Pregenerated sensors for ELOVL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032262Ensembl transcript IDs: ENSMUST00000034796.14, ENSMUST00000183614.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCCACAGTGATTTGTGCCGTAAATCGTGGTGGCCTATGGGTCACAAGACAGGATTTCTTGTTCTGTCTCTaGACAAGAAAATGTCAGGTA | + |
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Preference number: 2 (lower is better) Translates to: PTVICAVNRGGLWVTRQDFLFCL*TRKCQV Trigger: TACCTGACATTTTCTTGTTCAGAGACAGAACAAGAA...ATCCTGTCTTGTGACCCATAGGCCACCACGATTTACGGCACAAATCACTGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGTACAGAATGTTCGCAAAGATTTACACATCTCTAGTCATTACACACTGGGCTCCAAGGTCACATTaGGGTTGCTTTGGTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: SQYRMFAKIYTSLVITHWAPRSH*GCFGLD Trigger: GTCCAGACCAAAGCAACCCCAATGTGACCTTGGAGC...CCAGTGTGTAATGACTAGAGATGTGTAAATCTTTGCGAACATTCTGTACTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| 3UTR-3UTR TCA 90 bp | CGTCTCTTCTGCAGTCTTCCGGTCACCCGTTTCAATGACATGAGATACATAGTTAAAGTTTACTCAGTCTaGAGGGCAAAGACCCTATCT | + |
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Preference number: 2 (lower is better) Translates to: RLFCSLPVTRFNDMRYIVKVYSV*RAKTLS Trigger: AGATAGGGTCTTTGCCCTTCAGACTGAGTAAACTTT...AACTATGTATCTCATGTCATTGAAACGGGTGACCGGAAGACTGCAGAAGAGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| 3UTR-3UTR TCA 90 bp | TTCTGCAGTCTTCCGGTCACCCGTTTCAATGACATGAGATACATAGTTTGTAAAAGAGGTGGAAAGGTTTaGCCACAAGGGTCAGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: FCSLPVTRFNDMRYIVCKRGGKV*PQGSVN Trigger: ATTTACTGACCCTTGTGGTCAAACCTTTCCACCTCT...TTTACAAACTATGTATCTCATGTCATTGAAACGGGTGACCGGAAGACTGCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| 3UTR-3UTR CCA 90 bp | TGCAACATAGTCACAAGGGGACACAAGCATTGCTCAGAATTAGACACATTGAAAAATCGTGGTGGCCTATaGGTCACAAGACAGGATTTT | + |
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Preference number: 2 (lower is better) Translates to: CNIVTRGHKHCSELDTLKNRGGL*VTRQDF Trigger: AAAATCCTGTCTTGTGACCCATAGGCCACCACGATT...TTTCAATGTGTCTAATTCTGAGCAATGCTTGTGTCCCCTTGTGACTATGTTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| 3UTR-3UTR TCA 90 bp | TTCTGCAGTCTTCCGGTCACCCGTTTCAATGACATGAGATACATAGTTTGTAAATGTAGCGGCAAGCACTaGATTTTGCAATCATTAGCA | + |
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Preference number: 2 (lower is better) Translates to: FCSLPVTRFNDMRYIVCKCSGKH*ILQSLA Trigger: TGCTAATGATTGCAAAATTCAGTGCTTGCCGCTACA...TTTACAAACTATGTATCTCATGTCATTGAAACGGGTGACCGGAAGACTGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| 3UTR-3UTR TCA 90 bp | TTCTGCAGTCTTCCGGTCACCCGTTTCAATGACATGAGATACATAGTTTGTAAACTGAACTTTTTAAAATaGCACAGGAGTTTCCTCACT | + |
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Preference number: 2 (lower is better) Translates to: FCSLPVTRFNDMRYIVCKLNFLK*HRSFLT Trigger: AGTGAGGAAACTCCTGTGTCATTTTAAAAAGTTCAG...TTTACAAACTATGTATCTCATGTCATTGAAACGGGTGACCGGAAGACTGCAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| 3UTR TCA 72 bp | GATAGGCAAAATTTCCACCCATTGCACAGGCGGATGTaGACAGGAGGAGAGGCTCCAAGGTCACATTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: DRQNFHPLHRRM*TGGEAPRSHWG Trigger: ACCCCAATGTGACCTTGGAGCCTCTCCTCCTGTTCACATCCGCCTGTGCAATGGGTGGAAATTTTGCCTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| 3UTR-3UTR CAA 90 bp | CGTCTCTTCTGCAGTCTTCCGGTCACCCGTTTCAATGACATGAGATACATAGTTGACCCTCTGCTTCTGTaGCCCCTGAACTTTTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: RLFCSLPVTRFNDMRYIVDPLLL*PLNFLK Trigger: TTTTAAAAAGTTCAGGGGCAACAGAAGCAGAGGGTC...AACTATGTATCTCATGTCATTGAAACGGGTGACCGGAAGACTGCAGAAGAGACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| 3UTR-3UTR CAA 90 bp | CCCACAGTGATTTGTGCCGTAAATCGTGGTGGCCTATGGGTCACAAGACAGGATTCTGGGTACCATATATaGAAAAGTTTACTCAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PTVICAVNRGGLWVTRQDSGYHI*KSLLSL Trigger: CAGACTGAGTAAACTTTTCAATATATGGTACCCAGA...ATCCTGTCTTGTGACCCATAGGCCACCACGATTTACGGCACAAATCACTGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| 3UTR-3UTR CAA 90 bp | AGCCAGTACAGAATGTTCGCAAAGATTTACACATCTCTAGTCATTACACACTGGGTTTCCCACAGTGATTaGTGCCGTAAATCGTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SQYRMFAKIYTSLVITHWVSHSD*CRKSWW Trigger: CCACCACGATTTACGGCACAAATCACTGTGGGAAAC...CCAGTGTGTAATGACTAGAGATGTGTAAATCTTTGCGAACATTCTGTACTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| 3UTR GCA 72 bp | AATAGAGAGAGATATATTGTTTCCCACAGTGATTTGTaGCGTAAATCGTGGTGGCCTATGGGTCACAAGACA | + |
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Preference number: 3 (lower is better) Translates to: NRERYIVSHSDL*RKSWWPMGHKT Trigger: TGTCTTGTGACCCATAGGCCACCACGATTTACGGCACAAATCACTGTGGGAAACAATATATCTCTCTCTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| 3UTR TCA 72 bp | TTCATGCTAATTTTTGTCACATTTCCTCTTTCCATATaGTCTCTCTGTGACGCCCATAACAAATTAATCTGT | + |
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Preference number: 3 (lower is better) Translates to: FMLIFVTFPLSI*SLCDAHNKLIC Trigger: ACAGATTAATTTGTTATGGGCGTCACAGAGAGATCATATGGAAAGAGGAAATGTGACAAAAATTAGCATGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR GCA 90 bp | CGTCTCTTCTGCAGTCTTCCGGTCACCCGTTTCAATGACATGAGATACATAGTTGCGATCAGAGCCCAGTaGATCCACTTGGGGAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: RLFCSLPVTRFNDMRYIVAIRAQ*IHLGKG Trigger: CCCCTTCCCCAAGTGGATGCACTGGGCTCTGATCGC...AACTATGTATCTCATGTCATTGAAACGGGTGACCGGAAGACTGCAGAAGAGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR CCA 90 bp | TTGAAAAGTTTACTCAGTCTGAAGGGCAAAGACCCTATCTGCCTTTCTCCCCAGCCCAGTGCATCCACTTaGGGAAGGGGCAGTCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LKSLLSLKGKDPICLSPQPSAST*GRGSRC Trigger: ACACCGACTGCCCCTTCCCCAAGTGGATGCACTGGG...CTGGGGAGAAAGGCAGATAGGGTCTTTGCCCTTCAGACTGAGTAAACTTTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR CCA 90 bp | CCCACAGTGATTTGTGCCGTAAATCGTGGTGGCCTATGGGTCACAAGACAGGATCACGTTTATCTGCAATaGTCCAGGTCCAGCGATAGA | + |
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Preference number: 4 (lower is better) Translates to: PTVICAVNRGGLWVTRQDHVYLQ*SRSSDR Trigger: TCTATCGCTGGACCTGGACCATTGCAGATAAACGTG...ATCCTGTCTTGTGACCCATAGGCCACCACGATTTACGGCACAAATCACTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR CCA 90 bp | TTGAAAAGTTTACTCAGTCTGAAGGGCAAAGACCCTATCTGCCTTTCTCCCCAGGCTTATCGTTGGCCATaGAGACTGCATCAGCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LKSLLSLKGKDPICLSPQAYRWP*RLHQRP Trigger: TGGCCGCTGATGCAGTCTCCATGGCCAACGATAAGC...CTGGGGAGAAAGGCAGATAGGGTCTTTGCCCTTCAGACTGAGTAAACTTTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR CCA 90 bp | TTGAAAAGTTTACTCAGTCTGAAGGGCAAAGACCCTATCTGCCTTTCTCCCCAGCACCAAAGATATTTCTaGATCCAGGGGCCGAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKSLLSLKGKDPICLSPQHQRYF*IQGPNA Trigger: TGCGTTCGGCCCCTGGATCCAGAAATATCTTTGGTG...CTGGGGAGAAAGGCAGATAGGGTCTTTGCCCTTCAGACTGAGTAAACTTTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR CCA 90 bp | TTCTGCAGTCTTCCGGTCACCCGTTTCAATGACATGAGATACATAGTTTGTAAAGGACCAGCTGCAGCATaGTCAGGTATCGCTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: FCSLPVTRFNDMRYIVCKGPAAA*SGIAST Trigger: GGTGGAAGCGATACCTGACCATGCTGCAGCTGGTCC...TTTACAAACTATGTATCTCATGTCATTGAAACGGGTGACCGGAAGACTGCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR TCA 90 bp | TTCTGCAGTCTTCCGGTCACCCGTTTCAATGACATGAGATACATAGTTTGTAAACTCCAGCCACCCACTTaGTTCCAATCCACCACAGAG | + |
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Preference number: 4 (lower is better) Translates to: FCSLPVTRFNDMRYIVCKLQPPT*FQSTTE Trigger: CTCTGTGGTGGATTGGAATCAAGTGGGTGGCTGGAG...TTTACAAACTATGTATCTCATGTCATTGAAACGGGTGACCGGAAGACTGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR CCA 90 bp | TTGAAAAGTTTACTCAGTCTGAAGGGCAAAGACCCTATCTGCCTTTCTCCCCAGGCTTATGCTTATCGTTaGCCATGGAGACTGCATCAG | + |
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Preference number: 4 (lower is better) Translates to: LKSLLSLKGKDPICLSPQAYAYR*PWRLHQ Trigger: CTGATGCAGTCTCCATGGCCAACGATAAGCATAAGC...CTGGGGAGAAAGGCAGATAGGGTCTTTGCCCTTCAGACTGAGTAAACTTTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| 3UTR CAA 72 bp | TGCTGCTGTTCCCGTAATGTTGGTGACTGCATGCCTTaGAGGGGGAATGGAATCTCAACGCACAATAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: CCCSRNVGDCMP*RGNGISTHNKY Trigger: GTATTTATTGTGCGTTGAGATTCCATTCCCCCTCAAAGGCATGCAGTCACCAACATTACGGGAACAGCAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR TCA 90 bp | TTCTGCAGTCTTCCGGTCACCCGTTTCAATGACATGAGATACATAGTTTGTAAACAATCCACCACAGAGTaGACATGGTGCAGTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: FCSLPVTRFNDMRYIVCKQSTTE*TWCSGG Trigger: ACCACCACTGCACCATGTTCACTCTGTGGTGGATTG...TTTACAAACTATGTATCTCATGTCATTGAAACGGGTGACCGGAAGACTGCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| 3UTR CAA 72 bp | AAAAATAGAGAGAGATATATTGTTTCCCACAGTGATTaGTGCCGTAAATCGTGGTGGCCTATGGGTCACAAG | + |
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Preference number: 4 (lower is better) Translates to: KNRERYIVSHSD*CRKSWWPMGHK Trigger: CTTGTGACCCATAGGCCACCACGATTTACGGCACAAATCACTGTGGGAAACAATATATCTCTCTCTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS TCA 90 bp | CAGCTGCAATGGTCCAGGTCCAGCGATAGAACTCCACGGTGTCGTTaGATGCCGTGGACATCGCGTTCAGGACGCTGCCGGGCTCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: QLQWSRSSDRTPRCR*MPWTSRSGRCRALS Trigger: ACTCAGAGCCCGGCAGCGTCCTGAACGCGATGTCCACGGCATTCAACGACACCGTGGAGTTCTATCGCTGGACCTGGACCATTGCAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183614.2 |
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| CDS GCA 90 bp | CCAGTGCATCCACTTGGGGAAGGGGCAGTCGGTGTAGAGAGACAGTaGTGTGTGTCCGATGGTCACGTGGAACTGGACCAGCTGCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: PVHPLGEGAVGVERQ*CVSDGHVELDQLQH Trigger: ATGCTGCAGCTGGTCCAGTTCCACGTGACCATCGGACACACAGCACTGTCTCTCTACACCGACTGCCCCTTCCCCAAGTGGATGCACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034796.14 ENSMUST00000183614.2 |
