Pregenerated sensors for ELOVL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038754Ensembl transcript IDs: ENSMUST00000043739.6, ENSMUST00000237098.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCTTCCCATTGTCCAAAAGGACAGCTGGATGTACAGGAACCGAGTaGGCGTCCAGGCTTCTAAGGTTGCCGTCTCACTCCTTTCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: SFPLSKRTAGCTGTE*ASRLLRLPSHSFPP Trigger: TGGAGGAAAGGAGTGAGACGGCAACCTTAGAAGCCTGGACGCTCACTCGGTTCCTGTACATCCAGCTGTCCTTTTGGACAATGGGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237098.2 |
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| 3UTR TCA 90 bp | CAGAAACATCAAAGTACCAAACCACACACCCCCTATCCCCAAGGGTaGCATTTCTTGGTTGTCATAGCTTCCTGCAACTTTGAGGGTACA | + |
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Preference number: 1 (lower is better) Translates to: QKHQSTKPHTPYPQG*HFLVVIASCNFEGT Trigger: TGTACCCTCAAAGTTGCAGGAAGCTATGACAACCAAGAAATGTCACCCTTGGGGATAGGGGGTGTGTGGTTTGGTACTTTGATGTTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| 3UTR CCA 90 bp | GCCTATGATTTTAGGACTTGTTTCTCACTGTTCCTTTCAGAGGCTTaGGTCTCTAACAGCAATAAACTTCTAGTCTGTAAAAGACATTTA | + |
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Preference number: 1 (lower is better) Translates to: AYDFRTCFSLFLSEA*VSNSNKLLVCKRHL Trigger: TAAATGTCTTTTACAGACTAGAAGTTTATTGCTGTTAGAGACCCAAGCCTCTGAAAGGAACAGTGAGAAACAAGTCCTAAAATCATAGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237098.2 |
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| 3UTR-3UTR TCA 90 bp | GGTACATATCCCATGGGGGAAACCATACAGGGAGGTACCCTAATCATTCTCCCACCACGGAGGAACGGCTaGGGCTCCATCTTTCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: GTYPMGETIQGGTLIILPPRRNG*GSIFLS Trigger: GGAAAGAAAGATGGAGCCTCAGCCGTTCCTCCGTGG...TGGGAGAATGATTAGGGTACCTCCCTGTATGGTTTCCCCCATGGGATATGTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| 3UTR CCA 72 bp | ACAGGGATCGTTCTCTGCTGGTGCTGCGACGCCACCTaGTGGTCTCTGGGAGGACAGCCGGTAGGTCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: TGIVLCWCCDAT*WSLGGQPVGLV Trigger: GACCAGACCTACCGGCTGTCCTCCCAGAGACCACCAGGTGGCGTCGCAGCACCAGCAGAGAACGATCCCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237098.2 |
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| 3UTR TCA 72 bp | TTGTCCAAAAGGACAGCTGGATGTACAGGAACCGAGTaGGCGTCCAGGCTTCTAAGGTTGCCGTCTCACTCC | + |
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Preference number: 3 (lower is better) Translates to: LSKRTAGCTGTE*ASRLLRLPSHS Trigger: GGAGTGAGACGGCAACCTTAGAAGCCTGGACGCTCACTCGGTTCCTGTACATCCAGCTGTCCTTTTGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237098.2 |
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| 3UTR GCA 72 bp | GTCTGGTCACCCGTGCTTCCACGCAGCGATCTCTTCTaGAGTTTAGCCTATGATTTTAGGACTTGTTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: VWSPVLPRSDLF*SLAYDFRTCFS Trigger: TGAGAAACAAGTCCTAAAATCATAGGCTAAACTGCAGAAGAGATCGCTGCGTGGAAGCACGGGTGACCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237098.2 |
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| 3UTR TCA 72 bp | CAAAGTACCAAACCACACACCCCCTATCCCCAAGGGTaGCATTTCTTGGTTGTCATAGCTTCCTGCAACTTT | + |
