Pregenerated sensors for ELMOD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041986Ensembl transcript IDs: ENSMUST00000048409.14, ENSMUST00000166580.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGGGTTCAGCAAGAGTCAGATAGTGAGAAACCCTTTGCAGCCTTaGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACAC | + |
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Preference number: 1 (lower is better) Translates to: SGFSKSQIVRNPLQP*KDMASFLGAPSIIH Trigger: GTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTGACTCTTGCTGAACCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR CAA 90 bp | GTCTGGGTTCAGCAAGAGTCAGATAGTGAGAAACCCTTTGCAGCCTaGGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACA | + |
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Preference number: 2 (lower is better) Translates to: VWVQQESDSEKPFAA*ERYGFFSGGSEHHT Trigger: TGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTGACTCTTGCTGAACCCAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR CAA 90 bp | AGAACTAAGTCTGGGTTCAGCAAGAGTCAGATAGTGAGAAACCCTTaGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGC | + |
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Preference number: 2 (lower is better) Translates to: RTKSGFSKSQIVRNP*QPWKDMASFLGAPS Trigger: GCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTGACTCTTGCTGAACCCAGACTTAGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR TCA 90 bp | CAGATAGTGAGAAACCCTTTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGATGCTCCAGAAATGGTaGTTTTGGGGGAATCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: QIVRNPLQPWKDMASFLGMLQKW*FWGNLG Trigger: TCCAAGATTCCCCCAAAATCACCATTTCTGGAGCAT...CCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR TCA 90 bp | CAGATAGTGAGAAACCCTTTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGTATGCTTTACCCAAATaGGGTACAAGCAAGGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: QIVRNPLQPWKDMASFLGYALPK*GTSKGP Trigger: TGGACCCTTGCTTGTACCTCATTTGGGTAAAGCATA...CCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACACCTCATTACATTCTGGTaGAGTGCAGTTATATGTGCA | + |
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Preference number: 2 (lower is better) Translates to: LQPWKDMASFLGAPSIIHLITFW*SAVICA Trigger: TGCACATATAACTGCACTTCACCAGAATGTAATGAG...GTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCTGGGGGCTCCGAGCATCATACACATATTTAGACATCCAAGCCATGAAGCGGTTAACACTGCACAATaGCACAATGTGAGCAATCAC | + |
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Preference number: 2 (lower is better) Translates to: FLGAPSIIHIFRHPSHEAVNTAQ*HNVSNH Trigger: GTGATTGCTCACATTGTGGCATTGTGCAGTGTTAAC...CGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACACTTTTTCATACCTGGGTaGCAAGGACAGATGTTAACA | + |
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Preference number: 2 (lower is better) Translates to: LQPWKDMASFLGAPSIIHFFIPG*QGQMLT Trigger: TGTTAACATCTGTCCTTGGCACCCAGGTATGAAAAA...GTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGTTCAGCAAGAGTCAGATAGTGAGAAACCCTTTGCAGCCTTGGAAAGATATTATGCTTTACCCAAATaGGGTACAAGCAAGGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: WVQQESDSEKPFAALERYYALPK*GTSKGP Trigger: TGGACCCTTGCTTGTACCTCATTTGGGTAAAGCATA...ATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTGACTCTTGCTGAACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACACAAGTGCAGTTATATGTaGAGGAAGAGTTTGGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: LQPWKDMASFLGAPSIIHKCSYM*RKSLAY Trigger: ATAAGCCAAACTCTTCCTGCACATATAACTGCACTT...GTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR GCA 90 bp | CAGATAGTGAGAAACCCTTTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGTACATTCTGGTGAAGTaGAGTTATATGTGCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: QIVRNPLQPWKDMASFLGYILVK*SYMCRK Trigger: CTTCCTGCACATATAACTGCACTTCACCAGAATGTA...CCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCATACACATATTTAGACATCCAAGCCATGAAGCGATGGGAGAATAGTAGTATGCTCCAGAAATGGTaGTTTTGGGGGAATCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: ASYTYLDIQAMKRWENSSMLQKW*FWGNLG Trigger: TCCAAGATTCCCCCAAAATCACCATTTCTGGAGCAT...ACTACTATTCTCCCATCGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACACATATTTAGACTTTTTCATACCTGGGTaGCAAGGACAGATGTTAACA | + |
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Preference number: 2 (lower is better) Translates to: GKIWLLFWGLRASYTYLDFFIPG*QGQMLT Trigger: TGTTAACATCTGTCCTTGGCACCCAGGTATGAAAAA...GTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR TCA 90 bp | ACACAAGGATGGTTCCTATTTAAGCTAATTTCTTATAGCCTCATTACATTCTGGCACAATGCCACAATGTaGGCAATCACTGGAGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: TQGWFLFKLISYSLITFWHNATM*AITGGL Trigger: CAACCCTCCAGTGATTGCTCACATTGTGGCATTGTG...CCAGAATGTAATGAGGCTATAAGAAATTAGCTTAAATAGGAACCATCCTTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGTTCAGCAAGAGTCAGATAGTGAGAAACCCTTTGCAGCCTTGGAAAGATATAAGTGCAGTTATATGTaGAGGAAGAGTTTGGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: WVQQESDSEKPFAALERYKCSYM*RKSLAY Trigger: ATAAGCCAAACTCTTCCTGCACATATAACTGCACTT...ATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTGACTCTTGCTGAACCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACACATATTTAGACATTTTGGGGGAATCTTaGAATAATGACCAAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: GKIWLLFWGLRASYTYLDILGES*NNDQEM Trigger: CATCTCTTGGTCATTATTCCAAGATTCCCCCAAAAT...GTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR GCA 72 bp | ACCTGGGTGCCAAGGACAGATGTTAACACTGCACAATaGCACAATGTGAGCAATCACTGGAGGGTTGATGCT | + |