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| CDS CCA 90 bp | TGGGGAAGGGGCAGTCGGTGTAGAGAGACAGTGCTGTGTGTCCGATaGTCACGTGGAACTGGACCAGCTGCAGCATGGTCAGGTATCGCT | + |
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Preference number: 5 (lower is better) Translates to: WGRGSRCRETVLCVR*SRGTGPAAAWSGIA Trigger: AGCGATACCTGACCATGCTGCAGCTGGTCCAGTTCCACGTGACCATCGGACACACAGCACTGTCTCTCTACACCGACTGCCCCTTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034796.14 ENSMUST00000183614.2 |
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| CDS TCA 90 bp | TATCTGCAATGGTCCAGGTCCAGCGATAGAACTCCACGGTGTCGTTaGATGCCGTGGACATCGCGTTCAGGACGCTGCCGGGCTCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: YLQWSRSSDRTPRCR*MPWTSRSGRCRALS Trigger: ACTCAGAGCCCGGCAGCGTCCTGAACGCGATGTCCACGGCATTCAACGACACCGTGGAGTTCTATCGCTGGACCTGGACCATTGCAGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS CCA 90 bp | GTGCTGTGTGTCCGATGGTCACGTGGAACTGGACCAGCTGCAGCATaGTCAGGTATCGCTTCCACCAAAGATATTTCTGGATCCAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: VLCVRWSRGTGPAAA*SGIASTKDISGSRG Trigger: GCCCCTGGATCCAGAAATATCTTTGGTGGAAGCGATACCTGACCATGCTGCAGCTGGTCCAGTTCCACGTGACCATCGGACACACAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034796.14 ENSMUST00000183614.2 |
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| CDS GCA 90 bp | TCCACTTTGGACCCAGCCACACGAACAGGAGATAGAGCGTGCTTATaGTTATCGTTGGCCATGGAGACTGCATCAGCGGCCAGTCTGCTA | + |
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Preference number: 5 (lower is better) Translates to: STLDPATRTGDRACL*LSLAMETASAASLL Trigger: TAGCAGACTGGCCGCTGATGCAGTCTCCATGGCCAACGATAAGCATAAGCACGCTCTATCTCCTGTTCGTGTGGCTGGGTCCAAAGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR CAA 90 bp | TTGAAAAGTTTACTCAGTCTGAAGGGCAAAGACCCTATCTGCCTTTCTCCCCAGGCCCAGTGCATCCACTaGGGGAAGGGGCAGTCGGTG | + |
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Preference number: 5 (lower is better) Translates to: LKSLLSLKGKDPICLSPQAQCIH*GKGQSV Trigger: CACCGACTGCCCCTTCCCCAAGTGGATGCACTGGGC...CTGGGGAGAAAGGCAGATAGGGTCTTTGCCCTTCAGACTGAGTAAACTTTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS GCA 90 bp | CTTTCATCCACTTTGGACCCAGCCACACGAACAGGAGATAGAGCGTaGTTATGCTTATCGTTGGCCATGGAGACTGCATCAGCGGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: LSSTLDPATRTGDRA*LCLSLAMETASAAS Trigger: ACTGGCCGCTGATGCAGTCTCCATGGCCAACGATAAGCATAAGCACGCTCTATCTCCTGTTCGTGTGGCTGGGTCCAAAGTGGATGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS CCA 90 bp | ACCCAGCCACACGAACAGGAGATAGAGCGTGCTTATGCTTATCGTTaGCCATGGAGACTGCATCAGCGGCCAGTCTGCTACACGTTTATC | + |
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Preference number: 5 (lower is better) Translates to: TQPHEQEIERAYAYR*PWRLHQRPVCYTFI Trigger: GATAAACGTGTAGCAGACTGGCCGCTGATGCAGTCTCCATGGCCAACGATAAGCATAAGCACGCTCTATCTCCTGTTCGTGTGGCTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR CAA 90 bp | TTGAAAAGTTTACTCAGTCTGAAGGGCAAAGACCCTATCTGCCTTTCTCCCCAGGGCCCCGAAAAACGCTaGGCCTCCAGCCACCCACTT | + |
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Preference number: 5 (lower is better) Translates to: LKSLLSLKGKDPICLSPQGPEKR*ASSHPL Trigger: AAGTGGGTGGCTGGAGGCCAAGCGTTTTTCGGGGCC...CTGGGGAGAAAGGCAGATAGGGTCTTTGCCCTTCAGACTGAGTAAACTTTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS CCA 90 bp | ATGATCACGTGGATGAAAGAGTTCATCTGGGCCCCGAAAAACGCTTaGCCTCCAGCCACCCACTTGATTCCAATCCACCACAGAGTGAAC | + |
