Pregenerated sensors for ELN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029675Ensembl transcript IDs: ENSMUST00000015138.13, ENSMUST00000201856.2
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACACCTCCAAGGCCAGCAGCACCATATTTGGCTGCCTTAGCAGCTaGAGCAGGGGACACACCTCCACCAGCTCCCAGTCCACCGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: DTSKASSTIFGCLSS*SRGHTSTSSQSTGS Trigger: GGAGCCGGTGGACTGGGAGCTGGTGGAGGTGTGTCCCCTGCTGCAGCTGCTAAGGCAGCCAAATATGGTGCTGCTGGCCTTGGAGGTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR GCA 90 bp | GAGACCTCCAGGGCCACCGAGACCTCCAGGGCCACCAAGGCCACCTaGTGCTCCATATTTAGCAGCTTTGGATGCAGCCAGCGATCCAGG | + |
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Preference number: 1 (lower is better) Translates to: ETSRATETSRATKAT*CSIFSSFGCSQRSR Trigger: CCTGGATCGCTGGCTGCATCCAAAGCTGCTAAATATGGAGCAGCAGGTGGCCTTGGTGGCCCTGGAGGTCTCGGTGGCCCTGGAGGTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR GCA 90 bp | ACCTCCAGGGCCACCGAGACCTCCAGGGCCACCAAGGCCACCTGCTaGTCCATATTTAGCAGCTTTGGATGCAGCCAGCGATCCAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: TSRATETSRATKATC*SIFSSFGCSQRSRY Trigger: GTACCTGGATCGCTGGCTGCATCCAAAGCTGCTAAATATGGAGCAGCAGGTGGCCTTGGTGGCCCTGGAGGTCTCGGTGGCCCTGGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR GCA 90 bp | AGGGCCACCAAGGCCACCTGCTGCTCCATATTTAGCAGCTTTGGATaGAGCCAGCGATCCAGGTACTGCTCCAGCTCCAAATCCAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: RATKATCCSIFSSFG*SQRSRYCSSSKSRD Trigger: GTCCCTGGATTTGGAGCTGGAGCAGTACCTGGATCGCTGGCTGCATCCAAAGCTGCTAAATATGGAGCAGCAGGTGGCCTTGGTGGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR CCA 90 bp | GAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTaGGTACCAATGGGATGCAGCCAGGAATGGCTCCTGGTGGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: ERDHVTKSIVKASGI*VPMGCSQEWLLVGR Trigger: CCTGCCCACCAGGAGCCATTCCTGGCTGCATCCCATTGGTACCCAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR CCA 90 bp | TCTGTAAGAGTGGCTCCAGGAAGAACGGGGTTACAGTACTGCATGTaGGGACAACCAGCCCACACAACCCTTTGCACCCTAGGCCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: SVRVAPGRTGLQYCM*GQPAHTTLCTLGQD Trigger: ATCCTGGCCTAGGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAACCCCGTTCTTCCTGGAGCCACTCTTACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR GCA 90 bp | ATTGATCTATCACAGCGAAACACAAAGAGGTGGGGTGGTGAGACATaGTCTGTAAGAGTGGCTCCAGGAAGAACGGGGTTACAGTACTGC | + |
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Preference number: 1 (lower is better) Translates to: IDLSQRNTKRWGGET*SVRVAPGRTGLQYC Trigger: GCAGTACTGTAACCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACCCCACCTCTTTGTGTTTCGCTGTGATAGATCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCAGCAGCGGCAGCAGCAGGGGGTGCAGCTCCTGCTACTCTACCGGGAACAGGGGGAGCTCCTGGGTaGGAAGAGATGGGACACCCG | + |
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Preference number: 2 (lower is better) Translates to: AAAAAAAGGAAPATLPGTGGAPG*EEMGHP Trigger: CGGGTGTCCCATCTCTTCCCACCCAGGAGCTCCCCC...TGTTCCCGGTAGAGTAGCAGGAGCTGCACCCCCTGCTGCTGCCGCTGCTGCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR CAA 90 bp | TCACTTTCTCTTCCGGCCACAGGATTTCCCAAAGCAGCCCCCACCTaGGTATCCCAGGGCTCCAAGGGCTCCTCCATAGGGCTTCGGGGG | + |
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Preference number: 2 (lower is better) Translates to: SLSLPATGFPKAAPT*VSQGSKGSSIGLRG Trigger: CCCCCGAAGCCCTATGGAGGAGCCCTTGGAGCCCTGGGATACCAAGGTGGGGGCTGCTTTGGGAAATCCTGTGGCCGGAAGAGAAAGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR CAA 90 bp | AATGGCCTGGCTCCTAGGACACCTCCAAGGCCAGCAGCACCATATTaGGCTGCCTTAGCAGCTGCAGCAGGGGACACACCTCCACCAGCT | + |
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Preference number: 2 (lower is better) Translates to: NGLAPRTPPRPAAPY*AALAAAAGDTPPPA Trigger: AGCTGGTGGAGGTGTGTCCCCTGCTGCAGCTGCTAAGGCAGCCAAATATGGTGCTGCTGGCCTTGGAGGTGTCCTAGGAGCCAGGCCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR-3UTR GCA 90 bp | TCCGGTATTTGGGTACCAATGGGATGCAGCCAGGAATGGCTCCTGGTGGGCAGGAGGGGGAGGTGGGACTaGCCAACAAAGGTGTGCACC | + |
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Preference number: 2 (lower is better) Translates to: SGIWVPMGCSQEWLLVGRRGRWD*PTKVCT Trigger: GGTGCACACCTTTGTTGGGCAGTCCCACCTCCCCCT...CCTGCCCACCAGGAGCCATTCCTGGCTGCATCCCATTGGTACCCAAATACCGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAGCAGCGGCAGCAGCAGGGGGTGCAGCTCCTGCTACTCTACCGGGAACATTTAGCAGCTTTGGATaGAGCCAGCGATCCAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: AAAAAAAGGAAPATLPGTFSSFG*SQRSRY Trigger: GTACCTGGATCGCTGGCTGCATCCAAAGCTGCTAAA...TGTTCCCGGTAGAGTAGCAGGAGCTGCACCCCCTGCTGCTGCCGCTGCTGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGCAGCTGCAGCAGGGGACACACCTCCACCAGCTCCCAGTCCACCGGCTCCCAAGGCTTCCGGTATTTaGGTACCAATGGGATGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LAAAAGDTPPPAPSPPAPKASGI*VPMGCS Trigger: GCTGCATCCCATTGGTACCCAAATACCGGAAGCCTT...GGGAGCCGGTGGACTGGGAGCTGGTGGAGGTGTGTCCCCTGCTGCAGCTGCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGTTACAGTACGATCGGGGTGTGTGGTaGGGACGGGGACAGGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GGETCSVRVAPGRTGLQYDRGVW*GRGQAA Trigger: GGCAGCCTGTCCCCGTCCCCACCACACACCCCGATC...GTACTGTAACCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGCCAGGTCTTGCTGCAACTCCTCCACCTGGGAATGGCCTGGCTCCTAGGGCGGCAGCTCTGTACTaGGCTTTGGCAGCTGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: PKPGLAATPPPGNGLAPRAAALY*ALAAAL Trigger: TAAGGCAGCTGCCAAAGCCCAGTACAGAGCTGCCGC...CCTAGGAGCCAGGCCATTCCCAGGTGGAGGAGTTGCAGCAAGACCTGGCTTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGTGGGGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGGGTTTCCAAGGCCACTaGCCTGTTGTCCCCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: KRWGGETCSVRVAPGRTGGFQGH*PVVPSQ Trigger: CTGGGAGGGGACAACAGGCCAGTGGCCTTGGAAACC...CCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACCCCACCTCTT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | AACTCCCAGGCCCCCAGCACCACCACCTGGATAAATGGGAGAAAGTCCAAAGCCGGTTTCCAAGGCCACTaGCCTGTTGTCCCCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: NSQAPSTTTWINGRKSKAGFQGH*PVVPSQ Trigger: CTGGGAGGGGACAACAGGCCAGTGGCCTTGGAAACC...GGCTTTGGACTTTCTCCCATTTATCCAGGTGGTGGTGCTGGGGGCCTGGGAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR CAA 90 bp | CCTCCAGGGCCACCAAGGCCACCTGCTGCTCCATATTTAGCAGCTTaGGATGCAGCCAGCGATCCAGGTACTGCTCCAGCTCCAAATCCA | + |
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Preference number: 2 (lower is better) Translates to: PPGPPRPPAAPYLAA*DAASDPGTAPAPNP Trigger: TGGATTTGGAGCTGGAGCAGTACCTGGATCGCTGGCTGCATCCAAAGCTGCTAAATATGGAGCAGCAGGTGGCCTTGGTGGCCCTGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAACCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGGGGGAGCTCCTGGGTaGGAAGAGATGGGACACCCG | + |
