Pregenerated sensors for ELOVL5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032349Ensembl transcript IDs: ENSMUST00000034904.14, ENSMUST00000133757.8, ENSMUST00000134072.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTATCAAATGTTATAATTTTTGTATTGAGATATGTAAAGACACCTaGAGACGGGTACCTAGGGAGAAGACACACACATACACACATTCT | + |
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Preference number: 1 (lower is better) Translates to: TIKCYNFCIEICKDT*RRVPREKTHTYTHS Trigger: AGAATGTGTGTATGTGTGTGTCTTCTCCCTAGGTACCCGTCTGCAGGTGTCTTTACATATCTCAATACAAAAATTATAACATTTGATAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| 3UTR-3UTR TCA 90 bp | CTTCCAAACAGAAAACCCACAAGGCTAATTAGGACCAACTGGCTCCTTGTAATATCTCGTCACCTTTCCTaGAAGGTAGTTCTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LPNRKPTRLIRTNWLLVISRHLS*KVVLSL Trigger: GAGAGAGAGAACTACCTTTCAGGAAAGGTGACGAGA...TATTACAAGGAGCCAGTTGGTCCTAATTAGCCTTGTGGGTTTTCTGTTTGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| 3UTR-3UTR TCA 90 bp | AGTGTCTCCAGACGCTTTGGACCCTTTCCCCACCTCTTTAAACACATTAATAGTCATCTCCAAGTCACTTaGAGTTACACATCACACACT | + |
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Preference number: 2 (lower is better) Translates to: SVSRRFGPFPHLFKHINSHLQVT*SYTSHT Trigger: AGTGTGTGATGTGTAACTTCAAGTGACTTGGAGATG...ACTATTAATGTGTTTAAAGAGGTGGGGAAAGGGTCCAAAGCGTCTGGAGACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| 3UTR-3UTR CCA 90 bp | CTTCCAAACAGAAAACCCACAAGGCTAATTAGGACCAACTGGCTCCTTGTAATAGCTTATGGTGCTTCCTaGTCTCTTGGTAAATTAGGC | + |
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Preference number: 2 (lower is better) Translates to: LPNRKPTRLIRTNWLLVIAYGAS*SLGKLG Trigger: GCCTAATTTACCAAGAGACCAGGAAGCACCATAAGC...TATTACAAGGAGCCAGTTGGTCCTAATTAGCCTTGTGGGTTTTCTGTTTGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| 3UTR-3UTR CCA 90 bp | CTTCCAAACAGAAAACCCACAAGGCTAATTAGGACCAACTGGCTCCTTGTAATATGGTGGGAAGTCGAATaGCCTTTTTATCTCCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: LPNRKPTRLIRTNWLLVIWWEVE*PFYLLY Trigger: ATACAGGAGATAAAAAGGCCATTCGACTTCCCACCA...TATTACAAGGAGCCAGTTGGTCCTAATTAGCCTTGTGGGTTTTCTGTTTGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| 3UTR-3UTR GCA 90 bp | AAGACACACACATACACACATTCTAGATCTGACAAGGGAAATGTAAACAGATGCTCATCTCCTAAGATGTaGCATGAGTGGTTCCATGGA | + |
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Preference number: 2 (lower is better) Translates to: KTHTYTHSRSDKGNVNRCSSPKM*HEWFHG Trigger: TCCATGGAACCACTCATGGCACATCTTAGGAGATGA...GCATCTGTTTACATTTCCCTTGTCAGATCTAGAATGTGTGTATGTGTGTGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| 3UTR TCA 72 bp | CAAGGGTGCCATCAGATTTCGCATCTCCAAGTCACTTaGAGTTACACATCACACACTTGTTTCATAAATCAT | + |
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Preference number: 3 (lower is better) Translates to: QGCHQISHLQVT*SYTSHTCFINH Trigger: ATGATTTATGAAACAAGTGTGTGATGTGTAACTTCAAGTGACTTGGAGATGCGAAATCTGATGGCACCCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| 3UTR TCA 72 bp | ACAGTGTGGGTATATCCAGATGAGCTAAGCACACTTTaGCAGCACACTATCAAATGTTATAATTTTTGTATT | + |