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Preference number: 3 (lower is better) Translates to: TWVPRTDVNTAQ*HNVSNHWRVDA Trigger: AGCATCAACCCTCCAGTGATTGCTCACATTGTGGCATTGTGCAGTGTTAACATCTGTCCTTGGCACCCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR CCA 72 bp | AGCAAGAGTCAGATAGTGAGAAACCCTTTGCAGCCTTaGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGC | + |
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Preference number: 3 (lower is better) Translates to: SKSQIVRNPLQP*KDMASFLGAPS Trigger: GCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTGACTCTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR CAA 90 bp | TTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACACATGTGCAGGAAGAGTTaGGCTTATCATGTGTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: LQPWKDMASFLGAPSIIHMCRKS*AYHVSV Trigger: TACAGACACATGATAAGCCAAACTCTTCCTGCACAT...GTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR TCA 72 bp | TGCACAATGCCACAATGTGAGCAATCACTGGAGGGTTaGTGCTCCAGAAATGGTGATTTTGGGGGAATCTTG | + |
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Preference number: 3 (lower is better) Translates to: CTMPQCEQSLEG*CSRNGDFGGIL Trigger: CAAGATTCCCCCAAAATCACCATTTCTGGAGCATCAACCCTCCAGTGATTGCTCACATTGTGGCATTGTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR TCA 72 bp | CAAGGACAGATGTTAACACTGCACAATGCCACAATGTaGGCAATCACTGGAGGGTTGATGCTCCAGAAATGG | + |
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Preference number: 3 (lower is better) Translates to: QGQMLTLHNATM*AITGGLMLQKW Trigger: CCATTTCTGGAGCATCAACCCTCCAGTGATTGCTCACATTGTGGCATTGTGCAGTGTTAACATCTGTCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR CCA 72 bp | GTTAACACTGCACAATGCCACAATGTGAGCAATCACTaGAGGGTTGATGCTCCAGAAATGGTGATTTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: VNTAQCHNVSNH*RVDAPEMVILG Trigger: CCCCAAAATCACCATTTCTGGAGCATCAACCCTCCAGTGATTGCTCACATTGTGGCATTGTGCAGTGTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGGGGCTCCGAGCATCATACACATATTTAGACATCCAAGCCATGAAGCGATGCCAGAAATGGTGATTTaGGGGGAATCTTGGAATAAT | + |
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Preference number: 3 (lower is better) Translates to: LGAPSIIHIFRHPSHEAMPEMVI*GESWNN Trigger: ATTATTCCAAGATTCCCCCAAAATCACCATTTCTGG...CATCGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGCTCGGAGCCCCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR CCA 72 bp | ACCCTTTGCAGCCTTGGAAAGATATGGCTTCTTTTCTaGGGGCTCCGAGCATCATACACATATTTAGACATC | + |
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Preference number: 3 (lower is better) Translates to: TLCSLGKIWLLF*GLRASYTYLDI Trigger: GATGTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAAAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR CAA 90 bp | GGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACACATATTTAGACATGTGCAGGAAGAGTTaGGCTTATCATGTGTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: GKIWLLFWGLRASYTYLDMCRKS*AYHVSV Trigger: TACAGACACATGATAAGCCAAACTCTTCCTGCACAT...GTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR GCA 72 bp | TTCCACCGATACAAGGATGCTAATTTCAGGAAATATTaGATGGTATCATTGCTTAGGTTCCTGTGTTCTAAC | + |
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Preference number: 3 (lower is better) Translates to: FHRYKDANFRKY*MVSLLRFLCSN Trigger: GTTAGAACACAGGAACCTAAGCAATGATACCATGCAATATTTCCTGAAATTAGCATCCTTGTATCGGTGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR-3UTR CAA 90 bp | ACACAAGGATGGTTCCTATTTAAGCTAATTTCTTATAGCCTCATTACATTCTGGCCAGAAATGGTGATTTaGGGGGAATCTTGGAATAAT | + |
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Preference number: 3 (lower is better) Translates to: TQGWFLFKLISYSLITFWPEMVI*GESWNN Trigger: ATTATTCCAAGATTCCCCCAAAATCACCATTTCTGG...CCAGAATGTAATGAGGCTATAAGAAATTAGCTTAAATAGGAACCATCCTTGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR TCA 72 bp | TTTAAGCTAATTTCTTATAGCCTCATTACATTCTGGTaGAGTGCAGTTATATGTGCAGGAAGAGTTTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: FKLISYSLITFW*SAVICAGRVWL Trigger: AAGCCAAACTCTTCCTGCACATATAACTGCACTTCACCAGAATGTAATGAGGCTATAAGAAATTAGCTTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR CCA 90 bp | TGGGTGCCAAGGACAGATGTTAACACTGCACAATGCCACAATGTGAGCAATCACTGCAGGAGGCAAGCCTaGAGAGAGATCCCCAACTGT | + |