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Preference number: 2 (lower is better) Translates to: RGTKERGIMSPNPSSRLPGGAPG*EEMGHP Trigger: CGGGTGTCCCATCTCTTCCCACCCAGGAGCTCCCCC...CGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGGTTCCCCT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGATGGGTGGATGGCAGGTGGATTCCATAAGAACAAGGGAGCTATTCCCAGGATGCAGCCAGGAATaGCTCCTGGTGGGCAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: RWMGGWQVDSIRTRELFPGCSQE*LLVGRG Trigger: CCCCCTGCCCACCAGGAGCCATTCCTGGCTGCATCC...TGGGAATAGCTCCCTTGTTCTTATGGAATCCACCTGCCATCCACCCATCCACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR CAA 90 bp | CAGCACCACCACCTGGATAAATGGGAGAAAGTCCAAAGCCAGGTCTaGCTGCAACTCCTCCACCTGGGAATGGCCTGGCTCCTAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: QHHHLDKWEKVQSQV*LQLLHLGMAWLLGH Trigger: GTGTCCTAGGAGCCAGGCCATTCCCAGGTGGAGGAGTTGCAGCAAGACCTGGCTTTGGACTTTCTCCCATTTATCCAGGTGGTGGTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGGAACCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCTGGGTGGGAAGAGATaGGACACCCGCCCTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: TGEPKREGSCHQIHRQGFLGGKR*DTRPGL Trigger: GAGGCCAGGGCGGGTGTCCCATCTCTTCCCACCCAG...GAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGGTTCCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | CGGGGTTACAGTACTGCATGTGGGGACAACCAGCCCACACAACCCTTTGCACCCAGCACCAATTTCCCTTaGAGATGGAGACTGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: RGYSTACGDNQPTQPFAPSTNFP*RWRLWG Trigger: CCCCCACAGTCTCCATCTCCAAGGGAAATTGGTGCT...GGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAACCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAGGTGGGGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGATGGCTGCTGCTGTCTaGTTTCCTTGTCCTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: KRWGGETCSVRVAPGRTGMAAAV*FPCPVG Trigger: ACCCACAGGACAAGGAAATCAGACAGCAGCAGCCAT...CCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACCCCACCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR GCA 90 bp | TTACAGTACTGCATGTGGGGACAACCAGCCCACACAACCCTTTGCACCCTAGGCTGGGTACCAATGGGATaGAGCCAGGAATGGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LQYCMWGQPAHTTLCTLGWVPMG*SQEWLL Trigger: CAGGAGCCATTCCTGGCTGCATCCCATTGGTACCCA...GCCTAGGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGCTGGGTGGGAAGAGATaGGACACCCGCCCTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: PKREGSCHQIHRQGFRYLLGGKR*DTRPGL Trigger: GAGGCCAGGGCGGGTGTCCCATCTCTTCCCACCCAG...CAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGGGTAGGATGCAGCCAGGAATaGCTCCTGGTGGGCAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: RERDHVTKSIVKASGIWVGCSQE*LLVGRG Trigger: CCCCCTGCCCACCAGGAGCCATTCCTGGCTGCATCC...TACCCAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGCCAGGTCTTGCTGCAACTCCTCCACCTGGGAATGGCCTGGCTCCTAGGAGGGTGTCCCAGATGTaGGAAGTAGCTTTAGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: PKPGLAATPPPGNGLAPRRVSQM*EVALGN Trigger: GTTACCTAAAGCTACTTCCCACATCTGGGACACCCT...CCTAGGAGCCAGGCCATTCCCAGGTGGAGGAGTTGCAGCAAGACCTGGCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR CAA 90 bp | AGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTaGGGTACCAATGGGATGCAGCCAGGAATGGCTCCTGGTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: REGSCHQIHRQGFRY*GTNGMQPGMAPGGQ Trigger: CTGCCCACCAGGAGCCATTCCTGGCTGCATCCCATTGGTACCCAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGTTACAGTACTGGGTACCAATGGGATaGAGCCAGGAATGGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GGETCSVRVAPGRTGLQYWVPMG*SQEWLL Trigger: CAGGAGCCATTCCTGGCTGCATCCCATTGGTACCCA...GTACTGTAACCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGGGCAGCAGCAGGGGGTaGAGCTCCTGCTACTCTACC | + |
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Preference number: 2 (lower is better) Translates to: PKREGSCHQIHRQGFRYLGSSRG*SSCYST Trigger: GGTAGAGTAGCAGGAGCTGCACCCCCTGCTGCTGCC...CAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCAGGAAGAACGGGGTTACAGTACTGCATGTGGGGACAACCAGCCCACACAGGGTGTCCCAGATGTaGGAAGTAGCTTTAGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: GSRKNGVTVLHVGTTSPHRVSQM*EVALGN Trigger: GTTACCTAAAGCTACTTCCCACATCTGGGACACCCT...GTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAACCCCGTTCTTCCTGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCAGGAAGAACGGGGTTACAGTACTGCATGTGGGGACAACCAGCCCACACACTAGGCAGTCAAGATaGACGGATGGATGGATGGAT | + |
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Preference number: 2 (lower is better) Translates to: GSRKNGVTVLHVGTTSPHTRQSR*TDGWMD Trigger: ATCCATCCATCCATCCGTCCATCTTGACTGCCTAGT...GTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAACCCCGTTCTTCCTGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGATGGGTGGATGGCAGGTGGATTCCATAAGAACAAGGGAGCTATTCCCACCACCAAGGCCATACTaGGCAGCCTTAGCAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: RWMGGWQVDSIRTRELFPPPRPY*AALAAA Trigger: AGCTGCTGCTAAGGCTGCCCAGTATGGCCTTGGTGG...TGGGAATAGCTCCCTTGTTCTTATGGAATCCACCTGCCATCCACCCATCCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR-3UTR TCA 90 bp | GATCACTTTCTCTTCCGGCCACAGGATTTCCCAAAGCAGCCCCCACCTTGGTATATGGCTGCTGCTGTCTaGTTTCCTTGTCCTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: DHFLFRPQDFPKQPPPWYMAAAV*FPCPVG Trigger: ACCCACAGGACAAGGAAATCAGACAGCAGCAGCCAT...ATACCAAGGTGGGGGCTGCTTTGGGAAATCCTGTGGCCGGAAGAGAAAGTGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGATAGTGGGTATGCCCAGCCAGCTTAGTGGTACTAGGCAGTCAAGATGGTCCAAAGCCAGGTCTTaGTGCAACTCCTCCACCTGG | + |
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Preference number: 2 (lower is better) Translates to: RLIVGMPSQLSGTRQSRWSKARS*CNSSTW Trigger: CCAGGTGGAGGAGTTGCAGCAAGACCTGGCTTTGGA...CCATCTTGACTGCCTAGTACCACTAAGCTGGCTGGGCATACCCACTATCAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | TTACAGTACTGCATGTGGGGACAACCAGCCCACACAACCCTTTGCACCCTAGGCAAGGCTTCCGGTATTTaGGTACCAATGGGATGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LQYCMWGQPAHTTLCTLGKASGI*VPMGCS Trigger: GCTGCATCCCATTGGTACCCAAATACCGGAAGCCTT...GCCTAGGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGATGGGTGGATGGCAGGTGGATTCCATAAGAACAAGGGAGCTATTCCCAGATTTCCTTGTCCTGTaGGTTTCCAAGGCCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: RWMGGWQVDSIRTRELFPDFLVL*VSKATG Trigger: GCCAGTGGCCTTGGAAACCCACAGGACAAGGAAATC...TGGGAATAGCTCCCTTGTTCTTATGGAATCCACCTGCCATCCACCCATCCACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | TCACCAAATCCATCGTCAAGGCTTCCGGTATTTGGGTACCAATGGGATGCAGCCCTGGTTAGGGCTGCATaGCTGCTGCTGTCTGATTTC | + |
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Preference number: 2 (lower is better) Translates to: SPNPSSRLPVFGYQWDAALVRAA*LLLSDF Trigger: GAAATCAGACAGCAGCAGCCATGCAGCCCTAACCAG...GGCTGCATCCCATTGGTACCCAAATACCGGAAGCCTTGACGATGGATTTGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGTTACAGTACAGGTGGATGGGTGGATaGCAGGTGGATTCCATAAGA | + |
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Preference number: 2 (lower is better) Translates to: GGETCSVRVAPGRTGLQYRWMGG*QVDSIR Trigger: TCTTATGGAATCCACCTGCCATCCACCCATCCACCT...GTACTGTAACCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGGATTTCCTTGTCCTGTaGGTTTCCAAGGCCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: PKREGSCHQIHRQGFRYLDFLVL*VSKATG Trigger: GCCAGTGGCCTTGGAAACCCACAGGACAAGGAAATC...CAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCCCCAATTAGCCACAAAAATAAACCCAAAGAGCACACCAACAATCAAACATACGGGGTTACAGTACTaGATGTGGGGACAACCAGCC | + |
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Preference number: 2 (lower is better) Translates to: SPQLATKINPKSTPTIKHTGLQY*MWGQPA Trigger: GGCTGGTTGTCCCCACATGCAGTACTGTAACCCCGT...ATGTTTGATTGTTGGTGTGCTCTTTGGGTTTATTTTTGTGGCTAATTGGGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| 3UTR-3UTR CAA 90 bp | ATGCAGCCAGCGATCCAGGTACTGCTCCAGCTCCAAATCCAGGGACACCAGCACAAGGCCACTGGCCTGTaGTCCCCTCCCAGGTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: MQPAIQVLLQLQIQGHQHKATGL*SPPRWG Trigger: CCCCCACCTGGGAGGGGACAACAGGCCAGTGGCCTT...GTGCTGGTGTCCCTGGATTTGGAGCTGGAGCAGTACCTGGATCGCTGGCTGCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCCGGTATTTGGGTACCAATGGGATGCAGCCAGGAATGGCTCCTGGTGGGCAAAGGCCACTGGCCTGTaGTCCCCTCCCAGGTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: LPVFGYQWDAARNGSWWAKATGL*SPPRWG Trigger: CCCCCACCTGGGAGGGGACAACAGGCCAGTGGCCTT...TGCCCACCAGGAGCCATTCCTGGCTGCATCCCATTGGTACCCAAATACCGGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| 3UTR GCA 72 bp | GCCACCGAGACCTCCAGGGCCACCAAGGCCACCTGCTaGTCCATATTTAGCAGCTTTGGATGCAGCCAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: ATETSRATKATC*SIFSSFGCSQR Trigger: TCGCTGGCTGCATCCAAAGCTGCTAAATATGGAGCAGCAGGTGGCCTTGGTGGCCCTGGAGGTCTCGGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