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Preference number: 3 (lower is better) Translates to: TVWVYPDELSTL*QHTIKCYNFCI Trigger: AATACAAAAATTATAACATTTGATAGTGTGCTGTCAAAGTGTGCTTAGCTCATCTGGATATACCCACACTGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR TCA 90 bp | GCTATGAGCGTCAGGGCACAAGTCACGCTGTGCTTACAATCACACGCCGCGGTCAGACATGGAGCACGGTaGTCTGGTGGTTGTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: AMSVRAQVTLCLQSHAAVRHGAR*SGGCSC Trigger: GCAAGAACAACCACCAGATCACCGTGCTCCATGTCT...GACCGCGGCGTGTGATTGTAAGCACAGCGTGACTTGTGCCCTGACGCTCATAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR CCA 90 bp | ACTACAAGAACATTCCCTTTCCACAGTCTAGCGCGGGGGTCGATGAGAGCCCAGACAGACCCGTTCTGGTaGCCCTTCAGGTGGTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TTRTFPFHSLARGSMRAQTDPFW*PFRWSF Trigger: GAAAGACCACCTGAAGGGCCACCAGAACGGGTCTGT...CTGGGCTCTCATCGACCCCCGCGCTAGACTGTGGAAAGGGAATGTTCTTGTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR TCA 90 bp | TTCCCTTTCCACAGTCTAGCGCGGGGGTCGATGAGAGCCCAGAAATGTGAGAAACGCAGGTCGTCTGGATaGTTGTCAGCACAAACTGGA | + |
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Preference number: 4 (lower is better) Translates to: FPFHSLARGSMRAQKCEKRRSSG*LSAQTG Trigger: TCCAGTTTGTGCTGACAATCATCCAGACGACCTGCG...TTTCTCACATTTCTGGGCTCTCATCGACCCCCGCGCTAGACTGTGGAAAGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR CCA 90 bp | ACTACAAGAACATTCCCTTTCCACAGTCTAGCGCGGGGGTCGATGAGAGCCCAGGCGCTGCGTGTTCCCTaGCAGAAAAAGTTGTATTTG | + |
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Preference number: 4 (lower is better) Translates to: TTRTFPFHSLARGSMRAQALRVP*QKKLYL Trigger: CAAATACAACTTTTTCTGCCAGGGAACACGCAGCGC...CTGGGCTCTCATCGACCCCCGCGCTAGACTGTGGAAAGGGAATGTTCTTGTAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR GCA 90 bp | GCTATGAGCGTCAGGGCACAAGTCACGCTGTGCTTACAATCACACGCCGCGGTCAGAAAAAGTTGTATTTaGCTTCCCACACACCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: AMSVRAQVTLCLQSHAAVRKSCI*LPTHLS Trigger: TGACAGGTGTGTGGGAAGGCAAATACAACTTTTTCT...GACCGCGGCGTGTGATTGTAAGCACAGCGTGACTTGTGCCCTGACGCTCATAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR CCA 90 bp | AGTGTCTCCAGACGCTTTGGACCCTTTCCCCACCTCTTTAAACACATTAATAGTGCCACAGACCCGTTCTaGTGGCCCTTCAGGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SVSRRFGPFPHLFKHINSATDPF*WPFRWS Trigger: AGACCACCTGAAGGGCCACCAGAACGGGTCTGTGGC...ACTATTAATGTGTTTAAAGAGGTGGGGAAAGGGTCCAAAGCGTCTGGAGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR CCA 90 bp | CTTCCAAACAGAAAACCCACAAGGCTAATTAGGACCAACTGGCTCCTTGTAATATGGTGGCCCTTCAGGTaGTCTTTCCTCCGAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LPNRKPTRLIRTNWLLVIWWPFR*SFLREA Trigger: GGCCTCTCGGAGGAAAGACCACCTGAAGGGCCACCA...TATTACAAGGAGCCAGTTGGTCCTAATTAGCCTTGTGGGTTTTCTGTTTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR TCA 90 bp | ACACACATGAAAAGAGTCCCCATTTGTATGACCGATGCCTCGAGCGCACTAGACAGAGAGACAGCAGGGTaGGTCCAAGGTTATACAACT | + |
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Preference number: 4 (lower is better) Translates to: THMKRVPICMTDASSALDRETAG*VQGYTT Trigger: AGTTGTATAACCTTGGACTCACCCTGCTGTCTCTCT...GTCTAGTGCGCTCGAGGCATCGGTCATACAAATGGGGACTCTTTTCATGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR TCA 90 bp | CTGAAAGGTAGTTCTCTCTCTCCAAGTGGTGGGAAGTCGAATGGCCTTTTTATCCCAGCTGCCCTTGAGTaGTGTACTTTTTCCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: LKGSSLSPSGGKSNGLFIPAALE*CTFSTR Trigger: