Pregenerated sensors for ELOVL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006390Ensembl transcript IDs: ENSMUST00000006557.13, ENSMUST00000067896.4, ENSMUST00000102673.11, ENSMUST00000167636.8
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCTGGGAGAAGGGATGGGAACAGTGGCCCCTGTGGACCAGCTGTaGGGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAG | + |
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Preference number: 1 (lower is better) Translates to: WLGEGMGTVAPVDQL*GGESQSACSVLTTE Trigger: CTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCCCCACAGCTGGTCCACAGGGGCCACTGTTCCCATCCCTTCTCCCAGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR GCA 90 bp | AGAGCCCTGGTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCTaGCCAAGGTGCAGTCCTGAGGCACTTAGGTGGGCAATGTCTAGG | + |
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Preference number: 1 (lower is better) Translates to: RALVTGVGREDTCGC*PRCSPEALRWAMSR Trigger: CCTAGACATTGCCCACCTAAGTGCCTCAGGACTGCACCTTGGGCAGCATCCACAAGTGTCCTCTCTACCTACACCCGTGACCAGGGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR GCA 90 bp | CACAGAGCCCTGGTCACGGGTGTAGGTAGAGAGGACACTTGTGGATaGTGCCCAAGGTGCAGTCCTGAGGCACTTAGGTGGGCAATGTCT | + |
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Preference number: 1 (lower is better) Translates to: HRALVTGVGREDTCG*CPRCSPEALRWAMS Trigger: AGACATTGCCCACCTAAGTGCCTCAGGACTGCACCTTGGGCAGCATCCACAAGTGTCCTCTCTACCTACACCCGTGACCAGGGCTCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR GCA 90 bp | ATTGCTGACCTCTTCAGTGTGAGGAGAAAGGCCACAAGACCCGGGTaGGTGCCGGCCAGCCCTGAGTGTTCCTCTCCCAAGTTTAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: IADLFSVRRKATRPG*VPASPECSSPKFKA Trigger: TGCCTTAAACTTGGGAGAGGAACACTCAGGGCTGGCCGGCACGCACCCGGGTCTTGTGGCCTTTCTCCTCACACTGAAGAGGTCAGCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 |
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| 3UTR GCA 90 bp | ACTTTAATTAAGACACAAGTGAGCGCACAGCCTGACTTCCAGGCCTaGTGCCTGCCCATTCTGACCTTTGGCCCGAAGCTCATGCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: TLIKTQVSAQPDFQA*CLPILTFGPKLMLP Trigger: TGGAAGCATGAGCTTCGGGCCAAAGGTCAGAATGGGCAGGCAGCAGGCCTGGAAGTCAGGCTGTGCGCTCACTTGTGTCTTAATTAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 |
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| 3UTR-3UTR CCA 90 bp | GCCACAAGACCCGGGTGCGTGCCGGCCAGCCCTGAGTGTTCCTCTCCCAAGTTTCCTGTGGACCAGCTGTaGGGAGGGGAGAGCCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: ATRPGCVPASPECSSPKFPVDQL*GGESQS Trigger: GGACTGGCTCTCCCCTCCCCACAGCTGGTCCACAGG...AAACTTGGGAGAGGAACACTCAGGGCTGGCCGGCACGCACCCGGGTCTTGTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 |
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| 3UTR-3UTR CCA 90 bp | CCGGGTGCGTGCCGGCCAGCCCTGAGTGTTCCTCTCCCAAGTTTAAGGCAGGGAGAACAGTGGCCCCTGTaGACCAGCTGTGGGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: PGACRPALSVPLPSLRQGEQWPL*TSCGEG Trigger: CCCCTCCCCACAGCTGGTCCACAGGGGCCACTGTTC...TCCCTGCCTTAAACTTGGGAGAGGAACACTCAGGGCTGGCCGGCACGCACCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR-3UTR TCA 90 bp | CCGGGTGCGTGCCGGCCAGCCCTGAGTGTTCCTCTCCCAAGTTTAAGGCAGGGAGGTGGCAGACAGCAGTaGGGCCACATCCCTGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: PGACRPALSVPLPSLRQGGGRQQ*GHIPGA Trigger: AGCTCCAGGGATGTGGCCTCACTGCTGTCTGCCACC...TCCCTGCCTTAAACTTGGGAGAGGAACACTCAGGGCTGGCCGGCACGCACCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTGCGTGCCGGCCAGCCCTGAGTGTTCCTCTCCCAAGTTTAAGGCAGGGAGGGAGAGCCAGTCCGCCTaGTCAGTCCTGACCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: GCVPASPECSSPKFKAGRESQSA*SVLTTE Trigger: CTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTC...CCTCCCTGCCTTAAACTTGGGAGAGGAACACTCAGGGCTGGCCGGCACGCACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGCTGGGAGAAGGGATGGGAACAGTGGCCCCTGTGGACCAGCTGTGGGGAGAGAGCCAGTCCGCCTaGTCAGTCCTGACCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: SWLGEGMGTVAPVDQLWGESQSA*SVLTTE Trigger: CTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTC...TCCCCACAGCTGGTCCACAGGGGCCACTGTTCCCATCCCTTCTCCCAGCCAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAGCGCACAGCCTGACTTCCAGGCCTGCTGCCTGCCCATTCTGACCCGGGTGAGCCTCCAGTTCTGGTaGCAGACAGCAGTGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: VSAQPDFQACCLPILTRVSLQFW*QTAVRP Trigger: TGGCCTCACTGCTGTCTGCCACCAGAACTGGAGGCT...CACCCGGGTCAGAATGGGCAGGCAGCAGGCCTGGAAGTCAGGCTGTGCGCTCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167636.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGCTGGGAGAAGGGATGGGAACAGTGGCCCCTGTGGACCAGCTGTGGGGAGGATGCTGCCCAAGGTaGAGTCCTGAGGCACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: SWLGEGMGTVAPVDQLWGGCCPR*SPEALR Trigger: CCTAAGTGCCTCAGGACTGCACCTTGGGCAGCATCC...TCCCCACAGCTGGTCCACAGGGGCCACTGTTCCCATCCCTTCTCCCAGCCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCACGGGTCCTGAGGCACTTAGGTaGGCAATGTCTAGGCCATGC | + |
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Preference number: 2 (lower is better) Translates to: RGEPVRLLSPDHRALVTGPEALR*AMSRPC Trigger: GCATGGCCTAGACATTGCCCACCTAAGTGCCTCAGG...ACCCGTGACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCCCAGGAGCTGGAATTACCGCATGCACTACCACCCATCCCTTTTGTTTGGGTGGCAGACAGCAGTaGGGCCACATCCCTGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: PSPGAGITACTTTHPFCLGGRQQ*GHIPGA Trigger: AGCTCCAGGGATGTGGCCTCACTGCTGTCTGCCACC...CAAACAAAAGGGATGGGTGGTAGTGCATGCGGTAATTCCAGCTCCTGGGGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