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Preference number: 5 (lower is better) Translates to: MITWMKEFIWAPKNA*PPATHLIPIHHRVN Trigger: GTTCACTCTGTGGTGGATTGGAATCAAGTGGGTGGCTGGAGGCCAAGCGTTTTTCGGGGCCCAGATGAACTCTTTCATCCACGTGATCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034796.14 ENSMUST00000183614.2 |
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| CDS CCA 90 bp | CCACACGAACAGGAGATAGAGCGTGCTTATGCTTATCGTTGGCCATaGAGACTGCATCAGCGGCCAGTCTGCTACACGTTTATCTGCAAT | + |
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Preference number: 5 (lower is better) Translates to: PHEQEIERAYAYRWP*RLHQRPVCYTFICN Trigger: ATTGCAGATAAACGTGTAGCAGACTGGCCGCTGATGCAGTCTCCATGGCCAACGATAAGCATAAGCACGCTCTATCTCCTGTTCGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR CAA 90 bp | TTGAAAAGTTTACTCAGTCTGAAGGGCAAAGACCCTATCTGCCTTTCTCCCCAGAACTCCACGGTGTCGTaGAATGCCGTGGACATCGCG | + |
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Preference number: 5 (lower is better) Translates to: LKSLLSLKGKDPICLSPQNSTVS*NAVDIA Trigger: CGCGATGTCCACGGCATTCAACGACACCGTGGAGTT...CTGGGGAGAAAGGCAGATAGGGTCTTTGCCCTTCAGACTGAGTAAACTTTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR CAA 90 bp | TTGAAAAGTTTACTCAGTCTGAAGGGCAAAGACCCTATCTGCCTTTCTCCCCAGCCTCCAGCCACCCACTaGATTCCAATCCACCACAGA | + |
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Preference number: 5 (lower is better) Translates to: LKSLLSLKGKDPICLSPQPPATH*IPIHHR Trigger: TCTGTGGTGGATTGGAATCAAGTGGGTGGCTGGAGG...CTGGGGAGAAAGGCAGATAGGGTCTTTGCCCTTCAGACTGAGTAAACTTTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR CAA 90 bp | CGTCTCTTCTGCAGTCTTCCGGTCACCCGTTTCAATGACATGAGATACATAGTTGGTCTTTCATCCACTTaGGACCCAGCCACACGAACA | + |
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Preference number: 5 (lower is better) Translates to: RLFCSLPVTRFNDMRYIVGLSST*DPATRT Trigger: TGTTCGTGTGGCTGGGTCCAAAGTGGATGAAAGACC...AACTATGTATCTCATGTCATTGAAACGGGTGACCGGAAGACTGCAGAAGAGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR CAA 90 bp | CCCACAGTGATTTGTGCCGTAAATCGTGGTGGCCTATGGGTCACAAGACAGGATAGGAAGGAGACTTGGTaGTTTTTCTTCCTCAGGATA | + |
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Preference number: 5 (lower is better) Translates to: PTVICAVNRGGLWVTRQDRKETW*FFFLRI Trigger: TATCCTGAGGAAGAAAAACAACCAAGTCTCCTTCCT...ATCCTGTCTTGTGACCCATAGGCCACCACGATTTACGGCACAAATCACTGTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS-3UTR CAA 90 bp | TTGAAAAGTTTACTCAGTCTGAAGGGCAAAGACCCTATCTGCCTTTCTCCCCAGTGCTTATGCTTATCGTaGGCCATGGAGACTGCATCA | + |
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Preference number: 5 (lower is better) Translates to: LKSLLSLKGKDPICLSPQCLCLS*AMETAS Trigger: TGATGCAGTCTCCATGGCCAACGATAAGCATAAGCA...CTGGGGAGAAAGGCAGATAGGGTCTTTGCCCTTCAGACTGAGTAAACTTTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS GCA 72 bp | CCAGGTCCAGCGATAGAACTCCACGGTGTCGTTGAATaGCGTGGACATCGCGTTCAGGACGCTGCCGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: PGPAIELHGVVE*RGHRVQDAAGL Trigger: GAGCCCGGCAGCGTCCTGAACGCGATGTCCACGGCATTCAACGACACCGTGGAGTTCTATCGCTGGACCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034796.14 ENSMUST00000183614.2 |