TCTGGTGGAAAAAGTACATCACTCAAGGGCAGCTGG...GATAAAAAGGCCATTCGACTTCCCACCACTTGGAGAGAGAGAACTACCTTTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR CCA 90 bp | TCACCTTTCCTGAAAGGTAGTTCTCTCTCTCCAAGTGGTGGGAAGTCGAATGGCATCATGTATCCAATCTaGAAGAACAGCCACCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: SPFLKGSSLSPSGGKSNGIMYPI*KNSHPR Trigger: TCTCGGGTGGCTGTTCTTCCAGATTGGATACATGAT...GCCATTCGACTTCCCACCACTTGGAGAGAGAGAACTACCTTTCAGGAAAGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR CCA 90 bp | CTTCCAAACAGAAAACCCACAAGGCTAATTAGGACCAACTGGCTCCTTGTAATAACCCCGCAGGTCGTCTaGATGATTGTCAGCACAAAC | + |
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Preference number: 4 (lower is better) Translates to: LPNRKPTRLIRTNWLLVITPQVV*MIVSTN Trigger: GTTTGTGCTGACAATCATCCAGACGACCTGCGGGGT...TATTACAAGGAGCCAGTTGGTCCTAATTAGCCTTGTGGGTTTTCTGTTTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR TCA 90 bp | CTTCCAAACAGAAAACCCACAAGGCTAATTAGGACCAACTGGCTCCTTGTAATATGGACCAGCTGCCCTTaGGTGATGTACTTTTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LPNRKPTRLIRTNWLLVIWTSCP*VMYFFH Trigger: GTGGAAAAAGTACATCACTCAAGGGCAGCTGGTCCA...TATTACAAGGAGCCAGTTGGTCCTAATTAGCCTTGTGGGTTTTCTGTTTGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR CCA 90 bp | TCTAGATCTGACAAGGGAAATGTAAACAGATGCCGCAACTCCTTCCAAACAGAAAGCACGGTGATCTGGTaGTTGTTCTTGCGAAGGATG | + |
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Preference number: 4 (lower is better) Translates to: SRSDKGNVNRCRNSFQTESTVIW*LFLRRM Trigger: CATCCTTCGCAAGAACAACCACCAGATCACCGTGCT...TTCTGTTTGGAAGGAGTTGCGGCATCTGTTTACATTTCCCTTGTCAGATCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR CCA 90 bp | TGGTGGGAAGTCGAATGGCCTTTTTATCTCCTGTATAAAAACACTAAGCACTTCTGGAGCACGGTGATCTaGTGGTTGTTCTTGCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: WWEVEWPFYLLYKNTKHFWSTVI*WLFLRR Trigger: CCTTCGCAAGAACAACCACCAGATCACCGTGCTCCA...GAAGTGCTTAGTGTTTTTATACAGGAGATAAAAAGGCCATTCGACTTCCCACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR TCA 90 bp | AGTGTCTCCAGACGCTTTGGACCCTTTCCCCACCTCTTTAAACACATTAATAGTGAAATAGGTACTGAGTaGCGCATCGAAATGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SVSRRFGPFPHLFKHINSEIGTE*RIEMFH Trigger: ATGGAACATTTCGATGCGTCACTCAGTACCTATTTC...ACTATTAATGTGTTTAAAGAGGTGGGGAAAGGGTCCAAAGCGTCTGGAGACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR CCA 90 bp | AGTGTCTCCAGACGCTTTGGACCCTTTCCCCACCTCTTTAAACACATTAATAGTGTTCTTCATGTATTTTaGTCCCAGCCATACAATGAG | + |
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Preference number: 4 (lower is better) Translates to: SVSRRFGPFPHLFKHINSVLHVF*SQPYNE Trigger: CTCATTGTATGGCTGGGACCAAAATACATGAAGAAC...ACTATTAATGTGTTTAAAGAGGTGGGGAAAGGGTCCAAAGCGTCTGGAGACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR TCA 90 bp | CTTCCAAACAGAAAACCCACAAGGCTAATTAGGACCAACTGGCTCCTTGTAATAGAATGTAGAAGTTTGTaGAGAGAGCAATCAGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LPNRKPTRLIRTNWLLVIECRSL*REQSGK Trigger: TTTCCCTGATTGCTCTCTTCACAAACTTCTACATTC...TATTACAAGGAGCCAGTTGGTCCTAATTAGCCTTGTGGGTTTTCTGTTTGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS CCA 90 bp | GGGAAGCTGTTGGTGTGTCCGTTGACGGCGGCCACAGACCCGTTCTaGTGGCCCTTCAGGTGGTCTTTCCTCCGAGAGGCCCCTTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: GKLLVCPLTAATDPF*WPFRWSFLREAPFL