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| 3UTR-3UTR GCA 90 bp | AAGACACAAGTGAGCGCACAGCCTGACTTCCAGGCCTGCTGCCTGCCCATTCTGGGATGCTGCCCAAGGTaGAGTCCTGAGGCACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: KTQVSAQPDFQACCLPILGCCPR*SPEALR Trigger: CCTAAGTGCCTCAGGACTGCACCTTGGGCAGCATCC...CAGAATGGGCAGGCAGCAGGCCTGGAAGTCAGGCTGTGCGCTCACTTGTGTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTGAGTGTTCCTCTCCCAAGTTTAAGGCAGGGAGGGGGAAGTAAGTGTCCAGTGAGGCCACATCCCTaGAGCTGGCTGGGAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: ALSVPLPSLRQGGGSKCPVRPHP*SWLGEG Trigger: CCCTTCTCCCAGCCAGCTCCAGGGATGTGGCCTCAC...TGGACACTTACTTCCCCCTCCCTGCCTTAAACTTGGGAGAGGAACACTCAGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCTGCCTGCCCATTCTGACCTTTGGCCCGAAGCTCATGCTTCCATGTGGAAGCCTCCAGTTCTGGTaGCAGACAGCAGTGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: ACCLPILTFGPKLMLPCGSLQFW*QTAVRP Trigger: TGGCCTCACTGCTGTCTGCCACCAGAACTGGAGGCT...TCCACATGGAAGCATGAGCTTCGGGCCAAAGGTCAGAATGGGCAGGCAGCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 |
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| 3UTR-3UTR TCA 90 bp | TTTGTACCCTCCCCAGGAGCTGGAATTACCGCATGCACTACCACCCATCCCTTTCGTGCCGGCCAGCCCTaGGTGTTCCTCTCCCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: FVPSPGAGITACTTTHPFRAGQP*VFLSQV Trigger: AACTTGGGAGAGGAACACTCAGGGCTGGCCGGCACG...AAAGGGATGGGTGGTAGTGCATGCGGTAATTCCAGCTCCTGGGGAGGGTACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
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| 3UTR-3UTR CCA 90 bp | TTTGGCCCGAAGCTCATGCTTCCATGTGGAGTGAGAAGGGAGCCTGAGTCCACACCACATCCCTGGAGCTaGCTGGGAGAAGGGATGGGA | + |
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Preference number: 2 (lower is better) Translates to: FGPKLMLPCGVRREPESTPHPWS*LGEGMG Trigger: TCCCATCCCTTCTCCCAGCCAGCTCCAGGGATGTGG...TGTGGACTCAGGCTCCCTTCTCACTCCACATGGAAGCATGAGCTTCGGGCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGCCTGCCCATTCTGACCTTTGGCCCGAAGCTCATGCTTCCATGTGGAGTTTCAGCCTCCAGTTCTaGTGGCAGACAGCAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LLPAHSDLWPEAHASMWSFSLQF*WQTAVR Trigger: CCTCACTGCTGTCTGCCACCAGAACTGGAGGCTGAA...ACTCCACATGGAAGCATGAGCTTCGGGCCAAAGGTCAGAATGGGCAGGCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 |
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| 3UTR-3UTR GCA 90 bp | AGTGTTCCTCTCCCAAGTTTAAGGCAGGGAGGGGGAAGTAAGTGTCCAGCCCTTGGATGCTGCCCAAGGTaGAGTCCTGAGGCACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: SVPLPSLRQGGGSKCPALGCCPR*SPEALR Trigger: CCTAAGTGCCTCAGGACTGCACCTTGGGCAGCATCC...AAGGGCTGGACACTTACTTCCCCCTCCCTGCCTTAAACTTGGGAGAGGAACACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCCCAGGAGCTGGAATTACCGCATGCACTACCACCCATCCCTTTTGTTTGCCTGAGGCACTTAGGTaGGCAATGTCTAGGCCATGC | + |
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Preference number: 2 (lower is better) Translates to: PSPGAGITACTTTHPFCLPEALR*AMSRPC Trigger: GCATGGCCTAGACATTGCCCACCTAAGTGCCTCAGG...CAAACAAAAGGGATGGGTGGTAGTGCATGCGGTAATTCCAGCTCCTGGGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
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| 3UTR-3UTR CCA 90 bp | CCCGTCACTTTAATTAAGACACAAGTGAGCGCACAGCCTGACTTCCAGGCCTGCCCTGAGGCACTTAGGTaGGCAATGTCTAGGCCATGC | + |
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Preference number: 2 (lower is better) Translates to: PVTLIKTQVSAQPDFQACPEALR*AMSRPC Trigger: GCATGGCCTAGACATTGCCCACCTAAGTGCCTCAGG...GCAGGCCTGGAAGTCAGGCTGTGCGCTCACTTGTGTCTTAATTAAAGTGACGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTACCCTCCCCAGGAGCTGGAATTACCGCATGCACTACCACCCATCCCTTTTCACACACAATCTCAGTaGTTTCCCGTCACTTTAATT | + |
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Preference number: 2 (lower is better) Translates to: LYPPQELELPHALPPIPFHTQSQ*FPVTLI Trigger: AATTAAAGTGACGGGAAACCACTGAGATTGTGTGTG...AAAAGGGATGGGTGGTAGTGCATGCGGTAATTCCAGCTCCTGGGGAGGGTACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
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| 3UTR-3UTR TCA 90 bp | TATGTCCCAGCATCCTTCCTACATGCTTCCCCTACTCTGACTAGAGCTAGACTTGCATCATTTTTCTTTTaGGACAGGGTTCAGGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: YVPASFLHASPTLTRARLASFFF*DRVQAL Trigger: AAGAGCCTGAACCCTGTCTCAAAAGAAAAATGATGC...AAGTCTAGCTCTAGTCAGAGTAGGGGAAGCATGTAGGAAGGATGCTGGGACATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
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| 3UTR TCA 72 bp | CACAGCCTGACTTCCAGGCCTGCTGCCTGCCCATTCTaGCCCGGGTGCGTGCCGGCCAGCCCTGAGTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: HSLTSRPAACPF*PGCVPASPECS Trigger: GGAACACTCAGGGCTGGCCGGCACGCACCCGGGTCAGAATGGGCAGGCAGCAGGCCTGGAAGTCAGGCTGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167636.8 |
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| 3UTR CCA 72 bp | GAAGGGATGGGAACAGTGGCCCCTGTGGACCAGCTGTaGGGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: EGMGTVAPVDQL*GGESQSACSVL Trigger: CAGGACTGAGCAGGCGGACTGGCTCTCCCCTCCCCACAGCTGGTCCACAGGGGCCACTGTTCCCATCCCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR GCA 72 bp | CCAGGCCTGCTGCCTGCCCATTCTGACCCGGGTGCGTaGCGGCCAGCCCTGAGTGTTCCTCTCCCAAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: PGLLPAHSDPGA*RPALSVPLPSL Trigger: TAAACTTGGGAGAGGAACACTCAGGGCTGGCCGGCACGCACCCGGGTCAGAATGGGCAGGCAGCAGGCCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167636.8 |
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| 3UTR GCA 72 bp | AAGACACAAGTGAGCGCACAGCCTGACTTCCAGGCCTaGTGCCTGCCCATTCTGACCCGGGTGCGTGCCGGC | + |
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Preference number: 3 (lower is better) Translates to: KTQVSAQPDFQA*CLPILTRVRAG Trigger: GCCGGCACGCACCCGGGTCAGAATGGGCAGGCAGCAGGCCTGGAAGTCAGGCTGTGCGCTCACTTGTGTCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167636.8 |
