Pregenerated sensors for ELMOD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035151Ensembl transcript IDs: ENSMUST00000053902.4, ENSMUST00000139041.2, ENSMUST00000177594.8
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TCCCTGACAGAGTCATGTGCCCTCTGCTCCAAGGACAGGACATCTTaGCAAGAGCTAAAGACACAAAGAAAGCCTCAGAGGGCACCCTGT | + |
Preference number: 1 (lower is better) Translates to: SLTESCALCSKDRTS*QELKTQRKPQRAPC Trigger: ACAGGGTGCCCTCTGAGGCTTTCTTTGTGTCTTTAGCTCTTGTCAAGATGTCCTGTCCTTGGAGCAGAGGGCACATGACTCTGTCAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR CCA 90 bp | TTGAACCCATGCTCTGCAACACAGTGCTATACAACACTCCAGCTGTaGCTCTCTGATGGGACATCCGTACTGCACATGACTTTCTCATGC | + |
Preference number: 1 (lower is better) Translates to: LNPCSATQCYTTLQL*LSDGTSVLHMTFSC Trigger: GCATGAGAAAGTCATGTGCAGTACGGATGTCCCATCAGAGAGCCACAGCTGGAGTGTTGTATAGCACTGTGTTGCAGAGCATGGGTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR TCA 90 bp | AGTGACCAGAAAAATCAAAAGGAAGCCATGATTGTCCACCTTCCCTaGCAGAGTCATGTGCCCTCTGCTCCAAGGACAGGACATCTTGAC | + |
Preference number: 1 (lower is better) Translates to: SDQKNQKEAMIVHLP*QSHVPSAPRTGHLD Trigger: GTCAAGATGTCCTGTCCTTGGAGCAGAGGGCACATGACTCTGTCAGGGAAGGTGGACAATCATGGCTTCCTTTTGATTTTTCTGGTCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR GCA 90 bp | ACTTGCTGCCCTCCTGAGACTTTGGAGAATAAAGCTATACAAAAATaGACAGTCATGATCCAGGCTATGGTAGCATGTCCCAGCCCACTA | + |
Preference number: 1 (lower is better) Translates to: TCCPPETLENKAIQK*TVMIQAMVACPSPL Trigger: TAGTGGGCTGGGACATGCTACCATAGCCTGGATCATGACTGTGCATTTTTGTATAGCTTTATTCTCCAAAGTCTCAGGAGGGCAGCAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR GCA 90 bp | TCTTCCTTAAGGAAAAGCAATTTGAACCCATGCTCTGCAACACAGTaGTATACAACACTCCAGCTGTGGCTCTCTGATGGGACATCCGTA | + |
Preference number: 1 (lower is better) Translates to: SSLRKSNLNPCSATQ*YTTLQLWLSDGTSV Trigger: TACGGATGTCCCATCAGAGAGCCACAGCTGGAGTGTTGTATAGCACTGTGTTGCAGAGCATGGGTTCAAATTGCTTTTCCTTAAGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR CCA 90 bp | ACTAACACAGCTGCTTTCCATGGAGGACTTCACACTATAATACAGTaGACAACAATGGTAACCATGGGCTCCTTGTTAGGGTTTTGGTAC | + |
Preference number: 1 (lower is better) Translates to: TNTAAFHGGLHTIIQ*TTMVTMGSLLGFWY Trigger: GTACCAAAACCCTAACAAGGAGCCCATGGTTACCATTGTTGTCCACTGTATTATAGTGTGAAGTCCTCCATGGAAAGCAGCTGTGTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR CAA 90 bp | TTCCCTGACAGAGTCATGTGCCCTCTGCTCCAAGGACAGGACATCTaGACAAGAGCTAAAGACACAAAGAAAGCCTCAGAGGGCACCCTG | + |
Preference number: 2 (lower is better) Translates to: FPDRVMCPLLQGQDI*TRAKDTKKASEGTL Trigger: CAGGGTGCCCTCTGAGGCTTTCTTTGTGTCTTTAGCTCTTGTCAAGATGTCCTGTCCTTGGAGCAGAGGGCACATGACTCTGTCAGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR GCA 90 bp | CAAAAATGCACAGTCATGATCCAGGCTATGGTAGCATGTCCCAGCCCACTAACCCCTGACAGAGTCATGTaGCCTCTGCTCCAAGGACAG | + |
Preference number: 2 (lower is better) Translates to: QKCTVMIQAMVACPSPLTPDRVM*PLLQGQ Trigger: CTGTCCTTGGAGCAGAGGGCACATGACTCTGTCAGG...GGTTAGTGGGCTGGGACATGCTACCATAGCCTGGATCATGACTGTGCATTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR GCA 90 bp | CCCCAGATGCACCATCCTTTGTGGATTAGAGTAGAGCACCTGTGCTGGGGATGCTGCTCTGCAACACAGTaGTATACAACACTCCAGCTG | + |
Preference number: 2 (lower is better) Translates to: PQMHHPLWIRVEHLCWGCCSATQ*YTTLQL Trigger: CAGCTGGAGTGTTGTATAGCACTGTGTTGCAGAGCA...GCATCCCCAGCACAGGTGCTCTACTCTAATCCACAAAGGATGGTGCATCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR GCA 90 bp | ATCCCCTCACATAGAATCCTCGACAATACTTGCTGCCCTCCTGAGACTTTGGAGGAGTCATGTGCCCTCTaGTCCAAGGACAGGACATCT | + |
Preference number: 2 (lower is better) Translates to: IPSHRILDNTCCPPETLEESCAL*SKDRTS Trigger: AGATGTCCTGTCCTTGGAGCAGAGGGCACATGACTC...CTCCAAAGTCTCAGGAGGGCAGCAAGTATTGTCGAGGATTCTATGTGAGGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR CCA 90 bp | CTCCTTTCTAAACACACAGGCGGGGTTCTCCCAGGGGGCTCTGAGGAAGGTTCCAAACAAATACTGACCTaGAGTAAATGCCTAGACTCC | + |
Preference number: 2 (lower is better) Translates to: LLSKHTGGVLPGGSEEGSKQILT*SKCLDS Trigger: GGAGTCTAGGCATTTACTCCAGGTCAGTATTTGTTT...GGAACCTTCCTCAGAGCCCCCTGGGAGAACCCCGCCTGTGTGTTTAGAAAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR TCA 90 bp | CCCCAGATGCACCATCCTTTGTGGATTAGAGTAGAGCACCTGTGCTGGGGATGCCGTTTTAAAACTGCATaGAGTTCTGATGTCTGCTGC | + |
Preference number: 2 (lower is better) Translates to: PQMHHPLWIRVEHLCWGCRFKTA*SSDVCC Trigger: GCAGCAGACATCAGAACTTCATGCAGTTTTAAAACG...GCATCCCCAGCACAGGTGCTCTACTCTAATCCACAAAGGATGGTGCATCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR CCA 90 bp | CCCCAGATGCACCATCCTTTGTGGATTAGAGTAGAGCACCTGTGCTGGGGATGCCACAGCTGCTTTCCATaGAGGACTTCACACTATAAT | + |