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Preference number: 4 (lower is better) Translates to: WVPRTDVNTAQCHNVSNHCRRQA*REIPNC Trigger: ACAGTTGGGGATCTCTCTCCAGGCTTGCCTCCTGCA...GTGATTGCTCACATTGTGGCATTGTGCAGTGTTAACATCTGTCCTTGGCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR GCA 90 bp | TTTCTGGGGGCTCCGAGCATCATACACATATTTAGACATCCAAGCCATGAAGCGTCCGATGCAGCAAAATaGGGGCACAGCGCCATATCT | + |
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Preference number: 4 (lower is better) Translates to: FLGAPSIIHIFRHPSHEASDAAK*GHSAIS Trigger: AGATATGGCGCTGTGCCCGCATTTTGCTGCATCGGA...CGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| 3UTR CAA 72 bp | CAGCAAGAGTCAGATAGTGAGAAACCCTTTGCAGCCTaGGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: QQESDSEKPFAA*ERYGFFSGGSE Trigger: CTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTGACTCTTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR GCA 90 bp | CTGGGGGCTCCGAGCATCATACACATATTTAGACATCCAAGCCATGAAGCGATGAGAAGCATCTCTTCATaGTGGGGGTTGTCGGAATCA | + |
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Preference number: 4 (lower is better) Translates to: LGAPSIIHIFRHPSHEAMRSISS*WGLSES Trigger: TGATTCCGACAACCCCCAGCATGAAGAGATGCTTCT...CATCGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGCTCGGAGCCCCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR CCA 90 bp | GGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACACATATTTAGACACTCCAGTGGAGTGTTaGGCTTCAGGAGCTCCCATA | + |
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Preference number: 4 (lower is better) Translates to: GKIWLLFWGLRASYTYLDTPVEC*ASGAPI Trigger: TATGGGAGCTCCTGAAGCCCAACACTCCACTGGAGT...GTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR CCA 90 bp | TGGGTGCCAAGGACAGATGTTAACACTGCACAATGCCACAATGTGAGCAATCACGCACAGCGCCATATCTaGGTTCTGCAGCTGTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: WVPRTDVNTAQCHNVSNHAQRHI*VLQLFY Trigger: ATAAAACAGCTGCAGAACCCAGATATGGCGCTGTGC...GTGATTGCTCACATTGTGGCATTGTGCAGTGTTAACATCTGTCCTTGGCACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR TCA 90 bp | GCAAGGGTCCAGCTTGAGAGGCTAGCAGCAGTCTTCGTGAGACATTTTAATAAAAATGTTTGTTGGAAGTaGGACAGTGTCGGAGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: ARVQLERLAAVFVRHFNKNVCWK*DSVGAS Trigger: CGAAGCTCCGACACTGTCTCACTTCCAACAAACATT...TTTATTAAAATGTCTCACGAAGACTGCTGCTAGCCTCTCAAGCTGGACCCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR TCA 90 bp | CTGGGGGCTCCGAGCATCATACACATATTTAGACATCCAAGCCATGAAGCGATGTCTGCAGCTGTTTTATaGTCCTCTTGCGGAATTTCT | + |
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Preference number: 4 (lower is better) Translates to: LGAPSIIHIFRHPSHEAMSAAVL*SSCGIS Trigger: AGAAATTCCGCAAGAGGATCATAAAACAGCTGCAGA...CATCGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGCTCGGAGCCCCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR GCA 90 bp | TTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACACAATCATAGGGTTCTCTaGGCAGTTTTTCCACATCTG | + |
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Preference number: 4 (lower is better) Translates to: LQPWKDMASFLGAPSIIHNHRVL*AVFPHL Trigger: CAGATGTGGAAAAACTGCGCAGAGAACCCTATGATT...GTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR GCA 90 bp | CAGATAGTGAGAAACCCTTTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGAGAAGCATCTCTTCATaGTGGGGGTTGTCGGAATCA | + |
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Preference number: 4 (lower is better) Translates to: QIVRNPLQPWKDMASFLGRSISS*WGLSES Trigger: TGATTCCGACAACCCCCAGCATGAAGAGATGCTTCT...CCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR GCA 90 bp | TTTCTGGGGGCTCCGAGCATCATACACATATTTAGACATCCAAGCCATGAAGCGATTGATGCCCACAATTaGAAAGGAGTACCCAATGGC | + |
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Preference number: 4 (lower is better) Translates to: FLGAPSIIHIFRHPSHEAIDAHN*KGVPNG Trigger: GCCATTGGGTACTCCTTTGCAATTGTGGGCATCAAT...CGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR CCA 90 bp | TGGGTGCCAAGGACAGATGTTAACACTGCACAATGCCACAATGTGAGCAATCACAAATACAGGCACACCTaGATCAACATCCTCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: WVPRTDVNTAQCHNVSNHKYRHT*INILRK Trigger: CTTCCTGAGGATGTTGATCCAGGTGTGCCTGTATTT...GTGATTGCTCACATTGTGGCATTGTGCAGTGTTAACATCTGTCCTTGGCACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048409.14 |
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| CDS-3UTR CCA 90 bp | GCATCATACACATATTTAGACATCCAAGCCATGAAGCGATGGGAGAATAGTAGTTGCAGGAGGCAAGCCTaGAGAGAGATCCCCAACTGT | + |
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Preference number: 4 (lower is better) Translates to: ASYTYLDIQAMKRWENSSCRRQA*REIPNC Trigger: ACAGTTGGGGATCTCTCTCCAGGCTTGCCTCCTGCA...ACTACTATTCTCCCATCGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR GCA 90 bp | TTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACACGCATCACAAACTTCATaGAGCGCCACAAAAATTTAC | + |