||
| 3UTR GCA 72 bp | AGGGCCACCGAGACCTCCAGGGCCACCAAGGCCACCTaGTGCTCCATATTTAGCAGCTTTGGATGCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RATETSRATKAT*CSIFSSFGCSQ Trigger: CTGGCTGCATCCAAAGCTGCTAAATATGGAGCAGCAGGTGGCCTTGGTGGCCCTGGAGGTCTCGGTGGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
||
| 3UTR GCA 72 bp | AAGGCCAGCAGCACCATATTTGGCTGCCTTAGCAGCTaGAGCAGGGGACACACCTCCACCAGCTCCCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KASSTIFGCLSS*SRGHTSTSSQS Trigger: GGACTGGGAGCTGGTGGAGGTGTGTCCCCTGCTGCAGCTGCTAAGGCAGCCAAATATGGTGCTGCTGGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
||
| 3UTR CCA 72 bp | CAGGTCTTGCTGCAACTCCTCCACCTGGGAATGGCCTaGCTCCTAGGACACCTCCAAGGCCAGCAGCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: QVLLQLLHLGMA*LLGHLQGQQHH Trigger: ATGGTGCTGCTGGCCTTGGAGGTGTCCTAGGAGCCAGGCCATTCCCAGGTGGAGGAGTTGCAGCAAGACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGGTGGGGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGGCTCTGTACTGGGCTTaGGCAGCTGCCTTAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KRWGGETCSVRVAPGRTGALYWA*AAALAA Trigger: TGCTGCTAAGGCAGCTGCCAAAGCCCAGTACAGAGC...CCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACCCCACCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACAGTACTGCATGTGGGGACAACCAGCCCACACAACCCTTTGCACCCTAGGCGCAGTAGCACCAACGTaGATGAGGTCGCGAGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQYCMWGQPAHTTLCTLGAVAPT*MRSRVR Trigger: CCTGACTCGCGACCTCATCAACGTTGGTGCTACTGC...GCCTAGGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| 3UTR CCA 72 bp | AATCCATCGTCAAGGCTTCCGGTATTTGGGTACCAATaGGATGCAGCCAGGAATGGCTCCTGGTGGGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: NPSSRLPVFGYQ*DAARNGSWWAG Trigger: CCCTGCCCACCAGGAGCCATTCCTGGCTGCATCCCATTGGTACCCAAATACCGGAAGCCTTGACGATGGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| 3UTR CCA 72 bp | GTGGCTCCAGGAAGAACGGGGTTACAGTACTGCATGTaGGGACAACCAGCCCACACAACCCTTTGCACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: VAPGRTGLQYCM*GQPAHTTLCTL Trigger: TAGGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAACCCCGTTCTTCCTGGAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGGATGGGTGGATGGCAGGTGGATTCCATAAGAACAAGGGAGCTATTCCCAAAAGCAGCCCCCACCTaGGTATCCCAGGGCTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RWMGGWQVDSIRTRELFPKAAPT*VSQGSK Trigger: CTTGGAGCCCTGGGATACCAAGGTGGGGGCTGCTTT...TGGGAATAGCTCCCTTGTTCTTATGGAATCCACCTGCCATCCACCCATCCACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
||
| 3UTR CCA 72 bp | TTTTCCACCAACTCCCAGGCCCCCAGCACCACCACCTaGATAAATGGGAGAAAGTCCAAAGCCAGGTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: FSTNSQAPSTTT*INGRKSKARSC Trigger: GCAAGACCTGGCTTTGGACTTTCTCCCATTTATCCAGGTGGTGGTGCTGGGGGCCTGGGAGTTGGTGGAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGGACAGGGGAACCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGCAGTAGCACCAACGTaGATGAGGTCGCGAGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: AGTGEPKREGSCHQIHRQAVAPT*MRSRVR Trigger: CCTGACTCGCGACCTCATCAACGTTGGTGCTACTGC...TTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGGTTCCCCTGTCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGGTGGGGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGTGCTGTCTGATTTCCTaGTCCTGTGGGTTTCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KRWGGETCSVRVAPGRTGCCLIS*SCGFPR Trigger: CCTTGGAAACCCACAGGACAAGGAAATCAGACAGCA...CCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACCCCACCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| 3UTR GCA 72 bp | TCACAGCGAAACACAAAGAGGTGGGGTGGTGAGACATaGTCTGTAAGAGTGGCTCCAGGAAGAACGGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SQRNTKRWGGET*SVRVAPGRTGL Trigger: TAACCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACCCCACCTCTTTGTGTTTCGCTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| 3UTR CCA 72 bp | CATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTaGGTACCAATGGGATGCAGCCAGGAATGGCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: HVTKSIVKASGI*VPMGCSQEWLL Trigger: CAGGAGCCATTCCTGGCTGCATCCCATTGGTACCCAAATACCGGAAGCCTTGACGATGGATTTGGTGACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCAGTCCACCGGCCCCCAGTCCACCGGCTCCCAATCCTCCGGCTCCACCAACTGCCCCTGGGAAGGTaGCTGCAGGAAAGGCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPVHRPPVHRLPILRLHQLPLGR*LQERPR Trigger: TCGGGGCCTTTCCTGCAGGCACCTTCCCAGGGGCAG...TTGGTGGAGCCGGAGGATTGGGAGCCGGTGGACTGGGGGCCGGTGGACTGGGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
||
| CDS-3UTR GCA 90 bp | CCAAAGCCAGGTCTTGCTGCAACTCCTCCACCTGGGAATGGCCTGGCTCCTAGGCGCAGCAGCCCCTGCTaGTCCCCCGGGCACCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKPGLAATPPPGNGLAPRRSSPC*SPGHQS Trigger: GCTCTGGTGCCCGGGGGAGCAGCAGGGGCTGCTGCG...CCTAGGAGCCAGGCCATTCCCAGGTGGAGGAGTTGCAGCAAGACCTGGCTTTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
||
| CDS-3UTR GCA 90 bp | CAAATCCAGGGACACCAGCTCCAAGCCCAGCGGCAGCTCTGTACTGGGCTTTGGAGCCGCAGCAGCCCCTaGTGCTCCCCCGGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QIQGHQLQAQRQLCTGLWSRSSP*CSPGHQ Trigger: CTGGTGCCCGGGGGAGCAGCAGGGGCTGCTGCGGCT...CCAAAGCCCAGTACAGAGCTGCCGCTGGGCTTGGAGCTGGTGTCCCTGGATTTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGGTGGGGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGCGCAGCAGCCCCTGCTaGTCCCCCGGGCACCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRWGGETCSVRVAPGRTGRSSPC*SPGHQS Trigger: GCTCTGGTGCCCGGGGGAGCAGCAGGGGCTGCTGCG...CCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACCCCACCTCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCGGTATTTGGGTACCAATGGGATGCAGCCAGGAATGGCTCCTGGTGGGCAAGCCGCAGCAGCCCCTaGTGCTCCCCCGGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPVFGYQWDAARNGSWWASRSSP*CSPGHQ Trigger: CTGGTGCCCGGGGGAGCAGCAGGGGCTGCTGCGGCT...TGCCCACCAGGAGCCATTCCTGGCTGCATCCCATTGGTACCCAAATACCGGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCCAGGAAGAACGGGGTTACAGTACTGCATGTGGGGACAACCAGCCCACACGGGACACCAGGCTGCTaGCCCCCAAAGGGTCCGACC | + |
|
Preference number: 4 (lower is better) Translates to: GSRKNGVTVLHVGTTSPHGTPGC*PPKGPT Trigger: GGTCGGACCCTTTGGGGGTCAGCAGCCTGGTGTCCC...GTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAACCCCGTTCTTCCTGGAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS-3UTR GCA 90 bp | AAGAGGTGGGGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGGGCGGCGGCAGCAGCTaGAGCTGCAGGGGTACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRWGGETCSVRVAPGRTGGGGSS*SCRGTC Trigger: GCAGGTACCCCTGCAGCTGCAGCTGCTGCCGCCGCC...CCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACCCCACCTCTT 63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTGCAGCAGGGGACACACCTCCACCAGCTCCCAGTCCACCGGCTCCCAGTCCAATACCAGCCCCTaGATAATAGACTCCACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSCSRGHTSTSSQSTGSQSNTSP*IIDSTG Trigger: CCCGGTGGAGTCTATTATCCAGGGGCTGGTATTGGA...CTGGGAGCCGGTGGACTGGGAGCTGGTGGAGGTGTGTCCCCTGCTGCAGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAGTCCACCGGCTCCCAATCCTCCGGCTCCACCAAGGCCATACTGGGCAGCGCCTGGGTATACACCTaGAAGACCAACACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PQSTGSQSSGSTKAILGSAWVYT*KTNTRN Trigger: GTTCCTGGTGTTGGTCTTCCAGGTGTATACCCAGGC...GCTGCCCAGTATGGCCTTGGTGGAGCCGGAGGATTGGGAGCCGGTGGACTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
||