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Preference number: 3 (lower is better) Translates to: QSTKPHTPYPQG*HFLVVIASCNF Trigger: AAAGTTGCAGGAAGCTATGACAACCAAGAAATGTCACCCTTGGGGATAGGGGGTGTGTGGTTTGGTACTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CCA 90 bp | TGGTGCTGCGACGCCACCTGGTGGTCTCTGGGAGGACAGCCGGTAGGTCTGGTCAGTAGCACTGTGCTGTaGTGGTACCAGTGGACAAAG | + |
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Preference number: 4 (lower is better) Translates to: WCCDATWWSLGGQPVGLVSSTVL*WYQWTK Trigger: CTTTGTCCACTGGTACCACCACAGCACAGTGCTACT...GACCAGACCTACCGGCTGTCCTCCCAGAGACCACCAGGTGGCGTCGCAGCACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237098.2 |
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| CDS-3UTR GCA 90 bp | TGGTGCTGCGACGCCACCTGGTGGTCTCTGGGAGGACAGCCGGTAGGTCTGGTCCAGGATACTGAATATTaGCAGGAAGAAGGACCAGAG | + |
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Preference number: 4 (lower is better) Translates to: WCCDATWWSLGGQPVGLVQDTEY*QEEGPE Trigger: CTCTGGTCCTTCTTCCTGGCAATATTCAGTATCCTG...GACCAGACCTACCGGCTGTCCTCCCAGAGACCACCAGGTGGCGTCGCAGCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237098.2 |
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| CDS-3UTR TCA 90 bp | AGTCAGTCCACTCTCCCCTCCCCTCCAAGTCCACAAATCCTCAAGATCATGTTGGAGGCCTCTGCAAGCTaGAGCTCTTCCGCGTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: SQSTLPSPPSPQILKIMLEASAS*SSSAFS Trigger: TGAGAACGCGGAAGAGCTTCAGCTTGCAGAGGCCTC...CAACATGATCTTGAGGATTTGTGGACTTGGAGGGGAGGGGAGAGTGGACTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CCA 90 bp | CCTACCACAGAGTCAGTCCACTCTCCCCTCCCCTCCAAGTCCACAAATCCTCAATGTTCCGTTGTTGTGTaGCATCCTTTCTCCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PTTESVHSPLPSKSTNPQCSVVV*HPFSCL Trigger: GAGGCAGGAGAAAGGATGCCACACAACAACGGAACA...TTGAGGATTTGTGGACTTGGAGGGGAGGGGAGAGTGGACTGACTCTGTGGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR TCA 90 bp | AGTCAGTCCACTCTCCCCTCCCCTCCAAGTCCACAAATCCTCAAGATCATGTTGACCAGTGGACAAAGATaGGTGGACGCTTACGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SQSTLPSPPSPQILKIMLTSGQR*VDAYAG Trigger: TCCTGCGTAAGCGTCCACTCATCTTTGTCCACTGGT...CAACATGATCTTGAGGATTTGTGGACTTGGAGGGGAGGGGAGAGTGGACTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CCA 90 bp | CCTACCACAGAGTCAGTCCACTCTCCCCTCCCCTCCAAGTCCACAAATCCTCAAGTGGACAAAGATGAGTaGACGCTTACGCAGGATGAT | + |
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Preference number: 4 (lower is better) Translates to: PTTESVHSPLPSKSTNPQVDKDE*TLTQDD Trigger: ATCATCCTGCGTAAGCGTCCACTCATCTTTGTCCAC...TTGAGGATTTGTGGACTTGGAGGGGAGGGGAGAGTGGACTGACTCTGTGGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR TCA 90 bp | CATTTCTTGGTTGTCATAGCTTCCTGCAACTTTGAGGGTACATATCCCATGGGGGAGGCCTCTGCAAGCTaGAGCTCTTCCGCGTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: HFLVVIASCNFEGTYPMGEASAS*SSSAFS Trigger: TGAGAACGCGGAAGAGCTTCAGCTTGCAGAGGCCTC...CCCCATGGGATATGTACCCTCAAAGTTGCAGGAAGCTATGACAACCAAGAAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR TCA 90 bp | CCACAGAGTCAGTCCACTCTCCCCTCCCCTCCAAGTCCACAAATCCTCAAGATCTGTATCCAAAGCTTGTaGACAGTAGCACTGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PQSQSTLPSPPSPQILKICIQSL*TVALCC