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Preference number: 4 (lower is better) Translates to: LQPWKDMASFLGAPSIIHASQTS*SATKIY Trigger: GTAAATTTTTGTGGCGCTGCATGAAGTTTGTGATGC...GTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR CCA 90 bp | TTTCTGGGGGCTCCGAGCATCATACACATATTTAGACATCCAAGCCATGAAGCGAGAGATCCCCAACTGTaGATTGATGTCAGGGTTAAT | + |
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Preference number: 4 (lower is better) Translates to: FLGAPSIIHIFRHPSHEARDPQL*IDVRVN Trigger: ATTAACCCTGACATCAATCCACAGTTGGGGATCTCT...CGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR CCA 90 bp | TGGGTGCCAAGGACAGATGTTAACACTGCACAATGCCACAATGTGAGCAATCACAGAGATCCCCAACTGTaGATTGATGTCAGGGTTAAT | + |
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Preference number: 4 (lower is better) Translates to: WVPRTDVNTAQCHNVSNHRDPQL*IDVRVN Trigger: ATTAACCCTGACATCAATCCACAGTTGGGGATCTCT...GTGATTGCTCACATTGTGGCATTGTGCAGTGTTAACATCTGTCCTTGGCACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR CCA 90 bp | GCATCATACACATATTTAGACATCCAAGCCATGAAGCGATGGGAGAATAGTAGTACTCCAGTGGAGTGTTaGGCTTCAGGAGCTCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: ASYTYLDIQAMKRWENSSTPVEC*ASGAPI Trigger: TATGGGAGCTCCTGAAGCCCAACACTCCACTGGAGT...ACTACTATTCTCCCATCGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCATACCTGGGTGCCAAGGACAGATGTTAACACTGCACAATGCCACAATGGCACAGCGCCATATCTaGGTTCTGCAGCTGTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FFIPGCQGQMLTLHNATMAQRHI*VLQLFY Trigger: ATAAAACAGCTGCAGAACCCAGATATGGCGCTGTGC...CATTGTGGCATTGTGCAGTGTTAACATCTGTCCTTGGCACCCAGGTATGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTTCAGCAAGAGTCAGATAGTGAGAAACCCTTTGCAGCCTTGGAAAGATATTTTCCACATCTGCAATaGGGTTTCTGTAACCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: WVQQESDSEKPFAALERYFPHLQ*GFCNPR Trigger: TCGTGGGTTACAGAAACCTCATTGCAGATGTGGAAA...ATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTGACTCTTGCTGAACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR GCA 90 bp | CAGATAGTGAGAAACCCTTTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGAATCATAGGGTTCTCTaGGCAGTTTTTCCACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QIVRNPLQPWKDMASFLGNHRVL*AVFPHL Trigger: CAGATGTGGAAAAACTGCGCAGAGAACCCTATGATT...CCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR GCA 90 bp | CCTAAGCAGAGATCTAGGATGACAATGAGGCAGTGTTCTGGGGTATTCATTGAAGCCATATCTGGGTTCTaGAGCTGTTTTATGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PKQRSRMTMRQCSGVFIEAISGF*SCFMIL Trigger: GAGGATCATAAAACAGCTGCAGAACCCAGATATGGC...TTCAATGAATACCCCAGAACACTGCCTCATTGTCATCCTAGATCTCTGCTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGGGTCCAGCTTGAGAGGCTAGCAGCAGTCTTCGTGAGACATTTTAATAAAACTCCATTATGTCCATaGGGTCCTCTTCAATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ARVQLERLAAVFVRHFNKTPLCP*GPLQSK Trigger: TTTGGATTGAAGAGGACCCCATGGACATAATGGAGT...TTTATTAAAATGTCTCACGAAGACTGCTGCTAGCCTCTCAAGCTGGACCCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR TCA 90 bp | GCATCATACACATATTTAGACATCCAAGCCATGAAGCGATGGGAGAATAGTAGTAATGTTTGTTGGAAGTaGGACAGTGTCGGAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ASYTYLDIQAMKRWENSSNVCWK*DSVGAS Trigger: CGAAGCTCCGACACTGTCTCACTTCCAACAAACATT...ACTACTATTCTCCCATCGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR GCA 90 bp | CAGATAGTGAGAAACCCTTTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGGCATCACAAACTTCATaGAGCGCCACAAAAATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QIVRNPLQPWKDMASFLGASQTS*SATKIY Trigger: GTAAATTTTTGTGGCGCTGCATGAAGTTTGTGATGC...CCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR GCA 90 bp | GCAAGGGTCCAGCTTGAGAGGCTAGCAGCAGTCTTCGTGAGACATTTTAATAAACAGTTTTTCCACATCTaGAATGAGGTTTCTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: ARVQLERLAAVFVRHFNKQFFHI*NEVSVT Trigger: GGTTACAGAAACCTCATTGCAGATGTGGAAAAACTG...TTTATTAAAATGTCTCACGAAGACTGCTGCTAGCCTCTCAAGCTGGACCCTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTGCCAAGGACAGATGTTAACACTGCACAATGCCACAATGTGAGCAATCACCAAAGGAGTACCCAATaGCTTTATCCATCTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WVPRTDVNTAQCHNVSNHQRSTQ*LYPSFS Trigger: AGAAAAAGATGGATAAAGCCATTGGGTACTCCTTTG...GTGATTGCTCACATTGTGGCATTGTGCAGTGTTAACATCTGTCCTTGGCACCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGGGGGCTCCGAGCATCATACACATATTTAGACATCCAAGCCATGAAGCGCAAAGGAGTACCCAATaGCTTTATCCATCTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLGAPSIIHIFRHPSHEAQRSTQ*LYPSFS Trigger: AGAAAAAGATGGATAAAGCCATTGGGTACTCCTTTG...CGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTTCAGCAAGAGTCAGATAGTGAGAAACCCTTTGCAGCCTTGGAAAGATATACTCCATTATGTCCATaGGGTCCTCTTCAATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WVQQESDSEKPFAALERYTPLCP*GPLQSK Trigger: TTTGGATTGAAGAGGACCCCATGGACATAATGGAGT...ATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTGACTCTTGCTGAACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR GCA 90 bp | CCTAAGCAGAGATCTAGGATGACAATGAGGCAGTGTTCTGGGGTATTCATTGAAATGTCTGCAACAGCTTaGTTTTTGAATCTCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PKQRSRMTMRQCSGVFIEMSATA*FLNLSV Trigger: CACTGAGAGATTCAAAAAGCAAGCTGTTGCAGACAT...TTCAATGAATACCCCAGAACACTGCCTCATTGTCATCCTAGATCTCTGCTTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR GCA 90 bp | ACACAAGGATGGTTCCTATTTAAGCTAATTTCTTATAGCCTCATTACATTCTGGTCCGATGCAGCAAAATaGGGGCACAGCGCCATATCT | + |