Preference number: 2 (lower is better) Translates to: PQMHHPLWIRVEHLCWGCHSCFP*RTSHYN Trigger: ATTATAGTGTGAAGTCCTCCATGGAAAGCAGCTGTG...GCATCCCCAGCACAGGTGCTCTACTCTAATCCACAAAGGATGGTGCATCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR TCA 90 bp | CCCCAGATGCACCATCCTTTGTGGATTAGAGTAGAGCACCTGTGCTGGGGATGCTTCCAGAGCAAACAATaGCCCTGCAGAATTTTCAAA | + |
Preference number: 2 (lower is better) Translates to: PQMHHPLWIRVEHLCWGCFQSKQ*PCRIFK Trigger: TTTGAAAATTCTGCAGGGTCATTGTTTGCTCTGGAA...GCATCCCCAGCACAGGTGCTCTACTCTAATCCACAAAGGATGGTGCATCTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR TCA 90 bp | ATCCCCTCACATAGAATCCTCGACAATACTTGCTGCCCTCCTGAGACTTTGGAGATCAAAAGGAAGCCATaGTTGTCCACCTTCCCTGAC | + |
Preference number: 2 (lower is better) Translates to: IPSHRILDNTCCPPETLEIKRKP*LSTFPD Trigger: GTCAGGGAAGGTGGACAATCATGGCTTCCTTTTGAT...CTCCAAAGTCTCAGGAGGGCAGCAAGTATTGTCGAGGATTCTATGTGAGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR CCA 90 bp | CCCCAGATGCACCATCCTTTGTGGATTAGAGTAGAGCACCTGTGCTGGGGATGCGCCCTCCTGAGACTTTaGAGAATAAAGCTATACAAA | + |
Preference number: 2 (lower is better) Translates to: PQMHHPLWIRVEHLCWGCALLRL*RIKLYK Trigger: TTTGTATAGCTTTATTCTCCAAAGTCTCAGGAGGGC...GCATCCCCAGCACAGGTGCTCTACTCTAATCCACAAAGGATGGTGCATCTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR TCA 90 bp | CAACACAGTGCTATACAACACTCCAGCTGTGGCTCTCTGATGGGACATCCGTACAAGGACAGGACATCTTaGCAAGAGCTAAAGACACAA | + |
Preference number: 2 (lower is better) Translates to: QHSAIQHSSCGSLMGHPYKDRTS*QELKTQ Trigger: TTGTGTCTTTAGCTCTTGTCAAGATGTCCTGTCCTT...GTACGGATGTCCCATCAGAGAGCCACAGCTGGAGTGTTGTATAGCACTGTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR GCA 90 bp | ACAACAATGGTAACCATGGGCTCCTTGTTAGGGTTTTGGTACACAATGCATCCTGAGTCATGTGCCCTCTaGTCCAAGGACAGGACATCT | + |
Preference number: 2 (lower is better) Translates to: TTMVTMGSLLGFWYTMHPESCAL*SKDRTS Trigger: AGATGTCCTGTCCTTGGAGCAGAGGGCACATGACTC...AGGATGCATTGTGTACCAAAACCCTAACAAGGAGCCCATGGTTACCATTGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR CAA 90 bp | GATCTTTCTCAGAGTGTGAAAGAGCCATCTTCATTTAAAAGCCATTaGTGTGGAGAGGCAGTACACATGAACGTGACGACAAAGCCTCCC | + |
Preference number: 2 (lower is better) Translates to: DLSQSVKEPSSFKSH*CGEAVHMNVTTKPP Trigger: GGGAGGCTTTGTCGTCACGTTCATGTGTACTGCCTCTCCACACAAATGGCTTTTAAATGAAGATGGCTCTTTCACACTCTGAGAAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR GCA 90 bp | GAGCCATCTTCATTTAAAAGCCATTTGTGTGGAGAGGCAGTACACATGAACGTGCAAAGCCTCCCCAGATaGACCATCCTTTGTGGATTA | + |
Preference number: 2 (lower is better) Translates to: EPSSFKSHLCGEAVHMNVQSLPR*TILCGL Trigger: TAATCCACAAAGGATGGTGCATCTGGGGAGGCTTTG...CACGTTCATGTGTACTGCCTCTCCACACAAATGGCTTTTAAATGAAGATGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR CCA 90 bp | CAAAAATGCACAGTCATGATCCAGGCTATGGTAGCATGTCCCAGCCCACTAACCAGGGTAAGGGACCTTTaGAGAACAGTGTATAAACAA | + |
Preference number: 2 (lower is better) Translates to: QKCTVMIQAMVACPSPLTRVRDL*RTVYKQ Trigger: TTGTTTATACACTGTTCTCCAAAGGTCCCTTACCCT...GGTTAGTGGGCTGGGACATGCTACCATAGCCTGGATCATGACTGTGCATTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR CCA 90 bp | AATGGGATGAGTTTGGGTGAAATGGTGGCTTCTTGTAAAATATACTTTGAGTCTCTGGGGATGCAGCTGTaGCCCCCAGTTATGAGCACA | + |
Preference number: 2 (lower is better) Translates to: NGMSLGEMVASCKIYFESLGMQL*PPVMST Trigger: TGTGCTCATAACTGGGGGCCACAGCTGCATCCCCAG...AGACTCAAAGTATATTTTACAAGAAGCCACCATTTCACCCAAACTCATCCCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177594.8 |
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3UTR CAA 90 bp | GAGCTAAAGACACAAAGAAAGCCTCAGAGGGCACCCTGTGCTGATTaGCCTAGAAATAAAAAGACAAAGGGCATTCAAAAGCCACTTCCA | + |
Preference number: 2 (lower is better) Translates to: ELKTQRKPQRAPCAD*PRNKKTKGIQKPLP Trigger: TGGAAGTGGCTTTTGAATGCCCTTTGTCTTTTTATTTCTAGGCAAATCAGCACAGGGTGCCCTCTGAGGCTTTCTTTGTGTCTTTAGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR GCA 90 bp | GAGCCATCTTCATTTAAAAGCCATTTGTGTGGAGAGGCAGTACACATGAACGTGGCAGAAATGAAGAGCTaGTTTTCACACCCAAGAAAT | + |
Preference number: 2 (lower is better) Translates to: EPSSFKSHLCGEAVHMNVAEMKS*FSHPRN Trigger: ATTTCTTGGGTGTGAAAAGCAGCTCTTCATTTCTGC...CACGTTCATGTGTACTGCCTCTCCACACAAATGGCTTTTAAATGAAGATGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR CCA 90 bp | ACAACAATGGTAACCATGGGCTCCTTGTTAGGGTTTTGGTACACAATGCATCCTGCCCTCCTGAGACTTTaGAGAATAAAGCTATACAAA | + |
Preference number: 2 (lower is better) Translates to: TTMVTMGSLLGFWYTMHPALLRL*RIKLYK Trigger: TTTGTATAGCTTTATTCTCCAAAGTCTCAGGAGGGC...AGGATGCATTGTGTACCAAAACCCTAACAAGGAGCCCATGGTTACCATTGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR TCA 90 bp | GGTGAAATGGTGGCTTCTTGTAAAATATACTTTGAGTCTCAGAGCCACTTACTCAGGGACAGAATGATATaGATGATGGCTAACACTGAG | + |