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| CDS TCA 72 bp | TGGTCCAGGTCCAGCGATAGAACTCCACGGTGTCGTTaGATGCCGTGGACATCGCGTTCAGGACGCTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: WSRSSDRTPRCR*MPWTSRSGRCR Trigger: CCGGCAGCGTCCTGAACGCGATGTCCACGGCATTCAACGACACCGTGGAGTTCTATCGCTGGACCTGGACCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034796.14 ENSMUST00000183614.2 |
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| CDS GCA 72 bp | CCACTTGGGGAAGGGGCAGTCGGTGTAGAGAGACAGTaGTGTGTGTCCGATGGTCACGTGGAACTGGACCAG | + |
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Preference number: 6 (lower is better) Translates to: PLGEGAVGVERQ*CVSDGHVELDQ Trigger: CTGGTCCAGTTCCACGTGACCATCGGACACACAGCACTGTCTCTCTACACCGACTGCCCCTTCCCCAAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034796.14 ENSMUST00000183614.2 |
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| CDS CCA 72 bp | GGCAGTCGGTGTAGAGAGACAGTGCTGTGTGTCCGATaGTCACGTGGAACTGGACCAGCTGCAGCATGGTCA | + |
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Preference number: 6 (lower is better) Translates to: GSRCRETVLCVR*SRGTGPAAAWS Trigger: TGACCATGCTGCAGCTGGTCCAGTTCCACGTGACCATCGGACACACAGCACTGTCTCTCTACACCGACTGCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034796.14 ENSMUST00000183614.2 |
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| CDS GCA 72 bp | GACCCAGCCACACGAACAGGAGATAGAGCGTGCTTATaGTTATCGTTGGCCATGGAGACTGCATCAGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: DPATRTGDRACL*LSLAMETASAA Trigger: GGCCGCTGATGCAGTCTCCATGGCCAACGATAAGCATAAGCACGCTCTATCTCCTGTTCGTGTGGCTGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS CAA 72 bp | TGGGCCCCGAAAAACGCTTGGCCTCCAGCCACCCACTaGATTCCAATCCACCACAGAGTGAACATGGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: WAPKNAWPPATH*IPIHHRVNMVQ Trigger: CTGCACCATGTTCACTCTGTGGTGGATTGGAATCAAGTGGGTGGCTGGAGGCCAAGCGTTTTTCGGGGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034796.14 ENSMUST00000183614.2 |
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| CDS CAA 90 bp | GAGTTCATCTGGGCCCCGAAAAACGCTTGGCCTCCAGCCACCCACTaGATTCCAATCCACCACAGAGTGAACATGGTGCAGTGGTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: EFIWAPKNAWPPATH*IPIHHRVNMVQWWY Trigger: GTACCACCACTGCACCATGTTCACTCTGTGGTGGATTGGAATCAAGTGGGTGGCTGGAGGCCAAGCGTTTTTCGGGGCCCAGATGAACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034796.14 ENSMUST00000183614.2 |
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| CDS GCA 72 bp | TATCGTTGGCCATGGAGACTGCATCAGCGGCCAGTCTaGTACACGTTTATCTGCAATGGTCCAGGTCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: YRWPWRLHQRPV*YTFICNGPGPA Trigger: CGCTGGACCTGGACCATTGCAGATAAACGTGTAGCAGACTGGCCGCTGATGCAGTCTCCATGGCCAACGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS CCA 72 bp | CACGAACAGGAGATAGAGCGTGCTTATGCTTATCGTTaGCCATGGAGACTGCATCAGCGGCCAGTCTGCTAC | + |
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Preference number: 6 (lower is better) Translates to: HEQEIERAYAYR*PWRLHQRPVCY Trigger: GTAGCAGACTGGCCGCTGATGCAGTCTCCATGGCCAACGATAAGCATAAGCACGCTCTATCTCCTGTTCGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS CCA 72 bp | TGGATGAAAGAGTTCATCTGGGCCCCGAAAAACGCTTaGCCTCCAGCCACCCACTTGATTCCAATCCACCAC | + |