Trigger: ACAGCACAGTGCTACTGTTCACAAGCTTTGGATACA...GATCTTGAGGATTTGTGGACTTGGAGGGGAGGGGAGAGTGGACTGACTCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CCA 90 bp | ACAGAGTCAGTCCACTCTCCCCTCCCCTCCAAGTCCACAAATCCTCAAGATCATAGCACTGTGCTGTGGTaGTACCAGTGGACAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: TESVHSPLPSKSTNPQDHSTVLW*YQWTKM Trigger: CATCTTTGTCCACTGGTACCACCACAGCACAGTGCT...ATGATCTTGAGGATTTGTGGACTTGGAGGGGAGGGGAGAGTGGACTGACTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CCA 90 bp | ACAGAGTCAGTCCACTCTCCCCTCCCCTCCAAGTCCACAAATCCTCAAGATCATAGTAGCACTGTGCTGTaGTGGTACCAGTGGACAAAG | + |
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Preference number: 4 (lower is better) Translates to: TESVHSPLPSKSTNPQDHSSTVL*WYQWTK Trigger: CTTTGTCCACTGGTACCACCACAGCACAGTGCTACT...ATGATCTTGAGGATTTGTGGACTTGGAGGGGAGGGGAGAGTGGACTGACTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CCA 90 bp | CCTACCACAGAGTCAGTCCACTCTCCCCTCCCCTCCAAGTCCACAAATCCTCAAGTGTACATGACAGAATaGACGCCAAAGTTCATGGTC | + |
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Preference number: 4 (lower is better) Translates to: PTTESVHSPLPSKSTNPQVYMTE*TPKFMV Trigger: GACCATGAACTTTGGCGTCCATTCTGTCATGTACAC...TTGAGGATTTGTGGACTTGGAGGGGAGGGGAGAGTGGACTGACTCTGTGGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR GCA 90 bp | CAGTCCACTCTCCCCTCCCCTCCAAGTCCACAAATCCTCAAGATCATGTTGACCCAGGATACTGAATATTaGCAGGAAGAAGGACCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QSTLPSPPSPQILKIMLTQDTEY*QEEGPE Trigger: CTCTGGTCCTTCTTCCTGGCAATATTCAGTATCCTG...GGTCAACATGATCTTGAGGATTTGTGGACTTGGAGGGGAGGGGAGAGTGGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CCA 90 bp | ACATATCCCATGGGGGAAACCATACAGGGAGGTACCCTAATCATTCTCCCATACCTGTGGTGGTACCAGTaGACAAAGATGAGTGGACGC | + |
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Preference number: 4 (lower is better) Translates to: TYPMGETIQGGTLIILPYLWWYQ*TKMSGR Trigger: GCGTCCACTCATCTTTGTCCACTGGTACCACCACAG...GTATGGGAGAATGATTAGGGTACCTCCCTGTATGGTTTCCCCCATGGGATATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR TCA 90 bp | AGTCAGTCCACTCTCCCCTCCCCTCCAAGTCCACAAATCCTCAAGATCATGTTGGTTCAACAACCTTGCTaGGAAGAAAGAGAAAGGACC | + |
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Preference number: 4 (lower is better) Translates to: SQSTLPSPPSPQILKIMLVQQPC*EERERT Trigger: GGTCCTTTCTCTTTCTTCTCAGCAAGGTTGTTGAAC...CAACATGATCTTGAGGATTTGTGGACTTGGAGGGGAGGGGAGAGTGGACTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR TCA 90 bp | GAAACATCAAAGTACCAAACCACACACCCCCTATCCCCAAGGGTGACATTTCTTCAAAGTTCATGGTCATaGACCAGCCACCCGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: ETSKYQTTHPLSPRVTFLQSSWS*TSHPKA Trigger: TGCCTTCGGGTGGCTGGTTCATGACCATGAACTTTG...AAGAAATGTCACCCTTGGGGATAGGGGGTGTGTGGTTTGGTACTTTGATGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CCA 90 bp | TACATATCCCATGGGGGAAACCATACAGGGAGGTACCCTAATCATTCTCCCATACTGTGGTGGTACCAGTaGACAAAGATGAGTGGACGC | + |
