Pregenerated sensors for ELOVL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021364Ensembl transcript IDs: ENSMUST00000021793.15, ENSMUST00000117096.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGCTTGCCCAGAAAGGAAGACAGGGGTGGGCAGGCCCCGCCGTTaGCACTCGAGGAACACCTACCTGGTGCCCATGCGCTGGGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: GACPERKTGVGRPRR*HSRNTYLVPMRWVP Trigger: TGGCACCCAGCGCATGGGCACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTTCCTTTCTGGGCAAGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR CCA 90 bp | CAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTaGTGCCCATGCGCTGGGTGCCAGTGCCATGAACCAAGAACACAT | + |
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Preference number: 1 (lower is better) Translates to: QGWAGPAVGTRGTPT*CPCAGCQCHEPRTH Trigger: ATGTGTTCTTGGTTCATGGCACTGGCACCCAGCGCATGGGCACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR GCA 90 bp | GGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTGGTaGCCATGCGCTGGGTGCCAGTGCCATGAACCAAGAACACATTTG | + |
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Preference number: 1 (lower is better) Translates to: GWAGPAVGTRGTPTW*PCAGCQCHEPRTHL Trigger: CAAATGTGTTCTTGGTTCATGGCACTGGCACCCAGCGCATGGGCACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR GCA 90 bp | GCCGTTGGCACTCGAGGAACACCTACCTGGTGCCCATGCGCTGGGTaGCAGTGCCATGAACCAAGAACACATTTGCTGAAATGGAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: AVGTRGTPTWCPCAG*QCHEPRTHLLKWRG Trigger: TCCCCTCCATTTCAGCAAATGTGTTCTTGGTTCATGGCACTGGCACCCAGCGCATGGGCACCAGGTAGGTGTTCCTCGAGTGCCAACGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR GCA 90 bp | GCTCAGCAACTGCTTGCAATGGTGTTCACCAGCAGGCTCAGCAACTaGTTGCAATGGTGTTCACCAGCAGGCTCAGCAGCAACAGCTGAC | + |
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Preference number: 1 (lower is better) Translates to: AQQLLAMVFTSRLSN*LQWCSPAGSAATAD Trigger: GTCAGCTGTTGCTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCTGAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR GCA 90 bp | TACAACTTTCTATTCAGTCTCTGCTTTAAAACAAGCTCGTCTGTTTaGTGCCGCCGCCGCCGCCGCCACCACCTCAGTTTGTGTTCCCCG | + |
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Preference number: 1 (lower is better) Translates to: YNFLFSLCFKTSSSV*CRRRRRHHLSLCSP Trigger: CGGGGAACACAAACTGAGGTGGTGGCGGCGGCGGCGGCGGCAGCAAACAGACGAGCTTGTTTTAAAGCAGAGACTGAATAGAAAGTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR TCA 90 bp | CCTTGCTCAGGCTCTGTACTAGGTTCTCCACAGAGACCACAGTTCTaGGCAGGGACAGCATTGCTGCTTGAGCCAGACACATCATTATGG | + |
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Preference number: 1 (lower is better) Translates to: PCSGSVLGSPQRPQF*AGTALLLEPDTSLW Trigger: CCATAATGATGTGTCTGGCTCAAGCAGCAATGCTGTCCCTGCTCAGAACTGTGGTCTCTGTGGAGAACCTAGTACAGAGCCTGAGCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR GCA 90 bp | AGCAACTGCTTGCAATGGTGTTCACCAGCAGGCTCAGCAACTGCTTaGAATGGTGTTCACCAGCAGGCTCAGCAGCAACAGCTGACAAAT | + |
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Preference number: 1 (lower is better) Translates to: SNCLQWCSPAGSATA*NGVHQQAQQQQLTN Trigger: ATTTGTCAGCTGTTGCTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR CCA 90 bp | GTCTGTTCAACAGGAATGACAGACATGGCACAGGACATCGGACTGTaGTGGTTTTCAAAATACACCAGTGAGAAGGGTGGTATAGTTACG | + |
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Preference number: 1 (lower is better) Translates to: VCSTGMTDMAQDIGL*WFSKYTSEKGGIVT Trigger: CGTAACTATACCACCCTTCTCACTGGTGTATTTTGAAAACCACCACAGTCCGATGTCCTGTGCCATGTCTGTCATTCCTGTTGAACAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR GCA 90 bp | AAGGAATTAGTTTATGCTAAAACATACAACTTTCTATTCAGTCTCTaGTTTAAAACAAGCTCGTCTGTTTGCTGCCGCCGCCGCCGCCGC | + |
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Preference number: 1 (lower is better) Translates to: KELVYAKTYNFLFSL*FKTSSSVCCRRRRR Trigger: GCGGCGGCGGCGGCGGCAGCAAACAGACGAGCTTGTTTTAAAGCAGAGACTGAATAGAAAGTTGTATGTTTTAGCATAAACTAATTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR CCA 90 bp | TGTTCAACAGGAATGACAGACATGGCACAGGACATCGGACTGTGGTaGTTTTCAAAATACACCAGTGAGAAGGGTGGTATAGTTACGAGT | + |
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Preference number: 1 (lower is better) Translates to: CSTGMTDMAQDIGLW*FSKYTSEKGGIVTS Trigger: ACTCGTAACTATACCACCCTTCTCACTGGTGTATTTTGAAAACCACCACAGTCCGATGTCCTGTGCCATGTCTGTCATTCCTGTTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR TCA 90 bp | ATGACTGCTATGCTTTTCTCCTCTCTAACAGTTAAATTTAACTCATaGAGCTTGACAGCAATGGCTTGCAATGGTGTTCACGAGCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: MTAMLFSSLTVKFNS*SLTAMACNGVHEQA Trigger: AGCCTGCTCGTGAACACCATTGCAAGCCATTGCTGTCAAGCTTCATGAGTTAAATTTAACTGTTAGAGAGGAGAAAAGCATAGCAGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR CCA 90 bp | CAGATCAGTTTGAGAAATTGTTTAGAAAATGCACTGAAGCATAGGTaGTCACCAGACAGGAAGAGTCTGTTCAACAGGAATGACAGACAT | + |