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| 3UTR GCA 72 bp | CTCTTCAGTGTGAGGAGAAAGGCCACAAGACCCGGGTaGGTGCCGGCCAGCCCTGAGTGTTCCTCTCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: LFSVRRKATRPG*VPASPECSSPK Trigger: CTTGGGAGAGGAACACTCAGGGCTGGCCGGCACGCACCCGGGTCTTGTGGCCTTTCTCCTCACACTGAAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 |
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| 3UTR GCA 72 bp | AAGACACAAGTGAGCGCACAGCCTGACTTCCAGGCCTaGTGCCTGCCCATTCTGACCTTTGGCCCGAAGCTC | + |
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Preference number: 3 (lower is better) Translates to: KTQVSAQPDFQA*CLPILTFGPKL Trigger: GAGCTTCGGGCCAAAGGTCAGAATGGGCAGGCAGCAGGCCTGGAAGTCAGGCTGTGCGCTCACTTGTGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 |
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| 3UTR GCA 72 bp | CTGGTCACGGGTGTAGGTAGAGAGGACACTTGTGGATaGTGCCCAAGGTGCAGTCCTGAGGCACTTAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: LVTGVGREDTCG*CPRCSPEALRW Trigger: CCACCTAAGTGCCTCAGGACTGCACCTTGGGCAGCATCCACAAGTGTCCTCTCTACCTACACCCGTGACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR TCA 72 bp | GTCCACAGTGACAGATTATTGCTGACCTCTTCAGTGTaGGGAGAAAGGCCACAAGACCCGGGTGCGTGCCGG | + |
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Preference number: 3 (lower is better) Translates to: VHSDRLLLTSSV*GERPQDPGACR Trigger: CCGGCACGCACCCGGGTCTTGTGGCCTTTCTCCTCACACTGAAGAGGTCAGCAATAATCTGTCACTGTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 |
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| 3UTR TCA 72 bp | AGAAGGGAGCCTGAGTCCACAGTGACAGATTATTGCTaGCCTCTTCAGTGTGAGGAGAAAGGCCACAAGACC | + |
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Preference number: 3 (lower is better) Translates to: RREPESTVTDYC*PLQCEEKGHKT Trigger: GGTCTTGTGGCCTTTCTCCTCACACTGAAGAGGTCAGCAATAATCTGTCACTGTGGACTCAGGCTCCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 |
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| 3UTR TCA 72 bp | GAAGCTCATGCTTCCATGTGGAGTGAGAAGGGAGCCTaGGTCCACAGTGACAGATTATTGCTGACCTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: EAHASMWSEKGA*VHSDRLLLTSS Trigger: TGAAGAGGTCAGCAATAATCTGTCACTGTGGACTCAGGCTCCCTTCTCACTCCACATGGAAGCATGAGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 |
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| 3UTR-3UTR CAA 90 bp | TATGTCCCAGCATCCTTCCTACATGCTTCCCCTACTCTGACTAGAGCTAGACTTAGCATCATTTTTCTTTaGAGACAGGGTTCAGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: YVPASFLHASPTLTRARLSIIFL*RQGSGS Trigger: AGAGCCTGAACCCTGTCTCAAAAGAAAAATGATGCT...AAGTCTAGCTCTAGTCAGAGTAGGGGAAGCATGTAGGAAGGATGCTGGGACATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
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| 3UTR CCA 72 bp | GTCCCGCACCTCATTTACACACACACACAATCTCAGTaGTTTCCCGTCACTTTAATTAAGACACAAGTGAGC | + |
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Preference number: 3 (lower is better) Translates to: VPHLIYTHTQSQ*FPVTLIKTQVS Trigger: GCTCACTTGTGTCTTAATTAAAGTGACGGGAAACCACTGAGATTGTGTGTGTGTGTAAATGAGGTGCGGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
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| CDS-3UTR TCA 90 bp | GGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCACGGGTGGGAGCTCCATTTTGCTaGACTGCACGGGGCAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GESQSACSVLTTEPWSRVGAPFC*TARGSR Trigger: GCGGCTGCCCCGTGCAGTTCAGCAAAATGGAGCTCC...CACCCGTGACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR TCA 90 bp | AGCTGGCTGGGAGAAGGGATGGGAACAGTGGCCCCTGTGGACCAGCTGTGGGGAGGAGCTCCATTTTGCTaGACTGCACGGGGCAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SWLGEGMGTVAPVDQLWGGAPFC*TARGSR Trigger: GCGGCTGCCCCGTGCAGTTCAGCAAAATGGAGCTCC...TCCCCACAGCTGGTCCACAGGGGCCACTGTTCCCATCCCTTCTCCCAGCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | GTGGGGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCGAGTGGTGGAAGACATaGAGGAAGGTCACTTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: VGRGEPVRLLSPDHRALVEWWKT*RKVTCP Trigger: CGGGCAAGTGACCTTCCTCCATGTCTTCCACCACTC...GACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | GGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCACGGGTGGGAAGCACCGAGTGGTaGAAGACATGGAGGAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: GESQSACSVLTTEPWSRVGSTEW*KTWRKV Trigger: GACCTTCCTCCATGTCTTCCACCACTCGGTGCTTCC...CACCCGTGACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | GGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCACGGGCAGCCGCTTCCCCTTaGTGTAAGAGTGATACCAGA | + |
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Preference number: 4 (lower is better) Translates to: GGESQSACSVLTTEPWSRAAASP*CKSDTR Trigger: TCTGGTATCACTCTTACACCAAGGGGAAGCGGCTGC...CCGTGACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR TCA 90 bp | GGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCACGGTTGGCTGATGTGCAGTaGGACCAGGACAAACTGGAT | + |