| CDS-3UTR GCA 90 bp | CGGGGTTACAGTACTGCATGTGGGGACAACCAGCCCACACAACCCTTTGCACCCGGCAGCAGCAGGGGGTaGAGCTCCTGCTACTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: RGYSTACGDNQPTQPFAPGSSRG*SSCYST Trigger: GGTAGAGTAGCAGGAGCTGCACCCCCTGCTGCTGCC...GGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAACCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS-3UTR CCA 90 bp | TCCGGTATTTGGGTACCAATGGGATGCAGCCAGGAATGGCTCCTGGTGGGCAGGCCGAGCTCCTGTTCCTaGGAGCACTCCGCCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGIWVPMGCSQEWLLVGRPSSCS*EHSAWV Trigger: TACCCAGGCGGAGTGCTCCCAGGAACAGGAGCTCGG...CCTGCCCACCAGGAGCCATTCCTGGCTGCATCCCATTGGTACCCAAATACCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGGTGGGGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGGACCCCTGTCCCTGTTaGGTAGCCAGCCTTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KRWGGETCSVRVAPGRTGDPCPC*VASLAP Trigger: GGGGGCAAGGCTGGCTACCCAACAGGGACAGGGGTC...CCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACCCCACCTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS-3UTR CCA 90 bp | TCCGGTATTTGGGTACCAATGGGATGCAGCCAGGAATGGCTCCTGGTGGGCAGGGGCAGCAGCAGCAGCTaGGCTTGCACCTCCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGIWVPMGCSQEWLLVGRGSSSS*ACTSKS Trigger: GGACTTGGAGGTGCAAGCCCAGCTGCTGCTGCTGCC...CCTGCCCACCAGGAGCCATTCCTGGCTGCATCCCATTGGTACCCAAATACCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS-3UTR GCA 90 bp | TTACAGTACTGCATGTGGGGACAACCAGCCCACACAACCCTTTGCACCCTAGGCCCCTGGGAAGGTGCCTaGAGGAAAGGCCCCGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LQYCMWGQPAHTTLCTLGPWEGA*RKGPET Trigger: GGTCTCGGGGCCTTTCCTGCAGGCACCTTCCCAGGG...GCCTAGGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| CDS-3UTR GCA 90 bp | TTACAGTACTGCATGTGGGGACAACCAGCCCACACAACCCTTTGCACCCTAGGCCTGCCCCTGGGAAGGTaGCTGCAGGAAAGGCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LQYCMWGQPAHTTLCTLGLPLGR*LQERPR Trigger: TCGGGGCCTTTCCTGCAGGCACCTTCCCAGGGGCAG...GCCTAGGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| CDS-3UTR CCA 90 bp | CGGGGTTACAGTACTGCATGTGGGGACAACCAGCCCACACAACCCTTTGCACCCCAGAGCTCCTGCCCCTaGGAAGGTGCCTGCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGYSTACGDNQPTQPFAPQSSCP*EGACRK Trigger: TTTCCTGCAGGCACCTTCCCAGGGGCAGGAGCTCTG...GGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAACCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| CDS-3UTR CCA 90 bp | CGGGGTTACAGTACTGCATGTGGGGACAACCAGCCCACACAACCCTTTGCACCCACCTGGCAGTGCACCTaGTACTGCACCTGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGYSTACGDNQPTQPFAPTWQCT*YCTWHQ Trigger: CTGGTGCCAGGTGCAGTACCAGGTGCACTGCCAGGT...GGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAACCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS-3UTR GCA 90 bp | GCAGGGACAGGGGAACCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAAAAGGCCCCGAGACCTaGACCCGGGCCAGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGTGEPKREGSCHQIHRQKGPET*TRASTS Trigger: GGAGGTGCTGGCCCGGGTGCAGGTCTCGGGGCCTTT...TTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGGTTCCCCTGTCCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| CDS-3UTR GCA 90 bp | AGGTGGATGGGTGGATGGCAGGTGGATTCCATAAGAACAAGGGAGCTATTCCCAAAAGGCCCCGAGACCTaGACCCGGGCCAGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RWMGGWQVDSIRTRELFPKGPET*TRASTS Trigger: GGAGGTGCTGGCCCGGGTGCAGGTCTCGGGGCCTTT...TGGGAATAGCTCCCTTGTTCTTATGGAATCCACCTGCCATCCACCCATCCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCGGTATTTGGGTACCAATGGGATGCAGCCAGGAATGGCTCCTGGTGGGCACAGCACCACCAGGAATaGCACCCCCTCCAACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPVFGYQWDAARNGSWWAQHHQE*HPLQHQ Trigger: CTGGTGTTGGAGGGGGTGGCATTCCTGGTGGTGCTG...TGCCCACCAGGAGCCATTCCTGGCTGCATCCCATTGGTACCCAAATACCGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS-3UTR GCA 90 bp | AAGAGGTGGGGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGCTTTGCAGCAGCTGCTaGTGCAGGAGTTCCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRWGGETCSVRVAPGRTGLCSSC*CRSSSA Trigger: GGCGCTGGAACTCCTGCAGCAGCAGCTGCTGCAAAG...CCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACCCCACCTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS-3UTR CCA 90 bp | TTACAGTACTGCATGTGGGGACAACCAGCCCACACAACCCTTTGCACCCTAGGCCCGAGCTCCTGTTCCTaGGAGCACTCCGCCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LQYCMWGQPAHTTLCTLGPSSCS*EHSAWV Trigger: TACCCAGGCGGAGTGCTCCCAGGAACAGGAGCTCGG...GCCTAGGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| CDS-3UTR CCA 90 bp | TCCGGTATTTGGGTACCAATGGGATGCAGCCAGGAATGGCTCCTGGTGGGCAGGAGCACCACCTCCACCTaGAGCCTTGGCTTTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGIWVPMGCSQEWLLVGRSTTST*SLGFDS Trigger: GGAGTCAAAGCCAAGGCTCCAGGTGGAGGTGGTGCT...CCTGCCCACCAGGAGCCATTCCTGGCTGCATCCCATTGGTACCCAAATACCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS-3UTR GCA 90 bp | AGGTTGATAGTGGGTATGCCCAGCCAGCTTAGTGGTACTAGGCAGTCAAGATGGGGCAGCAGCTGCAGCTaGAGGGGTACCTGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLIVGMPSQLSGTRQSRWGSSCS*RGTCSW Trigger: CCAGGAGCAGGTACCCCTGCAGCTGCAGCTGCTGCC...CCATCTTGACTGCCTAGTACCACTAAGCTGGCTGGGCATACCCACTATCAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS-3UTR CCA 90 bp | AACTCCCAGGCCCCCAGCACCACCACCTGGATAAATGGGAGAAAGTCCAAAGCCTGGGAGCACTCCGCCTaGGTATACACCTGGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: NSQAPSTTTWINGRKSKAWEHSA*VYTWKT Trigger: GGTCTTCCAGGTGTATACCCAGGCGGAGTGCTCCCA...GGCTTTGGACTTTCTCCCATTTATCCAGGTGGTGGTGCTGGGGGCCTGGGAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
||
| CDS-3UTR TCA 90 bp | AGGTTGATAGTGGGTATGCCCAGCCAGCTTAGTGGTACTAGGCAGTCAAGATGGAGCAGCTGCAGCTGGTaGCACAGCTCCTGGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RLIVGMPSQLSGTRQSRWSSCSW*HSSWST Trigger: GGTGGACCAGGAGCTGTGTCACCAGCTGCAGCTGCT...CCATCTTGACTGCCTAGTACCACTAAGCTGGCTGGGCATACCCACTATCAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS-3UTR GCA 90 bp | CGGGGTTACAGTACTGCATGTGGGGACAACCAGCCCACACAACCCTTTGCACCCAAGTCCTCCAGGACCTaGTCCAAACGTTCCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGYSTACGDNQPTQPFAPKSSRT*SKRSQK Trigger: CTTCTGGGAACGTTTGGAGCAGGTCCTGGAGGACTT...GGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAACCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| CDS-3UTR GCA 90 bp | ATGCAGCCAGCGATCCAGGTACTGCTCCAGCTCCAAATCCAGGGACACCAGCACAAGTCCTCCAGGACCTaGTCCAAACGTTCCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MQPAIQVLLQLQIQGHQHKSSRT*SKRSQK Trigger: CTTCTGGGAACGTTTGGAGCAGGTCCTGGAGGACTT...GTGCTGGTGTCCCTGGATTTGGAGCTGGAGCAGTACCTGGATCGCTGGCTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGAACCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGCCAGCCTTGCCCCCTaGACCAGCTACTCCATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGTKERGIMSPNPSSRLPASLAP*TSYSIG Trigger: CCCTATGGAGTAGCTGGTGCAGGGGGCAAGGCTGGC...CGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGGTTCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS-3UTR GCA 90 bp | AGGTGGATGGGTGGATGGCAGGTGGATTCCATAAGAACAAGGGAGCTATTCCCACGGCACAGCTGGTACTaGACCTGGCAGTGCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RWMGGWQVDSIRTRELFPRHSWY*TWQCTW Trigger: CCAGGTGCACTGCCAGGTGCAGTACCAGCTGTGCCG...TGGGAATAGCTCCCTTGTTCTTATGGAATCCACCTGCCATCCACCCATCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS-3UTR GCA 90 bp | TCACCAAATCCATCGTCAAGGCTTCCGGTATTTGGGTACCAATGGGATGCAGCCGGCTGCCTTAGCAGCTaGAGCAGGGGACACACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPNPSSRLPVFGYQWDAAGCLSS*SRGHTS Trigger: GGAGGTGTGTCCCCTGCTGCAGCTGCTAAGGCAGCC...GGCTGCATCCCATTGGTACCCAAATACCGGAAGCCTTGACGATGGATTTGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS-3UTR CCA 90 bp | AGGTGGATGGGTGGATGGCAGGTGGATTCCATAAGAACAAGGGAGCTATTCCCACCAGGCTGCGCGGGATaGAGGAGGTTGAGCAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RWMGGWQVDSIRTRELFPPGCAG*RRLSKR Trigger: CCTCTTGCTCAACCTCCTCCATCCCGCGCAGCCTGG...TGGGAATAGCTCCCTTGTTCTTATGGAATCCACCTGCCATCCACCCATCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGGTGGGGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGAACTCCAACACCACCTaGGACTCCGCCAACTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KRWGGETCSVRVAPGRTGNSNTT*DSANSN