Preference number: 2 (lower is better) Translates to: GEMVASCKIYFESQSHLLRDRMI*MMANTE Trigger: CTCAGTGTTAGCCATCATTCATATCATTCTGTCCCT...GAGTAAGTGGCTCTGAGACTCAAAGTATATTTTACAAGAAGCCACCATTTCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177594.8 |
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3UTR-3UTR TCA 90 bp | TTTTTGTTTTGCTCTGAGAACAAATTGCTAAAGCATGCCAAGAGGAAACCACCCTTCCAGAGCAAACAATaGCCCTGCAGAATTTTCAAA | + |
Preference number: 2 (lower is better) Translates to: FLFCSENKLLKHAKRKPPFQSKQ*PCRIFK Trigger: TTTGAAAATTCTGCAGGGTCATTGTTTGCTCTGGAA...GGGTGGTTTCCTCTTGGCATGCTTTAGCAATTTGTTCTCAGAGCAAAACAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR TCA 90 bp | TCAACTGTTAAATGTTGTGGTTCTATTCTTATGCTGCTCTTGTCACTGGTGAAAAACTGCATGAAGTTCTaGTGTCTGCTGCAAGTAAGG | + |
Preference number: 2 (lower is better) Translates to: STVKCCGSILMLLLSLVKNCMKF*CLLQVR Trigger: CCTTACTTGCAGCAGACATCAGAACTTCATGCAGTT...TTTCACCAGTGACAAGAGCAGCATAAGAATAGAACCACAACATTTAACAGTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR CAA 90 bp | TGGTCTAGGATCCATGATACCCAAGTGTCTCCCATGTTTAAAAGATaGTCTTTCAGAGCATCTCAACTGTTAAATGTTGTGGTTCTATTC | + |
Preference number: 2 (lower is better) Translates to: WSRIHDTQVSPMFKR*SFRASQLLNVVVLF Trigger: GAATAGAACCACAACATTTAACAGTTGAGATGCTCTGAAAGACAATCTTTTAAACATGGGAGACACTTGGGTATCATGGATCCTAGACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR GCA 90 bp | TTTTTGTTTTGCTCTGAGAACAAATTGCTAAAGCATGCCAAGAGGAAACCACCCCACCCTGTGCTGATTTaGCTAGAAATAAAAAGACAA | + |
Preference number: 2 (lower is better) Translates to: FLFCSENKLLKHAKRKPPHPVLI*LEIKRQ Trigger: TTGTCTTTTTATTTCTAGGCAAATCAGCACAGGGTG...GGGTGGTTTCCTCTTGGCATGCTTTAGCAATTTGTTCTCAGAGCAAAACAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR TCA 90 bp | TCAACTGTTAAATGTTGTGGTTCTATTCTTATGCTGCTCTTGTCACTGGTGAAAACTGTAAACATACACTaGTTGTCCGCTAGCTTTCTT | + |
Preference number: 2 (lower is better) Translates to: STVKCCGSILMLLLSLVKTVNIH*LSASFL Trigger: AAGAAAGCTAGCGGACAATCAGTGTATGTTTACAGT...TTTCACCAGTGACAAGAGCAGCATAAGAATAGAACCACAACATTTAACAGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR TCA 90 bp | AATGGGATGAGTTTGGGTGAAATGGTGGCTTCTTGTAAAATATACTTTGAGTCTACTGTAAACATACACTaGTTGTCCGCTAGCTTTCTT | + |
Preference number: 2 (lower is better) Translates to: NGMSLGEMVASCKIYFESTVNIH*LSASFL Trigger: AAGAAAGCTAGCGGACAATCAGTGTATGTTTACAGT...AGACTCAAAGTATATTTTACAAGAAGCCACCATTTCACCCAAACTCATCCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177594.8 |
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3UTR CAA 90 bp | AGCATCTCAACTGTTAAATGTTGTGGTTCTATTCTTATGCTGCTCTaGTCACTGGTGAAATATTTTCATCGTCACATGTACAAGAATCCA | + |
Preference number: 2 (lower is better) Translates to: SISTVKCCGSILMLL*SLVKYFHRHMYKNP Trigger: TGGATTCTTGTACATGTGACGATGAAAATATTTCACCAGTGACAAGAGCAGCATAAGAATAGAACCACAACATTTAACAGTTGAGATGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR CCA 90 bp | ACATCACAAACAAAAGGACGTCACATCTCACACTATTGCTTTTACATGAAATTCAGGGTAAGGGACCTTTaGAGAACAGTGTATAAACAA | + |
Preference number: 2 (lower is better) Translates to: TSQTKGRHISHYCFYMKFRVRDL*RTVYKQ Trigger: TTGTTTATACACTGTTCTCCAAAGGTCCCTTACCCT...GAATTTCATGTAAAAGCAATAGTGTGAGATGTGACGTCCTTTTGTTTGTGATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR CCA 90 bp | ACATCACAAACAAAAGGACGTCACATCTCACACTATTGCTTTTACATGAAATTCTATTTACAAAGAGCCTaGTCTAGGATCCATGATACC | + |
Preference number: 2 (lower is better) Translates to: TSQTKGRHISHYCFYMKFYLQRA*SRIHDT Trigger: GGTATCATGGATCCTAGACCAGGCTCTTTGTAAATA...GAATTTCATGTAAAAGCAATAGTGTGAGATGTGACGTCCTTTTGTTTGTGATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR GCA 90 bp | GACAGAAAACATGAACAAATTGTGAGAAAACAGCAAACTTTCCGCTATCACACAAAACTATGTTTCAAATaGAGTCCAGATTTTCTCAGC | + |
Preference number: 2 (lower is better) Translates to: DRKHEQIVRKQQTFRYHTKLCFK*SPDFLS Trigger: GCTGAGAAAATCTGGACTGCATTTGAAACATAGTTT...TGTGTGATAGCGGAAAGTTTGCTGTTTTCTCACAATTTGTTCATGTTTTCTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR CCA 72 bp | GTGACGACAAAGCCTCCCCAGATGCACCATCCTTTGTaGATTAGAGTAGAGCACCTGTGCTGGGGATGCAGC | + |
Preference number: 3 (lower is better) Translates to: VTTKPPQMHHPL*IRVEHLCWGCS Trigger: GCTGCATCCCCAGCACAGGTGCTCTACTCTAATCCACAAAGGATGGTGCATCTGGGGAGGCTTTGTCGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR-3UTR CAA 90 bp | CCCCAGATGCACCATCCTTTGTGGATTAGAGTAGAGCACCTGTGCTGGGGATGCAGTGGGAAGACAGGCTaGACAGAAAACATGAACAAA | + |
Preference number: 3 (lower is better) Translates to: PQMHHPLWIRVEHLCWGCSGKTG*TENMNK Trigger: TTTGTTCATGTTTTCTGTCAAGCCTGTCTTCCCACT...GCATCCCCAGCACAGGTGCTCTACTCTAATCCACAAAGGATGGTGCATCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR TCA 72 bp | AAAAATCAAAAGGAAGCCATGATTGTCCACCTTCCCTaGCAGAGTCATGTGCCCTCTGCTCCAAGGACAGGA | + |