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Preference number: 6 (lower is better) Translates to: WMKEFIWAPKNA*PPATHLIPIHH Trigger: GTGGTGGATTGGAATCAAGTGGGTGGCTGGAGGCCAAGCGTTTTTCGGGGCCCAGATGAACTCTTTCATCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034796.14 ENSMUST00000183614.2 |
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| CDS CAA 72 bp | GTGGATGAAAGAGTTCATCTGGGCCCCGAAAAACGCTaGGCCTCCAGCCACCCACTTGATTCCAATCCACCA | + |
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Preference number: 6 (lower is better) Translates to: VDERVHLGPEKR*ASSHPLDSNPP Trigger: TGGTGGATTGGAATCAAGTGGGTGGCTGGAGGCCAAGCGTTTTTCGGGGCCCAGATGAACTCTTTCATCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034796.14 ENSMUST00000183614.2 |
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| CDS CAA 90 bp | GACCCAGCCACACGAACAGGAGATAGAGCGTGCTTATGCTTATCGTaGGCCATGGAGACTGCATCAGCGGCCAGTCTGCTACACGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: DPATRTGDRACLCLS*AMETASAASLLHVY Trigger: ATAAACGTGTAGCAGACTGGCCGCTGATGCAGTCTCCATGGCCAACGATAAGCATAAGCACGCTCTATCTCCTGTTCGTGTGGCTGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS CCA 72 bp | CAGGAGATAGAGCGTGCTTATGCTTATCGTTGGCCATaGAGACTGCATCAGCGGCCAGTCTGCTACACGTTT | + |
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Preference number: 6 (lower is better) Translates to: QEIERAYAYRWP*RLHQRPVCYTF Trigger: AAACGTGTAGCAGACTGGCCGCTGATGCAGTCTCCATGGCCAACGATAAGCATAAGCACGCTCTATCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS CCA 72 bp | GTCCGATGGTCACGTGGAACTGGACCAGCTGCAGCATaGTCAGGTATCGCTTCCACCAAAGATATTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VRWSRGTGPAAA*SGIASTKDISG Trigger: TCCAGAAATATCTTTGGTGGAAGCGATACCTGACCATGCTGCAGCTGGTCCAGTTCCACGTGACCATCGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034796.14 ENSMUST00000183614.2 |
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| CDS CAA 72 bp | ACACGAACAGGAGATAGAGCGTGCTTATGCTTATCGTaGGCCATGGAGACTGCATCAGCGGCCAGTCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: TRTGDRACLCLS*AMETASAASLL Trigger: TAGCAGACTGGCCGCTGATGCAGTCTCCATGGCCAACGATAAGCATAAGCACGCTCTATCTCCTGTTCGTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS CAA 90 bp | CATGATCACGTGGATGAAAGAGTTCATCTGGGCCCCGAAAAACGCTaGGCCTCCAGCCACCCACTTGATTCCAATCCACCACAGAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: HDHVDERVHLGPEKR*ASSHPLDSNPPQSE Trigger: TTCACTCTGTGGTGGATTGGAATCAAGTGGGTGGCTGGAGGCCAAGCGTTTTTCGGGGCCCAGATGAACTCTTTCATCCACGTGATCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034796.14 ENSMUST00000183614.2 |
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| CDS GCA 72 bp | ACTTTGGACCCAGCCACACGAACAGGAGATAGAGCGTaGTTATGCTTATCGTTGGCCATGGAGACTGCATCA | + |
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Preference number: 6 (lower is better) Translates to: TLDPATRTGDRA*LCLSLAMETAS Trigger: TGATGCAGTCTCCATGGCCAACGATAAGCATAAGCACGCTCTATCTCCTGTTCGTGTGGCTGGGTCCAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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| CDS CAA 72 bp | TCGATGAGATACCATTCGTGGCCGTCTTTCCGGTTTTaGACTGCTTCGGCTCATTGTATGTCCGAGTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SMRYHSWPSFRF*TASAHCMSECR Trigger: TCTACACTCGGACATACAATGAGCCGAAGCAGTCAAAAACCGGAAAGACGGCCACGAATGGTATCTCATCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034796.14 |
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