|
Preference number: 4 (lower is better) Translates to: TQGWFLFKLISYSLITFWSDAAK*GHSAIS Trigger: AGATATGGCGCTGTGCCCGCATTTTGCTGCATCGGA...CCAGAATGTAATGAGGCTATAAGAAATTAGCTTAAATAGGAACCATCCTTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| 3UTR CAA 72 bp | AATCACTGGAGGGTTGATGCTCCAGAAATGGTGATTTaGGGGGAATCTTGGAATAATGACCAAGAGATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NHWRVDAPEMVI*GESWNNDQEMK Trigger: TTTCATCTCTTGGTCATTATTCCAAGATTCCCCCAAAATCACCATTTCTGGAGCATCAACCCTCCAGTGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR GCA 90 bp | GCATCATACACATATTTAGACATCCAAGCCATGAAGCGATGGGAGAATAGTAGTATGTCTGCAACAGCTTaGTTTTTGAATCTCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASYTYLDIQAMKRWENSSMSATA*FLNLSV Trigger: CACTGAGAGATTCAAAAAGCAAGCTGTTGCAGACAT...ACTACTATTCTCCCATCGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CCA 90 bp | GGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACACATATTTAGACAAATACAGGCACACCTaGATCAACATCTTAATAATG | + |
|
Preference number: 4 (lower is better) Translates to: GKIWLLFWGLRASYTYLDKYRHT*INILIM Trigger: CATTATTAAGATGTTGATCCAGGTGTGCCTGTATTT...GTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166580.2 |
||
| CDS-3UTR TCA 90 bp | ACACAAGGATGGTTCCTATTTAAGCTAATTTCTTATAGCCTCATTACATTCTGGTTTCCACATCTGCAATaGGGTTTCTGTAACCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: TQGWFLFKLISYSLITFWFPHLQ*GFCNPR Trigger: TCGTGGGTTACAGAAACCTCATTGCAGATGTGGAAA...CCAGAATGTAATGAGGCTATAAGAAATTAGCTTAAATAGGAACCATCCTTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR GCA 90 bp | ACACAAGGATGGTTCCTATTTAAGCTAATTTCTTATAGCCTCATTACATTCTGGATTGATGCCCACAATTaGAAAGGAGTACCCAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TQGWFLFKLISYSLITFWIDAHN*KGVPNG Trigger: GCCATTGGGTACTCCTTTGCAATTGTGGGCATCAAT...CCAGAATGTAATGAGGCTATAAGAAATTAGCTTAAATAGGAACCATCCTTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS GCA 90 bp | AAATCTGTTTTCGGATCATCGCCTTGGAAGCCGATCTCACACCACTaGTTCGAAACCCGAGACTCCAGTGGAGTGTTGGGCTTCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSVFGSSPWKPISHH*FETRDSSGVLGFRS Trigger: GCTCCTGAAGCCCAACACTCCACTGGAGTCTCGGGTTTCGAAGCAGTGGTGTGAGATCGGCTTCCAAGGCGATGATCCGAAAACAGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS GCA 90 bp | CCTTCCGATGCAGCAAAATGCGGGCACAGCGCCATATCTGGGTTCTaGAGCTGTTTTATGATCCTCTTGCGGAATTTCTCCCTCACGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PSDAAKCGHSAISGF*SCFMILLRNFSLTR Trigger: TCGCGTGAGGGAGAAATTCCGCAAGAGGATCATAAAACAGCTGCAGAACCCAGATATGGCGCTGTGCCCGCATTTTGCTGCATCGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS CCA 90 bp | CGATCTCACACCACTGCTTCGAAACCCGAGACTCCAGTGGAGTGTTaGGCTTCAGGAGCTCCCATAGCTTCAGAAGCATCTCTTCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSHTTASKPETPVEC*ASGAPIASEASLHA Trigger: AGCATGAAGAGATGCTTCTGAAGCTATGGGAGCTCCTGAAGCCCAACACTCCACTGGAGTCTCGGGTTTCGAAGCAGTGGTGTGAGATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS CCA 90 bp | CCCAGAAGACCCATTCCTCGGAAATCTGTTTTCGGATCATCGCCTTaGAAGCCGATCTCACACCACTGCTTCGAAACCCGAGACTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PRRPIPRKSVFGSSP*KPISHHCFETRDSS Trigger: ACTGGAGTCTCGGGTTTCGAAGCAGTGGTGTGAGATCGGCTTCCAAGGCGATGATCCGAAAACAGATTTCCGAGGAATGGGTCTTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS GCA 90 bp | GGGGTTGTCGGAATCATAGGGTTCTCTGCGCAGTTTTTCCACATCTaGAATGAGGTTTCTGTAACCCACGATTTGCAGGAGGCAAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVVGIIGFSAQFFHI*NEVSVTHDLQEASL Trigger: CAGGCTTGCCTCCTGCAAATCGTGGGTTACAGAAACCTCATTGCAGATGTGGAAAAACTGCGCAGAGAACCCTATGATTCCGACAACCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS TCA 90 bp | TGTCGGAATCATAGGGTTCTCTGCGCAGTTTTTCCACATCTGCAATaGGGTTTCTGTAACCCACGATTTGCAGGAGGCAAGCCTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CRNHRVLCAVFPHLQ*GFCNPRFAGGKPGE Trigger: CTCTCCAGGCTTGCCTCCTGCAAATCGTGGGTTACAGAAACCTCATTGCAGATGTGGAAAAACTGCGCAGAGAACCCTATGATTCCGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CAA 90 bp | CCTAAGCAGAGATCTAGGATGACAATGAGGCAGTGTTCTGGGGTATTCATTGAAGACTCCAGTGGAGTGTaGGGCTTCAGGAGCTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PKQRSRMTMRQCSGVFIEDSSGV*GFRSSH Trigger: ATGGGAGCTCCTGAAGCCCAACACTCCACTGGAGTC...TTCAATGAATACCCCAGAACACTGCCTCATTGTCATCCTAGATCTCTGCTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CAA 90 bp | GGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACACATATTTAGACGACTCCAGTGGAGTGTaGGGCTTCAGGAGCTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GKIWLLFWGLRASYTYLDDSSGV*GFRSSH Trigger: ATGGGAGCTCCTGAAGCCCAACACTCCACTGGAGTC...GTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CAA 90 bp | TTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACACGCCAGGTCGGTGATATaGATGCCCACAATTGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LQPWKDMASFLGAPSIIHARSVI*MPTIAK