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Preference number: 4 (lower is better) Translates to: GGESQSACSVLTTEPWSRLADVQ*DQDKLD Trigger: ATCCAGTTTGTCCTGGTCTCACTGCACATCAGCCAA...CCGTGACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR TCA 90 bp | CCTGACCACAGAGCCCTGGTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCGGAGCTCCATTTTGCTaGACTGCACGGGGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PDHRALVTGVGREDTCGCGAPFC*TARGSR Trigger: GCGGCTGCCCCGTGCAGTTCAGCAAAATGGAGCTCC...GCATCCACAAGTGTCCTCTCTACCTACACCCGTGACCAGGGCTCTGTGGTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCATGAAGCCTCGAAGTTaGAAGGGCTTCCGATTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGRGEPVRLLSPDHRALVMKPRS*KGFRLA Trigger: GGCTAATCGGAAGCCCTTCCAACTTCGAGGCTTCAT...GACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | GGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCACGGGTGATGAAGCCTCGAAGTTaGAAGGGCTTCCGATTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GESQSACSVLTTEPWSRVMKPRS*KGFRLA Trigger: GGCTAATCGGAAGCCCTTCCAACTTCGAGGCTTCAT...CACCCGTGACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGCTGGGAGAAGGGATGGGAACAGTGGCCCCTGTGGACCAGCTGTGGGGAGAGTGGTGGAAGACATaGAGGAAGGTCACTTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SWLGEGMGTVAPVDQLWGEWWKT*RKVTCP Trigger: CGGGCAAGTGACCTTCCTCCATGTCTTCCACCACTC...TCCCCACAGCTGGTCCACAGGGGCCACTGTTCCCATCCCTTCTCCCAGCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGCTGGGAGAAGGGATGGGAACAGTGGCCCCTGTGGACCAGCTGTGGGGAGGAAGCACCGAGTGGTaGAAGACATGGAGGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SWLGEGMGTVAPVDQLWGGSTEW*KTWRKV Trigger: GACCTTCCTCCATGTCTTCCACCACTCGGTGCTTCC...TCCCCACAGCTGGTCCACAGGGGCCACTGTTCCCATCCCTTCTCCCAGCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGTGGGGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCGGAGCCCATTCCTCCTaGAGCAATTTTTATCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLWGGESQSACSVLTTEPGAHSS*SNFYPP Trigger: TGGGGGATAAAAATTGCTCCAGGAGGAATGGGCTCC...GGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCCCCACAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | AGCGCACAGCCTGACTTCCAGGCCTGCTGCCTGCCCATTCTGACCCGGGTGCGTGCAGCCGCTTCCCCTTaGTGTAAGAGTGATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SAQPDFQACCLPILTRVRAAASP*CKSDTR Trigger: TCTGGTATCACTCTTACACCAAGGGGAAGCGGCTGC...ACGCACCCGGGTCAGAATGGGCAGGCAGCAGGCCTGGAAGTCAGGCTGTGCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | GGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCACGGGTGGACCTTGGTGGTAGCTaGAGCTCCATTTTGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GESQSACSVLTTEPWSRVDLGGS*SSILLN Trigger: GTTCAGCAAAATGGAGCTCCAGCTACCACCAAGGTC...CACCCGTGACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCACGGTATTGGAAAAGTCTATaGGGTCACAGCGCCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGESQSACSVLTTEPWSRYWKSL*GHSARC Trigger: ACACCTGGCGCTGTGACCCCATAGACTTTTCCAATA...CCGTGACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGTGGGGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTATTGGAAAAGTCTATaGGGTCACAGCGCCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLWGGESQSACSVLTTEPYWKSL*GHSARC Trigger: ACACCTGGCGCTGTGACCCCATAGACTTTTCCAATA...GGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCCCCACAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCTATTGGAAAAGTCTATaGGGTCACAGCGCCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGRGEPVRLLSPDHRALVYWKSL*GHSARC Trigger: ACACCTGGCGCTGTGACCCCATAGACTTTTCCAATA...GACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCGAGTTTATCATGGCATaGAAGGAGCCCATTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGRGEPVRLLSPDHRALVEFIMA*KEPIPP Trigger: AGGAGGAATGGGCTCCTTCCATGCCATGATAAACTC...GACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCCAGAGGAGTTTATCATaGCATGGAAGGAGCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VGRGEPVRLLSPDHRALVQRSLS*HGRSPF Trigger: GAATGGGCTCCTTCCATGCCATGATAAACTCCTCTG...GACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | CTGTGGGGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTACATCCAGATGAGGTaGATGATGATGGGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWGGESQSACSVLTTEPWYIQMR*MMMGYW Trigger: CCAGTACCCCATCATCATCCACCTCATCTGGATGTA...CCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCCCCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR TCA 90 bp | AGCTGGCTGGGAGAAGGGATGGGAACAGTGGCCCCTGTGGACCAGCTGTGGGGATTGGCTGATGTGCAGTaGGACCAGGACAAACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SWLGEGMGTVAPVDQLWGLADVQ*DQDKLD Trigger: ATCCAGTTTGTCCTGGTCTCACTGCACATCAGCCAA...TCCCCACAGCTGGTCCACAGGGGCCACTGTTCCCATCCCTTCTCCCAGCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCACGGTCGAACCATCCGAAGTaGTTCAGGGCTATTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GGESQSACSVLTTEPWSRSNHPK*FRAIGK Trigger: TTTTCCAATAGCCCTGAAGCACTTCGGATGGTTCGA...CCGTGACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR GCA 90 bp | CACAGAGCCCTGGTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCTGCCCATGGAGGAAGGTCACTTaGCCGTCCTTCTTCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRALVTGVGREDTCGCCPWRKVT*PSFFRR Trigger: CCTCCGGAAGAAGGACGGGCAAGTGACCTTCCTCCA...TGGGCAGCATCCACAAGTGTCCTCTCTACCTACACCCGTGACCAGGGCTCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | CTGTGGGGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGCATAGGTCAGAAGGATaGATGTTATTAGCAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWGGESQSACSVLTTEPWHRSEG*MLLARG Trigger: CCCCCTTGCTAATAACATCCATCCTTCTGACCTATG...CCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCCCCACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | GGGTGCGTGCCGGCCAGCCCTGAGTGTTCCTCTCCCAAGTTTAAGGCAGGGAGGGACCTTGGTGGTAGCTaGAGCTCCATTTTGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GCVPASPECSSPKFKAGRDLGGS*SSILLN Trigger: GTTCAGCAAAATGGAGCTCCAGCTACCACCAAGGTC...CCTCCCTGCCTTAAACTTGGGAGAGGAACACTCAGGGCTGGCCGGCACGCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCACGGGTTCGAACCATCCGAAGTaGTTCAGGGCTATTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGEPVRLLSPDHRALVTGSNHPK*FRAIGK Trigger: TTTTCCAATAGCCCTGAAGCACTTCGGATGGTTCGA...ACCCGTGACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | CCTGACCACAGAGCCCTGGTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCGAGTGGTGGAAGACATaGAGGAAGGTCACTTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PDHRALVTGVGREDTCGCEWWKT*RKVTCP