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Preference number: 4 (lower is better) Translates to: YISHGGNHTGRYPNHSPILWWYQ*TKMSGR Trigger: GCGTCCACTCATCTTTGTCCACTGGTACCACCACAG...TATGGGAGAATGATTAGGGTACCTCCCTGTATGGTTTCCCCCATGGGATATGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR GCA 90 bp | CATTTCTTGGTTGTCATAGCTTCCTGCAACTTTGAGGGTACATATCCCATGGGGACCATCTGCAGAATCTaGAGGCTGGTGATGACCATG | + |
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Preference number: 4 (lower is better) Translates to: HFLVVIASCNFEGTYPMGTICRI*RLVMTM Trigger: CATGGTCATCACCAGCCTGCAGATTCTGCAGATGGT...CCCCATGGGATATGTACCCTCAAAGTTGCAGGAAGCTATGACAACCAAGAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR GCA 90 bp | CAGTCCACTCTCCCCTCCCCTCCAAGTCCACAAATCCTCAAGATCATGTTGACCAGATGTAATTCAGTATaGCAAAGATGGTGCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: QSTLPSPPSPQILKIMLTRCNSV*QRWCPE Trigger: TTCTGGGCACCATCTTTGGCATACTGAATTACATCT...GGTCAACATGATCTTGAGGATTTGTGGACTTGGAGGGGAGGGGAGAGTGGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CCA 90 bp | GGACCTCAGTCCTATCTCCTTCCTAGGGCTTGGTTTTCCTTCACATTAAAGACATGTTCCGTTGTTGTGTaGCATCCTTTCTCCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: GPQSYLLPRAWFSFTLKTCSVVV*HPFSCL Trigger: GAGGCAGGAGAAAGGATGCCACACAACAACGGAACA...TGTCTTTAATGTGAAGGAAAACCAAGCCCTAGGAAGGAGATAGGACTGAGGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR TCA 90 bp | ACATATCCCATGGGGGAAACCATACAGGGAGGTACCCTAATCATTCTCCCATACGTTCAACAACCTTGCTaGGAAGAAAGAGAAAGGACC | + |
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Preference number: 4 (lower is better) Translates to: TYPMGETIQGGTLIILPYVQQPC*EERERT Trigger: GGTCCTTTCTCTTTCTTCTCAGCAAGGTTGTTGAAC...GTATGGGAGAATGATTAGGGTACCTCCCTGTATGGTTTCCCCCATGGGATATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR GCA 90 bp | AGTCAGTCCACTCTCCCCTCCCCTCCAAGTCCACAAATCCTCAAGATCATGTTGAGATGTAATTCAGTATaGCAAAGATGGTGCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SQSTLPSPPSPQILKIMLRCNSV*QRWCPE Trigger: TTCTGGGCACCATCTTTGGCATACTGAATTACATCT...CAACATGATCTTGAGGATTTGTGGACTTGGAGGGGAGGGGAGAGTGGACTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CCA 90 bp | GGACCTCAGTCCTATCTCCTTCCTAGGGCTTGGTTTTCCTTCACATTAAAGACAGTGGACAAAGATGAGTaGACGCTTACGCAGGATGAT | + |
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Preference number: 4 (lower is better) Translates to: GPQSYLLPRAWFSFTLKTVDKDE*TLTQDD Trigger: ATCATCCTGCGTAAGCGTCCACTCATCTTTGTCCAC...TGTCTTTAATGTGAAGGAAAACCAAGCCCTAGGAAGGAGATAGGACTGAGGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CCA 90 bp | TACATATCCCATGGGGGAAACCATACAGGGAGGTACCCTAATCATTCTCCCATATCAGTATGCCAAAGATaGTGCCCAGAACCATCTGCA | + |
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Preference number: 4 (lower is better) Translates to: YISHGGNHTGRYPNHSPISVCQR*CPEPSA Trigger: TGCAGATGGTTCTGGGCACCATCTTTGGCATACTGA...TATGGGAGAATGATTAGGGTACCTCCCTGTATGGTTTCCCCCATGGGATATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CCA 90 bp | GAAACATCAAAGTACCAAACCACACACCCCCTATCCCCAAGGGTGACATTTCTTTCAGTATGCCAAAGATaGTGCCCAGAACCATCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ETSKYQTTHPLSPRVTFLSVCQR*CPEPSA Trigger: TGCAGATGGTTCTGGGCACCATCTTTGGCATACTGA...AAGAAATGTCACCCTTGGGGATAGGGGGTGTGTGGTTTGGTACTTTGATGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CCA 90 bp | CATTTCTTGGTTGTCATAGCTTCCTGCAACTTTGAGGGTACATATCCCATGGGGGTGTACATGACAGAATaGACGCCAAAGTTCATGGTC | + |