Trigger: CTTTGCAATTGTGGGCATCAATATCACCGACCTGGC...GTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS CCA 90 bp | TGCATTTTGGATGGACAGAGTCGGAGAGGACCTGCTGAGCCACGGTaGCATCCCGTTCTGCAAAATATTGCAAATTGTAAAGTCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CILDGQSRRGPAEPR*HPVLQNIANCKVPE Trigger: TTCTGGGACTTTACAATTTGCAATATTTTGCAGAACGGGATGCCACCGTGGCTCAGCAGGTCCTCTCCGACTCTGTCCATCCAAAATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CAA 90 bp | TGGGTTCAGCAAGAGTCAGATAGTGAGAAACCCTTTGCAGCCTTGGAAAGATATTCTGTAACCCACGATTaGCAGGAGGCAAGCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WVQQESDSEKPFAALERYSVTHD*QEASLE Trigger: CTCCAGGCTTGCCTCCTGCAAATCGTGGGTTACAGA...ATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTGACTCTTGCTGAACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS TCA 90 bp | CAGGTTTGGTGCCGTAGCAAATCCTTTGCAGTTCACACCTTCCGGTaGGTTTCCGCATCACAAACTTCATGCAGCGCCACAAAAATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: QVWCRSKSFAVHTFR*VSASQTSCSATKIY Trigger: GTAAATTTTTGTGGCGCTGCATGAAGTTTGTGATGCGGAAACTCACCGGAAGGTGTGAACTGCAAAGGATTTGCTACGGCACCAAACCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CAA 90 bp | CAGATAGTGAGAAACCCTTTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGGCCAGGTCGGTGATATaGATGCCCACAATTGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QIVRNPLQPWKDMASFLGARSVI*MPTIAK Trigger: CTTTGCAATTGTGGGCATCAATATCACCGACCTGGC...CCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGGCTCCGAGCATCATACACATATTTAGACATCCAAGCCATGAAGCGATGGCAACAGCTTGCTTTTaGAATCTCTCAGTGACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGAPSIIHIFRHPSHEAMATACF*NLSVTF Trigger: AAACGTCACTGAGAGATTCAAAAAGCAAGCTGTTGC...CATCGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGCTCGGAGCCCCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGGCTCCGAGCATCATACACATATTTAGACATCCAAGCCATGAAGCGATGGATGTCTGCAACAGCTaGCTTTTTGAATCTCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LGAPSIIHIFRHPSHEAMDVCNS*LFESLS Trigger: ACTGAGAGATTCAAAAAGCAAGCTGTTGCAGACATC...CATCGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGCTCGGAGCCCCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CAA 90 bp | TGGGTGCCAAGGACAGATGTTAACACTGCACAATGCCACAATGTGAGCAATCACTGTTTTATGATCCTCTaGCGGAATTTCTCCCTCACG | + |
|
Preference number: 5 (lower is better) Translates to: WVPRTDVNTAQCHNVSNHCFMIL*RNFSLT Trigger: CGTGAGGGAGAAATTCCGCAAGAGGATCATAAAACA...GTGATTGCTCACATTGTGGCATTGTGCAGTGTTAACATCTGTCCTTGGCACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTGGGGGCTCCGAGCATCATACACATATTTAGACATCCAAGCCATGAAGCGGCAACAGCTTGCTTTTaGAATCTCTCAGTGACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLGAPSIIHIFRHPSHEAATACF*NLSVTF Trigger: AAACGTCACTGAGAGATTCAAAAAGCAAGCTGTTGC...CGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CAA 90 bp | CAGATAGTGAGAAACCCTTTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGTGTTTTATGATCCTCTaGCGGAATTTCTCCCTCACG | + |
|
Preference number: 5 (lower is better) Translates to: QIVRNPLQPWKDMASFLGCFMIL*RNFSLT Trigger: CGTGAGGGAGAAATTCCGCAAGAGGATCATAAAACA...CCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS CCA 90 bp | GCTTGCTTTTTGAATCTCTCAGTGACGTTTCAATTTTCATGGTTCTaGAAGCTCCAGGTTTGGTGCCGTAGCAAATCCTTTGCAGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ACFLNLSVTFQFSWF*KLQVWCRSKSFAVH Trigger: GTGAACTGCAAAGGATTTGCTACGGCACCAAACCTGGAGCTTCCAGAACCATGAAAATTGAAACGTCACTGAGAGATTCAAAAAGCAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTGGGGGCTCCGAGCATCATACACATATTTAGACATCCAAGCCATGAAGCGATCCCCAACTGTGGATaGATGTCAGGGTTAATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLGAPSIIHIFRHPSHEAIPNCG*MSGLIF Trigger: AAAAATTAACCCTGACATCAATCCACAGTTGGGGAT...CGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CAA 90 bp | ACACAAGGATGGTTCCTATTTAAGCTAATTTCTTATAGCCTCATTACATTCTGGTCTGTAACCCACGATTaGCAGGAGGCAAGCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TQGWFLFKLISYSLITFWSVTHD*QEASLE Trigger: CTCCAGGCTTGCCTCCTGCAAATCGTGGGTTACAGA...CCAGAATGTAATGAGGCTATAAGAAATTAGCTTAAATAGGAACCATCCTTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CAA 90 bp | GGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACACATATTTAGACCCGTTCTGCAAAATATaGCAAATTGTAAAGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GKIWLLFWGLRASYTYLDPFCKI*QIVKSQ Trigger: CTGGGACTTTACAATTTGCAATATTTTGCAGAACGG...GTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CAA 90 bp | CAGATAGTGAGAAACCCTTTGCAGCCTTGGAAAGATATGGCTTCTTTTCTGGGGTCTATTTTGCTGAATTaGCTGCATTTTGGATGGACA | + |
|
Preference number: 5 (lower is better) Translates to: QIVRNPLQPWKDMASFLGSILLN*LHFGWT Trigger: TGTCCATCCAAAATGCAGCAAATTCAGCAAAATAGA...CCCCAGAAAAGAAGCCATATCTTTCCAAGGCTGCAAAGGGTTTCTCACTATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGGGTCCAGCTTGAGAGGCTAGCAGCAGTCTTCGTGAGACATTTTAATAAATCTATTTTGCTGAATTaGCTGCATTTTGGATGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ARVQLERLAAVFVRHFNKSILLN*LHFGWT Trigger: TGTCCATCCAAAATGCAGCAAATTCAGCAAAATAGA...TTTATTAAAATGTCTCACGAAGACTGCTGCTAGCCTCTCAAGCTGGACCCTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR CAA 90 bp | GGAAAGATATGGCTTCTTTTCTGGGGGCTCCGAGCATCATACACATATTTAGACCAAATAGCAGAATGTTaGTTGGAAGTGAGACAGTGT | + |