Trigger: CGGGCAAGTGACCTTCCTCCATGTCTTCCACCACTC...GCATCCACAAGTGTCCTCTCTACCTACACCCGTGACCAGGGCTCTGTGGTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | CCTGACCACAGAGCCCTGGTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCGGAAGCACCGAGTGGTaGAAGACATGGAGGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PDHRALVTGVGREDTCGCGSTEW*KTWRKV Trigger: GACCTTCCTCCATGTCTTCCACCACTCGGTGCTTCC...GCATCCACAAGTGTCCTCTCTACCTACACCCGTGACCAGGGCTCTGTGGTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | CAAGTGAGCGCACAGCCTGACTTCCAGGCCTGCTGCCTGCCCATTCTGACCCGGTACATCCAGATGAGGTaGATGATGATGGGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVSAQPDFQACCLPILTRYIQMR*MMMGYW Trigger: CCAGTACCCCATCATCATCCACCTCATCTGGATGTA...CCGGGTCAGAATGGGCAGGCAGCAGGCCTGGAAGTCAGGCTGTGCGCTCACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167636.8 |
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| CDS-3UTR TCA 90 bp | GGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCACGGGTGGGAGAGTATCACCAGTaGGAAATTGTAGACAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GESQSACSVLTTEPWSRVGEYHQ*EIVDNH Trigger: ATGATTGTCTACAATTTCTCACTGGTGATACTCTCC...CACCCGTGACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | GGGTGCGTGCCGGCCAGCCCTGAGTGTTCCTCTCCCAAGTTTAAGGCAGGGAGGCATAGGTCAGAAGGATaGATGTTATTAGCAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GCVPASPECSSPKFKAGRHRSEG*MLLARG Trigger: CCCCCTTGCTAATAACATCCATCCTTCTGACCTATG...CCTCCCTGCCTTAAACTTGGGAGAGGAACACTCAGGGCTGGCCGGCACGCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | CTGGTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCTGCCCAAGGTGCAGTGAGTGGTGGAAGACATaGAGGAAGGTCACTTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LVTGVGREDTCGCCPRCSEWWKT*RKVTCP Trigger: CGGGCAAGTGACCTTCCTCCATGTCTTCCACCACTC...ACTGCACCTTGGGCAGCATCCACAAGTGTCCTCTCTACCTACACCCGTGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | GTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCTGCCCAAGGTGCAGTCCTGGAAGCACCGAGTGGTaGAAGACATGGAGGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VTGVGREDTCGCCPRCSPGSTEW*KTWRKV Trigger: GACCTTCCTCCATGTCTTCCACCACTCGGTGCTTCC...AGGACTGCACCTTGGGCAGCATCCACAAGTGTCCTCTCTACCTACACCCGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | CCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCACGGGTGTAGGTAGACAGAGGAGTTTATCATaGCATGGAAGGAGCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PVRLLSPDHRALVTGVGRQRSLS*HGRSPF Trigger: GAATGGGCTCCTTCCATGCCATGATAAACTCCTCTG...TCTACCTACACCCGTGACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGCTGGGAGAAGGGATGGGAACAGTGGCCCCTGTGGACCAGCTGTGGGGAACTGGATCAGCTGAATaGCAGTCATATGTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SWLGEGMGTVAPVDQLWGTGSAE*QSYVSS Trigger: GGAAGAAACATATGACTGCCATTCAGCTGATCCAGT...TCCCCACAGCTGGTCCACAGGGGCCACTGTTCCCATCCCTTCTCCCAGCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | CTGGTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCTGCCCAAGGTGCAGTGCAGCCGCTTCCCCTTaGTGTAAGAGTGATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVTGVGREDTCGCCPRCSAAASP*CKSDTR Trigger: TCTGGTATCACTCTTACACCAAGGGGAAGCGGCTGC...ACTGCACCTTGGGCAGCATCCACAAGTGTCCTCTCTACCTACACCCGTGACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | GAGGGGGAAGTAAGTGTCCAGCCCTTTCAGCCTCCAGTTCTGGTGGCAGACAGCGACCTTGGTGGTAGCTaGAGCTCCATTTTGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EGEVSVQPFQPPVLVADSDLGGS*SSILLN Trigger: GTTCAGCAAAATGGAGCTCCAGCTACCACCAAGGTC...GCTGTCTGCCACCAGAACTGGAGGCTGAAAGGGCTGGACACTTACTTCCCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR TCA 90 bp | CCGGGTGCGTGCCGGCCAGCCCTGAGTGTTCCTCTCCCAAGTTTAAGGCAGGGAGGAGAGTATCACCAGTaGGAAATTGTAGACAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGACRPALSVPLPSLRQGGEYHQ*EIVDNH Trigger: ATGATTGTCTACAATTTCTCACTGGTGATACTCTCC...TCCCTGCCTTAAACTTGGGAGAGGAACACTCAGGGCTGGCCGGCACGCACCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000167636.8 |
||
| CDS-3UTR TCA 90 bp | TATGTCCCAGCATCCTTCCTACATGCTTCCCCTACTCTGACTAGAGCTAGACTTGGAGCTCCATTTTGCTaGACTGCACGGGGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: YVPASFLHASPTLTRARLGAPFC*TARGSR Trigger: GCGGCTGCCCCGTGCAGTTCAGCAAAATGGAGCTCC...AAGTCTAGCTCTAGTCAGAGTAGGGGAAGCATGTAGGAAGGATGCTGGGACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
||
| CDS-3UTR CCA 90 bp | CACAGAGCCCTGGTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCTGCCCATGCTTCATCAGCTCGTaGTACAAGTTCACAACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HRALVTGVGREDTCGCCPCFISS*YKFTTA Trigger: GGCTGTTGTGAACTTGTACCACGAGCTGATGAAGCA...TGGGCAGCATCCACAAGTGTCCTCTCTACCTACACCCGTGACCAGGGCTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCCAGGAGCTGGAATTACCGCATGCACTACCACCCATCCCTTTTGTTTGGCAGCCGCTTCCCCTTaGTGTAAGAGTGATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSPGAGITACTTTHPFCLAAASP*CKSDTR Trigger: TCTGGTATCACTCTTACACCAAGGGGAAGCGGCTGC...CAAACAAAAGGGATGGGTGGTAGTGCATGCGGTAATTCCAGCTCCTGGGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
||
| CDS-3UTR GCA 90 bp | CACAGAGCCCTGGTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCTGCCCATCGAACCATCCGAAGTaGTTCAGGGCTATTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HRALVTGVGREDTCGCCPSNHPK*FRAIGK Trigger: TTTTCCAATAGCCCTGAAGCACTTCGGATGGTTCGA...TGGGCAGCATCCACAAGTGTCCTCTCTACCTACACCCGTGACCAGGGCTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCTTTGTACCCTCCCCAGGAGCTGGAATTACCGCATGCACTACCACCCATCTGCTTCATCAGCTCGTaGTACAAGTTCACAACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PALYPPQELELPHALPPICFISS*YKFTTA Trigger: GGCTGTTGTGAACTTGTACCACGAGCTGATGAAGCA...GATGGGTGGTAGTGCATGCGGTAATTCCAGCTCCTGGGGAGGGTACAAAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