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Preference number: 4 (lower is better) Translates to: HFLVVIASCNFEGTYPMGVYMTE*TPKFMV Trigger: GACCATGAACTTTGGCGTCCATTCTGTCATGTACAC...CCCCATGGGATATGTACCCTCAAAGTTGCAGGAAGCTATGACAACCAAGAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR TCA 90 bp | TACATATCCCATGGGGGAAACCATACAGGGAGGTACCCTAATCATTCTCCCATAAGTGAGCGAATAGGATaGAATAGGTCCCATATAGCA | + |
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Preference number: 4 (lower is better) Translates to: YISHGGNHTGRYPNHSPISERIG*NRSHIA Trigger: TGCTATATGGGACCTATTTCATCCTATTCGCTCACT...TATGGGAGAATGATTAGGGTACCTCCCTGTATGGTTTCCCCCATGGGATATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR TCA 90 bp | GGACCTCAGTCCTATCTCCTTCCTAGGGCTTGGTTTTCCTTCACATTAAAGACAAGTGAGCGAATAGGATaGAATAGGTCCCATATAGCA | + |
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Preference number: 4 (lower is better) Translates to: GPQSYLLPRAWFSFTLKTSERIG*NRSHIA Trigger: TGCTATATGGGACCTATTTCATCCTATTCGCTCACT...TGTCTTTAATGTGAAGGAAAACCAAGCCCTAGGAAGGAGATAGGACTGAGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR TCA 90 bp | GTCTCTAACAGCAATAAACTTCTAGTCTGTAAAAGACATTTATTAAGCGCCTACCAAAGTTCATGGTCATaGACCAGCCACCCGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: VSNSNKLLVCKRHLLSAYQSSWS*TSHPKA Trigger: TGCCTTCGGGTGGCTGGTTCATGACCATGAACTTTG...GTAGGCGCTTAATAAATGTCTTTTACAGACTAGAAGTTTATTGCTGTTAGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237098.2 |
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| CDS-3UTR TCA 90 bp | ACTTGTTTCTCACTGTTCCTTTCAGAGGCTTGGGTCTCTAACAGCAATAAACTTGATAGACGACCACTATaGGAAATGAGCTTACCCAGT | + |
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Preference number: 4 (lower is better) Translates to: TCFSLFLSEAWVSNSNKLDRRPL*EMSLPS Trigger: ACTGGGTAAGCTCATTTCTCATAGTGGTCGTCTATC...AAGTTTATTGCTGTTAGAGACCCAAGCCTCTGAAAGGAACAGTGAGAAACAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237098.2 |
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| CDS-3UTR GCA 90 bp | GGACCTCAGTCCTATCTCCTTCCTAGGGCTTGGTTTTCCTTCACATTAAAGACATGTAAACATCACTGTTaGCATAAACTTCCACATCCT | + |
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Preference number: 4 (lower is better) Translates to: GPQSYLLPRAWFSFTLKTCKHHC*HKLPHP Trigger: AGGATGTGGAAGTTTATGGCAACAGTGATGTTTACA...TGTCTTTAATGTGAAGGAAAACCAAGCCCTAGGAAGGAGATAGGACTGAGGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR TCA 90 bp | GTCTCTAACAGCAATAAACTTCTAGTCTGTAAAAGACATTTATTAAGCGCCTACTGTATCCAAAGCTTGTaGACAGTAGCACTGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VSNSNKLLVCKRHLLSAYCIQSL*TVALCC Trigger: ACAGCACAGTGCTACTGTTCACAAGCTTTGGATACA...GTAGGCGCTTAATAAATGTCTTTTACAGACTAGAAGTTTATTGCTGTTAGAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237098.2 |
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| CDS-3UTR GCA 90 bp | GAGGCTTGGGTCTCTAACAGCAATAAACTTCTAGTCTGTAAAAGACATTTATTATGTAAACATCACTGTTaGCATAAACTTCCACATCCT | + |