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Preference number: 5 (lower is better) Translates to: GKIWLLFWGLRASYTYLDQIAEC*LEVRQC Trigger: ACACTGTCTCACTTCCAACAAACATTCTGCTATTTG...GTCTAAATATGTGTATGATGCTCGGAGCCCCCAGAAAAGAAGCCATATCTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR CAA 90 bp | GCATCATACACATATTTAGACATCCAAGCCATGAAGCGATGGGAGAATAGTAGTCCGTTCTGCAAAATATaGCAAATTGTAAAGTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: ASYTYLDIQAMKRWENSSPFCKI*QIVKSQ Trigger: CTGGGACTTTACAATTTGCAATATTTTGCAGAACGG...ACTACTATTCTCCCATCGCTTCATGGCTTGGATGTCTAAATATGTGTATGATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR CAA 90 bp | ACACAAGGATGGTTCCTATTTAAGCTAATTTCTTATAGCCTCATTACATTCTGGGATGTCTGCAACAGCTaGCTTTTTGAATCTCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: TQGWFLFKLISYSLITFWDVCNS*LFESLS Trigger: ACTGAGAGATTCAAAAAGCAAGCTGTTGCAGACATC...CCAGAATGTAATGAGGCTATAAGAAATTAGCTTAAATAGGAACCATCCTTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS-3UTR CAA 90 bp | ACACAAGGATGGTTCCTATTTAAGCTAATTTCTTATAGCCTCATTACATTCTGGCAAATAGCAGAATGTTaGTTGGAAGTGAGACAGTGT | + |
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Preference number: 5 (lower is better) Translates to: TQGWFLFKLISYSLITFWQIAEC*LEVRQC Trigger: ACACTGTCTCACTTCCAACAAACATTCTGCTATTTG...CCAGAATGTAATGAGGCTATAAGAAATTAGCTTAAATAGGAACCATCCTTGTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS GCA 72 bp | TTCGGATCATCGCCTTGGAAGCCGATCTCACACCACTaGTTCGAAACCCGAGACTCCAGTGGAGTGTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: FGSSPWKPISHH*FETRDSSGVLG Trigger: GCCCAACACTCCACTGGAGTCTCGGGTTTCGAAGCAGTGGTGTGAGATCGGCTTCCAAGGCGATGATCCGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CAA 90 bp | TCCCAGAAGACCCATTCCTCGGAAATCTGTTTTCGGATCATCGCCTaGGAAGCCGATCTCACACCACTGCTTCGAAACCCGAGACTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SQKTHSSEICFRIIA*EADLTPLLRNPRLQ Trigger: CTGGAGTCTCGGGTTTCGAAGCAGTGGTGTGAGATCGGCTTCCAAGGCGATGATCCGAAAACAGATTTCCGAGGAATGGGTCTTCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CCA 72 bp | CCCATTCCTCGGAAATCTGTTTTCGGATCATCGCCTTaGAAGCCGATCTCACACCACTGCTTCGAAACCCGA | + |
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Preference number: 6 (lower is better) Translates to: PIPRKSVFGSSP*KPISHHCFETR Trigger: TCGGGTTTCGAAGCAGTGGTGTGAGATCGGCTTCCAAGGCGATGATCCGAAAACAGATTTCCGAGGAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CAA 72 bp | ACCCATTCCTCGGAAATCTGTTTTCGGATCATCGCCTaGGAAGCCGATCTCACACCACTGCTTCGAAACCCG | + |
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Preference number: 6 (lower is better) Translates to: THSSEICFRIIA*EADLTPLLRNP Trigger: CGGGTTTCGAAGCAGTGGTGTGAGATCGGCTTCCAAGGCGATGATCCGAAAACAGATTTCCGAGGAATGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS TCA 72 bp | TGCCGTAGCAAATCCTTTGCAGTTCACACCTTCCGGTaGGTTTCCGCATCACAAACTTCATGCAGCGCCACA | + |
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Preference number: 6 (lower is better) Translates to: CRSKSFAVHTFR*VSASQTSCSAT Trigger: TGTGGCGCTGCATGAAGTTTGTGATGCGGAAACTCACCGGAAGGTGTGAACTGCAAAGGATTTGCTACGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS GCA 72 bp | GCAGCAAAATGCGGGCACAGCGCCATATCTGGGTTCTaGAGCTGTTTTATGATCCTCTTGCGGAATTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: AAKCGHSAISGF*SCFMILLRNFS Trigger: GGAGAAATTCCGCAAGAGGATCATAAAACAGCTGCAGAACCCAGATATGGCGCTGTGCCCGCATTTTGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CCA 72 bp | TTCCGATGCAGCAAAATGCGGGCACAGCGCCATATCTaGGTTCTGCAGCTGTTTTATGATCCTCTTGCGGAA | + |
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Preference number: 6 (lower is better) Translates to: FRCSKMRAQRHI*VLQLFYDPLAE Trigger: TTCCGCAAGAGGATCATAAAACAGCTGCAGAACCCAGATATGGCGCTGTGCCCGCATTTTGCTGCATCGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CCA 72 bp | GATGGACAGAGTCGGAGAGGACCTGCTGAGCCACGGTaGCATCCCGTTCTGCAAAATATTGCAAATTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: DGQSRRGPAEPR*HPVLQNIANCK Trigger: TTTACAATTTGCAATATTTTGCAGAACGGGATGCCACCGTGGCTCAGCAGGTCCTCTCCGACTCTGTCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CAA 72 bp | CTGCTGAGCCACGGTGGCATCCCGTTCTGCAAAATATaGCAAATTGTAAAGTCCCAGAAGACCCATTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LLSHGGIPFCKI*QIVKSQKTHSS Trigger: CGAGGAATGGGTCTTCTGGGACTTTACAATTTGCAATATTTTGCAGAACGGGATGCCACCGTGGCTCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CAA 72 bp | CCGCTCACGAGCAGATTATATGCCAGGTCGGTGATATaGATGCCCACAATTGCAAAGGAGTACCCAATGGCT | + |