Preference number: 3 (lower is better) Translates to: KNQKEAMIVHLP*QSHVPSAPRTG Trigger: TCCTGTCCTTGGAGCAGAGGGCACATGACTCTGTCAGGGAAGGTGGACAATCATGGCTTCCTTTTGATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR GCA 72 bp | AGGAAAAGCAATTTGAACCCATGCTCTGCAACACAGTaGTATACAACACTCCAGCTGTGGCTCTCTGATGGG | + |
Preference number: 3 (lower is better) Translates to: RKSNLNPCSATQ*YTTLQLWLSDG Trigger: CCCATCAGAGAGCCACAGCTGGAGTGTTGTATAGCACTGTGTTGCAGAGCATGGGTTCAAATTGCTTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR GCA 72 bp | CAAAGCTCCATCTTCTATGCTGTTGCTCCCCTCTGCTaGAGAAATGAAGAGCTGCTTTTCACACCCAAGAAA | + |
Preference number: 3 (lower is better) Translates to: QSSIFYAVAPLC*RNEELLFTPKK Trigger: TTTCTTGGGTGTGAAAAGCAGCTCTTCATTTCTGCAGCAGAGGGGAGCAACAGCATAGAAGATGGAGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR CCA 72 bp | GCTGCTTTCCATGGAGGACTTCACACTATAATACAGTaGACAACAATGGTAACCATGGGCTCCTTGTTAGGG | + |
Preference number: 3 (lower is better) Translates to: AAFHGGLHTIIQ*TTMVTMGSLLG Trigger: CCCTAACAAGGAGCCCATGGTTACCATTGTTGTCCACTGTATTATAGTGTGAAGTCCTCCATGGAAAGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR CCA 72 bp | GTGTATGAATCACTTCTACCTTTGGTGAAAACGGGGTaGAATGGGATGAGTTTGGGTGAAATGGTGGCTTCT | + |
Preference number: 3 (lower is better) Translates to: VYESLLPLVKTG*NGMSLGEMVAS Trigger: AGAAGCCACCATTTCACCCAAACTCATCCCATTCCACCCCGTTTTCACCAAAGGTAGAAGTGATTCATACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177594.8 |
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3UTR-3UTR CAA 90 bp | CTGCTCCAAGGACAGGACATCTTGACAAGAGCTAAAGACACAAAGAAAGCCTCAGCACCCTGTGCTGATTaGCCTAGAAATAAAAAGACA | + |
Preference number: 3 (lower is better) Translates to: LLQGQDILTRAKDTKKASAPCAD*PRNKKT Trigger: TGTCTTTTTATTTCTAGGCAAATCAGCACAGGGTGC...TGAGGCTTTCTTTGTGTCTTTAGCTCTTGTCAAGATGTCCTGTCCTTGGAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR GCA 72 bp | CCTCCTGAGACTTTGGAGAATAAAGCTATACAAAAATaGACAGTCATGATCCAGGCTATGGTAGCATGTCCC | + |
Preference number: 3 (lower is better) Translates to: PPETLENKAIQK*TVMIQAMVACP Trigger: GGGACATGCTACCATAGCCTGGATCATGACTGTGCATTTTTGTATAGCTTTATTCTCCAAAGTCTCAGGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR GCA 72 bp | ATCTTCCTTAAGGAAAAGCAATTTGAACCCATGCTCTaGAACACAGTGCTATACAACACTCCAGCTGTGGCT | + |
Preference number: 3 (lower is better) Translates to: IFLKEKQFEPML*NTVLYNTPAVA Trigger: AGCCACAGCTGGAGTGTTGTATAGCACTGTGTTGCAGAGCATGGGTTCAAATTGCTTTTCCTTAAGGAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
||
3UTR-3UTR CAA 90 bp | GAGCCATCTTCATTTAAAAGCCATTTGTGTGGAGAGGCAGTACACATGAACGTGGCACCCTGTGCTGATTaGCCTAGAAATAAAAAGACA | + |
Preference number: 3 (lower is better) Translates to: EPSSFKSHLCGEAVHMNVAPCAD*PRNKKT Trigger: TGTCTTTTTATTTCTAGGCAAATCAGCACAGGGTGC...CACGTTCATGTGTACTGCCTCTCCACACAAATGGCTTTTAAATGAAGATGGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
||
3UTR CCA 72 bp | ACAACAATGGTAACCATGGGCTCCTTGTTAGGGTTTTaGTACACAATGCATCCTAAAACCTGGGTGACAAAA | + |
Preference number: 3 (lower is better) Translates to: TTMVTMGSLLGF*YTMHPKTWVTK Trigger: TTTTGTCACCCAGGTTTTAGGATGCATTGTGTACCAAAACCCTAACAAGGAGCCCATGGTTACCATTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
||
3UTR TCA 72 bp | ACTAGTGACAGTCAAGCTCCCAGAAGATCAGAACTTTaGAGCTGGAATTGGCTAACACATCAGTTCACTATA | + |
Preference number: 3 (lower is better) Translates to: TSDSQAPRRSEL*SWNWLTHQFTI Trigger: TATAGTGAACTGATGTGTTAGCCAATTCCAGCTTCAAAGTTCTGATCTTCTGGGAGCTTGACTGTCACTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR GCA 72 bp | ATTAGAATCCCCTCACATAGAATCCTCGACAATACTTaGTGCCCTCCTGAGACTTTGGAGAATAAAGCTATA | + |
Preference number: 3 (lower is better) Translates to: IRIPSHRILDNT*CPPETLENKAI Trigger: TATAGCTTTATTCTCCAAAGTCTCAGGAGGGCAGCAAGTATTGTCGAGGATTCTATGTGAGGGGATTCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
||
3UTR GCA 72 bp | GTTTTATCTTCCTTAAGGAAAAGCAATTTGAACCCATaGTCTGCAACACAGTGCTATACAACACTCCAGCTG | + |
Preference number: 3 (lower is better) Translates to: VLSSLRKSNLNP*SATQCYTTLQL Trigger: CAGCTGGAGTGTTGTATAGCACTGTGTTGCAGAGCATGGGTTCAAATTGCTTTTCCTTAAGGAAGATAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
||
3UTR-3UTR CAA 90 bp | AATGGGATGAGTTTGGGTGAAATGGTGGCTTCTTGTAAAATATACTTTGAGTCTAGTGGGAAGACAGGCTaGACAGAAAACATGAACAAA | + |
Preference number: 3 (lower is better) Translates to: NGMSLGEMVASCKIYFESSGKTG*TENMNK Trigger: TTTGTTCATGTTTTCTGTCAAGCCTGTCTTCCCACT...AGACTCAAAGTATATTTTACAAGAAGCCACCATTTCACCCAAACTCATCCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177594.8 |
||
3UTR-3UTR CAA 90 bp | CTGTACTGTTACATTTATTTACAAAGAGCCTGGTCTAGGATCCATGATACCCAATTAAGGAAAAGCAATTaGAACCCATGCTCTGCAACA | + |