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Preference number: 4 (lower is better) Translates to: EAWVSNSNKLLVCKRHLLCKHHC*HKLPHP Trigger: AGGATGTGGAAGTTTATGGCAACAGTGATGTTTACA...TAATAAATGTCTTTTACAGACTAGAAGTTTATTGCTGTTAGAGACCCAAGCCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237098.2 |
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| CDS-3UTR CAA 90 bp | AGTCAGTCCACTCTCCCCTCCCCTCCAAGTCCACAAATCCTCAAGATCATGTTGAAGCACACGGTTTGCTaGAGGCCCACTGTAAACATC | + |
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Preference number: 5 (lower is better) Translates to: SQSTLPSPPSPQILKIMLKHTVC*RPTVNI Trigger: GATGTTTACAGTGGGCCTCAAGCAAACCGTGTGCTT...CAACATGATCTTGAGGATTTGTGGACTTGGAGGGGAGGGGAGAGTGGACTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CAA 90 bp | CCTACCACAGAGTCAGTCCACTCTCCCCTCCCCTCCAAGTCCACAAATCCTCAAAGAAGAAGTGTTCCGTaGTTGTGTGGCATCCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: PTTESVHSPLPSKSTNPQRRSVP*LCGILS Trigger: AGAAAGGATGCCACACAACAACGGAACACTTCTTCT...TTGAGGATTTGTGGACTTGGAGGGGAGGGGAGAGTGGACTGACTCTGTGGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CAA 90 bp | ACATATCCCATGGGGGAAACCATACAGGGAGGTACCCTAATCATTCTCCCATACAAGCACACGGTTTGCTaGAGGCCCACTGTAAACATC | + |
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Preference number: 5 (lower is better) Translates to: TYPMGETIQGGTLIILPYKHTVC*RPTVNI Trigger: GATGTTTACAGTGGGCCTCAAGCAAACCGTGTGCTT...GTATGGGAGAATGATTAGGGTACCTCCCTGTATGGTTTCCCCCATGGGATATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CAA 90 bp | GGGTACATATCCCATGGGGGAAACCATACAGGGAGGTACCCTAATCATTCTCCCCCCAGTTCAACAACCTaGCTGAGAAGAAAGAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: GYISHGGNHTGRYPNHSPPSSTT*LRRKRK Trigger: CTTTCTCTTTCTTCTCAGCAAGGTTGTTGAACTGGG...GGGAGAATGATTAGGGTACCTCCCTGTATGGTTTCCCCCATGGGATATGTACCC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS CCA 90 bp | TTGTTCTTGTATCCAAAGCTTGTGAACAGTAGCACTGTGCTGTGGTaGTACCAGTGGACAAAGATGAGTGGACGCTTACGCAGGATGATG | + |
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Preference number: 5 (lower is better) Translates to: LFLYPKLVNSSTVLW*YQWTKMSGRLRRMM Trigger: CATCATCCTGCGTAAGCGTCCACTCATCTTTGTCCACTGGTACCACCACAGCACAGTGCTACTGTTCACAAGCTTTGGATACAAGAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS CCA 90 bp | ACTTTGTTCTTGTATCCAAAGCTTGTGAACAGTAGCACTGTGCTGTaGTGGTACCAGTGGACAAAGATGAGTGGACGCTTACGCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: TLFLYPKLVNSSTVL*WYQWTKMSGRLRRM Trigger: CATCCTGCGTAAGCGTCCACTCATCTTTGTCCACTGGTACCACCACAGCACAGTGCTACTGTTCACAAGCTTTGGATACAAGAACAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CAA 90 bp | CATTTCTTGGTTGTCATAGCTTCCTGCAACTTTGAGGGTACATATCCCATGGGGAGAAGTGTTCCGTTGTaGTGTGGCATCCTTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: HFLVVIASCNFEGTYPMGRSVPL*CGILSP Trigger: AGGAGAAAGGATGCCACACAACAACGGAACACTTCT...CCCCATGGGATATGTACCCTCAAAGTTGCAGGAAGCTATGACAACCAAGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CAA 90 bp | TACATATCCCATGGGGGAAACCATACAGGGAGGTACCCTAATCATTCTCCCATAAGAAGAAGTGTTCCGTaGTTGTGTGGCATCCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: YISHGGNHTGRYPNHSPIRRSVP*LCGILS