Trigger: GTTGGAGTTGGCGGAGTCCCAGGTGGTGTTGGAGTT...CCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACCCCACCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS-3UTR CCA 90 bp | GCAGGGACAGGGGAACCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAAGGGCCCCCAACACCTaGGATGCCACCAACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGTGEPKREGSCHQIHRQRAPNT*DATNTR Trigger: CCTGGTGTTGGTGGCATCCCAGGTGTTGGGGGCCCT...TTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGGTTCCCCTGTCCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| 3UTR CAA 72 bp | CCACCAAGGCCACCTGCTGCTCCATATTTAGCAGCTTaGGATGCAGCCAGCGATCCAGGTACTGCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PPRPPAAPYLAA*DAASDPGTAPA Trigger: AGCTGGAGCAGTACCTGGATCGCTGGCTGCATCCAAAGCTGCTAAATATGGAGCAGCAGGTGGCCTTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| CDS-3UTR GCA 90 bp | TCACCAAATCCATCGTCAAGGCTTCCGGTATTTGGGTACCAATGGGATGCAGCCTTGGGTAGCCAGCCTTaGCCCCTGCACCAGCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: SPNPSSRLPVFGYQWDAALGSQP*PLHQLL Trigger: GAGTAGCTGGTGCAGGGGGCAAGGCTGGCTACCCAA...GGCTGCATCCCATTGGTACCCAAATACCGGAAGCCTTGACGATGGATTTGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR GCA 90 bp | GGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGTTACAGTACAGGAGTTCCAGCGCCTaGAATGCCTCCAATCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGETCSVRVAPGRTGLQYRSSSA*NASNPR Trigger: CCTGGGATTGGAGGCATTGCAGGCGCTGGAACTCCT...GTACTGTAACCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR GCA 90 bp | GCAGGGACAGGGGAACCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAAGCAGCAGCTGGGCTTaGACCTCCAAGTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGTGEPKREGSCHQIHRQSSSWA*TSKSCS Trigger: GGAGCAGGACTTGGAGGTGCAAGCCCAGCTGCTGCT...TTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGGTTCCCCTGTCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR GCA 90 bp | CTTCCGGTATTTGGGTACCAATGGGATGCAGCCAGGAATGGCTCCTGGTGGGCACTGGGCTTTGGCAGCTaGCTTAGCAGCAGATTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPVFGYQWDAARNGSWWALGFGS*LSSRFS Trigger: GCTAAATCTGCTGCTAAGGCAGCTGCCAAAGCCCAG...TGCCCACCAGGAGCCATTCCTGGCTGCATCCCATTGGTACCCAAATACCGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CCA 90 bp | ACAGGGGAACCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCCAGGCTGCGCGGGATaGAGGAGGTTGAGCAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGEPKREGSCHQIHRQGFPGCAG*RRLSKR Trigger: CCTCTTGCTCAACCTCCTCCATCCCGCGCAGCCTGG...GAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGGTTCCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGGGTAACCTGGTACTGCACCTaGCACCAGGCCTCCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RERDHVTKSIVKASGIWVTWYCT*HQASQG Trigger: GCCCTGGGAGGCCTGGTGCCAGGTGCAGTACCAGGT...TACCCAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CCA 90 bp | AAGAGGTGGGGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGCCCAGCACCACCACCTaGATAAATGGGAGAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRWGGETCSVRVAPGRTGPSTTT*INGRKS Trigger: GGACTTTCTCCCATTTATCCAGGTGGTGGTGCTGGG...CCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACCCCACCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CCA 90 bp | AGGTGGATGGGTGGATGGCAGGTGGATTCCATAAGAACAAGGGAGCTATTCCCAGGCACCTGGCTTAGGTaGTTTTCCTCCAGGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RWMGGWQVDSIRTRELFPGTWLR*FSSRSQ Trigger: CTGGGACCTGGAGGAAAACCACCTAAGCCAGGTGCC...TGGGAATAGCTCCCTTGTTCTTATGGAATCCACCTGCCATCCACCCATCCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS-3UTR CCA 90 bp | TTACAGTACTGCATGTGGGGACAACCAGCCCACACAACCCTTTGCACCCTAGGCTGCCAACTCCACCTCTaGCTCCGTATTTGGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQYCMWGQPAHTTLCTLGCQLHL*LRIWQL Trigger: AAGCTGCCAAATACGGAGCCAGAGGTGGAGTTGGCA...GCCTAGGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CCA 90 bp | GCAGGGACAGGGGAACCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAACCACCAAGGCCATACTaGGCAGCCTTAGCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGTGEPKREGSCHQIHRQPPRPY*AALAAA Trigger: AGCTGCTGCTAAGGCTGCCCAGTATGGCCTTGGTGG...TTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGGTTCCCCTGTCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CCA 90 bp | AGGGGAACCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGCACCTGGGAATGGCCTaGCTCCTAGGACACCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGTKERGIMSPNPSSRLPHLGMA*LLGHLQ Trigger: TTGGAGGTGTCCTAGGAGCCAGGCCATTCCCAGGTG...CGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGGTTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR GCA 90 bp | GGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGTTACAGTACCACCAACACCAGGAATaGCACCAACACCTGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: GGETCSVRVAPGRTGLQYHQHQE*HQHLGF Trigger: GAATCCCAGGTGTTGGTGGCATTCCTGGTGTTGGTG...GTACTGTAACCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR GCA 90 bp | AGGTGGATGGGTGGATGGCAGGTGGATTCCATAAGAACAAGGGAGCTATTCCCACAGCGATCCAGGTACTaGTCCAGCTCCAAATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RWMGGWQVDSIRTRELFPQRSRY*SSSKSR Trigger: CCTGGATTTGGAGCTGGAGCAGTACCTGGATCGCTG...TGGGAATAGCTCCCTTGTTCTTATGGAATCCACCTGCCATCCACCCATCCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGGGTACAGAGCTCCTGCCCCTaGGAAGGTGCCTGCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RERDHVTKSIVKASGIWVQSSCP*EGACRK Trigger: TTTCCTGCAGGCACCTTCCCAGGGGCAGGAGCTCTG...TACCCAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS-3UTR CCA 90 bp | TCTCCCCAATTAGCCACAAAAATAAACCCAAAGAGCACACCAACAATCAAACATGCTGCCGCCGCCGCCTaGGATCCGACCCCTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPQLATKINPKSTPTIKHAAAAA*DPTPVP Trigger: AGGGACAGGGGTCGGATCCCAGGCGGCGGCGGCAGC...ATGTTTGATTGTTGGTGTGCTCTTTGGGTTTATTTTTGTGGCTAATTGGGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CCA 90 bp | AAGAGGTGGGGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGCACCACCTGGATAAATaGGAGAAAGTCCAAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRWGGETCSVRVAPGRTGHHLDK*EKVQSQ Trigger: CTGGCTTTGGACTTTCTCCCATTTATCCAGGTGGTG...CCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACCCCACCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGGGTAAGCACCATACTTGGCTaGTTTAGCTGCTGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RERDHVTKSIVKASGIWVSTILG*FSCCRR Trigger: GCGGCGGCAGCAGCTAAAGCAGCCAAGTATGGTGCT...TACCCAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR GCA 90 bp | AGGTTGATAGTGGGTATGCCCAGCCAGCTTAGTGGTACTAGGCAGTCAAGATGGTGCACCTCCAAGTCCTaGTCCAGCTCCAACACCATA | + |
|
