACTCACTAGCATCTAAACAATATCATTTCCCCAATGCTTGGTGGCACTTCAGACTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR TCA 72 bp | GAAAATAAGAATTCCAACACTGCTGTGATTTCGCTGTaGGGCTTGATAGTGAATTTTCCCTCTGAATATGGG | + |
|
Preference number: 3 (lower is better) Translates to: ENKNSNTAVISL*GLIVNFPSEYG Trigger: CCCATATTCAGAGGGAAAATTCACTATCAAGCCTCACAGCGAAATCACAGCAGTGTTGGAATTCTTATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR GCA 72 bp | ATGCAGCGAGAAATCTTCAATAGAAAGATAATCTATTaGAGCATAGTGGGGCAGCTACAAAAACTTGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: MQREIFNRKIIY*SIVGQLQKLAC Trigger: GCAAGCAAGTTTTTGTAGCTGCCCCACTATGCTGCAATAGATTATCTTTCTATTGAAGATTTCTCGCTGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR-3UTR CAA 90 bp | ATATGCAGAGGTGACATATATGTTGTGAATTCTCACCCAAATCACTTTCTGATGGCTCATACGGATGTTTaGTTTTGTTTTAGCTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: ICRGDIYVVNSHPNHFLMAHTDV*FCFSCT Trigger: GGTGCAGCTAAAACAAAACAAAACATCCGTATGAGC...CATCAGAAAGTGATTTGGGTGAGAATTCACAACATATATGTCACCTCTGCATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| CDS-3UTR TCA 90 bp | CAAAGTACAGCTTCCAAGACTTCCCCCAACCAACCACCTAGGCGCTGCACCCACGTTCGGGTGCTTTGCTaGGCACAAATGCATAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSTASKTSPNQPPRRCTHVRVLC*AQMHKP Trigger: GGGCTTATGCATTTGTGCTCAGCAAAGCACCCGAAC...GTGGGTGCAGCGCCTAGGTGGTTGGTTGGGGGAAGTCTTGGAAGCTGTACTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR CAA 72 bp | CCGCCTGGCTCCCTTCCCTGGTCGTTCAGTTATGACTaGATCTACATGGGTCCTTTGTCTACCCTTGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPGSLPWSFSYD*IYMGPLSTLDP Trigger: GGGATCAAGGGTAGACAAAGGACCCATGTAGATCAAGTCATAACTGAACGACCAGGGAAGGGAGCCAGGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR CAA 72 bp | AGGCGCTGCACCCACCAGTACAACTCTAGGAAATGTTaGTGGGAAGATGGAAGCGTGGGTATCCATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRCTHQYNSRKC*WEDGSVGIHAL Trigger: CAGAGCATGGATACCCACGCTTCCATCTTCCCACAAACATTTCCTAGAGTTGTACTGGTGGGTGCAGCGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| CDS-3UTR GCA 90 bp | GCCAGCAGAGGGCACTTCTCAAGCCTCTGCACTGCTGAAGGGAGCAAATGCAGAATGTGGTGGTACCAGTaGAGGAAGATCAGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASRGHFSSLCTAEGSKCRMWWYQ*RKISFC Trigger: ACAGAAACTGATCTTCCTGCACTGGTACCACCACAT...TCTGCATTTGCTCCCTTCAGCAGTGCAGAGGCTTGAGAAGTGCCCTCTGCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| CDS-3UTR TCA 90 bp | GCCTCATTTAGAAAGCCAGGATTATGTGTGAGGTCGAACAGGGAGGGAGGCGAAACTCTGGTCACAAACTaGCTGCTTCAGGCCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASFRKPGLCVRSNREGGETLVTN*LLQAFG Trigger: ACCAAAGGCCTGAAGCAGTCAGTTTGTGACCAGAGT...TTCGCCTCCCTCCCTGTTCGACCTCACACATAATCCTGGCTTTCTAAATGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| 3UTR CAA 72 bp | CCTCCCTGTTCAGCTCCAGGGACGATGGGCTGGCATTaGTTACACATGGTACAAGACTCCATTTTCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPCSAPGTMGWH*LHMVQDSIFKP Trigger: TGGCTTGAAAATGGAGTCTTGTACCATGTGTAACAAATGCCAGCCCATCGTCCCTGGAGCTGAACAGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| CDS-3UTR GCA 90 bp | GGTGATGAACATGGCAAACTTCCGGGAGACTCGGAAACCCGCAGCCCGCAAGGCTCGTTCTCGTTGAACTaGTTTTCGAATTCATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GDEHGKLPGDSETRSPQGSFSLN*FSNSYS Trigger: AGAATATGAATTCGAAAAGCAGTTCAACGAGAACGA...GCCTTGCGGGCTGCGGGTTTCCGAGTCTCCCGGAAGTTTGCCATGTTCATCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197070.5 |
||
| 3UTR CAA 72 bp | GCTGCCTTGGGCCTCGTGCCTGCTCATACGGATGTTTaGTTTTGTTTTAGCTGCACCATATGGGATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AALGLVPAHTDV*FCFSCTIWDSL Trigger: CAAGGAATCCCATATGGTGCAGCTAAAACAAAACAAAACATCCGTATGAGCAGGCACGAGGCCCAAGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| CDS-3UTR GCA 90 bp | TTTGGTTGTAGCGAACATACAAGCCCTGAGGCTGTGCAGAAGGGGAAAGGCTCTTGGCTTTCTTCACTTTaGCGATGTAGGCCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FGCSEHTSPEAVQKGKGSWLSSL*RCRPQR Trigger: TCTTTGAGGCCTACATCGGCAAAGTGAAGAAAGCCA...AGAGCCTTTCCCCTTCTGCACAGCCTCAGGGCTTGTATGTTCGCTACAACCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| CDS-3UTR TCA 90 bp | CCTCACCCAGAAAGGATCATAAACTTACAACCTAATCTTCAGTCCCAAGCTGCCCGTAGTAAGAGTACATaGCGGCATGCACGCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: PHPERIINLQPNLQSQAARSKST*RHARHS Trigger: ACTATGGCGTGCATGCCGTCATGTACTCTTACTACG...GGCAGCTTGGGACTGAAGATTAGGTTGTAAGTTTATGATCCTTTCTGGGTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| CDS-3UTR CCA 90 bp | TTTGGTTGTAGCGAACATACAAGCCCTGAGGCTGTGCAGAAGGGGAAAGGCTCTTCCGAAGTTCAAACTTaGCTCGCTTGTTCATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FGCSEHTSPEAVQKGKGSSEVQT*LACSSD Trigger: ATCTGATGAACAAGCGAGCCAAGTTTGAACTTCGGA...AGAGCCTTTCCCCTTCTGCACAGCCTCAGGGCTTGTATGTTCGCTACAACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| CDS-3UTR CCA 90 bp | GCCCAATCTCTTTGCCCGTGGCTGCCTTTGCATCTAGTGTGTTCTAGAGTTGACTCCGAAGTTCAAACTTaGCTCGCTTGTTCATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AQSLCPWLPLHLVCSRVDSEVQT*LACSSD Trigger: ATCTGATGAACAAGCGAGCCAAGTTTGAACTTCGGA...GTCAACTCTAGAACACACTAGATGCAAAGGCAGCCACGGGCAAAGAGATTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| CDS-3UTR CCA 90 bp | ACTCCATTTTCAAGCCAGCCAGCTGAGCTTCTTCCCTTTCAGTTCTGCATTTACAGCACAGTGATGTGGTaGTACCAGTGCAGGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: TPFSSQPAELLPFQFCIYSTVMW*YQCRKI Trigger: GATCTTCCTGCACTGGTACCACCACATCACTGTGCT...GTAAATGCAGAACTGAAAGGGAAGAAGCTCAGCTGGCTGGCTTGAAAATGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| CDS-3UTR TCA 90 bp | AACAACGGATGCTTGAATTCTCGTCGGAGAGCAGAAATAACAGTTGTCAGTGTGACTCTGGTCACAAACTaGCTGCTTCAGGCCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NNGCLNSRRRAEITVVSVTLVTN*LLQAFG Trigger: ACCAAAGGCCTGAAGCAGTCAGTTTGTGACCAGAGT...CACACTGACAACTGTTATTTCTGCTCTCCGACGAGAATTCAAGCATCCGTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| CDS-3UTR TCA 90 bp | GTGTGTCACAGGGCCTCATTTAGAAAGCCAGGATTATGTGTGAGGTCGAACAGGAAGCCCAGAATTTGCTaGCAGGTCCATTGTAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VCHRASFRKPGLCVRSNRKPRIC*QVHCKN Trigger: GTTTTTACAATGGACCTGTCAGCAAATTCTGGGCTT...CCTGTTCGACCTCACACATAATCCTGGCTTTCTAAATGAGGCCCTGTGACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| CDS-3UTR TCA 90 bp | AACTACAGGGGTTTCTTTCTCCCAGTAATAAAGTATCATGGGGGAAGTACTGTCGTTCGGGTGCTTTGCTaGGCACAAATGCATAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NYRGFFLPVIKYHGGSTVVRVLC*AQMHKP Trigger: GGGCTTATGCATTTGTGCTCAGCAAAGCACCCGAAC...GACAGTACTTCCCCCATGATACTTTATTACTGGGAGAAAGAAACCCCTGTAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| CDS-3UTR CCA 90 bp | GGTACAAGACTCCATTTTCAAGCCAGCCAGCTGAGCTTCTTCCCTTTCAGTTCTTTTTCCTGCATCCATTaGATGGCTTCGTTCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTRLHFQASQLSFFPFSSFSCIH*MASFSL Trigger: CAACGAGAACGAAGCCATCCAATGGATGCAGGAAAA...AGAACTGAAAGGGAAGAAGCTCAGCTGGCTGGCTTGAAAATGGAGTCTTGTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR CAA 72 bp | AAACTGAACCGACCAGAGGAGCCTCAGGCTGGCCTTTaGATTAGACTCAATTCAACTGATAGGTGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLNRPEEPQAGL*IRLNSTDRWLL Trigger: AAGAAGCCACCTATCAGTTGAATTGAGTCTAATCAAAAGGCCAGCCTGAGGCTCCTCTGGTCGGTTCAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR CAA 72 bp | ATAAACTTACAACCTAATCTTCAGTCCCAAGCTGCCTaGGGCCTCGTGCCTGCTCATACGGATGTTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: INLQPNLQSQAA*GLVPAHTDVLF Trigger: AAACAAAACATCCGTATGAGCAGGCACGAGGCCCAAGGCAGCTTGGGACTGAAGATTAGGTTGTAAGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR CAA 72 bp | CTATTGCAGCATAGTGGGGCAGCTACAAAAACTTGCTaGCCCGGAATGTTCACTGACAGCAGTATTATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLQHSGAATKTC*PGMFTDSSIIY Trigger: GTAGATAATACTGCTGTCAGTGAACATTCCGGGCAAGCAAGTTTTTGTAGCTGCCCCACTATGCTGCAATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| CDS-3UTR TCA 90 bp | CCTCACCCAGAAAGGATCATAAACTTACAACCTAATCTTCAGTCCCAAGCTGCCTGGCTTCGTTCTCGTTaGACTGCTTTTCGAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PHPERIINLQPNLQSQAAWLRSR*TAFRIH Trigger: ATGAATTCGAAAAGCAGTTCAACGAGAACGAAGCCA...GGCAGCTTGGGACTGAAGATTAGGTTGTAAGTTTATGATCCTTTCTGGGTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| CDS-3UTR GCA 90 bp | GCCCAATCTCTTTGCCCGTGGCTGCCTTTGCATCTAGTGTGTTCTAGAGTTGACTCGTTCTCGTTGAACTaGTTTTCGAATTCATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQSLCPWLPLHLVCSRVDSFSLN*FSNSYS Trigger: AGAATATGAATTCGAAAAGCAGTTCAACGAGAACGA...GTCAACTCTAGAACACACTAGATGCAAAGGCAGCCACGGGCAAAGAGATTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| CDS-3UTR GCA 90 bp | GGGTTTCTTTCTCCCAGTAATAAAGTATCATGGGGGAAGTACTGTCCTGTGTTTTGGTCACAAACTGACTaGTTCAGGCCTTTGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GFLSPSNKVSWGKYCPVFWSQTD*FRPLVI Trigger: GATGACCAAAGGCCTGAAGCAGTCAGTTTGTGACCA...AAACACAGGACAGTACTTCCCCCATGATACTTTATTACTGGGAGAAAGAAACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| 3UTR CAA 72 bp | AGTGGTCAGTTATTTCAACCTACTGTGAAGTGTTTGTaGAAGCTTCTCACTAAGCCAGCAGAGGGCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGQLFQPTVKCL*KLLTKPAEGTS Trigger: AGAAGTGCCCTCTGCTGGCTTAGTGAGAAGCTTCAACAAACACTTCACAGTAGGTTGAAATAACTGACCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR CAA 72 bp | CTTAGTGGTCAGTTATTTCAACCTACTGTGAAGTGTTaGTTGAAGCTTCTCACTAAGCCAGCAGAGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSGQLFQPTVKC*LKLLTKPAEGT Trigger: AGTGCCCTCTGCTGGCTTAGTGAGAAGCTTCAACAAACACTTCACAGTAGGTTGAAATAACTGACCACTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| CDS-3UTR CCA 90 bp | GGGTTTCTTTCTCCCAGTAATAAAGTATCATGGGGGAAGTACTGTCCTGTGTTTACTGCTTCAGGCCTTTaGTCATCAGAATGTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GFLSPSNKVSWGKYCPVFTASGL*SSECTA Trigger: TGCTGTACATTCTGATGACCAAAGGCCTGAAGCAGT...AAACACAGGACAGTACTTCCCCCATGATACTTTATTACTGGGAGAAAGAAACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| CDS-3UTR TCA 90 bp | GGGTTTCTTTCTCCCAGTAATAAAGTATCATGGGGGAAGTACTGTCCTGTGTTTAAGCCCAGAATTTGCTaGCAGGTCCATTGTAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GFLSPSNKVSWGKYCPVFKPRIC*QVHCKN Trigger: GTTTTTACAATGGACCTGTCAGCAAATTCTGGGCTT...AAACACAGGACAGTACTTCCCCCATGATACTTTATTACTGGGAGAAAGAAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| CDS-3UTR TCA 90 bp | TTTGAAAGTCACAAAAATATAGAAAGCACAGAGTGTGTCACAGGGCCTCATTTACGTAGTAAGAGTACATaGCGGCATGCACGCCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: FESHKNIESTECVTGPHLRSKST*RHARHS Trigger: ACTATGGCGTGCATGCCGTCATGTACTCTTACTACG...TAAATGAGGCCCTGTGACACACTCTGTGCTTTCTATATTTTTGTGACTTTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| CDS-3UTR GCA 90 bp | GAAAGTCACAAAAATATAGAAAGCACAGAGTGTGTCACAGGGCCTCATTTAGAATGGTCACAAACTGACTaGTTCAGGCCTTTGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: ESHKNIESTECVTGPHLEWSQTD*FRPLVI Trigger: GATGACCAAAGGCCTGAAGCAGTCAGTTTGTGACCA...TTCTAAATGAGGCCCTGTGACACACTCTGTGCTTTCTATATTTTTGTGACTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| CDS-3UTR GCA 90 bp | GTAATAAAGTATCATGGGGGAAGTACTGTCCTGTGTTTGGTTGTAGCGAACATAATGTGGTGGTACCAGTaGAGGAAGATCAGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VIKYHGGSTVLCLVVANIMWWYQ*RKISFC Trigger: ACAGAAACTGATCTTCCTGCACTGGTACCACCACAT...TATGTTCGCTACAACCAAACACAGGACAGTACTTCCCCCATGATACTTTATTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| CDS-3UTR GCA 90 bp | TTGAATTCTCGTCGGAGAGCAGAAATAACAGTTGTCAGTGTGGTGTTTCAACTATGGCTTTCTTCACTTTaGCGATGTAGGCCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNSRRRAEITVVSVVFQLWLSSL*RCRPQR Trigger: TCTTTGAGGCCTACATCGGCAAAGTGAAGAAAGCCA...TAGTTGAAACACCACACTGACAACTGTTATTTCTGCTCTCCGACGAGAATTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| CDS-3UTR CCA 90 bp | GTAATAAAGTATCATGGGGGAAGTACTGTCCTGTGTTTGGTTGTAGCGAACATATTTTCCTGCATCCATTaGATGGCTTCGTTCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VIKYHGGSTVLCLVVANIFSCIH*MASFSL Trigger: CAACGAGAACGAAGCCATCCAATGGATGCAGGAAAA...TATGTTCGCTACAACCAAACACAGGACAGTACTTCCCCCATGATACTTTATTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| CDS-3UTR CCA 90 bp | TTGAATTCTCGTCGGAGAGCAGAAATAACAGTTGTCAGTGTGGTGTTTCAACTAACTGCTTCAGGCCTTTaGTCATCAGAATGTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNSRRRAEITVVSVVFQLTASGL*SSECTA Trigger: TGCTGTACATTCTGATGACCAAAGGCCTGAAGCAGT...TAGTTGAAACACCACACTGACAACTGTTATTTCTGCTCTCCGACGAGAATTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| CDS-3UTR CCA 90 bp | AAGCATAGAGGTTCTCTCTCTCTTCTGATTTGGTCAAATATATGTCAGGTGTTTAGCACAGTGATGTGGTaGTACCAGTGCAGGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: KHRGSLSLLIWSNICQVFSTVMW*YQCRKI Trigger: GATCTTCCTGCACTGGTACCACCACATCACTGTGCT...AAACACCTGACATATATTTGACCAAATCAGAAGAGAGAGAGAACCTCTATGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071402.7 ENSMUST00000199910.5 |
||
| 3UTR CAA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGCTCACATCGTTaGAAAAGGGGAAACTCCTTTATCCTTAGAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCSHR*KRGNSFILREK Trigger: TTTTTCTCTAAGGATAAAGGAGTTTCCCCTTTTCAAACGATGTGAGCACACACACACACACACACACACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| CDS-3UTR TCA 90 bp | AAAAATATAGAAAGCACAGAGTGTGTCACAGGGCCTCATTTAGAAAGCCAGGATTGGCTTCGTTCTCGTTaGACTGCTTTTCGAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KNIESTECVTGPHLESQDWLRSR*TAFRIH Trigger: ATGAATTCGAAAAGCAGTTCAACGAGAACGAAGCCA...ATCCTGGCTTTCTAAATGAGGCCCTGTGACACACTCTGTGCTTTCTATATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| CDS-3UTR CCA 90 bp | GAAAGTCACAAAAATATAGAAAGCACAGAGTGTGTCACAGGGCCTCATTTAGAATTTTCCTGCATCCATTaGATGGCTTCGTTCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ESHKNIESTECVTGPHLEFSCIH*MASFSL Trigger: CAACGAGAACGAAGCCATCCAATGGATGCAGGAAAA...TTCTAAATGAGGCCCTGTGACACACTCTGTGCTTTCTATATTTTTGTGACTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
||