Preference number: 3 (lower is better) Translates to: LYCYIYLQRAWSRIHDTQLRKSN*NPCSAT Trigger: TGTTGCAGAGCATGGGTTCAAATTGCTTTTCCTTAA...TTGGGTATCATGGATCCTAGACCAGGCTCTTTGTAAATAAATGTAACAGTACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR CCA 72 bp | TTAACAAAACATAGAACTACTCTACCAACGTCAATGTaGTTGTTGGGTCCTACCTCCACTACATTTAAACTT | + |
Preference number: 3 (lower is better) Translates to: LTKHRTTLPTSM*LLGPTSTTFKL Trigger: AAGTTTAAATGTAGTGGAGGTAGGACCCAACAACCACATTGACGTTGGTAGAGTAGTTCTATGTTTTGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
||
3UTR GCA 72 bp | GTAACTTTCTTGTACTTCAATGCCATTACTACCAATTaGTACATTGTAATTTTACAAGTCCTAGACACAGGG | + |
Preference number: 3 (lower is better) Translates to: VTFLYFNAITTN*YIVILQVLDTG Trigger: CCCTGTGTCTAGGACTTGTAAAATTACAATGTAGCAATTGGTAGTAATGGCATTGAAGTACAAGAAAGTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR CAA 72 bp | AACGTGACGACAAAGCCTCCCCAGATGCACCATCCTTaGTGGATTAGAGTAGAGCACCTGTGCTGGGGATGC | + |
Preference number: 4 (lower is better) Translates to: NVTTKPPQMHHP*WIRVEHLCWGC Trigger: GCATCCCCAGCACAGGTGCTCTACTCTAATCCACAAAGGATGGTGCATCTGGGGAGGCTTTGTCGTCACGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR TCA 90 bp | AACCATCACCTTCCTAGGCAAAGCTCCATCTTCTATGCTGTTGCTCCCCTCTGCTACCCTAATTTGGGGTaGTTTGAGCGGGAGAGAATC | + |
Preference number: 4 (lower is better) Translates to: NHHLPRQSSIFYAVAPLCYPNLG*FERERI Trigger: GATTCTCTCCCGCTCAAATCACCCCAAATTAGGGTA...GCAGAGGGGAGCAACAGCATAGAAGATGGAGCTTTGCCTAGGAAGGTGATGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
||
CDS-3UTR CCA 90 bp | GAGCCATCTTCATTTAAAAGCCATTTGTGTGGAGAGGCAGTACACATGAACGTGTGTCTGCCCACTGCTTaGAGATCCGGGCCGTCAACT | + |
Preference number: 4 (lower is better) Translates to: EPSSFKSHLCGEAVHMNVCLPTA*RSGPST Trigger: AGTTGACGGCCCGGATCTCCAAGCAGTGGGCAGACA...CACGTTCATGTGTACTGCCTCTCCACACAAATGGCTTTTAAATGAAGATGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR CCA 90 bp | CCCCAGATGCACCATCCTTTGTGGATTAGAGTAGAGCACCTGTGCTGGGGATGCAAGAATACCCTAATTTaGGGTGATTTGAGCGGGAGA | + |
Preference number: 4 (lower is better) Translates to: PQMHHPLWIRVEHLCWGCKNTLI*GDLSGR Trigger: TCTCCCGCTCAAATCACCCCAAATTAGGGTATTCTT...GCATCCCCAGCACAGGTGCTCTACTCTAATCCACAAAGGATGGTGCATCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR CAA 72 bp | AGAGTCATGTGCCCTCTGCTCCAAGGACAGGACATCTaGACAAGAGCTAAAGACACAAAGAAAGCCTCAGAG | + |
Preference number: 4 (lower is better) Translates to: RVMCPLLQGQDI*TRAKDTKKASE Trigger: CTCTGAGGCTTTCTTTGTGTCTTTAGCTCTTGTCAAGATGTCCTGTCCTTGGAGCAGAGGGCACATGACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR TCA 90 bp | CTGCTCCAAGGACAGGACATCTTGACAAGAGCTAAAGACACAAAGAAAGCCTCAGTATGCCCATGCCTCTaGAGTCTGTTTTGGGATCGT | + |
Preference number: 4 (lower is better) Translates to: LLQGQDILTRAKDTKKASVCPCL*SLFWDR Trigger: ACGATCCCAAAACAGACTTCAGAGGCATGGGCATAC...TGAGGCTTTCTTTGTGTCTTTAGCTCTTGTCAAGATGTCCTGTCCTTGGAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR TCA 90 bp | AAGTTCCAAACTGTAGTTCATGTACCTCCGGAAGGGCTCTTTGGAAGGGTAAGGTACCCTAATTTGGGGTaGTTTGAGCGGGAGAGAATC | + |
Preference number: 4 (lower is better) Translates to: KFQTVVHVPPEGLFGRVRYPNLG*FERERI Trigger: GATTCTCTCCCGCTCAAATCACCCCAAATTAGGGTA...CCTTACCCTTCCAAAGAGCCCTTCCGGAGGTACATGAACTACAGTTTGGAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR CCA 90 bp | CAACACAGTGCTATACAACACTCCAGCTGTGGCTCTCTGATGGGACATCCGTACCGTCAACTTTTTCGTTaGCATCAGAAGACTCCAAAG | + |
Preference number: 4 (lower is better) Translates to: QHSAIQHSSCGSLMGHPYRQLFR*HQKTPK Trigger: CTTTGGAGTCTTCTGATGCCAACGAAAAAGTTGACG...GTACGGATGTCCCATCAGAGAGCCACAGCTGGAGTGTTGTATAGCACTGTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR GCA 90 bp | CTGCTCCAAGGACAGGACATCTTGACAAGAGCTAAAGACACAAAGAAAGCCTCACATTTCCCAGTCATCTaGCGTAAGAGCCATTTCATC | + |
Preference number: 4 (lower is better) Translates to: LLQGQDILTRAKDTKKASHFPVI*RKSHFI Trigger: GATGAAATGGCTCTTACGGCAGATGACTGGGAAATG...TGAGGCTTTCTTTGTGTCTTTAGCTCTTGTCAAGATGTCCTGTCCTTGGAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR CCA 90 bp | TCTTATGCTGCTCTTGTCACTGGTGAAATATTTTCATCGTCACATGTACAAGAATGTCTGCCCACTGCTTaGAGATCCGGGCCGTCAACT | + |
Preference number: 4 (lower is better) Translates to: SYAALVTGEIFSSSHVQECLPTA*RSGPST Trigger: AGTTGACGGCCCGGATCTCCAAGCAGTGGGCAGACA...TTCTTGTACATGTGACGATGAAAATATTTCACCAGTGACAAGAGCAGCATAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR CCA 90 bp | CTGCTCCAAGGACAGGACATCTTGACAAGAGCTAAAGACACAAAGAAAGCCTCACGTCAACTTTTTCGTTaGCATCAGAAGACTCCAAAG | + |
Preference number: 4 (lower is better) Translates to: LLQGQDILTRAKDTKKASRQLFR*HQKTPK Trigger: CTTTGGAGTCTTCTGATGCCAACGAAAAAGTTGACG...TGAGGCTTTCTTTGTGTCTTTAGCTCTTGTCAAGATGTCCTGTCCTTGGAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR GCA 90 bp | TCAAGCTCCCAGAAGATCAGAACTTTGAAGCTGGAATTGGCTAACACATCAGTTCATTTCCCAGTCATCTaGCGTAAGAGCCATTTCATC | + |