Preference number: 4 (lower is better) Translates to: RLIVGMPSQLSGTRQSRWCTSKS*SSSNTI Trigger: TATGGTGTTGGAGCTGGAGCAGGACTTGGAGGTGCA...CCATCTTGACTGCCTAGTACCACTAAGCTGGCTGGGCATACCCACTATCAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CCA 90 bp | AGGTTGATAGTGGGTATGCCCAGCCAGCTTAGTGGTACTAGGCAGTCAAGATGGTCCAATACCAGCCCCTaGATAATAGACTCCACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLIVGMPSQLSGTRQSRWSNTSP*IIDSTG Trigger: CCCGGTGGAGTCTATTATCCAGGGGCTGGTATTGGA...CCATCTTGACTGCCTAGTACCACTAAGCTGGCTGGGCATACCCACTATCAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS-3UTR CCA 90 bp | CCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGTGGGAGCACTCCGCCTaGGTATACACCTGGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: PKREGSCHQIHRQGFRYLWEHSA*VYTWKT Trigger: GGTCTTCCAGGTGTATACCCAGGCGGAGTGCTCCCA...CAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS-3UTR CCA 90 bp | GCAGGGACAGGGGAACCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAACAGTCCGTAGCCACCTaGCAGCTTTGGTGCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGTGEPKREGSCHQIHRQQSVAT*QLWCFD Trigger: ATCAAAGCACCAAAGCTGCCAGGTGGCTACGGACTG...TTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGGTTCCCCTGTCCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CCA 90 bp | CCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGTGGGATTCCAGCACCTaGGAGCCTAACTCCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKREGSCHQIHRQGFRYLWDSST*EPNSWS Trigger: GGACCAGGAGTTAGGCTCCCAGGTGCTGGAATCCCA...CAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR GCA 90 bp | CCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGTCCAAAGCCAGGTCTTaGTGCAACTCCTCCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKREGSCHQIHRQGFRYLSKARS*CNSSTW Trigger: CCAGGTGGAGGAGTTGCAGCAAGACCTGGCTTTGGA...CAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGGGTAAACTCCAACACCACCTaGGACTCCGCCAACTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RERDHVTKSIVKASGIWVNSNTT*DSANSN Trigger: GTTGGAGTTGGCGGAGTCCCAGGTGGTGTTGGAGTT...TACCCAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS-3UTR CCA 90 bp | AGGTTGATAGTGGGTATGCCCAGCCAGCTTAGTGGTACTAGGCAGTCAAGATGGAGGGCAATTTCCCATTaGTATAGGGCAGTCCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLIVGMPSQLSGTRQSRWRAISH*YRAVRS Trigger: GCTACGGACTGCCCTATACCAATGGGAAATTGCCCT...CCATCTTGACTGCCTAGTACCACTAAGCTGGCTGGGCATACCCACTATCAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGGGTAAAAGCCAGGTCTTGCTaGAACTCCTCCACCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RERDHVTKSIVKASGIWVKARSC*NSSTWE Trigger: TTCCCAGGTGGAGGAGTTGCAGCAAGACCTGGCTTT...TACCCAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGGGTAGCCTGGGTATACACCTaGAAGACCAACACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RERDHVTKSIVKASGIWVAWVYT*KTNTRN Trigger: GTTCCTGGTGTTGGTCTTCCAGGTGTATACCCAGGC...TACCCAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS-3UTR CCA 90 bp | TCTCCCCAATTAGCCACAAAAATAAACCCAAAGAGCACACCAACAATCAAACATAGGGGTACCTGCTCCTaGCACTCCACCAGCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPQLATKINPKSTPTIKHRGTCS*HSTSSR Trigger: CCGGGAGCTGGTGGAGTGCCAGGAGCAGGTACCCCT...ATGTTTGATTGTTGGTGTGCTCTTTGGGTTTATTTTTGTGGCTAATTGGGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR GCA 90 bp | CCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGACCTGGCAGCTTTGGTaGTTTGATGGGATAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PKREGSCHQIHRQGFRYLTWQLW*FDGITQ Trigger: CTGGGTTATCCCATCAAAGCACCAAAGCTGCCAGGT...CAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR GCA 90 bp | TCTCCCCAATTAGCCACAAAAATAAACCCAAAGAGCACACCAACAATCAAACATTGCAGCAGCTGCTGCTaGAGGAGTTCCAGCGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPQLATKINPKSTPTIKHCSSCC*RSSSAC Trigger: GCAGGCGCTGGAACTCCTGCAGCAGCAGCTGCTGCA...ATGTTTGATTGTTGGTGTGCTCTTTGGGTTTATTTTTGTGGCTAATTGGGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CCA 90 bp | TCTCCCCAATTAGCCACAAAAATAAACCCAAAGAGCACACCAACAATCAAACATGCGGCAGCTCTGTACTaGGCTTTGGCAGCTGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SPQLATKINPKSTPTIKHAAALY*ALAAAL Trigger: TAAGGCAGCTGCCAAAGCCCAGTACAGAGCTGCCGC...ATGTTTGATTGTTGGTGTGCTCTTTGGGTTTATTTTTGTGGCTAATTGGGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CCA 90 bp | TCTCCCCAATTAGCCACAAAAATAAACCCAAAGAGCACACCAACAATCAAACATAATGCCACCAACACCTaGGATTCCAGCACCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPQLATKINPKSTPTIKHNATNT*DSSTWE Trigger: CTCCCAGGTGCTGGAATCCCAGGTGTTGGTGGCATT...ATGTTTGATTGTTGGTGTGCTCTTTGGGTTTATTTTTGTGGCTAATTGGGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR GCA 90 bp | TCTCCCCAATTAGCCACAAAAATAAACCCAAAGAGCACACCAACAATCAAACATTTTAGCAGCTTTGGATaGAGCCAGCGATCCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SPQLATKINPKSTPTIKHFSSFG*SQRSRY Trigger: GTACCTGGATCGCTGGCTGCATCCAAAGCTGCTAAA...ATGTTTGATTGTTGGTGTGCTCTTTGGGTTTATTTTTGTGGCTAATTGGGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 90 bp | AGCTCCCGGCACAGCTGGTACTGCACCTGGCAGTGCACCTGGTACTaGACCTGGCACCAGGCCTCCCAGGGCTCCAGCTCCTCCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SSRHSWYCTWQCTWY*TWHQASQGSSSSST Trigger: GGTGCTGGAGGAGCTGGAGCCCTGGGAGGCCTGGTGCCAGGTGCAGTACCAGGTGCACTGCCAGGTGCAGTACCAGCTGTGCCGGGAGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 90 bp | TGGCACTCCACCAGCTCCCGGCACAGCTGGTACTGCACCTGGCAGTaGACCTGGTACTGCACCTGGCACCAGGCCTCCCAGGGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WHSTSSRHSWYCTWQ*TWYCTWHQASQGSS Trigger: GCTGGAGCCCTGGGAGGCCTGGTGCCAGGTGCAGTACCAGGTGCACTGCCAGGTGCAGTACCAGCTGTGCCGGGAGCTGGTGGAGTGCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS CCA 90 bp | TGCTCCTGGCACTCCACCAGCTCCCGGCACAGCTGGTACTGCACCTaGCAGTGCACCTGGTACTGCACCTGGCACCAGGCCTCCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CSWHSTSSRHSWYCT*QCTWYCTWHQASQG Trigger: GCCCTGGGAGGCCTGGTGCCAGGTGCAGTACCAGGTGCACTGCCAGGTGCAGTACCAGCTGTGCCGGGAGCTGGTGGAGTGCCAGGAGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 90 bp | GAGGACTCCAGCTCCCCCAGCACCATACTTGGCTGCTTTAGCTGCTaGCGCCGCCGCCTGGGATCCGACCCCTGTCCCTGTTGGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EDSSSPSTILGCFSC*RRRLGSDPCPCWVA Trigger: GGCTACCCAACAGGGACAGGGGTCGGATCCCAGGCGGCGGCGGCAGCAGCTAAAGCAGCCAAGTATGGTGCTGGGGGAGCTGGAGTCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS TCA 90 bp | GCACAGCTCCTGGAACCCCTCCAGGCTGCGCGGGATGGAGGAGGTTaGGCAAGAGGATCAGCAAGACGCCAGGCTGCGGGACTACCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AQLLEPLQAARDGGG*ARGSARRQAAGLPL Trigger: CAGCGGTAGTCCCGCAGCCTGGCGTCTTGCTGATCCTCTTGCTCAACCTCCTCCATCCCGCGCAGCCTGGAGGGGTTCCAGGAGCTGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS GCA 90 bp | AGGGAGGACTCCAGCTCCCCCAGCACCATACTTGGCTGCTTTAGCTaGTGCCGCCGCCGCCTGGGATCCGACCCCTGTCCCTGTTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: REDSSSPSTILGCFS*CRRRLGSDPCPCWV Trigger: TACCCAACAGGGACAGGGGTCGGATCCCAGGCGGCGGCGGCAGCAGCTAAAGCAGCCAAGTATGGTGCTGGGGGAGCTGGAGTCCTCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS CCA 90 bp | GACTCCACCGGGAACTCCACCAGGAAGTCCGCCAGGCACAGCTCCTaGAACCCCTCCAGGCTGCGCGGGATGGAGGAGGTTGAGCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DSTGNSTRKSARHSS*NPSRLRGMEEVEQE Trigger: CTCTTGCTCAACCTCCTCCATCCCGCGCAGCCTGGAGGGGTTCCAGGAGCTGTGCCTGGCGGACTTCCTGGTGGAGTTCCCGGTGGAGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS CCA 90 bp | GCCAACTCCAACACCACCTGGAACTCCACCAACGCCAACACCACCTaGGACTCCGCCAACGCCACCAAGCCCAGCCCCAGCTTTGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ANSNTTWNSTNANTT*DSANATKPSPSFGG Trigger: GCCGCCAAAGCTGGGGCTGGGCTTGGTGGCGTTGGCGGAGTCCCAGGTGGTGTTGGCGTTGGTGGAGTTCCAGGTGGTGTTGGAGTTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS CCA 90 bp | TTTAGCTGCTGCCGCCGCCGCCTGGGATCCGACCCCTGTCCCTGTTaGGTAGCCAGCCTTGCCCCCTGCACCAGCTACTCCATAGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FSCCRRRLGSDPCPC*VASLAPCTSYSIGQ Trigger: TTGCCCTATGGAGTAGCTGGTGCAGGGGGCAAGGCTGGCTACCCAACAGGGACAGGGGTCGGATCCCAGGCGGCGGCGGCAGCAGCTAAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 90 bp | CTGCAATGCCTCCAATCCCAGGAATTGCGCCAGCACCACCAGGAATaGCACCCCCTCCAACACCAGGGAGGACTCCAGCTCCCCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LQCLQSQELRQHHQE*HPLQHQGGLQLPQH Trigger: GTGCTGGGGGAGCTGGAGTCCTCCCTGGTGTTGGAGGGGGTGGCATTCCTGGTGGTGCTGGCGCAATTCCTGGGATTGGAGGCATTGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 90 bp | CCGCCGCCTGGGATCCGACCCCTGTCCCTGTTGGGTAGCCAGCCTTaGCCCCTGCACCAGCTACTCCATAGGGCAATTTCCCATTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: PPPGIRPLSLLGSQP*PLHQLLHRAISHWY Trigger: ATACCAATGGGAAATTGCCCTATGGAGTAGCTGGTGCAGGGGGCAAGGCTGGCTACCCAACAGGGACAGGGGTCGGATCCCAGGCGGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 90 bp | TGCTGCAGGAGTTCCAGCGCCTGCAATGCCTCCAATCCCAGGAATTaGGCCAGCACCACCAGGAATGCCACCCCCTCCAACACCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CCRSSSACNASNPRN*ASTTRNATPSNTRE