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Preference number: 6 (lower is better) Translates to: PLTSRLYARSVI*MPTIAKEYPMA Trigger: AGCCATTGGGTACTCCTTTGCAATTGTGGGCATCAATATCACCGACCTGGCATATAATCTGCTCGTGAGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CAA 90 bp | GGGCACAGCGCCATATCTGGGTTCTGCAGCTGTTTTATGATCCTCTaGCGGAATTTCTCCCTCACGCGATTAAACTCCATTATGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: GHSAISGFCSCFMIL*RNFSLTRLNSIMSM Trigger: CATGGACATAATGGAGTTTAATCGCGTGAGGGAGAAATTCCGCAAGAGGATCATAAAACAGCTGCAGAACCCAGATATGGCGCTGTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS TCA 72 bp | CATAGGGTTCTCTGCGCAGTTTTTCCACATCTGCAATaGGGTTTCTGTAACCCACGATTTGCAGGAGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: HRVLCAVFPHLQ*GFCNPRFAGGK Trigger: CTTGCCTCCTGCAAATCGTGGGTTACAGAAACCTCATTGCAGATGTGGAAAAACTGCGCAGAGAACCCTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CAA 90 bp | TTTCATGGTTCTGGAAGCTCCAGGTTTGGTGCCGTAGCAAATCCTTaGCAGTTCACACCTTCCGGTGAGTTTCCGCATCACAAACTTCAT | + |
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Preference number: 6 (lower is better) Translates to: FHGSGSSRFGAVANP*QFTPSGEFPHHKLH Trigger: ATGAAGTTTGTGATGCGGAAACTCACCGGAAGGTGTGAACTGCAAAGGATTTGCTACGGCACCAAACCTGGAGCTTCCAGAACCATGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CAA 90 bp | TTTAGAGCGCCGCTCACGAGCAGATTATATGCCAGGTCGGTGATATaGATGCCCACAATTGCAAAGGAGTACCCAATGGCTTTATCCATC | + |
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Preference number: 6 (lower is better) Translates to: FRAPLTSRLYARSVI*MPTIAKEYPMALSI Trigger: GATGGATAAAGCCATTGGGTACTCCTTTGCAATTGTGGGCATCAATATCACCGACCTGGCATATAATCTGCTCGTGAGCGGCGCTCTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS GCA 72 bp | TTTCAATTTTCATGGTTCTGGAAGCTCCAGGTTTGGTaGCGTAGCAAATCCTTTGCAGTTCACACCTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: FQFSWFWKLQVW*RSKSFAVHTFR Trigger: CCGGAAGGTGTGAACTGCAAAGGATTTGCTACGGCACCAAACCTGGAGCTTCCAGAACCATGAAAATTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS GCA 72 bp | GGAATCATAGGGTTCTCTGCGCAGTTTTTCCACATCTaGAATGAGGTTTCTGTAACCCACGATTTGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GIIGFSAQFFHI*NEVSVTHDLQE Trigger: CTCCTGCAAATCGTGGGTTACAGAAACCTCATTGCAGATGTGGAAAAACTGCGCAGAGAACCCTATGATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CAA 72 bp | CTTGTGAAACTCGTGCATCAAATAGCAGAATGTTTGTaGGAAGTGAGACAGTGTCGGAGCTTCGGGGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: LVKLVHQIAECL*EVRQCRSFGGN Trigger: ATTGCCCCCGAAGCTCCGACACTGTCTCACTTCCAACAAACATTCTGCTATTTGATGCACGAGTTTCACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CAA 72 bp | AAACTTGTGAAACTCGTGCATCAAATAGCAGAATGTTaGTTGGAAGTGAGACAGTGTCGGAGCTTCGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: KLVKLVHQIAEC*LEVRQCRSFGG Trigger: GCCCCCGAAGCTCCGACACTGTCTCACTTCCAACAAACATTCTGCTATTTGATGCACGAGTTTCACAAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CCA 72 bp | ACGTTTCAATTTTCATGGTTCTGGAAGCTCCAGGTTTaGTGCCGTAGCAAATCCTTTGCAGTTCACACCTTC | + |
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Preference number: 6 (lower is better) Translates to: TFQFSWFWKLQV*CRSKSFAVHTF Trigger: GAAGGTGTGAACTGCAAAGGATTTGCTACGGCACCAAACCTGGAGCTTCCAGAACCATGAAAATTGAAACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CAA 72 bp | GCCATATCTGGGTTCTGCAGCTGTTTTATGATCCTCTaGCGGAATTTCTCCCTCACGCGATTAAACTCCATT | + |
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Preference number: 6 (lower is better) Translates to: AISGFCSCFMIL*RNFSLTRLNSI Trigger: AATGGAGTTTAATCGCGTGAGGGAGAAATTCCGCAAGAGGATCATAAAACAGCTGCAGAACCCAGATATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CAA 90 bp | TTCAATCCAAAACTTGTGAAACTCGTGCATCAAATAGCAGAATGTTaGTTGGAAGTGAGACAGTGTCGGAGCTTCGGGGGCAATGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: FNPKLVKLVHQIAEC*LEVRQCRSFGGNVV Trigger: TACAACATTGCCCCCGAAGCTCCGACACTGTCTCACTTCCAACAAACATTCTGCTATTTGATGCACGAGTTTCACAAGTTTTGGATTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CCA 72 bp | TTGAATCTCTCAGTGACGTTTCAATTTTCATGGTTCTaGAAGCTCCAGGTTTGGTGCCGTAGCAAATCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LNLSVTFQFSWF*KLQVWCRSKSF Trigger: AAAGGATTTGCTACGGCACCAAACCTGGAGCTTCCAGAACCATGAAAATTGAAACGTCACTGAGAGATTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS CCA 72 bp | TGCTTTTTGAATCTCTCAGTGACGTTTCAATTTTCATaGTTCTGGAAGCTCCAGGTTTGGTGCCGTAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: CFLNLSVTFQFS*FWKLQVWCRSK Trigger: TTTGCTACGGCACCAAACCTGGAGCTTCCAGAACCATGAAAATTGAAACGTCACTGAGAGATTCAAAAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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| CDS GCA 72 bp | CATCAGGATGAACACTCACGGATGTCTGCAACAGCTTaGTTTTTGAATCTCTCAGTGACGTTTCAATTTTCA | + |
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Preference number: 6 (lower is better) Translates to: HQDEHSRMSATA*FLNLSVTFQFS Trigger: TGAAAATTGAAACGTCACTGAGAGATTCAAAAAGCAAGCTGTTGCAGACATCCGTGAGTGTTCATCCTGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048409.14 ENSMUST00000166580.2 |
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