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Preference number: 1 (lower is better) Translates to: QISLRNCLENALKHR*SPDRKSLFNRNDRH Trigger: ATGTCTGTCATTCCTGTTGAACAGACTCTTCCTGTCTGGTGACCACCTATGCTTCAGTGCATTTTCTAAACAATTTCTCAAACTGATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR GCA 90 bp | AAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTGGTGAGCTCGTCTGTTTGCTaGCGCCGCCGCCGCCGCCAC | + |
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Preference number: 2 (lower is better) Translates to: KTGVGRPRRWHSRNTYLVSSSVC*RRRRRH Trigger: GTGGCGGCGGCGGCGGCGGCAGCAAACAGACGAGCT...CACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR CAA 90 bp | GGGAGCTTGCCCAGAAAGGAAGACAGGGGTGGGCAGGCCCCGCCGTaGGCACTCGAGGAACACCTACCTGGTGCCCATGCGCTGGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: GSLPRKEDRGGQAPP*ALEEHLPGAHALGA Trigger: GGCACCCAGCGCATGGGCACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTTCCTTTCTGGGCAAGCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGCTCAGCAACTGCTTGCAATGGTGTTCACCAGCAGGCTCAGCAGCAACAAGCTCGTCTGTTTGCTaGCGCCGCCGCCGCCGCCAC | + |
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Preference number: 2 (lower is better) Translates to: SRLSNCLQWCSPAGSAATSSSVC*RRRRRH Trigger: GTGGCGGCGGCGGCGGCGGCAGCAAACAGACGAGCT...TGTTGCTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCTGAGCCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR GCA 90 bp | AAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTGGTGTTGACAGCAATGGCTTaGAATGGTGTTCACGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: KTGVGRPRRWHSRNTYLVLTAMA*NGVHEQ Trigger: CTGCTCGTGAACACCATTGCAAGCCATTGCTGTCAA...CACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR TCA 90 bp | AAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTGGTGTTTTTCTTTTCTGGTTaGGACAGGGTCTTGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: KTGVGRPRRWHSRNTYLVFFFSG*DRVLCL Trigger: CAGGCACAAGACCCTGTCTCAACCAGAAAAGAAAAA...CACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR CCA 90 bp | AAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTGGTGTGTTCAGAAAGGGCATaGCAGCTGTATGTAGACACT | + |
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Preference number: 2 (lower is better) Translates to: KTGVGRPRRWHSRNTYLVCSERA*QLYVDT Trigger: AGTGTCTACATACAGCTGCCATGCCCTTTCTGAACA...CACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR TCA 90 bp | AAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTGGTGCTGACAGTTATTGCTTaGCATAGACTAGAACAGACC | + |
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Preference number: 2 (lower is better) Translates to: KTGVGRPRRWHSRNTYLVLTVIA*HRLEQT Trigger: GGTCTGTTCTAGTCTATGTCAAGCAATAACTGTCAG...CACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR CCA 90 bp | AAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTGGTGGCCCTTTTTCACACCTaGTATAGATTAACAGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: KTGVGRPRRWHSRNTYLVALFHT*YRLTVV Trigger: CACCACTGTTAATCTATACCAGGTGTGAAAAAGGGC...CACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR TCA 90 bp | AAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTGGTGCTCAGCAGCAACAGCTaGCAAATAGAATGTCTATTT | + |
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Preference number: 2 (lower is better) Translates to: KTGVGRPRRWHSRNTYLVLSSNS*QIECLF Trigger: AAATAGACATTCTATTTGTCAGCTGTTGCTGCTGAG...CACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTCAAGAACACATTTGCTaGAATGGAGGGGAAATAGAG | + |
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Preference number: 2 (lower is better) Translates to: KEDRGGQAPPLALEEHLPQEHIC*NGGEIE Trigger: CTCTATTTCCCCTCCATTTCAGCAAATGTGTTCTTG...AGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR CCA 90 bp | AAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTGGTGACACATTTGCTGAAATaGAGGGGAAATAGAGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: KTGVGRPRRWHSRNTYLVTHLLK*RGNRVS Trigger: ACTTACTCTATTTCCCCTCCATTTCAGCAAATGTGT...CACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR CAA 90 bp | CAGCAACTGCTTGCAATGGTGTTCACCAGCAGGCTCAGCAACTGCTaGCAATGGTGTTCACCAGCAGGCTCAGCAGCAACAGCTGACAAA | + |
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Preference number: 2 (lower is better) Translates to: QQLLAMVFTSRLSNC*QWCSPAGSAATADK Trigger: TTTGTCAGCTGTTGCTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTAAAGCCCCTGAGTTATaGTTTGGCAAACACATTTTT | + |
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Preference number: 2 (lower is better) Translates to: KEDRGGQAPPLALEEHLPKAPEL*FGKHIF Trigger: AAAAATGTGTTTGCCAAATCATAACTCAGGGGCTTT...AGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGCTCAGCAACTGCTTGCAATGGTGTTCACCAGCAGGCTCAGCAGCAACATATGCGAAGAAGAACTaGAATTGGACAACTCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: SRLSNCLQWCSPAGSAATYAKKN*NWTTPA Trigger: GGCTGGAGTTGTCCAATTGCAGTTCTTCTTCGCATA...TGTTGCTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCTGAGCCTGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGAGTCTGTTCAACAGGAATGACAGACATGGCACAGGACATCGGACTGTGAAGGAGGTGGTCCATTaGCTTGCTCAGGCTCTGTAC | + |