Preference number: 4 (lower is better) Translates to: SSSQKIRTLKLELANTSVHFPVI*RKSHFI Trigger: GATGAAATGGCTCTTACGGCAGATGACTGGGAAATG...AACTGATGTGTTAGCCAATTCCAGCTTCAAAGTTCTGATCTTCTGGGAGCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR CAA 72 bp | ACACAAAGAAAGCCTCAGAGGGCACCCTGTGCTGATTaGCCTAGAAATAAAAAGACAAAGGGCATTCAAAAG | + |
Preference number: 4 (lower is better) Translates to: TQRKPQRAPCAD*PRNKKTKGIQK Trigger: CTTTTGAATGCCCTTTGTCTTTTTATTTCTAGGCAAATCAGCACAGGGTGCCCTCTGAGGCTTTCTTTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR TCA 90 bp | TCTTATGCTGCTCTTGTCACTGGTGAAATATTTTCATCGTCACATGTACAAGAAGTATGCCCATGCCTCTaGAGTCTGTTTTGGGATCGT | + |
Preference number: 4 (lower is better) Translates to: SYAALVTGEIFSSSHVQEVCPCL*SLFWDR Trigger: ACGATCCCAAAACAGACTTCAGAGGCATGGGCATAC...TTCTTGTACATGTGACGATGAAAATATTTCACCAGTGACAAGAGCAGCATAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR CAA 72 bp | AGAATCCTCGACAATACTTGCTGCCCTCCTGAGACTTaGGAGAATAAAGCTATACAAAAATGCACAGTCATG | + |
Preference number: 4 (lower is better) Translates to: RILDNTCCPPET*ENKAIQKCTVM Trigger: CATGACTGTGCATTTTTGTATAGCTTTATTCTCCAAAGTCTCAGGAGGGCAGCAAGTATTGTCGAGGATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR CCA 90 bp | TTTTTGTTTTGCTCTGAGAACAAATTGCTAAAGCATGCCAAGAGGAAACCACCCGTACATAATGCTTTCTaGCTCTTCCTCAAGCCAAAA | + |
Preference number: 4 (lower is better) Translates to: FLFCSENKLLKHAKRKPPVHNAF*LFLKPK Trigger: TTTTGGCTTGAGGAAGAGCCAGAAAGCATTATGTAC...GGGTGGTTTCCTCTTGGCATGCTTTAGCAATTTGTTCTCAGAGCAAAACAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR CCA 90 bp | GGTGAAATGGTGGCTTCTTGTAAAATATACTTTGAGTCTCAGAGCCACTTACTCGTACATAATGCTTTCTaGCTCTTCCTCAAGCCAAAA | + |
Preference number: 4 (lower is better) Translates to: GEMVASCKIYFESQSHLLVHNAF*LFLKPK Trigger: TTTTGGCTTGAGGAAGAGCCAGAAAGCATTATGTAC...GAGTAAGTGGCTCTGAGACTCAAAGTATATTTTACAAGAAGCCACCATTTCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177594.8 |
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3UTR CAA 72 bp | GTTTGGGTGAAATGGTGGCTTCTTGTAAAATATACTTaGAGTCTCAGAGCCACTTACTCTGAGCCAATATCA | + |
Preference number: 4 (lower is better) Translates to: VWVKWWLLVKYT*SLRATYSEPIS Trigger: TGATATTGGCTCAGAGTAAGTGGCTCTGAGACTCAAAGTATATTTTACAAGAAGCCACCATTTCACCCAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177594.8 |
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3UTR CAA 72 bp | ATCCATGATACCCAAGTGTCTCCCATGTTTAAAAGATaGTCTTTCAGAGCATCTCAACTGTTAAATGTTGTG | + |
Preference number: 4 (lower is better) Translates to: IHDTQVSPMFKR*SFRASQLLNVV Trigger: CACAACATTTAACAGTTGAGATGCTCTGAAAGACAATCTTTTAAACATGGGAGACACTTGGGTATCATGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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3UTR CAA 72 bp | ACAAAACATAGAACTACTCTACCAACGTCAATGTGGTaGTTGGGTCCTACCTCCACTACATTTAAACTTTTA | + |
Preference number: 4 (lower is better) Translates to: TKHRTTLPTSMW*LGPTSTTFKLL Trigger: TAAAAGTTTAAATGTAGTGGAGGTAGGACCCAACAACCACATTGACGTTGGTAGAGTAGTTCTATGTTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS CCA 90 bp | AATGTCTGCCCACTGCTTGGAGATCCGGGCCGTCAACTTTTTCGTTaGCATCAGAAGACTCCAAAGCTTGAGGAGCATCTTCTCGTGCTG | + |
Preference number: 5 (lower is better) Translates to: NVCPLLGDPGRQLFR*HQKTPKLEEHLLVL Trigger: CAGCACGAGAAGATGCTCCTCAAGCTTTGGAGTCTTCTGATGCCAACGAAAAAGTTGACGGCCCGGATCTCCAAGCAGTGGGCAGACATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053902.4 ENSMUST00000139041.2 ENSMUST00000177594.8 |
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CDS GCA 90 bp | AAGTCTGTTTTGGGATCGTCACCTTGGAAACCAATGTCTGCCCACTaGTTGGAGATCCGGGCCGTCAACTTTTTCGTTGGCATCAGAAGA | + |
Preference number: 5 (lower is better) Translates to: KSVLGSSPWKPMSAH*LEIRAVNFFVGIRR Trigger: TCTTCTGATGCCAACGAAAAAGTTGACGGCCCGGATCTCCAAGCAGTGGGCAGACATTGGTTTCCAAGGTGACGATCCCAAAACAGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053902.4 ENSMUST00000139041.2 ENSMUST00000177594.8 |
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CDS CCA 90 bp | TTCATAGACAAGGTAACAGTAAAACTGGTGGAAGTGCTCCATCGTTaGTACCCCAGGGACAAAGTTGTAGAGGTGAAGCTTCAGGGCCTC | + |
Preference number: 5 (lower is better) Translates to: FIDKVTVKLVEVLHR*YPRDKVVEVKLQGL Trigger: GAGGCCCTGAAGCTTCACCTCTACAACTTTGTCCCTGGGGTACCAACGATGGAGCACTTCCACCAGTTTTACTGTTACCTTGTCTATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR CAA 90 bp | CAACACAGTGCTATACAACACTCCAGCTGTGGCTCTCTGATGGGACATCCGTACAAAGTGAGCACAGCATaGCAATCCATCAAGAGTCCT | + |