Trigger: AGAAAGGATGCCACACAACAACGGAACACTTCTTCT...TATGGGAGAATGATTAGGGTACCTCCCTGTATGGTTTCCCCCATGGGATATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS-3UTR CAA 90 bp | ACTTGTTTCTCACTGTTCCTTTCAGAGGCTTGGGTCTCTAACAGCAATAAACTTCCCAGTTCAACAACCTaGCTGAGAAGAAAGAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: TCFSLFLSEAWVSNSNKLPSSTT*LRRKRK Trigger: CTTTCTCTTTCTTCTCAGCAAGGTTGTTGAACTGGG...AAGTTTATTGCTGTTAGAGACCCAAGCCTCTGAAAGGAACAGTGAGAAACAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237098.2 |
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| CDS TCA 72 bp | AACGATGAGCAACAGATAGACGACCACTATGAGAAATaGGCTTACCCGGGGCGGGCGCGTCGTCGGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: NDEQQIDDHYEK*AYPGRARRRRL Trigger: AAGTCTCCGACGACGCGCCCGCCCCGGGTAAGCTCATTTCTCATAGTGGTCGTCTATCTGTTGCTCATCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043739.6 |
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| CDS CCA 72 bp | CACTGTGCTGTGGTGGTACCAGTGGACAAAGATGAGTaGACGCTTACGCAGGATGATGAAGGCCGTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: HCAVVVPVDKDE*TLTQDDEGRVS Trigger: GGAGACACGGCCTTCATCATCCTGCGTAAGCGTCCACTCATCTTTGTCCACTGGTACCACCACAGCACAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS CAA 72 bp | TACGGCGTCATCCGTGTAGATGGCAAAGCACACGGTTaGCTTGAGGCCCACTGTAAACATCACTGTTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: YGVIRVDGKAHG*LEAHCKHHCCH Trigger: ATGGCAACAGTGATGTTTACAGTGGGCCTCAAGCAAACCGTGTGCTTTGCCATCTACACGGATGACGCCGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS TCA 72 bp | CACCCGAAGGCACTTTGTTCTTGTATCCAAAGCTTGTaGACAGTAGCACTGTGCTGTGGTGGTACCAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: HPKALCSCIQSL*TVALCCGGTSG Trigger: TCCACTGGTACCACCACAGCACAGTGCTACTGTTCACAAGCTTTGGATACAAGAACAAAGTGCCTTCGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS CCA 72 bp | TATCCAAAGCTTGTGAACAGTAGCACTGTGCTGTGGTaGTACCAGTGGACAAAGATGAGTGGACGCTTACGC | + |
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Preference number: 6 (lower is better) Translates to: YPKLVNSSTVLW*YQWTKMSGRLR Trigger: GCGTAAGCGTCCACTCATCTTTGTCCACTGGTACCACCACAGCACAGTGCTACTGTTCACAAGCTTTGGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS CAA 90 bp | GAATCTGACTACGGCGTCATCCGTGTAGATGGCAAAGCACACGGTTaGCTTGAGGCCCACTGTAAACATCACTGTTGCCATAAACTTCCA | + |
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Preference number: 6 (lower is better) Translates to: ESDYGVIRVDGKAHG*LEAHCKHHCCHKLP Trigger: TGGAAGTTTATGGCAACAGTGATGTTTACAGTGGGCCTCAAGCAAACCGTGTGCTTTGCCATCTACACGGATGACGCCGTAGTCAGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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| CDS CAA 72 bp | AAGTTCATGGTCATGAACCAGCCACCCGAAGGCACTTaGTTCTTGTATCCAAAGCTTGTGAACAGTAGCACT | + |
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Preference number: 6 (lower is better) Translates to: KFMVMNQPPEGT*FLYPKLVNSST Trigger: AGTGCTACTGTTCACAAGCTTTGGATACAAGAACAAAGTGCCTTCGGGTGGCTGGTTCATGACCATGAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043739.6 ENSMUST00000237098.2 |
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