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Preference number: 2 (lower is better) Translates to: RKSLFNRNDRHGTGHRTVKEVVH*LAQALY Trigger: GTACAGAGCCTGAGCAAGGCAATGGACCACCTCCTT...CACAGTCCGATGTCCTGTGCCATGTCTGTCATTCCTGTTGAACAGACTCTTCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGAGTCTGTTCAACAGGAATGACAGACATGGCACAGGACATCGGACTGTGGGTGATCCATCAGTTTaGGGAAAAGGAGGTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: RKSLFNRNDRHGTGHRTVGDPSV*GKGGGP Trigger: TGGACCACCTCCTTTTCCTCAAACTGATGGATCACC...CACAGTCCGATGTCCTGTGCCATGTCTGTCATTCCTGTTGAACAGACTCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR CAA 90 bp | TGCACTGGGAGGTCTAAAGCTGGCTGGTACTGTGAGCTGCCACTGTaGATCTGCTATAGGAAGATAACACCCTTTGTGCTACACAGATGT | + |
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Preference number: 2 (lower is better) Translates to: CTGRSKAGWYCELPL*ICYRKITPFVLHRC Trigger: ACATCTGTGTAGCACAAAGGGTGTTATCTTCCTATAGCAGATCAACAGTGGCAGCTCACAGTACCAGCCAGCTTTAGACCTCCCAGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGAGTCTGTTCAACAGGAATGACAGACATGGCACAGGACATCGGACTGTGTCAATACCCAAATGCTaGACTCACAGATGGGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: RKSLFNRNDRHGTGHRTVSIPKC*THRWVP Trigger: TGGCACCCATCTGTGAGTCCAGCATTTGGGTATTGA...CACAGTCCGATGTCCTGTGCCATGTCTGTCATTCCTGTTGAACAGACTCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGAGTCTGTTCAACAGGAATGACAGACATGGCACAGGACATCGGACTGTGGGAGGTAGACAGGAATaGATGAGCAAGGATGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: RKSLFNRNDRHGTGHRTVGGRQE*MSKDAN Trigger: ATTGGCATCCTTGCTCATCCATTCCTGTCTACCTCC...CACAGTCCGATGTCCTGTGCCATGTCTGTCATTCCTGTTGAACAGACTCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGCTCAGCAACTGCTTGCAATGGTGTTCACCAGCAGGCTCAGCAGCAACAAAGAAGAACTGCAATTaGACAACTCCAGCCTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: SRLSNCLQWCSPAGSAATKKNCN*TTPAFV Trigger: AACAAAGGCTGGAGTTGTCCAATTGCAGTTCTTCTT...TGTTGCTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCTGAGCCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR TCA 90 bp | CAGACACATCATTATGGCTTAGTCCCACCCCACGAGATCGTTCCAAATGACTGCGTAGACAGGAATGGATaGGCAAGGATGCCAATTGAA | + |
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Preference number: 2 (lower is better) Translates to: QTHHYGLVPPHEIVPNDCVDRNG*ARMPIE Trigger: TTCAATTGGCATCCTTGCTCATCCATTCCTGTCTAC...GCAGTCATTTGGAACGATCTCGTGGGGTGGGACTAAGCCATAATGATGTGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGAGTCTGTTCAACAGGAATGACAGACATGGCACAGGACATCGGACTGTGCGAGATCGTTCCAAATaGCTGCTATGCTTTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: RKSLFNRNDRHGTGHRTVRDRSK*LLCFSP Trigger: AGGAGAAAAGCATAGCAGTCATTTGGAACGATCTCG...CACAGTCCGATGTCCTGTGCCATGTCTGTCATTCCTGTTGAACAGACTCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR CAA 90 bp | TGCATTTCTATGCGAAGAAGAACTGCAATTGGACAACTCCAGCCTTaGTTCAGAAAGGGCATGGCAGCTGTATGTAGACACTGGCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: CISMRRRTAIGQLQP*FRKGMAAVCRHWLW Trigger: CCAAAGCCAGTGTCTACATACAGCTGCCATGCCCTTTCTGAACAAAGGCTGGAGTTGTCCAATTGCAGTTCTTCTTCGCATAGAAATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR TCA 90 bp | GGATGCCAATTGAAACAGAGACAGCTCTGTTCAAAGCCCCTGAGTTATGATTTGTCTGAAGACTTGCCATaGAGAAACGAAGCCCGAGTC | + |
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Preference number: 2 (lower is better) Translates to: GCQLKQRQLCSKPLSYDLSEDLP*RNEARV Trigger: GACTCGGGCTTCGTTTCTTCATGGCAAGTCTTCAGA...CAAATCATAACTCAGGGGCTTTGAACAGAGCTGTCTCTGTTTCAATTGGCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR TCA 90 bp | GACTCCTGGCTTGAGAGGGGAAAGGGTTTTGCTGGATTCTGTCTTGCTAAGGATCTGACAGTTATTGCTTaGCATAGACTAGAACAGACC | + |
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Preference number: 2 (lower is better) Translates to: DSWLERGKGFAGFCLAKDLTVIA*HRLEQT Trigger: GGTCTGTTCTAGTCTATGTCAAGCAATAACTGTCAG...ATCCTTAGCAAGACAGAATCCAGCAAAACCCTTTCCCCTCTCAAGCCAGGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR GCA 90 bp | ATGAATAAAAGGGAATTCACTTGGGAAAAGACGGTTTCCTATCAGATTATAGAGCCTACCTGGTGCCCATaGGCTGGGTGCCAGTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: MNKREFTWEKTVSYQIIEPTWCP*AGCQCH Trigger: ATGGCACTGGCACCCAGCGCATGGGCACCAGGTAGG...CTCTATAATCTGATAGGAAACCGTCTTTTCCCAAGTGAATTCCCTTTTATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR TCA 90 bp | ACACATTTGCTGAAATGGAGGGGAAATAGAGTAAGTTGTGTTTTGTGTATGTTTCAGAGACCACAGTTCTaGGCAGGGACAGCATTGCTG | + |