Trigger: CTCCCTGGTGTTGGAGGGGGTGGCATTCCTGGTGGTGCTGGCGCAATTCCTGGGATTGGAGGCATTGCAGGCGCTGGAACTCCTGCAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 90 bp | TTTGGCGGCGGCAGCAGCAGCAGCTGGGCTTGCACCTCCAAGTCCTaGTCCAGCTCCAACACCATAGCCAGGAAAGCCACCAGCACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: FGGGSSSSWACTSKS*SSSNTIARKATSTN Trigger: GTTGGTGCTGGTGGCTTTCCTGGCTATGGTGTTGGAGCTGGAGCAGGACTTGGAGGTGCAAGCCCAGCTGCTGCTGCTGCCGCCGCCAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CAA 90 bp | AGCAGCTGCAGCAGGGGACACACCTCCACCAGCTCCCAGTCCACCGGCTCCCAGCAAATACCTGGAGCCTaGGCTTTGACTCCTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSCSRGHTSTSSQSTGSQQIPGA*ALTPVP Trigger: TGGCACAGGAGTCAAAGCCAAGGCTCCAGGTATTTG...CTGGGAGCCGGTGGACTGGGAGCTGGTGGAGGTGTGTCCCCTGCTGCAGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| CDS TCA 90 bp | CTGGGCTTTGGCAGCTGCCTTAGCAGCAGATTTAGCGGCAGCCGGTaGCCCTGCTCCTCCAAGACCGCCAGGACCAGCTCCAATACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LGFGSCLSSRFSGSR*PCSSKTARTSSNTS Trigger: ACTGGTATTGGAGCTGGTCCTGGCGGTCTTGGAGGAGCAGGGTCACCGGCTGCCGCTAAATCTGCTGCTAAGGCAGCTGCCAAAGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS CCA 90 bp | TCCGTAGCCACCTGGCAGCTTTGGTGCTTTGATGGGATAACCCAGTaGGACACCAGGCTGCTGACCCCCAAAGGGTCCGACCCCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SVATWQLWCFDGITQ*DTRLLTPKGSDPWD Trigger: ATCCCAGGGGTCGGACCCTTTGGGGGTCAGCAGCCTGGTGTCCCACTGGGTTATCCCATCAAAGCACCAAAGCTGCCAGGTGGCTACGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS CCA 90 bp | TCCAGCACCATACTTAGCAGCTTTGGCGGCGGCAGCAGCAGCAGCTaGGCTTGCACCTCCAAGTCCTGCTCCAGCTCCAACACCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSTILSSFGGGSSSS*ACTSKSCSSSNTIA Trigger: GGCTATGGTGTTGGAGCTGGAGCAGGACTTGGAGGTGCAAGCCCAGCTGCTGCTGCTGCCGCCGCCAAAGCTGCTAAGTATGGTGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS TCA 90 bp | TCCACCGGGAATCCCACCAACACCAAATACCTGGAGCCTTGGCTTTaGCTCCTGTGCCAGTGGGAACTCCAGGGAGCACCCCCACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: STGNPTNTKYLEPWL*LLCQWELQGAPPHQ Trigger: CTGGTGTGGGGGTGCTCCCTGGAGTTCCCACTGGCACAGGAGTCAAAGCCAAGGCTCCAGGTATTTGGTGTTGGTGGGATTCCCGGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201856.2 |
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| CDS GCA 90 bp | CGACTTGGGGCACCACAGCACCTGTCGAGACTCCTAAGCCACCGATaGCACCAATACCACCAACACCGCCAGGGACTCCACCAACTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RLGAPQHLSRLLSHR*HQYHQHRQGLHQLQ Trigger: TTGGAGTTGGTGGAGTCCCTGGCGGTGTTGGTGGTATTGGTGGCATCGGTGGCTTAGGAGTCTCGACAGGTGCTGTGGTGCCCCAAGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS GCA 90 bp | CTGGGATCCGACCCCTGTCCCTGTTGGGTAGCCAGCCTTGCCCCCTaGACCAGCTACTCCATAGGGCAATTTCCCATTGGTATAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGSDPCPCWVASLAP*TSYSIGQFPIGIGQ Trigger: CTGCCCTATACCAATGGGAAATTGCCCTATGGAGTAGCTGGTGCAGGGGGCAAGGCTGGCTACCCAACAGGGACAGGGGTCGGATCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS CCA 90 bp | TCCACCCACAATGCCTGGACCTCCAATACCAGGGCCCCCAACACCTaGGATGCCACCAACACCAGGAATGCCACCAACACCTGGGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: STHNAWTSNTRAPNT*DATNTRNATNTWDS Trigger: GGAATCCCAGGTGTTGGTGGCATTCCTGGTGTTGGTGGCATCCCAGGTGTTGGGGGCCCTGGTATTGGAGGTCCAGGCATTGTGGGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CAA 90 bp | GGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGTTACAGTACCGACCCCTGTCCCTGTaGGGTAGCCAGCCTTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGETCSVRVAPGRTGLQYRPLSL*GSQPCP Trigger: GGGGCAAGGCTGGCTACCCAACAGGGACAGGGGTCG...GTACTGTAACCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS CCA 90 bp | GAACCGAGCTCCTGTTCCTGGGAGCACTCCGCCTGGGTATACACCTaGAAGACCAACACCAGGAACTTTCCCAGGCTTTCCTCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EPSSCSWEHSAWVYT*KTNTRNFPRLSSSS Trigger: GGAGCTGGAGGAAAGCCTGGGAAAGTTCCTGGTGTTGGTCTTCCAGGTGTATACCCAGGCGGAGTGCTCCCAGGAACAGGAGCTCGGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS-3UTR CAA 90 bp | CTTCCGGTATTTGGGTACCAATGGGATGCAGCCAGGAATGGCTCCTGGTGGGCACCTCCACCTGGAGCCTaGGCTTTGACTCCTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPVFGYQWDAARNGSWWAPPPGA*ALTPVP Trigger: TGGCACAGGAGTCAAAGCCAAGGCTCCAGGTGGAGG...TGCCCACCAGGAGCCATTCCTGGCTGCATCCCATTGGTACCCAAATACCGGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CAA 90 bp | GGCTCCAGGAAGAACGGGGTTACAGTACTGCATGTGGGGACAACCAGCCCACACGTCCAAAGCCAGGTCTaGCTGCAACTCCTCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSRKNGVTVLHVGTTSPHVQSQV*LQLLHL Trigger: CAGGTGGAGGAGTTGCAGCAAGACCTGGCTTTGGAC...GTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAACCCCGTTCTTCCTGGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CAA 90 bp | TTACAGTACTGCATGTGGGGACAACCAGCCCACACAACCCTTTGCACCCTAGGCCCATACTTAGCAGCTTaGGCGGCGGCAGCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LQYCMWGQPAHTTLCTLGPYLAA*AAAAAA Trigger: TGCTGCTGCTGCCGCCGCCAAAGCTGCTAAGTATGG...GCCTAGGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 90 bp | TCCATACTTAGCAGCCTTAGCAGCAGCCTTTGCAGCAGCTGCTGCTaGAGGAGTTCCAGCGCCTGCAATGCCTCCAATCCCAGGAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: SILSSLSSSLCSSCC*RSSSACNASNPRNC Trigger: GCAATTCCTGGGATTGGAGGCATTGCAGGCGCTGGAACTCCTGCAGCAGCAGCTGCTGCAAAGGCTGCTGCTAAGGCTGCTAAGTATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 90 bp | AGCTCCATACTTAGCAGCCTTAGCAGCAGCCTTTGCAGCAGCTGCTaGTGCAGGAGTTCCAGCGCCTGCAATGCCTCCAATCCCAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSILSSLSSSLCSSC*CRSSSACNASNPRN Trigger: ATTCCTGGGATTGGAGGCATTGCAGGCGCTGGAACTCCTGCAGCAGCAGCTGCTGCAAAGGCTGCTGCTAAGGCTGCTAAGTATGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CAA 90 bp | GGTGGTGAGACATGCTCTGTAAGAGTGGCTCCAGGAAGAACGGGGTTACAGTACCCTGGAGCCTTGGCTTaGACTCCTGTGCCAGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGETCSVRVAPGRTGLQYPGALA*TPVPVG Trigger: TCCCACTGGCACAGGAGTCAAAGCCAAGGCTCCAGG...GTACTGTAACCCCGTTCTTCCTGGAGCCACTCTTACAGAGCATGTCTCACCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS-3UTR CAA 90 bp | TTACAGTACTGCATGTGGGGACAACCAGCCCACACAACCCTTTGCACCCTAGGCCTCCAATCCCAGGAATaGCGCCAGCACCACCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQYCMWGQPAHTTLCTLGLQSQE*RQHHQE Trigger: TTCCTGGTGGTGCTGGCGCAATTCCTGGGATTGGAG...GCCTAGGGTGCAAAGGGTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CAA 90 bp | AGGTGGATGGGTGGATGGCAGGTGGATTCCATAAGAACAAGGGAGCTATTCCCACCTGGAGCCTTGGCTTaGACTCCTGTGCCAGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RWMGGWQVDSIRTRELFPPGALA*TPVPVG Trigger: TCCCACTGGCACAGGAGTCAAAGCCAAGGCTCCAGG...TGGGAATAGCTCCCTTGTTCTTATGGAATCCACCTGCCATCCACCCATCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS-3UTR CAA 90 bp | AGGTGGATGGGTGGATGGCAGGTGGATTCCATAAGAACAAGGGAGCTATTCCCACCCCCAGCACCATACTaGGCTGCTTTAGCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RWMGGWQVDSIRTRELFPPPAPY*AALAAA Trigger: GGCAGCAGCTAAAGCAGCCAAGTATGGTGCTGGGGG...TGGGAATAGCTCCCTTGTTCTTATGGAATCCACCTGCCATCCACCCATCCACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CAA 90 bp | CCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGCAGCAGCAGCTGGGCTaGCACCTCCAAGTCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PKREGSCHQIHRQGFRYLQQQLG*HLQVLL Trigger: GAGCAGGACTTGGAGGTGCAAGCCCAGCTGCTGCTG...CAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGGGTACCTCTGGCTCCGTATTaGGCAGCTTTGGCAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RERDHVTKSIVKASGIWVPLAPY*AALAAA Trigger: AGCTGCTGCCAAAGCTGCCAAATACGGAGCCAGAGG...TACCCAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CAA 90 bp | CCAAAGAGAGAGGGATCATGTCACCAAATCCATCGTCAAGGCTTCCGGTATTTGGCTCTGTACTGGGCTTaGGCAGCTGCCTTAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PKREGSCHQIHRQGFRYLALYWA*AAALAA