| 3UTR CAA 72 bp | ATTCAACTGATAGGTGGCTTCTTGGTTTTCATTATCTaGCTCACTTTCTTCCATAAGGCAAGGGAAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IQLIGGFLVFII*LTFFHKARERL Trigger: AAGCCTTTCCCTTGCCTTATGGAAGAAAGTGAGCAAGATAATGAAAACCAAGAAGCCACCTATCAGTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| CDS-3UTR TCA 90 bp | ATATGCAGAGGTGACATATATGTTGTGAATTCTCACCCAAATCACTTTCTGATGTGGCTTCGTTCTCGTTaGACTGCTTTTCGAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ICRGDIYVVNSHPNHFLMWLRSR*TAFRIH Trigger: ATGAATTCGAAAAGCAGTTCAACGAGAACGAAGCCA...CATCAGAAAGTGATTTGGGTGAGAATTCACAACATATATGTCACCTCTGCATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR CAA 72 bp | CTAGTGACCGCACTGCGTTTATATGAAACCTTGGATTaGTGTTCATTCAATCCAGGAATTAAGTTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LVTALRLYETLD*CSFNPGIKFSP Trigger: TGGTGAAAACTTAATTCCTGGATTGAATGAACACAAATCCAAGGTTTCATATAAACGCAGTGCGGTCACTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| 3UTR CAA 72 bp | TCAGACCTAGTGACCGCACTGCGTTTATATGAAACCTaGGATTTGTGTTCATTCAATCCAGGAATTAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SDLVTALRLYET*DLCSFNPGIKF Trigger: AAACTTAATTCCTGGATTGAATGAACACAAATCCAAGGTTTCATATAAACGCAGTGCGGTCACTAGGTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071402.7 |
||
| CDS-3UTR GCA 90 bp | TTGAATTCTCGTCGGAGAGCAGAAATAACAGTTGTCAGTGTGGTGTTTCAACTATCGTTCTCGTTGAACTaGTTTTCGAATTCATATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNSRRRAEITVVSVVFQLSFSLN*FSNSYS Trigger: AGAATATGAATTCGAAAAGCAGTTCAACGAGAACGA...TAGTTGAAACACCACACTGACAACTGTTATTTCTGCTCTCCGACGAGAATTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS GCA 90 bp | ACGAGCGGCTTCCGAAGTTCAAACTTGGCTCGCTTGTTCATCAGATaGCGACCACCAAAGATAAAGGCAGCGTACAGCGCAGAAAACAGG | + |
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Preference number: 5 (lower is better) Translates to: TSGFRSSNLARLFIR*RPPKIKAAYSAENR Trigger: CCTGTTTTCTGCGCTGTACGCTGCCTTTATCTTTGGTGGTCGGCATCTGATGAACAAGCGAGCCAAGTTTGAACTTCGGAAGCCGCTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS-3UTR CAA 90 bp | TTTGGTTGTAGCGAACATACAAGCCCTGAGGCTGTGCAGAAGGGGAAAGGCTCTGTTTTCCTGCATCCATaGGATGGCTTCGTTCTCGTT | + |
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Preference number: 5 (lower is better) Translates to: FGCSEHTSPEAVQKGKGSVFLHP*DGFVLV Trigger: AACGAGAACGAAGCCATCCAATGGATGCAGGAAAAC...AGAGCCTTTCCCCTTCTGCACAGCCTCAGGGCTTGTATGTTCGCTACAACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS-3UTR CAA 90 bp | CAGTTCTGCATTTACTCCTCCGTCCTAAAGTTTGGGGCAACTGAACAACGGATGATGGCTTCGTTCTCGTaGAACTGCTTTTCGAATTCA | + |
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Preference number: 5 (lower is better) Translates to: QFCIYSSVLKFGATEQRMMASFS*NCFSNS Trigger: TGAATTCGAAAAGCAGTTCAACGAGAACGAAGCCAT...CATCCGTTGTTCAGTTGCCCCAAACTTTAGGACGGAGGAGTAAATGCAGAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS TCA 90 bp | CCAGAATTTGCTGACAGGTCCATTGTAAAAACTCTGGTCACAAACTaGCTGCTTCAGGCCTTTGGTCATCAGAATGTACAGCATGTAAGC | + |