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Preference number: 2 (lower is better) Translates to: THLLKWRGNRVSCVLCMFQRPQF*AGTALL Trigger: CAGCAATGCTGTCCCTGCTCAGAACTGTGGTCTCTG...AAACATACACAAAACACAACTTACTCTATTTCCCCTCCATTTCAGCAAATGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGAGTCTGTTCAACAGGAATGACAGACATGGCACAGGACATCGGACTGTGAGACTAATCGATTTATaGACTGACAGTTATTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: RKSLFNRNDRHGTGHRTVRLIDL*TDSYCL Trigger: CAAGCAATAACTGTCAGTGCATAAATCGATTAGTCT...CACAGTCCGATGTCCTGTGCCATGTCTGTCATTCCTGTTGAACAGACTCTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR GCA 90 bp | CAGACACATCATTATGGCTTAGTCCCACCCCACGAGATCGTTCCAAATGACTGCAGACTAATCGATTTATaGACTGACAGTTATTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: QTHHYGLVPPHEIVPNDCRLIDL*TDSYCL Trigger: CAAGCAATAACTGTCAGTGCATAAATCGATTAGTCT...GCAGTCATTTGGAACGATCTCGTGGGGTGGGACTAAGCCATAATGATGTGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR-3UTR CCA 90 bp | ACACATTTGCTGAAATGGAGGGGAAATAGAGTAAGTTGTGTTTTGTGTATGTTTTTGAGGAAAAGGAGGTaGTCCATTGCCTTGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: THLLKWRGNRVSCVLCMFLRKRR*SIALLR Trigger: CCTGAGCAAGGCAATGGACCACCTCCTTTTCCTCAA...AAACATACACAAAACACAACTTACTCTATTTCCCCTCCATTTCAGCAAATGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR CAA 90 bp | TTTGTAAATATTCCAATTGCATTTCTATGCGAAGAAGAACTGCAATaGGACAACTCCAGCCTTTGTTCAGAAAGGGCATGGCAGCTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: FVNIPIAFLCEEELQ*DNSSLCSERAWQLY Trigger: ATACAGCTGCCATGCCCTTTCTGAACAAAGGCTGGAGTTGTCCAATTGCAGTTCTTCTTCGCATAGAAATGCAATTGGAATATTTACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAATAAAAGGGAATTCACTTGGGAAAAGACGGTTTCCTATCAGATTATAGAGTCTGTTCAACAGGAATaGCAGACATGGCACAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: MNKREFTWEKTVSYQIIESVQQE*QTWHRT Trigger: TGTCCTGTGCCATGTCTGTCATTCCTGTTGAACAGA...CTCTATAATCTGATAGGAAACCGTCTTTTCCCAAGTGAATTCCCTTTTATTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAATAAAAGGGAATTCACTTGGGAAAAGACGGTTTCCTATCAGATTATAGAGTTAACTCATGAAGCTTaGCAGCAATGGCTTGCAATG | + |
|
Preference number: 2 (lower is better) Translates to: MNKREFTWEKTVSYQIIELTHEA*QQWLAM Trigger: CATTGCAAGCCATTGCTGTCAAGCTTCATGAGTTAA...CTCTATAATCTGATAGGAAACCGTCTTTTCCCAAGTGAATTCCCTTTTATTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTAACAAGCTCGTCTGTTaGCTGCCGCCGCCGCCGCCG | + |
|
Preference number: 3 (lower is better) Translates to: KEDRGGQAPPLALEEHLPNKLVC*LPPPPP Trigger: CGGCGGCGGCGGCGGCAGCAAACAGACGAGCTTGTT...AGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTTCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTGGTGAAAGGAGGTGGTCCATaGCCTTGCTCAGGCTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KTGVGRPRRWHSRNTYLVKGGGP*PCSGSV Trigger: TACAGAGCCTGAGCAAGGCAATGGACCACCTCCTTT...CACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTGGTGCTTGACAGCAATGGCTaGCAATGGTGTTCACGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KTGVGRPRRWHSRNTYLVLDSNG*QWCSRA Trigger: TGCTCGTGAACACCATTGCAAGCCATTGCTGTCAAG...CACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTGGTGAGAGGGGAAAGGGTTTaGCTGGATTCTGTCTTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: KTGVGRPRRWHSRNTYLVRGERV*LDSVLL Trigger: TAGCAAGACAGAATCCAGCAAAACCCTTTCCCCTCT...CACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACACATCATTATGGCTTAGTCCCACCCCACGAGATCGTTCCAAATGACTGCAACAAGCTCGTCTGTTaGCTGCCGCCGCCGCCGCCG | + |
|
Preference number: 3 (lower is better) Translates to: QTHHYGLVPPHEIVPNDCNKLVC*LPPPPP Trigger: CGGCGGCGGCGGCGGCAGCAAACAGACGAGCTTGTT...GCAGTCATTTGGAACGATCTCGTGGGGTGGGACTAAGCCATAATGATGTGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTGAGCAAGGATGCCAATaGAAACAGAGACAGCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KEDRGGQAPPLALEEHLPEQGCQ*KQRQLC Trigger: ACAGAGCTGTCTCTGTTTCAATTGGCATCCTTGCTC...AGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGGCTCAGCAACTGCTTGCAATGGTGTTCACCAGCAGGCTCAGCAGCAACACGCCACCACCTCAGTTaGTGTTCCCCGGCACTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SRLSNCLQWCSPAGSAATRHHLS*CSPALH Trigger: ATGAAGTGCCGGGGAACACAAACTGAGGTGGTGGCG...TGTTGCTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCTGAGCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR GCA 72 bp | CTATTCAGTCTCTGCTTTAAAACAAGCTCGTCTGTTTaGTGCCGCCGCCGCCGCCGCCACCACCTCAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LFSLCFKTSSSV*CRRRRRHHLSL Trigger: CAAACTGAGGTGGTGGCGGCGGCGGCGGCGGCAGCAAACAGACGAGCTTGTTTTAAAGCAGAGACTGAATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTGAACCAAGAACACATTaGCTGAAATGGAGGGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: KEDRGGQAPPLALEEHLPEPRTH*LKWRGN Trigger: ATTTCCCCTCCATTTCAGCAAATGTGTTCTTGGTTC...AGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR GCA 72 bp | CTGCTTGCAATGGTGTTCACCAGCAGGCTCAGCAACTaGTTGCAATGGTGTTCACCAGCAGGCTCAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLAMVFTSRLSN*LQWCSPAGSAA Trigger: TGCTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR CCA 72 bp | ATGGTGTTCACCAGCAGGCTCAGCAACTGCTTGCAATaGTGTTCACCAGCAGGCTCAGCAGCAACAGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: MVFTSRLSNCLQ*CSPAGSAATAD Trigger: GTCAGCTGTTGCTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCTGAGCCTGCTGGTGAACACCAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR TCA 72 bp | GGCTCTGTACTAGGTTCTCCACAGAGACCACAGTTCTaGGCAGGGACAGCATTGCTGCTTGAGCCAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: GSVLGSPQRPQF*AGTALLLEPDT Trigger: TGTGTCTGGCTCAAGCAGCAATGCTGTCCCTGCTCAGAACTGTGGTCTCTGTGGAGAACCTAGTACAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACACATCATTATGGCTTAGTCCCACCCCACGAGATCGTTCCAAATGACTGCCGCCACCACCTCAGTTaGTGTTCCCCGGCACTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: QTHHYGLVPPHEIVPNDCRHHLS*CSPALH Trigger: ATGAAGTGCCGGGGAACACAAACTGAGGTGGTGGCG...GCAGTCATTTGGAACGATCTCGTGGGGTGGGACTAAGCCATAATGATGTGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR TCA 72 bp | GTGGTCACCAGACAGGAAGAGTCTGTTCAACAGGAATaGCAGACATGGCACAGGACATCGGACTGTGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VVTRQEESVQQE*QTWHRTSDCGG Trigger: ACCACCACAGTCCGATGTCCTGTGCCATGTCTGTCATTCCTGTTGAACAGACTCTTCCTGTCTGGTGACCAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGGCTCAGCAACTGCTTGCAATGGTGTTCACCAGCAGGCTCAGCAGCAACAGAGCAAGGATGCCAATaGAAACAGAGACAGCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SRLSNCLQWCSPAGSAATEQGCQ*KQRQLC Trigger: ACAGAGCTGTCTCTGTTTCAATTGGCATCCTTGCTC...TGTTGCTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCTGAGCCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR GCA 72 bp | CTCCACAGAGACCACAGTTCTGAGCAGGGACAGCATTaGTGCTTGAGCCAGACACATCATTATGGCTTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LHRDHSSEQGQH*CLSQTHHYGLV Trigger: GACTAAGCCATAATGATGTGTCTGGCTCAAGCAGCAATGCTGTCCCTGCTCAGAACTGTGGTCTCTGTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR CCA 72 bp | CGCCTCTCACTGGCGAGCAGGAATAATCTGGTACAATaGCCAGTGATGCCTCTTGAGTCTCATTTTTACCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLSLASRNNLVQ*PVMPLESHFYP Trigger: TGGGTAAAAATGAGACTCAAGAGGCATCACTGGCCATTGTACCAGATTATTCCTGCTCGCCAGTGAGAGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR CCA 72 bp | ACAGGAATGACAGACATGGCACAGGACATCGGACTGTaGTGGTTTTCAAAATACACCAGTGAGAAGGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TGMTDMAQDIGL*WFSKYTSEKGG Trigger: ACCACCCTTCTCACTGGTGTATTTTGAAAACCACCACAGTCCGATGTCCTGTGCCATGTCTGTCATTCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR TCA 72 bp | CACTGGCGAGCAGGAATAATCTGGTACAATGGCCAGTaGTGCCTCTTGAGTCTCATTTTTACCCAGAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: HWRAGIIWYNGQ*CLLSLIFTQNS Trigger: TGAATTCTGGGTAAAAATGAGACTCAAGAGGCATCACTGGCCATTGTACCAGATTATTCCTGCTCGCCAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR TCA 72 bp | GAAAAATGGCTTCTGCCTCCCTTTCCACCCGAGTCATaGTACTGTGTTCTTCAGATGCCATACTTTCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: EKWLLPPFPPES*YCVLQMPYFQR Trigger: CCTTTGAAAGTATGGCATCTGAAGAACACAGTATCATGACTCGGGTGGAAAGGGAGGCAGAAGCCATTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAGAGTCTGTTCAACAGGAATGACAGACATGGCACAGGACATCGGACTGTGTGTTTTGTGTATGTTTaGGGAAATGCCCTTTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RKSLFNRNDRHGTGHRTVCFVYV*GNALFH Trigger: GTGAAAAAGGGCATTTCCCAAAACATACACAAAACA...CACAGTCCGATGTCCTGTGCCATGTCTGTCATTCCTGTTGAACAGACTCTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR TCA 72 bp | AAATCTAGACTAACAAGGGAGGTAGACAGGAATGGATaGGCAAGGATGCCAATTGAAACAGAGACAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KSRLTREVDRNG*ARMPIETETAL Trigger: CAGAGCTGTCTCTGTTTCAATTGGCATCCTTGCTCATCCATTCCTGTCTACCTCCCTTGTTAGTCTAGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR CCA 72 bp | TTCCAATTGCATTTCTATGCGAAGAAGAACTGCAATTaGACAACTCCAGCCTTTGTTCAGAAAGGGCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: FQLHFYAKKNCN*TTPAFVQKGHG Trigger: GCCATGCCCTTTCTGAACAAAGGCTGGAGTTGTCCAATTGCAGTTCTTCTTCGCATAGAAATGCAATTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACATTTGCTGAAATGGAGGGGAAATAGAGTAAGTTGTGTTTTGTGTATGTTTGGACAACTCCAGCCTTaGTTCAGAAAGGGCATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: THLLKWRGNRVSCVLCMFGQLQP*FRKGMA Trigger: TGCCATGCCCTTTCTGAACAAAGGCTGGAGTTGTCC...AAACATACACAAAACACAACTTACTCTATTTCCCCTCCATTTCAGCAAATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR CCA 72 bp | TGCCAGTGCCATGAACCAAGAACACATTTGCTGAAATaGAGGGGAAATAGAGTAAGTTGTGTTTTGTGTATG | + |
|
Preference number: 3 (lower is better) Translates to: CQCHEPRTHLLK*RGNRVSCVLCM Trigger: CATACACAAAACACAACTTACTCTATTTCCCCTCCATTTCAGCAAATGTGTTCTTGGTTCATGGCACTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR CCA 72 bp | TTTGTGTATGTTTTGGGAAATGCCCTTTTTCACACCTaGTATAGATTAACAGTGGTGATCCATCAGTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: FVYVLGNALFHT*YRLTVVIHQFE Trigger: CTCAAACTGATGGATCACCACTGTTAATCTATACCAGGTGTGAAAAAGGGCATTTCCCAAAACATACACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACATTTGCTGAAATGGAGGGGAAATAGAGTAAGTTGTGTTTTGTGTATGTTTCCCCTGAGTTATGATTaGGCAAACACATTTTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: THLLKWRGNRVSCVLCMFPLSYD*ANTFFF Trigger: AAAGAAAAATGTGTTTGCCAAATCATAACTCAGGGG...AAACATACACAAAACACAACTTACTCTATTTCCCCTCCATTTCAGCAAATGTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGAATAAAAGGGAATTCACTTGGGAAAAGACGGTTTCCTATCAGATTATAGAGCGGGAGCAGATCAGTTaGAGAAATTGTTTAGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: MNKREFTWEKTVSYQIIEREQIS*RNCLEN Trigger: ATTTTCTAAACAATTTCTCAAACTGATCTGCTCCCG...CTCTATAATCTGATAGGAAACCGTCTTTTCCCAAGTGAATTCCCTTTTATTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| CDS-3UTR