Trigger: TGCTGCTAAGGCAGCTGCCAAAGCCCAGTACAGAGC...CAAATACCGGAAGCCTTGACGATGGATTTGGTGACATGATCCCTCTCTCTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS-3UTR CAA 90 bp | TCTCCCCAATTAGCCACAAAAATAAACCCAAAGAGCACACCAACAATCAAACATAAAGCAGCCCCCACCTaGGTATCCCAGGGCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPQLATKINPKSTPTIKHKAAPT*VSQGSK Trigger: CTTGGAGCCCTGGGATACCAAGGTGGGGGCTGCTTT...ATGTTTGATTGTTGGTGTGCTCTTTGGGTTTATTTTTGTGGCTAATTGGGGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 72 bp | CCCGGGCACCAGAGCTCCTGCCCCTGGGAAGGTGCCTaGAGGAAAGGCCCCGAGACCTGCACCCGGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGHQSSCPWEGA*RKGPETCTRAS Trigger: GCTGGCCCGGGTGCAGGTCTCGGGGCCTTTCCTGCAGGCACCTTCCCAGGGGCAGGAGCTCTGGTGCCCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS GCA 72 bp | CCCTGGGAAGGTGCCTGCAGGAAAGGCCCCGAGACCTaGACCCGGGCCAGCACCTCCAAGTCCTCCAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: PWEGACRKGPET*TRASTSKSSRT Trigger: GGTCCTGGAGGACTTGGAGGTGCTGGCCCGGGTGCAGGTCTCGGGGCCTTTCCTGCAGGCACCTTCCCAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS GCA 72 bp | AGCTCCCCCAGCACCATACTTGGCTGCTTTAGCTGCTaGCGCCGCCGCCTGGGATCCGACCCCTGTCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSPSTILGCFSC*RRRLGSDPCPC Trigger: ACAGGGACAGGGGTCGGATCCCAGGCGGCGGCGGCAGCAGCTAAAGCAGCCAAGTATGGTGCTGGGGGAGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 72 bp | AGGGAGGACTCCAGCTCCCCCAGCACCATACTTGGCTaGTTTAGCTGCTGCCGCCGCCGCCTGGGATCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: REDSSSPSTILG*FSCCRRRLGSD Trigger: GTCGGATCCCAGGCGGCGGCGGCAGCAGCTAAAGCAGCCAAGTATGGTGCTGGGGGAGCTGGAGTCCTCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS CCA 72 bp | GGACTCCGCCAACGCCACCAAGCCCAGCCCCAGCTTTaGCGGCAGCTTTATAAGCCGCAGCAGCCCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLRQRHQAQPQL*RQLYKPQQPLL Trigger: CAGCAGGGGCTGCTGCGGCTTATAAAGCTGCCGCCAAAGCTGGGGCTGGGCTTGGTGGCGTTGGCGGAGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS CCA 72 bp | CACTCCACCAGCTCCCGGCACAGCTGGTACTGCACCTaGCAGTGCACCTGGTACTGCACCTGGCACCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HSTSSRHSWYCT*QCTWYCTWHQA Trigger: GGCCTGGTGCCAGGTGCAGTACCAGGTGCACTGCCAGGTGCAGTACCAGCTGTGCCGGGAGCTGGTGGAGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 72 bp | AGTCCGCCAGGCACAGCTCCTGGAACCCCTCCAGGCTaGGCGGGATGGAGGAGGTTGAGCAAGAGGATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPPGTAPGTPPG*AGWRRLSKRIS Trigger: GCTGATCCTCTTGCTCAACCTCCTCCATCCCGCGCAGCCTGGAGGGGTTCCAGGAGCTGTGCCTGGCGGACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS GCA 72 bp | TCCACCAGGAACCCCACCAACACCAGGACCCAAACCTaGTTTGGCGGCTGCTTTAGCGGCGGCGGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: STRNPTNTRTQT*FGGCFSGGGSS Trigger: GCTGCTGCCGCCGCCGCTAAAGCAGCCGCCAAAGCAGGTTTGGGTCCTGGTGTTGGTGGGGTTCCTGGTGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS CCA 72 bp | AACACCACCTGGAACTCCACCAACGCCAACACCACCTaGGACTCCGCCAACGCCACCAAGCCCAGCCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NTTWNSTNANTT*DSANATKPSPS Trigger: GCTGGGGCTGGGCTTGGTGGCGTTGGCGGAGTCCCAGGTGGTGTTGGCGTTGGTGGAGTTCCAGGTGGTGTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS CAA 72 bp | CCAGGAACCCCACCAACACCAGGACCCAAACCTGCTTaGGCGGCTGCTTTAGCGGCGGCGGCAGCAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGTPPTPGPKPA*AAALAAAAAAA Trigger: TGCAGCTGCTGCCGCCGCCGCTAAAGCAGCCGCCAAAGCAGGTTTGGGTCCTGGTGTTGGTGGGGTTCCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS CCA 72 bp | GGCACAGCTCCTGGAACCCCTCCAGGCTGCGCGGGATaGAGGAGGTTGAGCAAGAGGATCAGCAAGACGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GTAPGTPPGCAG*RRLSKRISKTP Trigger: TGGCGTCTTGCTGATCCTCTTGCTCAACCTCCTCCATCCCGCGCAGCCTGGAGGGGTTCCAGGAGCTGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS CAA 90 bp | CCAGGGACACCAGCTCCAAGCCCAGCGGCAGCTCTGTACTGGGCTTaGGCAGCTGCCTTAGCAGCAGATTTAGCGGCAGCCGGTGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGTPAPSPAAALYWA*AAALAADLAAAGDP Trigger: AGGGTCACCGGCTGCCGCTAAATCTGCTGCTAAGGCAGCTGCCAAAGCCCAGTACAGAGCTGCCGCTGGGCTTGGAGCTGGTGTCCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 72 bp | GGGATCCGACCCCTGTCCCTGTTGGGTAGCCAGCCTTaGCCCCTGCACCAGCTACTCCATAGGGCAATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GIRPLSLLGSQP*PLHQLLHRAIS Trigger: GGAAATTGCCCTATGGAGTAGCTGGTGCAGGGGGCAAGGCTGGCTACCCAACAGGGACAGGGGTCGGATCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 72 bp | CTCCAATCCCAGGAATTGCGCCAGCACCACCAGGAATaGCACCCCCTCCAACACCAGGGAGGACTCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LQSQELRQHHQE*HPLQHQGGLQL Trigger: GAGCTGGAGTCCTCCCTGGTGTTGGAGGGGGTGGCATTCCTGGTGGTGCTGGCGCAATTCCTGGGATTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS CAA 72 bp | CCAGCTCCAAGCCCAGCGGCAGCTCTGTACTGGGCTTaGGCAGCTGCCTTAGCAGCAGATTTAGCGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PAPSPAAALYWA*AAALAADLAAA Trigger: GGCTGCCGCTAAATCTGCTGCTAAGGCAGCTGCCAAAGCCCAGTACAGAGCTGCCGCTGGGCTTGGAGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 72 bp | AGTTCCAGCGCCTGCAATGCCTCCAATCCCAGGAATTaGGCCAGCACCACCAGGAATGCCACCCCCTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSACNASNPRN*ASTTRNATPSN Trigger: GTTGGAGGGGGTGGCATTCCTGGTGGTGCTGGCGCAATTCCTGGGATTGGAGGCATTGCAGGCGCTGGAACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 72 bp | CTGGACCTCCAATACCAGGGCCCCCAACACCTGGGATaGCACCAACACCAGGAATGCCACCAACACCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LDLQYQGPQHLG*HQHQECHQHLG Trigger: TCCCAGGTGTTGGTGGCATTCCTGGTGTTGGTGGCATCCCAGGTGTTGGGGGCCCTGGTATTGGAGGTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS CCA 72 bp | ACCTGGCAGCTTTGGTGCTTTGATGGGATAACCCAGTaGGACACCAGGCTGCTGACCCCCAAAGGGTCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: TWQLWCFDGITQ*DTRLLTPKGSD Trigger: GTCGGACCCTTTGGGGGTCAGCAGCCTGGTGTCCCACTGGGTTATCCCATCAAAGCACCAAAGCTGCCAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS GCA 72 bp | CTTAGCAGCCTTAGCAGCAGCCTTTGCAGCAGCTGCTaGTGCAGGAGTTCCAGCGCCTGCAATGCCTCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LSSLSSSLCSSC*CRSSSACNASN Trigger: ATTGGAGGCATTGCAGGCGCTGGAACTCCTGCAGCAGCAGCTGCTGCAAAGGCTGCTGCTAAGGCTGCTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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| CDS GCA 72 bp | ATACTTAGCAGCCTTAGCAGCAGCCTTTGCAGCAGCTaGTGCTGCAGGAGTTCCAGCGCCTGCAATGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ILSSLSSSLCSS*CCRSSSACNAS Trigger: GGAGGCATTGCAGGCGCTGGAACTCCTGCAGCAGCAGCTGCTGCAAAGGCTGCTGCTAAGGCTGCTAAGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
||
| CDS CCA 72 bp | TCCTGTTCCTGGGAGCACTCCGCCTGGGTATACACCTaGAAGACCAACACCAGGAACTTTCCCAGGCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCSWEHSAWVYT*KTNTRNFPRLS Trigger: GGAAAGCCTGGGAAAGTTCCTGGTGTTGGTCTTCCAGGTGTATACCCAGGCGGAGTGCTCCCAGGAACAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
||
| CDS CCA 72 bp | AGGGAACCGAGCTCCTGTTCCTGGGAGCACTCCGCCTaGGTATACACCTGGAAGACCAACACCAGGAACTTT | + |
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Preference number: 6 (lower is better) Translates to: REPSSCSWEHSA*VYTWKTNTRNF Trigger: AAAGTTCCTGGTGTTGGTCTTCCAGGTGTATACCCAGGCGGAGTGCTCCCAGGAACAGGAGCTCGGTTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015138.13 ENSMUST00000201856.2 |
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| CDS CCA 72 bp | CCCCTGCACCAGCTACTCCATAGGGCAATTTCCCATTaGTATAGGGCAGTCCGTAGCCACCTGGCAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: PLHQLLHRAISH*YRAVRSHLAAL Trigger: CAAAGCTGCCAGGTGGCTACGGACTGCCCTATACCAATGGGAAATTGCCCTATGGAGTAGCTGGTGCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015138.13 |
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