Trigger: CAAGAAAGGGGCCTCTCGGAGGAAAGACCACCTGAAGGGCCACCAGAACGGGTCTGTGGCCGCCGTCAACGGACACACCAACAGCTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS TCA 90 bp | GCTTCACGCTGTTTTCCAGGGAAGGGAAGCTGTTGGTGTGTCCGTTaGCGGCGGCCACAGACCCGTTCTGGTGGCCCTTCAGGTGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: ASRCFPGKGSCWCVR*RRPQTRSGGPSGGL Trigger: AAGACCACCTGAAGGGCCACCAGAACGGGTCTGTGGCCGCCGTCAACGGACACACCAACAGCTTCCCTTCCCTGGAAAACAGCGTGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS CCA 90 bp | AAGCTGTTGGTGTGTCCGTTGACGGCGGCCACAGACCCGTTCTGGTaGCCCTTCAGGTGGTCTTTCCTCCGAGAGGCCCCTTTCTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: KLLVCPLTAATDPFW*PFRWSFLREAPFLL Trigger: CAACAAGAAAGGGGCCTCTCGGAGGAAAGACCACCTGAAGGGCCACCAGAACGGGTCTGTGGCCGCCGTCAACGGACACACCAACAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR CAA 90 bp | GCTATGAGCGTCAGGGCACAAGTCACGCTGTGCTTACAATCACACGCCGCGGTCAGGGAAGGGAAGCTGTaGGTGTGTCCGTTGACGGCG | + |
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Preference number: 5 (lower is better) Translates to: AMSVRAQVTLCLQSHAAVREGKL*VCPLTA Trigger: CGCCGTCAACGGACACACCAACAGCTTCCCTTCCCT...GACCGCGGCGTGTGATTGTAAGCACAGCGTGACTTGTGCCCTGACGCTCATAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS CCA 90 bp | CATGTATCCAATCTGGAAGAACAGCCACCCGAGAGGGAAGGAGCATaGCCAGAAGACCCCGCAGGTCGTCTGGATGATTGTCAGCACAAA | + |
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Preference number: 5 (lower is better) Translates to: HVSNLEEQPPEREGA*PEDPAGRLDDCQHK Trigger: TTTGTGCTGACAATCATCCAGACGACCTGCGGGGTCTTCTGGCCATGCTCCTTCCCTCTCGGGTGGCTGTTCTTCCAGATTGGATACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR CAA 90 bp | ACTACAAGAACATTCCCTTTCCACAGTCTAGCGCGGGGGTCGATGAGAGCCCAGCTGGACCAGCTGCCCTaGAGTGATGTACTTTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: TTRTFPFHSLARGSMRAQLDQLP*SDVLFP Trigger: TGGAAAAAGTACATCACTCAAGGGCAGCTGGTCCAG...CTGGGCTCTCATCGACCCCCGCGCTAGACTGTGGAAAGGGAATGTTCTTGTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS CCA 90 bp | ACGCGGATGATCTTCATATCGGATTCTCCCGCGCTGCGTGTTCCCTaGCAGAAAAAGTTGTATTTGCCTTCCCACACACCTGTCACCAAC | + |
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Preference number: 5 (lower is better) Translates to: TRMIFISDSPALRVP*QKKLYLPSHTPVTN Trigger: GTTGGTGACAGGTGTGTGGGAAGGCAAATACAACTTTTTCTGCCAGGGAACACGCAGCGCGGGAGAATCCGATATGAAGATCATCCGCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034904.14 ENSMUST00000133757.8 |
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| CDS-3UTR CAA 90 bp | CAGGGACAGGTACGTAAGTGTCTCCAGACGCTTTGGACCCTTTCCCCACCTCTTCCCTGGCAGAAAAAGTaGTATTTGCCTTCCCACACA | + |
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Preference number: 5 (lower is better) Translates to: QGQVRKCLQTLWTLSPPLPWQKK*YLPSHT Trigger: TGTGTGGGAAGGCAAATACAACTTTTTCTGCCAGGG...AAGAGGTGGGGAAAGGGTCCAAAGCGTCTGGAGACACTTACGTACCTGTCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR CAA 90 bp | GCTATGAGCGTCAGGGCACAAGTCACGCTGTGCTTACAATCACACGCCGCGGTCATCTGGTGGTTGTTCTaGCGAAGGATGAAGAAAAAG | + |