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Preference number: 5 (lower is better) Translates to: PEFADRSIVKTLVTN*LLQAFGHQNVQHVS Trigger: GCTTACATGCTGTACATTCTGATGACCAAAGGCCTGAAGCAGTCAGTTTGTGACCAGAGTTTTTACAATGGACCTGTCAGCAAATTCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197235.5 ENSMUST00000199910.5 |
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| CDS-3UTR CAA 90 bp | TTGAATTCTCGTCGGAGAGCAGAAATAACAGTTGTCAGTGTGGTGTTTCAACTAGTTTTCCTGCATCCATaGGATGGCTTCGTTCTCGTT | + |
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Preference number: 5 (lower is better) Translates to: LNSRRRAEITVVSVVFQLVFLHP*DGFVLV Trigger: AACGAGAACGAAGCCATCCAATGGATGCAGGAAAAC...TAGTTGAAACACCACACTGACAACTGTTATTTCTGCTCTCCGACGAGAATTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGCTCACATCGTTTGAAAAGGGGAAACTCCTTTATCCTTAGAGAAAAAGTTTTCCTGCATCCATaGGATGGCTTCGTTCTCGTT | + |
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Preference number: 5 (lower is better) Translates to: CVCSHRLKRGNSFILREKVFLHP*DGFVLV Trigger: AACGAGAACGAAGCCATCCAATGGATGCAGGAAAAC...TTTTTCTCTAAGGATAAAGGAGTTTCCCCTTTTCAAACGATGTGAGCACACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS-3UTR CAA 90 bp | GTAATAAAGTATCATGGGGGAAGTACTGTCCTGTGTTTGGTTGTAGCGAACATAATGGCTTCGTTCTCGTaGAACTGCTTTTCGAATTCA | + |
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Preference number: 5 (lower is better) Translates to: VIKYHGGSTVLCLVVANIMASFS*NCFSNS Trigger: TGAATTCGAAAAGCAGTTCAACGAGAACGAAGCCAT...TATGTTCGCTACAACCAAACACAGGACAGTACTTCCCCCATGATACTTTATTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS TCA 90 bp | ACTTCTTCCAGTTTTCCTGCATCCATTGGATGGCTTCGTTCTCGTTaGACTGCTTTTCGAATTCATATTCTTGTAAAGTCAACACTGACA | + |
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Preference number: 5 (lower is better) Translates to: TSSSFPASIGWLRSR*TAFRIHILVKSTLT Trigger: TGTCAGTGTTGACTTTACAAGAATATGAATTCGAAAAGCAGTTCAACGAGAACGAAGCCATCCAATGGATGCAGGAAAACTGGAAGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS CCA 72 bp | GCGACCAGAGCACGAGCGGCTTCCGAAGTTCAAACTTaGCTCGCTTGTTCATCAGATGCCGACCACCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: ATRARAASEVQT*LACSSDADHQR Trigger: TCTTTGGTGGTCGGCATCTGATGAACAAGCGAGCCAAGTTTGAACTTCGGAAGCCGCTCGTGCTCTGGTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS CAA 72 bp | AGCGACCAGAGCACGAGCGGCTTCCGAAGTTCAAACTaGGCTCGCTTGTTCATCAGATGCCGACCACCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SDQSTSGFRSSN*ARLFIRCRPPK Trigger: CTTTGGTGGTCGGCATCTGATGAACAAGCGAGCCAAGTTTGAACTTCGGAAGCCGCTCGTGCTCTGGTCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS CAA 90 bp | AGCGACCAGAGCACGAGCGGCTTCCGAAGTTCAAACTTGGCTCGCTaGTTCATCAGATGCCGACCACCAAAGATAAAGGCAGCGTACAGC | + |