||
| CDS-3UTR CCA 90 bp | GTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCTGCCCAAGGTGCAGTCCTTGCTTCATCAGCTCGTaGTACAAGTTCACAACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTGVGREDTCGCCPRCSPCFISS*YKFTTA Trigger: GGCTGTTGTGAACTTGTACCACGAGCTGATGAAGCA...AGGACTGCACCTTGGGCAGCATCCACAAGTGTCCTCTCTACCTACACCCGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | CTTTGTACCCTCCCCAGGAGCTGGAATTACCGCATGCACTACCACCCATCCCTTGGAGCCCATTCCTCCTaGAGCAATTTTTATCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCTLPRSWNYRMHYHPSLGAHSS*SNFYPP Trigger: TGGGGGATAAAAATTGCTCCAGGAGGAATGGGCTCC...AAGGGATGGGTGGTAGTGCATGCGGTAATTCCAGCTCCTGGGGAGGGTACAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
||
| CDS-3UTR CCA 90 bp | GTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCTGCCCAAGGTGCAGTCCTGAGTTTATCATGGCATaGAAGGAGCCCATTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTGVGREDTCGCCPRCSPEFIMA*KEPIPP Trigger: AGGAGGAATGGGCTCCTTCCATGCCATGATAAACTC...AGGACTGCACCTTGGGCAGCATCCACAAGTGTCCTCTCTACCTACACCCGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCTTTGTACCCTCCCCAGGAGCTGGAATTACCGCATGCACTACCACCCATCTACATCCAGATGAGGTaGATGATGATGGGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PALYPPQELELPHALPPIYIQMR*MMMGYW Trigger: CCAGTACCCCATCATCATCCACCTCATCTGGATGTA...GATGGGTGGTAGTGCATGCGGTAATTCCAGCTCCTGGGGAGGGTACAAAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
||
| CDS-3UTR CCA 90 bp | CTTTGTACCCTCCCCAGGAGCTGGAATTACCGCATGCACTACCACCCATCCCTTGACCTTGGTGGTAGCTaGAGCTCCATTTTGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LCTLPRSWNYRMHYHPSLDLGGS*SSILLN Trigger: GTTCAGCAAAATGGAGCTCCAGCTACCACCAAGGTC...AAGGGATGGGTGGTAGTGCATGCGGTAATTCCAGCTCCTGGGGAGGGTACAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
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| 3UTR CAA 72 bp | TTGAGACAGGGTTCAGGCTCTTTTGAGCTTCCTGCTTaGTACCCTCCCCAGGAGCTGGAATTACCGCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRQGSGSFELPA*YPPQELELPHA Trigger: TGCATGCGGTAATTCCAGCTCCTGGGGAGGGTACAAAGCAGGAAGCTCAAAAGAGCCTGAACCCTGTCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
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| CDS-3UTR TCA 90 bp | TTTGTACCCTCCCCAGGAGCTGGAATTACCGCATGCACTACCACCCATCCCTTTTTGGCTGATGTGCAGTaGGACCAGGACAAACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FVPSPGAGITACTTTHPFLADVQ*DQDKLD Trigger: ATCCAGTTTGTCCTGGTCTCACTGCACATCAGCCAA...AAAGGGATGGGTGGTAGTGCATGCGGTAATTCCAGCTCCTGGGGAGGGTACAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
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| CDS-3UTR CCA 90 bp | AGTGTTCCTCTCCCAAGTTTAAGGCAGGGAGGGGGAAGTAAGTGTCCAGCCCTTATGAAGCCTCGAAGTTaGAAGGGCTTCCGATTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVPLPSLRQGGGSKCPALMKPRS*KGFRLA Trigger: GGCTAATCGGAAGCCCTTCCAACTTCGAGGCTTCAT...AAGGGCTGGACACTTACTTCCCCCTCCCTGCCTTAAACTTGGGAGAGGAACACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | AGTGTTCCTCTCCCAAGTTTAAGGCAGGGAGGGGGAAGTAAGTGTCCAGCCCTTGGAGCCCATTCCTCCTaGAGCAATTTTTATCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVPLPSLRQGGGSKCPALGAHSS*SNFYPP Trigger: TGGGGGATAAAAATTGCTCCAGGAGGAATGGGCTCC...AAGGGCTGGACACTTACTTCCCCCTCCCTGCCTTAAACTTGGGAGAGGAACACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | TTTGGCCCGAAGCTCATGCTTCCATGTGGAGTGAGAAGGGAGCCTGAGTCCACAGAGTTTATCATGGCATaGAAGGAGCCCATTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FGPKLMLPCGVRREPESTEFIMA*KEPIPP Trigger: AGGAGGAATGGGCTCCTTCCATGCCATGATAAACTC...TGTGGACTCAGGCTCCCTTCTCACTCCACATGGAAGCATGAGCTTCGGGCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 |
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| CDS-3UTR CCA 90 bp | CCTGACCACAGAGCCCTGGTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCACTGGATCAGCTGAATaGCAGTCATATGTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PDHRALVTGVGREDTCGCTGSAE*QSYVSS Trigger: GGAAGAAACATATGACTGCCATTCAGCTGATCCAGT...GCATCCACAAGTGTCCTCTCTACCTACACCCGTGACCAGGGCTCTGTGGTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | AGTGTTCCTCTCCCAAGTTTAAGGCAGGGAGGGGGAAGTAAGTGTCCAGCCCTTTATTGGAAAAGTCTATaGGGTCACAGCGCCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVPLPSLRQGGGSKCPALYWKSL*GHSARC Trigger: ACACCTGGCGCTGTGACCCCATAGACTTTTCCAATA...AAGGGCTGGACACTTACTTCCCCCTCCCTGCCTTAAACTTGGGAGAGGAACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | AGTGTTCCTCTCCCAAGTTTAAGGCAGGGAGGGGGAAGTAAGTGTCCAGCCCTTGAGTTTATCATGGCATaGAAGGAGCCCATTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVPLPSLRQGGGSKCPALEFIMA*KEPIPP Trigger: AGGAGGAATGGGCTCCTTCCATGCCATGATAAACTC...AAGGGCTGGACACTTACTTCCCCCTCCCTGCCTTAAACTTGGGAGAGGAACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | CCCGTCACTTTAATTAAGACACAAGTGAGCGCACAGCCTGACTTCCAGGCCTGCCAGAGGAGTTTATCATaGCATGGAAGGAGCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PVTLIKTQVSAQPDFQACQRSLS*HGRSPF Trigger: GAATGGGCTCCTTCCATGCCATGATAAACTCCTCTG...GCAGGCCTGGAAGTCAGGCTGTGCGCTCACTTGTGTCTTAATTAAAGTGACGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | GTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCTGCCCAAGGTGCAGTCCTACTGGATCAGCTGAATaGCAGTCATATGTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTGVGREDTCGCCPRCSPTGSAE*QSYVSS Trigger: GGAAGAAACATATGACTGCCATTCAGCTGATCCAGT...AGGACTGCACCTTGGGCAGCATCCACAAGTGTCCTCTCTACCTACACCCGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | CTGGTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCTGCCCAAGGTGCAGTACTGGATCAGCTGAATaGCAGTCATATGTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVTGVGREDTCGCCPRCSTGSAE*QSYVSS