GCA 90 bp | AAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTGGTGACGGCACTCAGCGTGTaGGTGATGGTGAGTACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KTGVGRPRRWHSRNTYLVTALSV*VMVSTN Trigger: GTTCGTACTCACCATCACGCACACGCTGAGTGCCGT...CACCAGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTAGGAAGACTGGAAGATaGGACAGCCAAAGGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KEDRGGQAPPLALEEHLPRKTGR*DSQRGS Trigger: GCTTCCCCTTTGGCTGTCTCATCTTCCAGTCTTCCT...AGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTTTAGCCACAATTAAGTaGGCTTTGGGGAAACCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KEDRGGQAPPLALEEHLPLATIK*ALGKPF Trigger: GAATGGTTTCCCCAAAGCCCACTTAATTGTGGCTAA...AGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGACAGGGGTGGGCAGGCCCCGCCGTTGGCACTCGAGGAACACCTACCTAGAAAGAAGTGTGATTaGGAGGTTATACAAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KEDRGGQAPPLALEEHLPRKKCD*EVIQGE Trigger: CTCACCTTGTATAACCTCGCAATCACACTTCTTTCT...AGGTAGGTGTTCCTCGAGTGCCAACGGCGGGGCCTGCCCACCCCTGTCTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| 3UTR CAA 72 bp | CTTGCAATGGTGTTCACCAGCAGGCTCAGCAACTGCTaGCAATGGTGTTCACCAGCAGGCTCAGCAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LAMVFTSRLSNC*QWCSPAGSAAT Trigger: TGTTGCTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCTGAGCCTGCTGGTGAACACCATTGCAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTGAGAGGGGAAAGGGTTTTGCTGGATTCTGTCTTGCTAAGGATCCCGCTTCACACCACCAGATGTTaGACATGGACGCGTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLRGERVLLDSVLLRIPLHTTRC*TWTRGD Trigger: ATCACCACGCGTCCATGTTCAACATCTGGTGGTGTG...AAGCGGGATCCTTAGCAAGACAGAATCCAGCAAAACCCTTTCCCCTCTCAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTGAGAGGGGAAAGGGTTTTGCTGGATTCTGTCTTGCTAAGGATCCCGCTTAGGAAGACTGGAAGATaGGACAGCCAAAGGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLRGERVLLDSVLLRIPLRKTGR*DSQRGS Trigger: GCTTCCCCTTTGGCTGTCTCATCTTCCAGTCTTCCT...AAGCGGGATCCTTAGCAAGACAGAATCCAGCAAAACCCTTTCCCCTCTCAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGTCTCTGCTTTAAAACAAGCTCGTCTGTTTGCTGCCGCCGCCGCCGCCGCTGTCCAAGAAAGCATTaGCTTCATTATCAAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSLCFKTSSSVCCRRRRRCPRKH*LHYQRP Trigger: AGGCCTTTGATAATGAAGTCAATGCTTTCTTGGACA...GCGGCGGCGGCGGCGGCAGCAAACAGACGAGCTTGTTTTAAAGCAGAGACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021793.15 |
||
| CDS-3UTR TCA 90 bp | GACTCCTGGCTTGAGAGGGGAAAGGGTTTTGCTGGATTCTGTCTTGCTAAGGATCACACCACCAGATGTTaGACATGGACGCGTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DSWLERGKGFAGFCLAKDHTTRC*TWTRGD Trigger: ATCACCACGCGTCCATGTTCAACATCTGGTGGTGTG...ATCCTTAGCAAGACAGAATCCAGCAAAACCCTTTCCCCTCTCAAGCCAGGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGGCTCAGCAACTGCTTGCAATGGTGTTCACCAGCAGGCTCAGCAGCAACAAGTTTAAGAACAGGATaGCCAGCGTCATCATATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRLSNCLQWCSPAGSAATSLRTG*PASSYR Trigger: CCTATATGATGACGCTGGTCATCCTGTTCTTAAACT...TGTTGCTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCTGAGCCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| CDS-3UTR CCA 90 bp | CAGACACATCATTATGGCTTAGTCCCACCCCACGAGATCGTTCCAAATGACTGCAAAGGTACTTGTGCATaGACGGGAACACAGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTHHYGLVPPHEIVPNDCKGTCA*TGTQTG Trigger: GCCTGTCTGTGTTCCCGTCCATGCACAAGTACCTTT...GCAGTCATTTGGAACGATCTCGTGGGGTGGGACTAAGCCATAATGATGTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| CDS-3UTR TCA 90 bp | CAGACACATCATTATGGCTTAGTCCCACCCCACGAGATCGTTCCAAATGACTGCGGTCCAAAGAAGCTTTaGCCACAAGGTATCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTHHYGLVPPHEIVPNDCGPKKL*PQGIQF Trigger: GAACTGGATACCTTGTGGTCAAAGCTTCTTTGGACC...GCAGTCATTTGGAACGATCTCGTGGGGTGGGACTAAGCCATAATGATGTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| CDS-3UTR CCA 90 bp | CAGACACATCATTATGGCTTAGTCCCACCCCACGAGATCGTTCCAAATGACTGCCAGCTCTTTCTTCACTaGCTTTTTCCGGTATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTHHYGLVPPHEIVPNDCQLFLH*LFPVCL Trigger: CAGACATACCGGAAAAAGCCAGTGAAGAAAGAGCTG...GCAGTCATTTGGAACGATCTCGTGGGGTGGGACTAAGCCATAATGATGTGTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| CDS-3UTR CCA 90 bp | GACTCCTGGCTTGAGAGGGGAAAGGGTTTTGCTGGATTCTGTCTTGCTAAGGATGAGTACATGAGAATGTaGATAAAGCTGTTCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSWLERGKGFAGFCLAKDEYMRM*IKLFRV Trigger: CACCCTGAACAGCTTTATCCACATTCTCATGTACTC...ATCCTTAGCAAGACAGAATCCAGCAAAACCCTTTCCCCTCTCAAGCCAGGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAGTCTGTTCAACAGGAATGACAGACATGGCACAGGACATCGGACTGTGGAGTACATGAGAATGTaGATAAAGCTGTTCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKSLFNRNDRHGTGHRTVEYMRM*IKLFRV Trigger: CACCCTGAACAGCTTTATCCACATTCTCATGTACTC...CACAGTCCGATGTCCTGTGCCATGTCTGTCATTCCTGTTGAACAGACTCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS-3UTR CCA 90 bp | GGATGCCAATTGAAACAGAGACAGCTCTGTTCAAAGCCCCTGAGTTATGATTTGAAAGGTACTTGTGCATaGACGGGAACACAGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: GCQLKQRQLCSKPLSYDLKGTCA*TGTQTG Trigger: GCCTGTCTGTGTTCCCGTCCATGCACAAGTACCTTT...CAAATCATAACTCAGGGGCTTTGAACAGAGCTGTCTCTGTTTCAATTGGCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS-3UTR CCA 90 bp | GACTCCTGGCTTGAGAGGGGAAAGGGTTTTGCTGGATTCTGTCTTGCTAAGGATTTAGCCACAATTAAGTaGGCTTTGGGGAAACCATTC | + |
