Pregenerated sensors for ELOB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000055839

Ensembl transcript IDs: ENSMUST00000069579.7, ENSMUST00000233593.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CCA 90 bp	AGTTCTGTGAACAAGAGGGAACAGAAAAGTCAATCAGGTAGACAGCCAAATTTTGAAGCTCTGGAGGGCTaGAAAAGGGCTCGATGCGGA	+
Preference number: 2 (lower is better) Translates to: SSVNKREQKSQSGRQPNFEALEG*KRARCG Trigger: TCCGCATCGAGCCCTTTTCCAGCCCTCCAGAGCTTC...AAAATTTGGCTGTCTACCTGATTGACTTTTCTGTTCCCTCTTGTTCACAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233593.2
3UTR TCA 72 bp	TTGGTCTGTAGTCTTTACTTGGGGTTAAGAGTTCTGTaGACAAGAGGGAACAGAAAAGTCAATCAGGTAGAC	+
Preference number: 3 (lower is better) Translates to: LVCSLYLGLRVL*TRGNRKVNQVD Trigger: GTCTACCTGATTGACTTTTCTGTTCCCTCTTGTTCACAGAACTCTTAACCCCAAGTAAAGACTACAGACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069579.7 ENSMUST00000233593.2
CDS-3UTR GCA 90 bp	GTTAAGAGTTCTGTGAACAAGAGGGAACAGAAAAGTCAATCAGGTAGACAGCCACAGGACAGCCAGGGCTaGTCGGAAGGCCAGGCCCAC	+
Preference number: 4 (lower is better) Translates to: VKSSVNKREQKSQSGRQPQDSQG*SEGQAH Trigger: GTGGGCCTGGCCTTCCGAGCAGCCCTGGCTGTCCTG...TGGCTGTCTACCTGATTGACTTTTCTGTTCCCTCTTGTTCACAGAACTCTTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233593.2
CDS-3UTR CCA 90 bp	GGGGTTAAGAGTTCTGTGAACAAGAGGGAACAGAAAAGTCAATCAGGTAGACAGGAAGCTCTGGAGGGCTaGAAAAGGGCTCGATGCGGA	+
Preference number: 4 (lower is better) Translates to: GVKSSVNKREQKSQSGRQEALEG*KRARCG Trigger: TCCGCATCGAGCCCTTTTCCAGCCCTCCAGAGCTTC...CTGTCTACCTGATTGACTTTTCTGTTCCCTCTTGTTCACAGAACTCTTAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069579.7
CDS-3UTR GCA 90 bp	GGGGTTAAGAGTTCTGTGAACAAGAGGGAACAGAAAAGTCAATCAGGTAGACAGTGGAAAAGGGCTCGATaGGGAGAGCTTCGAAGGTGT	+
Preference number: 4 (lower is better) Translates to: GVKSSVNKREQKSQSGRQWKRAR*GELRRC Trigger: ACACCTTCGAAGCTCTCCGCATCGAGCCCTTTTCCA...CTGTCTACCTGATTGACTTTTCTGTTCCCTCTTGTTCACAGAACTCTTAACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069579.7
CDS-3UTR CCA 90 bp	TTACTTGGGGTTAAGAGTTCTGTGAACAAGAGGGAACAGAAAAGTCAATCAGGTCACATCTGGAAGCTCTaGAGGGCTGGAAAAGGGCTC	+
Preference number: 4 (lower is better) Translates to: LLGVKSSVNKREQKSQSGHIWKL*RAGKGL Trigger: GAGCCCTTTTCCAGCCCTCCAGAGCTTCCAGATGTG...ACCTGATTGACTTTTCTGTTCCCTCTTGTTCACAGAACTCTTAACCCCAAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069579.7
CDS-3UTR CAA 90 bp	GTTAAGAGTTCTGTGAACAAGAGGGAACAGAAAAGTCAATCAGGTAGACAGCCATCCTCTGGCGGCCGCTaGAGGATGCCCTCGACGATG	+
Preference number: 5 (lower is better) Translates to: VKSSVNKREQKSQSGRQPSSGGR*RMPSTM Trigger: CATCGTCGAGGGCATCCTCAAGCGGCCGCCAGAGGA...TGGCTGTCTACCTGATTGACTTTTCTGTTCCCTCTTGTTCACAGAACTCTTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069579.7 ENSMUST00000233593.2
CDS-3UTR CAA 90 bp	TTACTTGGGGTTAAGAGTTCTGTGAACAAGAGGGAACAGAAAAGTCAATCAGGTTCCTCTGGCGGCCGCTaGAGGATGCCCTCGACGATG	+
Preference number: 5 (lower is better) Translates to: LLGVKSSVNKREQKSQSGSSGGR*RMPSTM Trigger: CATCGTCGAGGGCATCCTCAAGCGGCCGCCAGAGGA...ACCTGATTGACTTTTCTGTTCCCTCTTGTTCACAGAACTCTTAACCCCAAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069579.7 ENSMUST00000233593.2

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