Preference number: 5 (lower is better) Translates to: QHSAIQHSSCGSLMGHPYKVSTA*QSIKSP Trigger: AGGACTCTTGATGGATTGCAATGCTGTGCTCACTTT...GTACGGATGTCCCATCAGAGAGCCACAGCTGGAGTGTTGTATAGCACTGTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR CAA 90 bp | CTGCTCCAAGGACAGGACATCTTGACAAGAGCTAAAGACACAAAGAAAGCCTCATGCAGATCTGAAAACTaGTGTCCTTCTCGGAGCAGA | + |
Preference number: 5 (lower is better) Translates to: LLQGQDILTRAKDTKKASCRSEN*CPSRSR Trigger: TCTGCTCCGAGAAGGACACAAGTTTTCAGATCTGCA...TGAGGCTTTCTTTGTGTCTTTAGCTCTTGTCAAGATGTCCTGTCCTTGGAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR CAA 90 bp | ACAACAATGGTAACCATGGGCTCCTTGTTAGGGTTTTGGTACACAATGCATCCTAGAAGACTCCAAAGCTaGAGGAGCATCTTCTCGTGC | + |
Preference number: 5 (lower is better) Translates to: TTMVTMGSLLGFWYTMHPRRLQS*RSIFSC Trigger: GCACGAGAAGATGCTCCTCAAGCTTTGGAGTCTTCT...AGGATGCATTGTGTACCAAAACCCTAACAAGGAGCCCATGGTTACCATTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS GCA 90 bp | GGTAGAGCTGTTTATAGCCAGTTATCTGCAGTAAGCACGTCCGCATaGAGATCTGAAAACTTGTGTCCTTCTCGGAGCAGATGTTCTTTT | + |
Preference number: 5 (lower is better) Translates to: GRAVYSQLSAVSTSA*RSENLCPSRSRCSF Trigger: AAAAGAACATCTGCTCCGAGAAGGACACAAGTTTTCAGATCTGCATGCGGACGTGCTTACTGCAGATAACTGGCTATAAACAGCTCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053902.4 ENSMUST00000139041.2 ENSMUST00000177594.8 |
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CDS TCA 90 bp | GTGAGCACAGCATTGCAATCCATCAAGAGTCCTTTGATCCGCTCGTaGAACTTCTCTCTGTACAAGTTGAAGTACATAATGCTTTCTGGC | + |
Preference number: 5 (lower is better) Translates to: VSTALQSIKSPLIRS*NFSLYKLKYIMLSG Trigger: GCCAGAAAGCATTATGTACTTCAACTTGTACAGAGAGAAGTTTCACGAGCGGATCAAAGGACTCTTGATGGATTGCAATGCTGTGCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS CCA 90 bp | GTTCACTCTGGGCAACTCGTGTTGCATTCTGTAGGACCTTATTCTTaGAATATGTCAAGGAATTTTCTATTCTGTAGGTCCTCTGTGCCC | + |
Preference number: 5 (lower is better) Translates to: VHSGQLVLHSVGPYS*NMSRNFLFCRSSVP Trigger: GGGCACAGAGGACCTACAGAATAGAAAATTCCTTGACATATTCCAAGAATAAGGTCCTACAGAATGCAACACGAGTTGCCCAGAGTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053902.4 ENSMUST00000139041.2 ENSMUST00000177594.8 |
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CDS-3UTR CAA 90 bp | TTTTTGTTTTGCTCTGAGAACAAATTGCTAAAGCATGCCAAGAGGAAACCACCCTTTGGGATCGTCACCTaGGAAACCAATGTCTGCCCA | + |
Preference number: 5 (lower is better) Translates to: FLFCSENKLLKHAKRKPPFGIVT*ETNVCP Trigger: TGGGCAGACATTGGTTTCCAAGGTGACGATCCCAAA...GGGTGGTTTCCTCTTGGCATGCTTTAGCAATTTGTTCTCAGAGCAAAACAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS-3UTR CAA 90 bp | GAGCCATCTTCATTTAAAAGCCATTTGTGTGGAGAGGCAGTACACATGAACGTGAAAGTGAGCACAGCATaGCAATCCATCAAGAGTCCT | + |
Preference number: 5 (lower is better) Translates to: EPSSFKSHLCGEAVHMNVKVSTA*QSIKSP Trigger: AGGACTCTTGATGGATTGCAATGCTGTGCTCACTTT...CACGTTCATGTGTACTGCCTCTCCACACAAATGGCTTTTAAATGAAGATGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS CCA 90 bp | TTCTTTTCCTTCATGATGTTCGCTATACACCTGTCCAGTTCACTCTaGGCAACTCGTGTTGCATTCTGTAGGACCTTATTCTTGGAATAT | + |
Preference number: 5 (lower is better) Translates to: FFSFMMFAIHLSSSL*ATRVAFCRTLFLEY Trigger: ATATTCCAAGAATAAGGTCCTACAGAATGCAACACGAGTTGCCCAGAGTGAACTGGACAGGTGTATAGCGAACATCATGAAGGAAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053902.4 ENSMUST00000139041.2 ENSMUST00000177594.8 |
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CDS-3UTR CAA 90 bp | AATGGGATGAGTTTGGGTGAAATGGTGGCTTCTTGTAAAATATACTTTGAGTCTTGCAGATCTGAAAACTaGTGTCCTTCTCGGAGCAGA | + |
Preference number: 5 (lower is better) Translates to: NGMSLGEMVASCKIYFESCRSEN*CPSRSR Trigger: TCTGCTCCGAGAAGGACACAAGTTTTCAGATCTGCA...AGACTCAAAGTATATTTTACAAGAAGCCACCATTTCACCCAAACTCATCCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177594.8 |
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CDS-3UTR CAA 90 bp | ACATCACAAACAAAAGGACGTCACATCTCACACTATTGCTTTTACATGAAATTCAGAAGACTCCAAAGCTaGAGGAGCATCTTCTCGTGC | + |
Preference number: 5 (lower is better) Translates to: TSQTKGRHISHYCFYMKFRRLQS*RSIFSC Trigger: GCACGAGAAGATGCTCCTCAAGCTTTGGAGTCTTCT...GAATTTCATGTAAAAGCAATAGTGTGAGATGTGACGTCCTTTTGTTTGTGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS GCA 72 bp | TTGGGATCGTCACCTTGGAAACCAATGTCTGCCCACTaGTTGGAGATCCGGGCCGTCAACTTTTTCGTTGGC | + |
Preference number: 6 (lower is better) Translates to: LGSSPWKPMSAH*LEIRAVNFFVG Trigger: GCCAACGAAAAAGTTGACGGCCCGGATCTCCAAGCAGTGGGCAGACATTGGTTTCCAAGGTGACGATCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053902.4 ENSMUST00000139041.2 ENSMUST00000177594.8 |
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CDS CAA 72 bp | GGATCGTCACCTTGGAAACCAATGTCTGCCCACTGCTaGGAGATCCGGGCCGTCAACTTTTTCGTTGGCATC | + |