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Preference number: 6 (lower is better) Translates to: SDQSTSGFRSSNLAR*FIRCRPPKIKAAYS Trigger: GCTGTACGCTGCCTTTATCTTTGGTGGTCGGCATCTGATGAACAAGCGAGCCAAGTTTGAACTTCGGAAGCCGCTCGTGCTCTGGTCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS CAA 90 bp | GCAAGAGTCAGCGACCAGAGCACGAGCGGCTTCCGAAGTTCAAACTaGGCTCGCTTGTTCATCAGATGCCGACCACCAAAGATAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: ARVSDQSTSGFRSSN*ARLFIRCRPPKIKA Trigger: TGCCTTTATCTTTGGTGGTCGGCATCTGATGAACAAGCGAGCCAAGTTTGAACTTCGGAAGCCGCTCGTGCTCTGGTCGCTGACTCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS CAA 72 bp | AGCACGAGCGGCTTCCGAAGTTCAAACTTGGCTCGCTaGTTCATCAGATGCCGACCACCAAAGATAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: STSGFRSSNLAR*FIRCRPPKIKA Trigger: TGCCTTTATCTTTGGTGGTCGGCATCTGATGAACAAGCGAGCCAAGTTTGAACTTCGGAAGCCGCTCGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS GCA 72 bp | TTCCGAAGTTCAAACTTGGCTCGCTTGTTCATCAGATaGCGACCACCAAAGATAAAGGCAGCGTACAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: FRSSNLARLFIR*RPPKIKAAYSA Trigger: TGCGCTGTACGCTGCCTTTATCTTTGGTGGTCGGCATCTGATGAACAAGCGAGCCAAGTTTGAACTTCGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS TCA 72 bp | GCTGACAGGTCCATTGTAAAAACTCTGGTCACAAACTaGCTGCTTCAGGCCTTTGGTCATCAGAATGTACAG | + |
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Preference number: 6 (lower is better) Translates to: ADRSIVKTLVTN*LLQAFGHQNVQ Trigger: CTGTACATTCTGATGACCAAAGGCCTGAAGCAGTCAGTTTGTGACCAGAGTTTTTACAATGGACCTGTCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197235.5 ENSMUST00000199910.5 |
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| CDS CAA 72 bp | AAACAGGAAAGACTTCTTCCAGTTTTCCTGCATCCATaGGATGGCTTCGTTCTCGTTGAACTGCTTTTCGAA | + |
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Preference number: 6 (lower is better) Translates to: KQERLLPVFLHP*DGFVLVELLFE Trigger: TTCGAAAAGCAGTTCAACGAGAACGAAGCCATCCAATGGATGCAGGAAAACTGGAAGAAGTCTTTCCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS CAA 72 bp | CAGTTTTCCTGCATCCATTGGATGGCTTCGTTCTCGTaGAACTGCTTTTCGAATTCATATTCTTGTAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: QFSCIHWMASFS*NCFSNSYSCKV Trigger: GACTTTACAAGAATATGAATTCGAAAAGCAGTTCAACGAGAACGAAGCCATCCAATGGATGCAGGAAAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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| CDS TCA 72 bp | AGTTTTCCTGCATCCATTGGATGGCTTCGTTCTCGTTaGACTGCTTTTCGAATTCATATTCTTGTAAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: SFPASIGWLRSR*TAFRIHILVKS Trigger: TGACTTTACAAGAATATGAATTCGAAAAGCAGTTCAACGAGAACGAAGCCATCCAATGGATGCAGGAAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071402.7 ENSMUST00000197070.5 ENSMUST00000199910.5 |
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