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Preference number: 4 (lower is better) Translates to: DSWLERGKGFAGFCLAKDLATIK*ALGKPF Trigger: GAATGGTTTCCCCAAAGCCCACTTAATTGTGGCTAA...ATCCTTAGCAAGACAGAATCCAGCAAAACCCTTTCCCCTCTCAAGCCAGGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR CAA 72 bp | ATGCGAAGAAGAACTGCAATTGGACAACTCCAGCCTTaGTTCAGAAAGGGCATGGCAGCTGTATGTAGACAC | + |
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Preference number: 4 (lower is better) Translates to: MRRRTAIGQLQP*FRKGMAAVCRH Trigger: GTGTCTACATACAGCTGCCATGCCCTTTCTGAACAAAGGCTGGAGTTGTCCAATTGCAGTTCTTCTTCGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR CAA 72 bp | TGCGCTGGGTGCCAGTGCCATGAACCAAGAACACATTaGCTGAAATGGAGGGGAAATAGAGTAAGTTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: CAGCQCHEPRTH*LKWRGNRVSCV Trigger: AACACAACTTACTCTATTTCCCCTCCATTTCAGCAAATGTGTTCTTGGTTCATGGCACTGGCACCCAGCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR CAA 72 bp | AGGTCTAAAGCTGGCTGGTACTGTGAGCTGCCACTGTaGATCTGCTATAGGAAGATAACACCCTTTGTGCTA | + |
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Preference number: 4 (lower is better) Translates to: RSKAGWYCELPL*ICYRKITPFVL Trigger: TAGCACAAAGGGTGTTATCTTCCTATAGCAGATCAACAGTGGCAGCTCACAGTACCAGCCAGCTTTAGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS-3UTR GCA 90 bp | GACTCCTGGCTTGAGAGGGGAAAGGGTTTTGCTGGATTCTGTCTTGCTAAGGATAGAAAGAAGTGTGATTaGGAGGTTATACAAGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: DSWLERGKGFAGFCLAKDRKKCD*EVIQGE Trigger: CTCACCTTGTATAACCTCGCAATCACACTTCTTTCT...ATCCTTAGCAAGACAGAATCCAGCAAAACCCTTTCCCCTCTCAAGCCAGGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS-3UTR TCA 90 bp | GCTGCTGCCTTAAGCAACAGCAGACTAATCGATTTATGCACTGACAGTTATTGCAGTTTAAGAACAGGATaGCCAGCGTCATCATATAGG | + |
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Preference number: 4 (lower is better) Translates to: AAALSNSRLIDLCTDSYCSLRTG*PASSYR Trigger: CCTATATGATGACGCTGGTCATCCTGTTCTTAAACT...GCAATAACTGTCAGTGCATAAATCGATTAGTCTGCTGTTGCTTAAGGCAGCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| 3UTR CAA 72 bp | ATTCCAATTGCATTTCTATGCGAAGAAGAACTGCAATaGGACAACTCCAGCCTTTGTTCAGAAAGGGCATGG | + |
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Preference number: 4 (lower is better) Translates to: IPIAFLCEEELQ*DNSSLCSERAW Trigger: CCATGCCCTTTCTGAACAAAGGCTGGAGTTGTCCAATTGCAGTTCTTCTTCGCATAGAAATGCAATTGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS-3UTR TCA 90 bp | ACACATTTGCTGAAATGGAGGGGAAATAGAGTAAGTTGTGTTTTGTGTATGTTTGGTCCAAAGAAGCTTTaGCCACAAGGTATCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: THLLKWRGNRVSCVLCMFGPKKL*PQGIQF Trigger: GAACTGGATACCTTGTGGTCAAAGCTTCTTTGGACC...AAACATACACAAAACACAACTTACTCTATTTCCCCTCCATTTCAGCAAATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS-3UTR CCA 90 bp | ATGAATAAAAGGGAATTCACTTGGGAAAAGACGGTTTCCTATCAGATTATAGAGCAATTAAGTGGGCTTTaGGGAAACCATTCTTCACTT | + |
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Preference number: 4 (lower is better) Translates to: MNKREFTWEKTVSYQIIEQLSGL*GNHSSL Trigger: AAGTGAAGAATGGTTTCCCCAAAGCCCACTTAATTG...CTCTATAATCTGATAGGAAACCGTCTTTTCCCAAGTGAATTCCCTTTTATTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS GCA 90 bp | GGAGAGGATGAGCTCCACCAGCATATACGCAGAAAGAAGTGTGATTaGGAGGTTATACAAGGTGAGGATGCCCCTGAGAGACAGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GEDELHQHIRRKKCD*EVIQGEDAPERQSR Trigger: CCTGCTCTGTCTCTCAGGGGCATCCTCACCTTGTATAACCTCGCAATCACACTTCTTTCTGCGTATATGCTGGTGGAGCTCATCCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS GCA 90 bp | GTAGTACCACCACAAGACCTTGGCTACCCGGACATCACCTTCTCCTaGACTGTCGAGATTCTGACACTGCAAGTTGTAACCTCCTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: VVPPQDLGYPDITFS*TVEILTLQVVTSFP Trigger: TGGGAAGGAGGTTACAACTTGCAGTGTCAGAATCTCGACAGTGCAGGAGAAGGTGATGTCCGGGTAGCCAAGGTCTTGTGGTGGTACTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS-3UTR CAA 90 bp | AGCAGGCTCAGCAACTGCTTGCAATGGTGTTCACCAGCAGGCTCAGCAGCAACACGTGGTCCAAACATGTaGTCCAAGAAAGCATTGACT | + |
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Preference number: 5 (lower is better) Translates to: SRLSNCLQWCSPAGSAATRGPNM*SKKALT Trigger: AGTCAATGCTTTCTTGGACAACATGTTTGGACCACG...TGTTGCTGCTGAGCCTGCTGGTGAACACCATTGCAAGCAGTTGCTGAGCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021793.15 |
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| CDS CCA 90 bp | AAGGTAAGAGTCCAGCAGGAACCACCCGCGAACTCGAGAATCTCGTaGTCCAAACATGTTGTCCAAGAAAGCATTGACTTCATTATCAAA | + |