Preference number: 6 (lower is better) Translates to: GSSPWKPMSAHC*EIRAVNFFVGI Trigger: GATGCCAACGAAAAAGTTGACGGCCCGGATCTCCAAGCAGTGGGCAGACATTGGTTTCCAAGGTGACGATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053902.4 ENSMUST00000139041.2 ENSMUST00000177594.8 |
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CDS CAA 90 bp | TCTGTTTTGGGATCGTCACCTTGGAAACCAATGTCTGCCCACTGCTaGGAGATCCGGGCCGTCAACTTTTTCGTTGGCATCAGAAGACTC | + |
Preference number: 6 (lower is better) Translates to: SVLGSSPWKPMSAHC*EIRAVNFFVGIRRL Trigger: GAGTCTTCTGATGCCAACGAAAAAGTTGACGGCCCGGATCTCCAAGCAGTGGGCAGACATTGGTTTCCAAGGTGACGATCCCAAAACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053902.4 ENSMUST00000139041.2 ENSMUST00000177594.8 |
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CDS CAA 72 bp | GTCAACTTTTTCGTTGGCATCAGAAGACTCCAAAGCTaGAGGAGCATCTTCTCGTGCTGTGCATTGGCAGAG | + |
Preference number: 6 (lower is better) Translates to: VNFFVGIRRLQS*RSIFSCCALAE Trigger: CTCTGCCAATGCACAGCACGAGAAGATGCTCCTCAAGCTTTGGAGTCTTCTGATGCCAACGAAAAAGTTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053902.4 ENSMUST00000139041.2 ENSMUST00000177594.8 |
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CDS CAA 90 bp | ATTCATAGACAAGGTAACAGTAAAACTGGTGGAAGTGCTCCATCGTaGGTACCCCAGGGACAAAGTTGTAGAGGTGAAGCTTCAGGGCCT | + |
Preference number: 6 (lower is better) Translates to: IHRQGNSKTGGSAPS*VPQGQSCRGEASGP Trigger: AGGCCCTGAAGCTTCACCTCTACAACTTTGTCCCTGGGGTACCAACGATGGAGCACTTCCACCAGTTTTACTGTTACCTTGTCTATGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS TCA 72 bp | TTGTGTCCTTCTCGGAGCAGATGTTCTTTTCCTTCATaGTGTTCGCTATACACCTGTCCAGTTCACTCTGGG | + |
Preference number: 6 (lower is better) Translates to: LCPSRSRCSFPS*CSLYTCPVHSG Trigger: CCCAGAGTGAACTGGACAGGTGTATAGCGAACATCATGAAGGAAAAGAACATCTGCTCCGAGAAGGACACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053902.4 ENSMUST00000139041.2 ENSMUST00000177594.8 |
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CDS TCA 72 bp | CCAGTTATCTGCAGTAAGCACGTCCGCATGCAGATCTaGAAACTTGTGTCCTTCTCGGAGCAGATGTTCTTT | + |
Preference number: 6 (lower is better) Translates to: PVICSKHVRMQI*KLVSFSEQMFF Trigger: AAAGAACATCTGCTCCGAGAAGGACACAAGTTTTCAGATCTGCATGCGGACGTGCTTACTGCAGATAACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053902.4 ENSMUST00000139041.2 ENSMUST00000177594.8 |
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CDS TCA 72 bp | TCAACTTTTTCGTTGGCATCAGAAGACTCCAAAGCTTaGGGAGCATCTTCTCGTGCTGTGCATTGGCAGAGT | + |
Preference number: 6 (lower is better) Translates to: STFSLASEDSKA*GASSRAVHWQS Trigger: ACTCTGCCAATGCACAGCACGAGAAGATGCTCCTCAAGCTTTGGAGTCTTCTGATGCCAACGAAAAAGTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053902.4 ENSMUST00000139041.2 ENSMUST00000177594.8 |
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CDS GCA 72 bp | GTTTATAGCCAGTTATCTGCAGTAAGCACGTCCGCATaGAGATCTGAAAACTTGTGTCCTTCTCGGAGCAGA | + |
Preference number: 6 (lower is better) Translates to: VYSQLSAVSTSA*RSENLCPSRSR Trigger: TCTGCTCCGAGAAGGACACAAGTTTTCAGATCTGCATGCGGACGTGCTTACTGCAGATAACTGGCTATAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053902.4 ENSMUST00000139041.2 ENSMUST00000177594.8 |
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CDS CCA 72 bp | AAGGTAACAGTAAAACTGGTGGAAGTGCTCCATCGTTaGTACCCCAGGGACAAAGTTGTAGAGGTGAAGCTT | + |
Preference number: 6 (lower is better) Translates to: KVTVKLVEVLHR*YPRDKVVEVKL Trigger: AAGCTTCACCTCTACAACTTTGTCCCTGGGGTACCAACGATGGAGCACTTCCACCAGTTTTACTGTTACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |
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CDS CAA 72 bp | TCTGCAGTAAGCACGTCCGCATGCAGATCTGAAAACTaGTGTCCTTCTCGGAGCAGATGTTCTTTTCCTTCA | + |
Preference number: 6 (lower is better) Translates to: SAVSTSACRSEN*CPSRSRCSFPS Trigger: TGAAGGAAAAGAACATCTGCTCCGAGAAGGACACAAGTTTTCAGATCTGCATGCGGACGTGCTTACTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053902.4 ENSMUST00000139041.2 ENSMUST00000177594.8 |
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CDS CAA 72 bp | CTATACACCTGTCCAGTTCACTCTGGGCAACTCGTGTaGCATTCTGTAGGACCTTATTCTTGGAATATGTCA | + |
Preference number: 6 (lower is better) Translates to: LYTCPVHSGQLV*HSVGPYSWNMS Trigger: TGACATATTCCAAGAATAAGGTCCTACAGAATGCAACACGAGTTGCCCAGAGTGAACTGGACAGGTGTATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053902.4 ENSMUST00000139041.2 ENSMUST00000177594.8 |
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CDS TCA 72 bp | GCATTGCAATCCATCAAGAGTCCTTTGATCCGCTCGTaGAACTTCTCTCTGTACAAGTTGAAGTACATAATG | + |
Preference number: 6 (lower is better) Translates to: ALQSIKSPLIRS*NFSLYKLKYIM Trigger: CATTATGTACTTCAACTTGTACAGAGAGAAGTTTCACGAGCGGATCAAAGGACTCTTGATGGATTGCAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053902.4 ENSMUST00000177594.8 |