Trigger: GGAAGAAACATATGACTGCCATTCAGCTGATCCAGT...ACTGCACCTTGGGCAGCATCCACAAGTGTCCTCTCTACCTACACCCGTGACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CCA 90 bp | CCCGTCACTTTAATTAAGACACAAGTGAGCGCACAGCCTGACTTCCAGGCCTGCTACATCCAGATGAGGTaGATGATGATGGGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PVTLIKTQVSAQPDFQACYIQMR*MMMGYW Trigger: CCAGTACCCCATCATCATCCACCTCATCTGGATGTA...GCAGGCCTGGAAGTCAGGCTGTGCGCTCACTTGTGTCTTAATTAAAGTGACGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR GCA 90 bp | CCCGTCACTTTAATTAAGACACAAGTGAGCGCACAGCCTGACTTCCAGGCCTGCTCGAACCATCCGAAGTaGTTCAGGGCTATTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PVTLIKTQVSAQPDFQACSNHPK*FRAIGK Trigger: TTTTCCAATAGCCCTGAAGCACTTCGGATGGTTCGA...GCAGGCCTGGAAGTCAGGCTGTGCGCTCACTTGTGTCTTAATTAAAGTGACGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| 3UTR CAA 72 bp | AGCTGGAATTACCGCATGCACTACCACCCATCCCTTTaGTTTGTAAACAAGCCAGAGCTAAAGCTGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SWNYRMHYHPSL*FVNKPELKLCP Trigger: GGGACACAGCTTTAGCTCTGGCTTGTTTACAAACAAAAGGGATGGGTGGTAGTGCATGCGGTAATTCCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
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| CDS-3UTR CCA 90 bp | TTGTTTGTAAACAAGCCAGAGCTAAAGCTGTGTCCCGCACCTCATTTACACACACAGAGGAGTTTATCATaGCATGGAAGGAGCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LFVNKPELKLCPAPHLHTQRSLS*HGRSPF Trigger: GAATGGGCTCCTTCCATGCCATGATAAACTCCTCTG...TGTGTGTAAATGAGGTGCGGGACACAGCTTTAGCTCTGGCTTGTTTACAAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
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| CDS-3UTR CAA 90 bp | GTGGGGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCAGCTGGAGCTCCATTTaGCTGAACTGCACGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VGRGEPVRLLSPDHRALVSWSSI*LNCTGQ Trigger: CTGCCCCGTGCAGTTCAGCAAAATGGAGCTCCAGCT...GACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CAA 90 bp | CAGCTGTGGGGAGGGGAGAGCCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCAGCTGGAGCTCCATTTaGCTGAACTGCACGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLWGGESQSACSVLTTEPSWSSI*LNCTGQ Trigger: CTGCCCCGTGCAGTTCAGCAAAATGGAGCTCCAGCT...GGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGGCTCTCCCCTCCCCACAGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CAA 90 bp | AGCGCACAGCCTGACTTCCAGGCCTGCTGCCTGCCCATTCTGACCCGGGTGCGTAGCTGGAGCTCCATTTaGCTGAACTGCACGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SAQPDFQACCLPILTRVRSWSSI*LNCTGQ Trigger: CTGCCCCGTGCAGTTCAGCAAAATGGAGCTCCAGCT...ACGCACCCGGGTCAGAATGGGCAGGCAGCAGGCCTGGAAGTCAGGCTGTGCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167636.8 |
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| CDS-3UTR CAA 90 bp | GGGTGCGTGCCGGCCAGCCCTGAGTGTTCCTCTCCCAAGTTTAAGGCAGGGAGGATGGAGGAAGGTCACTaGCCCGTCCTTCTTCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GCVPASPECSSPKFKAGRMEEGH*PVLLPE Trigger: CTCCGGAAGAAGGACGGGCAAGTGACCTTCCTCCAT...CCTCCCTGCCTTAAACTTGGGAGAGGAACACTCAGGGCTGGCCGGCACGCACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CAA 90 bp | CCAGTCCGCCTGCTCAGTCCTGACCACAGAGCCCTGGTCACGGGTGTAGGTAGACATCAGAGGGTAGCTTaGGATCCGGGGATCCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: PVRLLSPDHRALVTGVGRHQRVA*DPGIRM Trigger: CATGCGGATCCCCGGATCCAAAGCTACCCTCTGATG...TCTACCTACACCCGTGACCAGGGCTCTGTGGTCAGGACTGAGCAGGCGGACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000167636.8 |
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| CDS-3UTR CAA 90 bp | AGACCCGGGTGCGTGCCGGCCAGCCCTGAGTGTTCCTCTCCCAAGTTTAAGGCAATGGAGGAAGGTCACTaGCCCGTCCTTCTTCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RPGCVPASPECSSPKFKAMEEGH*PVLLPE Trigger: CTCCGGAAGAAGGACGGGCAAGTGACCTTCCTCCAT...TGCCTTAAACTTGGGAGAGGAACACTCAGGGCTGGCCGGCACGCACCCGGGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 |
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| CDS-3UTR CAA 90 bp | GTGCCGGCCAGCCCTGAGTGTTCCTCTCCCAAGTTTAAGGCAGGGAGGGGGAAGAGCTGGAGCTCCATTTaGCTGAACTGCACGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VPASPECSSPKFKAGRGKSWSSI*LNCTGQ Trigger: CTGCCCCGTGCAGTTCAGCAAAATGGAGCTCCAGCT...CTTCCCCCTCCCTGCCTTAAACTTGGGAGAGGAACACTCAGGGCTGGCCGGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CAA 90 bp | AAGACACAAGTGAGCGCACAGCCTGACTTCCAGGCCTGCTGCCTGCCCATTCTGATGGAGGAAGGTCACTaGCCCGTCCTTCTTCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KTQVSAQPDFQACCLPILMEEGH*PVLLPE Trigger: CTCCGGAAGAAGGACGGGCAAGTGACCTTCCTCCAT...CAGAATGGGCAGGCAGCAGGCCTGGAAGTCAGGCTGTGCGCTCACTTGTGTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CAA 90 bp | GTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCTGCCCAAGGTGCAGTCCTATGGAGGAAGGTCACTaGCCCGTCCTTCTTCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VTGVGREDTCGCCPRCSPMEEGH*PVLLPE Trigger: CTCCGGAAGAAGGACGGGCAAGTGACCTTCCTCCAT...AGGACTGCACCTTGGGCAGCATCCACAAGTGTCCTCTCTACCTACACCCGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS CCA 90 bp | GCAATTTTTATCCCCCACCACCAACTCCAGGGAAGCACCGAGTGGTaGAAGACATGGAGGAAGGTCACTTGCCCGTCCTTCTTCCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AIFIPHHQLQGSTEW*KTWRKVTCPSFFRR Trigger: CCTCCGGAAGAAGGACGGGCAAGTGACCTTCCTCCATGTCTTCCACCACTCGGTGCTTCCCTGGAGTTGGTGGTGGGGGATAAAAATTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CAA 90 bp | CCCGTCACTTTAATTAAGACACAAGTGAGCGCACAGCCTGACTTCCAGGCCTGCCATCAGAGGGTAGCTTaGGATCCGGGGATCCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: PVTLIKTQVSAQPDFQACHQRVA*DPGIRM Trigger: CATGCGGATCCCCGGATCCAAAGCTACCCTCTGATG...GCAGGCCTGGAAGTCAGGCTGTGCGCTCACTTGTGTCTTAATTAAAGTGACGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006557.13 ENSMUST00000167636.8 |