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Preference number: 5 (lower is better) Translates to: KVRVQQEPPANSRIS*SKHVVQESIDFIIK Trigger: TTTGATAATGAAGTCAATGCTTTCTTGGACAACATGTTTGGACCACGAGATTCTCGAGTTCGCGGGTGGTTCCTGCTGGACTCTTACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021793.15 |
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| CDS-3UTR CAA 90 bp | GCTGCTGCCTTAAGCAACAGCAGACTAATCGATTTATGCACTGACAGTTATTGCTTGTCCAAGAAAGCATaGACTTCATTATCAAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: AAALSNSRLIDLCTDSYCLSKKA*TSLSKA Trigger: GGCCTTTGATAATGAAGTCAATGCTTTCTTGGACAA...GCAATAACTGTCAGTGCATAAATCGATTAGTCTGCTGTTGCTTAAGGCAGCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021793.15 |
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| CDS-3UTR CAA 90 bp | ATGAATAAAAGGGAATTCACTTGGGAAAAGACGGTTTCCTATCAGATTATAGAGGGGTCCAAAGAAGCTTaGACCACAAGGTATCCAGTT | + |
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Preference number: 5 (lower is better) Translates to: MNKREFTWEKTVSYQIIEGSKEA*TTRYPV Trigger: AACTGGATACCTTGTGGTCAAAGCTTCTTTGGACCC...CTCTATAATCTGATAGGAAACCGTCTTTTCCCAAGTGAATTCCCTTTTATTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS-3UTR CAA 90 bp | ACACATTTGCTGAAATGGAGGGGAAATAGAGTAAGTTGTGTTTTGTGTATGTTTCTGTTCTTCATGTACTaGTTACCCAGCCATATCGAG | + |
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Preference number: 5 (lower is better) Translates to: THLLKWRGNRVSCVLCMFLFFMY*LPSHIE Trigger: CTCGATATGGCTGGGTAACAAGTACATGAAGAACAG...AAACATACACAAAACACAACTTACTCTATTTCCCCTCCATTTCAGCAAATGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS-3UTR CAA 90 bp | ATGAATAAAAGGGAATTCACTTGGGAAAAGACGGTTTCCTATCAGATTATAGAGCTGTTCTTCATGTACTaGTTACCCAGCCATATCGAG | + |
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Preference number: 5 (lower is better) Translates to: MNKREFTWEKTVSYQIIELFFMY*LPSHIE Trigger: CTCGATATGGCTGGGTAACAAGTACATGAAGAACAG...CTCTATAATCTGATAGGAAACCGTCTTTTCCCAAGTGAATTCCCTTTTATTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS-3UTR CAA 90 bp | ACACATTTGCTGAAATGGAGGGGAAATAGAGTAAGTTGTGTTTTGTGTATGTTTACAATTAAGTGGGCTTaGGGGAAACCATTCTTCACT | + |
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Preference number: 5 (lower is better) Translates to: THLLKWRGNRVSCVLCMFTIKWA*GKPFFT Trigger: AGTGAAGAATGGTTTCCCCAAAGCCCACTTAATTGT...AAACATACACAAAACACAACTTACTCTATTTCCCCTCCATTTCAGCAAATGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS CAA 90 bp | GTGAGGATGCCCCTGAGAGACAGAGCAGGCCTGTTCTTCATGTACTaGTTACCCAGCCATATCGAGAGCAGGTACGTGATGGTGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: VRMPLRDRAGLFFMY*LPSHIESRYVMVRM Trigger: CATCCTCACCATCACGTACCTGCTCTCGATATGGCTGGGTAACAAGTACATGAAGAACAGGCCTGCTCTGTCTCTCAGGGGCATCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS GCA 72 bp | CCACAAGACCTTGGCTACCCGGACATCACCTTCTCCTaGACTGTCGAGATTCTGACACTGCAAGTTGTAACC | + |
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Preference number: 6 (lower is better) Translates to: PQDLGYPDITFS*TVEILTLQVVT Trigger: GGTTACAACTTGCAGTGTCAGAATCTCGACAGTGCAGGAGAAGGTGATGTCCGGGTAGCCAAGGTCTTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS CAA 72 bp | CCCCTGAGAGACAGAGCAGGCCTGTTCTTCATGTACTaGTTACCCAGCCATATCGAGAGCAGGTACGTGATG | + |
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Preference number: 6 (lower is better) Translates to: PLRDRAGLFFMY*LPSHIESRYVM Trigger: CATCACGTACCTGCTCTCGATATGGCTGGGTAACAAGTACATGAAGAACAGGCCTGCTCTGTCTCTCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS CCA 72 bp | GTCCAGCAGGAACCACCCGCGAACTCGAGAATCTCGTaGTCCAAACATGTTGTCCAAGAAAGCATTGACTTC | + |
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Preference number: 6 (lower is better) Translates to: VQQEPPANSRIS*SKHVVQESIDF Trigger: GAAGTCAATGCTTTCTTGGACAACATGTTTGGACCACGAGATTCTCGAGTTCGCGGGTGGTTCCTGCTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021793.15 |
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| CDS GCA 72 bp | GAGCTCCACCAGCATATACGCAGAAAGAAGTGTGATTaGGAGGTTATACAAGGTGAGGATGCCCCTGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: ELHQHIRRKKCD*EVIQGEDAPER Trigger: TCTCTCAGGGGCATCCTCACCTTGTATAACCTCGCAATCACACTTCTTTCTGCGTATATGCTGGTGGAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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| CDS CAA 90 bp | AGCAGGAACCACCCGCGAACTCGAGAATCTCGTGGTCCAAACATGTaGTCCAAGAAAGCATTGACTTCATTATCAAAGGCCTTCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SRNHPRTRESRGPNM*SKKALTSLSKAFSC Trigger: GCAGCTGAAGGCCTTTGATAATGAAGTCAATGCTTTCTTGGACAACATGTTTGGACCACGAGATTCTCGAGTTCGCGGGTGGTTCCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021793.15 |
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| CDS CAA 72 bp | TTGTCCGTCATGCCATTAGCCACAATTAAGTGGGCTTaGGGGAAACCATTCTTCACTTCTTTCTCTTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LSVMPLATIKWA*GKPFFTSFSCS Trigger: GCTGCAAGAGAAAGAAGTGAAGAATGGTTTCCCCAAAGCCCACTTAATTGTGGCTAATGGCATGACGGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021793.15 ENSMUST00000117096.2 |
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