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Preference number: 5 (lower is better) Translates to: AMSVRAQVTLCLQSHAAVIWWLF*RRMKKK Trigger: CTTTTTCTTCATCCTTCGCAAGAACAACCACCAGAT...GACCGCGGCGTGTGATTGTAAGCACAGCGTGACTTGTGCCCTGACGCTCATAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS GCA 90 bp | CGGATTCTCCCGCGCTGCGTGTTCCCTGGCAGAAAAAGTTGTATTTaGCTTCCCACACACCTGTCACCAACTCATAGAACATGTAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: RILPRCVFPGRKSCI*LPTHLSPTHRTCRE Trigger: CTCTCTACATGTTCTATGAGTTGGTGACAGGTGTGTGGGAAGGCAAATACAACTTTTTCTGCCAGGGAACACGCAGCGCGGGAGAATCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034904.14 ENSMUST00000133757.8 |
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| CDS-3UTR CAA 90 bp | ACACACATGAAAAGAGTCCCCATTTGTATGACCGATGCCTCGAGCGCACTAGACACAAACCACCAGATGTaGAGCATGGTAGCGTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: THMKRVPICMTDASSALDTNHQM*SMVAWW Trigger: CCACCACGCTACCATGCTCAACATCTGGTGGTTTGT...GTCTAGTGCGCTCGAGGCATCGGTCATACAAATGGGGACTCTTTTCATGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS TCA 90 bp | ACACACCTGTCACCAACTCATAGAACATGTAGAGAGACAGCAGGGTaGGTCCAAGGTTATACAACTGCAGGATGCCTCGGCAAGAGAACG | + |
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Preference number: 5 (lower is better) Translates to: THLSPTHRTCRETAG*VQGYTTAGCLGKRT Trigger: CGTTCTCTTGCCGAGGCATCCTGCAGTTGTATAACCTTGGACTCACCCTGCTGTCTCTCTACATGTTCTATGAGTTGGTGACAGGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034904.14 ENSMUST00000133757.8 |
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| CDS GCA 90 bp | AGTCCAAGGTTATACAACTGCAGGATGCCTCGGCAAGAGAACGGCTaGCGGTTCTTCATGTATTTTGGTCCCAGCCATACAATGAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: SPRLYNCRMPRQENG*RFFMYFGPSHTMSK Trigger: CTTACTCATTGTATGGCTGGGACCAAAATACATGAAGAACCGGCAGCCGTTCTCTTGCCGAGGCATCCTGCAGTTGTATAACCTTGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034904.14 ENSMUST00000133757.8 |
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| CDS-3UTR CAA 90 bp | CTGAAAGGTAGTTCTCTCTCTCCAAGTGGTGGGAAGTCGAATGGCCTTTTTATCACATGGATGAAGCTGTaGAGTGTCGCACCAAAATAT | + |
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Preference number: 5 (lower is better) Translates to: LKGSSLSPSGGKSNGLFITWMKL*SVAPKY Trigger: ATATTTTGGTGCGACACTCAACAGCTTCATCCATGT...GATAAAAAGGCCATTCGACTTCCCACCACTTGGAGAGAGAGAACTACCTTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS-3UTR CAA 90 bp | AAGACACACACATACACACATTCTAGATCTGACAAGGGAAATGTAAACAGATGCACGGTGATCTGGTGGTaGTTCTTGCGAAGGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: KTHTYTHSRSDKGNVNRCTVIWW*FLRRMK Trigger: CTTCATCCTTCGCAAGAACAACCACCAGATCACCGT...GCATCTGTTTACATTTCCCTTGTCAGATCTAGAATGTGTGTATGTGTGTGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS CCA 72 bp | GTGTGTCCGTTGACGGCGGCCACAGACCCGTTCTGGTaGCCCTTCAGGTGGTCTTTCCTCCGAGAGGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: VCPLTAATDPFW*PFRWSFLREAP Trigger: AGGGGCCTCTCGGAGGAAAGACCACCTGAAGGGCCACCAGAACGGGTCTGTGGCCGCCGTCAACGGACACAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS CCA 72 bp | TTGGTGTGTCCGTTGACGGCGGCCACAGACCCGTTCTaGTGGCCCTTCAGGTGGTCTTTCCTCCGAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LVCPLTAATDPF*WPFRWSFLREA Trigger: GGCCTCTCGGAGGAAAGACCACCTGAAGGGCCACCAGAACGGGTCTGTGGCCGCCGTCAACGGACACACCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS CAA 90 bp | CGCTGCTTCCTGGGCTTCACGCTGTTTTCCAGGGAAGGGAAGCTGTaGGTGTGTCCGTTGACGGCGGCCACAGACCCGTTCTGGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: RCFLGFTLFSREGKL*VCPLTAATDPFWWP Trigger: GGGCCACCAGAACGGGTCTGTGGCCGCCGTCAACGGACACACCAACAGCTTCCCTTCCCTGGAAAACAGCGTGAAGCCCAGGAAGCAGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS CAA 90 bp | GGCTTCACGCTGTTTTCCAGGGAAGGGAAGCTGTTGGTGTGTCCGTaGACGGCGGCCACAGACCCGTTCTGGTGGCCCTTCAGGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GFTLFSREGKLLVCP*TAATDPFWWPFRWS Trigger: AGACCACCTGAAGGGCCACCAGAACGGGTCTGTGGCCGCCGTCAACGGACACACCAACAGCTTCCCTTCCCTGGAAAACAGCGTGAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS CAA 72 bp | CTGTTTTCCAGGGAAGGGAAGCTGTTGGTGTGTCCGTaGACGGCGGCCACAGACCCGTTCTGGTGGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LFSREGKLLVCP*TAATDPFWWPF Trigger: GAAGGGCCACCAGAACGGGTCTGTGGCCGCCGTCAACGGACACACCAACAGCTTCCCTTCCCTGGAAAACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS TCA 72 bp | TGTTTTCCAGGGAAGGGAAGCTGTTGGTGTGTCCGTTaGCGGCGGCCACAGACCCGTTCTGGTGGCCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: CFPGKGSCWCVR*RRPQTRSGGPS Trigger: TGAAGGGCCACCAGAACGGGTCTGTGGCCGCCGTCAACGGACACACCAACAGCTTCCCTTCCCTGGAAAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS TCA 72 bp | AGGAGCATGGCCAGAAGACCCCGCAGGTCGTCTGGATaGTTGTCAGCACAAACTGGACCAGCTGCCCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: RSMARRPRRSSG*LSAQTGPAALE Trigger: CTCAAGGGCAGCTGGTCCAGTTTGTGCTGACAATCATCCAGACGACCTGCGGGGTCTTCTGGCCATGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS CCA 72 bp | AATCTGGAAGAACAGCCACCCGAGAGGGAAGGAGCATaGCCAGAAGACCCCGCAGGTCGTCTGGATGATTGT | + |
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Preference number: 6 (lower is better) Translates to: NLEEQPPEREGA*PEDPAGRLDDC Trigger: ACAATCATCCAGACGACCTGCGGGGTCTTCTGGCCATGCTCCTTCCCTCTCGGGTGGCTGTTCTTCCAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034904.14 |
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| CDS TCA 72 bp | TCACCAACTCATAGAACATGTAGAGAGACAGCAGGGTaGGTCCAAGGTTATACAACTGCAGGATGCCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: SPTHRTCRETAG*VQGYTTAGCLG Trigger: GCCGAGGCATCCTGCAGTTGTATAACCTTGGACTCACCCTGCTGTCTCTCTACATGTTCTATGAGTTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034904.14 ENSMUST00000133757.8 |
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| CDS GCA 72 bp | TTATACAACTGCAGGATGCCTCGGCAAGAGAACGGCTaGCGGTTCTTCATGTATTTTGGTCCCAGCCATACA | + |
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Preference number: 6 (lower is better) Translates to: LYNCRMPRQENG*RFFMYFGPSHT Trigger: TGTATGGCTGGGACCAAAATACATGAAGAACCGGCAGCCGTTCTCTTGCCGAGGCATCCTGCAGTTGTATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034904.14 ENSMUST00000133757.8 ENSMUST00000134072.2 |
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| CDS CCA 72 bp | ATCTTCATATCGGATTCTCCCGCGCTGCGTGTTCCCTaGCAGAAAAAGTTGTATTTGCCTTCCCACACACCT | + |
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Preference number: 6 (lower is better) Translates to: IFISDSPALRVP*QKKLYLPSHTP Trigger: AGGTGTGTGGGAAGGCAAATACAACTTTTTCTGCCAGGGAACACGCAGCGCGGGAGAATCCGATATGAAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034904.14 ENSMUST00000133757.8 |
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