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| CDS-3UTR CAA 90 bp | CCTGCTTTGTACCCTCCCCAGGAGCTGGAATTACCGCATGCACTACCACCCATCCATGAAGCCTCGAAGTaGGAAGGGCTTCCGATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PALYPPQELELPHALPPIHEASK*EGLPIS Trigger: GCTAATCGGAAGCCCTTCCAACTTCGAGGCTTCATG...GATGGGTGGTAGTGCATGCGGTAATTCCAGCTCCTGGGGAGGGTACAAAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
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| CDS-3UTR CAA 90 bp | CTGGTCACGGGTGTAGGTAGAGAGGACACTTGTGGATGCTGCCCAAGGTGCAGTCATGAAGCCTCGAAGTaGGAAGGGCTTCCGATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVTGVGREDTCGCCPRCSHEASK*EGLPIS Trigger: GCTAATCGGAAGCCCTTCCAACTTCGAGGCTTCATG...ACTGCACCTTGGGCAGCATCCACAAGTGTCCTCTCTACCTACACCCGTGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000167636.8 |
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| CDS TCA 90 bp | GCTGGGCCACAGGGCCAAGGGCAGACAATCCATAGTAGAGGTACATaGCGACATGTACAGAGGAGTTTATCATGGCATGGAAGGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGPQGQGQTIHSRGT*RHVQRSLSWHGRSP Trigger: TGGGCTCCTTCCATGCCATGATAAACTCCTCTGTACATGTCGTCATGTACCTCTACTATGGATTGTCTGCCCTTGGCCCTGTGGCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS-3UTR CAA 90 bp | TTGTTTGTAAACAAGCCAGAGCTAAAGCTGTGTCCCGCACCTCATTTACACACACATCAGAGGGTAGCTTaGGATCCGGGGATCCGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LFVNKPELKLCPAPHLHTHQRVA*DPGIRM Trigger: CATGCGGATCCCCGGATCCAAAGCTACCCTCTGATG...TGTGTGTAAATGAGGTGCGGGACACAGCTTTAGCTCTGGCTTGTTTACAAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006557.13 |
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| CDS TCA 90 bp | CTGGTAGTTGCAGCTGGGCATGAAGTAGTATTGGCTGATGTGCAGTaGGACCAGGACAAACTGGATCAGCTGAATGGCAGTCATATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LVVAAGHEVVLADVQ*DQDKLDQLNGSHMF Trigger: AAACATATGACTGCCATTCAGCTGATCCAGTTTGTCCTGGTCTCACTGCACATCAGCCAATACTACTTCATGCCCAGCTGCAACTACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS CCA 72 bp | ATCCCCCACCACCAACTCCAGGGAAGCACCGAGTGGTaGAAGACATGGAGGAAGGTCACTTGCCCGTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IPHHQLQGSTEW*KTWRKVTCPSF Trigger: GAAGGACGGGCAAGTGACCTTCCTCCATGTCTTCCACCACTCGGTGCTTCCCTGGAGTTGGTGGTGGGGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS CAA 72 bp | GTTGGCCTTGACCTTGGTGGTAGCTGGAGCTCCATTTaGCTGAACTGCACGGGGCAGCCGCTTCCCCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VGLDLGGSWSSI*LNCTGQPLPLG Trigger: ACCAAGGGGAAGCGGCTGCCCCGTGCAGTTCAGCAAAATGGAGCTCCAGCTACCACCAAGGTCAAGGCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS CCA 72 bp | AGGCCACTCGAACCATCCGAAGTGCTTCAGGGCTATTaGAAAAGTCTATGGGGTCACAGCGCCAGGTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: RPLEPSEVLQGY*KSLWGHSARCR Trigger: CCTACACCTGGCGCTGTGACCCCATAGACTTTTCCAATAGCCCTGAAGCACTTCGGATGGTTCGAGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS CAA 90 bp | ACTCCAGGGAAGCACCGAGTGGTGGAAGACATGGAGGAAGGTCACTaGCCCGTCCTTCTTCCGGAGGATAAATATCACTGTGTCCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: TPGKHRVVEDMEEGH*PVLLPEDKYHCVHQ Trigger: CTGATGGACACAGTGATATTTATCCTCCGGAAGAAGGACGGGCAAGTGACCTTCCTCCATGTCTTCCACCACTCGGTGCTTCCCTGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS TCA 72 bp | GCAGCTGGGCATGAAGTAGTATTGGCTGATGTGCAGTaGGACCAGGACAAACTGGATCAGCTGAATGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AAGHEVVLADVQ*DQDKLDQLNGS Trigger: ACTGCCATTCAGCTGATCCAGTTTGTCCTGGTCTCACTGCACATCAGCCAATACTACTTCATGCCCAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS GCA 72 bp | AAGCATGAAGAGCCAGGCCACTCGAACCATCCGAAGTaGTTCAGGGCTATTGGAAAAGTCTATGGGGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: KHEEPGHSNHPK*FRAIGKVYGVT Trigger: TGTGACCCCATAGACTTTTCCAATAGCCCTGAAGCACTTCGGATGGTTCGAGTGGCCTGGCTCTTCATGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS CAA 72 bp | AAGCACCGAGTGGTGGAAGACATGGAGGAAGGTCACTaGCCCGTCCTTCTTCCGGAGGATAAATATCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: KHRVVEDMEEGH*PVLLPEDKYHC Trigger: ACAGTGATATTTATCCTCCGGAAGAAGGACGGGCAAGTGACCTTCCTCCATGTCTTCCACCACTCGGTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS CAA 90 bp | TTCTTCCGGAGGATAAATATCACTGTGTCCATCAGCTCAATGACCTaGGAAAGCATGAAGAGCCAGGCCACTCGAACCATCCGAAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FFRRINITVSISSMT*ESMKSQATRTIRSA Trigger: AGCACTTCGGATGGTTCGAGTGGCCTGGCTCTTCATGCTTTCCAAGGTCATTGAGCTGATGGACACAGTGATATTTATCCTCCGGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS TCA 72 bp | CAGGGCCAAGGGCAGACAATCCATAGTAGAGGTACATaGCGACATGTACAGAGGAGTTTATCATGGCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: QGQGQTIHSRGT*RHVQRSLSWHG Trigger: TCCATGCCATGATAAACTCCTCTGTACATGTCGTCATGTACCTCTACTATGGATTGTCTGCCCTTGGCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
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| CDS CCA 72 bp | TACATGACGACATGTACAGAGGAGTTTATCATGGCATaGAAGGAGCCCATTCCTCCTGGAGCAATTTTTATC | + |
|
Preference number: 6 (lower is better) Translates to: YMTTCTEEFIMA*KEPIPPGAIFI Trigger: GATAAAAATTGCTCCAGGAGGAATGGGCTCCTTCCATGCCATGATAAACTCCTCTGTACATGTCGTCATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000102673.11 ENSMUST00000167636.8 |
||
| CDS TCA 72 bp | AAACTCATAGACAATGTAGAGGGAGAGTATCACCAGTaGGAAATTGTAGACAATCATGAAGCCTCGAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KLIDNVEGEYHQ*EIVDNHEASKL Trigger: CAACTTCGAGGCTTCATGATTGTCTACAATTTCTCACTGGTGATACTCTCCCTCTACATTGTCTATGAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006557.13 ENSMUST00000067896.4 ENSMUST00000167636.8 |
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