Pregenerated sensors for ELL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027246Ensembl transcript IDs: ENSMUST00000028679.11, ENSMUST00000116432.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTaGAAATGTCACTTTTCAGGATCTAGAAATGACTTAGCTAAAGTA | + |
|
Preference number: 1 (lower is better) Translates to: TPLKLLICLIFSRLT*KCHFSGSRNDLAKV Trigger: TACTTTAGCTAAGTCATTTCTAGATCCTGAAAAGTGACATTTCCAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTGCAAGGCAAGTCTCCTGGCACAGCTaGGGAGATGATACCATGCCC | + |
|
Preference number: 2 (lower is better) Translates to: ISSMSSVIRSSHFIPARQVSWHS*GDDTMP Trigger: GGGCATGGTATCATCTCCTCAGCTGTGCCAGGAGAC...TTGCCTTGCAGGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTCAGCCATGTTACATAAAGGTACACTATAAGTTCAATGAGTTCTGTCATCAGGTCTCCTGGCACAGCTaGGGAGATGATACCATGCCC | + |
|
Preference number: 2 (lower is better) Translates to: FQPCYIKVHYKFNEFCHQVSWHS*GDDTMP Trigger: GGGCATGGTATCATCTCCTCAGCTGTGCCAGGAGAC...CTGATGACAGAACTCATTGAACTTATAGTGTACCTTTATGTAACATGGCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| 3UTR CAA 90 bp | AAATGTCACTTTTCAGGATCTAGAAATGACTTAGCTAAAGTAAAGTaGAAGAAGCCAAGCACCTCCTACTTTCCTAGTCTCCTGGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: KCHFSGSRNDLAKVK*KKPSTSYFPSLLAQ Trigger: CTGTGCCAGGAGACTAGGAAAGTAGGAGGTGCTTGGCTTCTTCAACTTTACTTTAGCTAAGTCATTTCTAGATCCTGAAAAGTGACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| 3UTR-3UTR CCA 90 bp | CACTATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTGCAAGTGCAAGAACCTAGGATaGCTCTCTACTTGGTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: HYKFNEFCHQKFSFYPCKCKNLG*LSTWSL Trigger: CAGTGACCAAGTAGAGAGCCATCCTAGGTTCTTGCA...CTTGCAGGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTATAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGGATGGCTCTCTACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAAAGGGAGCCCAGGCAGTaGAGACAGTTCGGCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PRMALYLVTVDVRDKIRKREPRQ*RQFGPD Trigger: ATCTGGGCCGAACTGTCTCCACTGCCTGGGCTCCCT...TTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTAGAGAGCCATCCTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR TCA 90 bp | CCTAGGATGGCTCTCTACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAAGGAGGATCCTGGGAGTaGCTGTTCATGGTGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PRMALYLVTVDVRDKIRKGGSWE*LFMVAC Trigger: GCAAGCCACCATGAACAGTCACTCCCAGGATCCTCC...TTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTAGAGAGCCATCCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGGATGGCTCTCTACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAATACCCTCGGTGGCCTTaGAAAGCGATCACTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PRMALYLVTVDVRDKIRKYPRWP*KAITGR Trigger: ACGGCCAGTGATCGCTTTCCAAGGCCACCGAGGGTA...TTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTAGAGAGCCATCCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTGCAAGGCAACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTGGGGAAAGCAGGGACTaGTCAGGCTCTCTGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLQGNSPQVAYLSNILKVGESRD*SGSLLG Trigger: TCCAAGCAGAGAGCCTGATCAGTCCCTGCTTTCCCC...AACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTTGCCTTGCAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR GCA 90 bp | TACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAAGCAGCTGTTGTGTTCGGAGCTGAGAGGCTCTaGTCAAGCCTGGAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLVTVDVRDKIRKAAVVFGAERL*SSLESP Trigger: TGGAGATTCCAGGCTTGAGCAGAGCCTCTCAGCTCC...GAACACAACAGCTGCTTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTGCAAGGCAACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTGGAGCTGAGAGGCTCTaGTCAAGCCTGGAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLQGNSPQVAYLSNILKVGAERL*SSLESP Trigger: TGGAGATTCCAGGCTTGAGCAGAGCCTCTCAGCTCC...AACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTTGCCTTGCAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCTCTCTACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAAGCAGCTAGTGACTGTTCATGGTaGCTTGCCAGTGGGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MALYLVTVDVRDKIRKAASDCSW*LASGSD Trigger: GTCTGACCCACTGGCAAGCCACCATGAACAGTCACT...AGCTGCTTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTAGAGAGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | TACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAAGCAGCTGTTGTGTTCGGGAGTGACTGTTCATaGTGGCTTGCCAGTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLVTVDVRDKIRKAAVVFGSDCS*WLASGS Trigger: TGACCCACTGGCAAGCCACCATGAACAGTCACTCCC...GAACACAACAGCTGCTTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR GCA 90 bp | CCTAGGATGGCTCTCTACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAACCTGTTGCTGCTCTGTaGTGTGGATGGCTCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: PRMALYLVTVDVRDKIRKPVAAL*CGWLCI Trigger: AATACAGAGCCATCCACAGCACAGAGCAGCAACAGG...TTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTAGAGAGCCATCCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR GCA 90 bp | ATGGCTCTCTACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAAGCAGCTCCTGTTGCTGCTCTGTaGTGTGGATGGCTCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: MALYLVTVDVRDKIRKAAPVAAL*CGWLCI Trigger: AATACAGAGCCATCCACAGCACAGAGCAGCAACAGG...AGCTGCTTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTAGAGAGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCTCTCTACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAAGCAGCTGATCTGCCTAAGCGTTaGTACACAAGGTCCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MALYLVTVDVRDKIRKAADLPKR*YTRSKP Trigger: TGGCTTGGACCTTGTGTACCAACGCTTAGGCAGATC...AGCTGCTTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTAGAGAGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGGATGGCTCTCTACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAAGATCTGCCTAAGCGTTaGTACACAAGGTCCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRMALYLVTVDVRDKIRKDLPKR*YTRSKP Trigger: TGGCTTGGACCTTGTGTACCAACGCTTAGGCAGATC...TTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTAGAGAGCCATCCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGGGGAGTGACTGTTCATaGTGGCTTGCCAGTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGNSPQVAYLSNILKVNLGSDCS*WLASGS Trigger: TGACCCACTGGCAAGCCACCATGAACAGTCACTCCC...CAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTTGCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | GCAACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGGAAAGTGCCATGGGCTCACTaGAGGATCCTGGGAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ATPLKLLICLIFSRLTWKVPWAH*RILGVT Trigger: AGTCACTCCCAGGATCCTCCAGTGAGCCCATGGCAC...TTTCCAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR TCA 90 bp | AACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGGAAATGGGAGGATCCTGGGAGTaGCTGTTCATGGTGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSPQVAYLSNILKVNLEMGGSWE*LFMVAC Trigger: GCAAGCCACCATGAACAGTCACTCCCAGGATCCTCC...CATTTCCAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR GCA 90 bp | GCAACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGGAAACTGTTCATGGTGGCTTaGCAGTGGGTCAGACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATPLKLLICLIFSRLTWKLFMVA*QWVRHL Trigger: GAGGTGTCTGACCCACTGGCAAGCCACCATGAACAG...TTTCCAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR GCA 90 bp | AGAAATGACTTAGCTAAAGTAAAGTTGAAGAAGCCAAGCACCTCCTACTTTCCTCTGTTCATGGTGGCTTaGCAGTGGGTCAGACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RNDLAKVKLKKPSTSYFPLFMVA*QWVRHL Trigger: GAGGTGTCTGACCCACTGGCAAGCCACCATGAACAG...AGGAAAGTAGGAGGTGCTTGGCTTCTTCAACTTTACTTTAGCTAAGTCATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGCTTAGGTACCCTCGGTaGCCTTGGAAAGCGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: QGNSPQVAYLSNILKVNLLRYPR*PWKAIT Trigger: AGTGATCGCTTTCCAAGGCCACCGAGGGTACCTAAG...CAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTTGCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | CCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGGAAATGTCACTTGGTGCCAGCTGGGGATaGCCTTCAGGTTCGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQVAYLSNILKVNLEMSLGASWG*PSGSSP Trigger: TGGAGACGAACCTGAAGGCCATCCCCAGCTGGCACC...AAGTGACATTTCCAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | TACACTATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTGCAGGTGCCAGCTGGGGATaGCCTTCAGGTTCGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YTISSMSSVIRSSHFIPAGASWG*PSGSSP Trigger: TGGAGACGAACCTGAAGGCCATCCCCAGCTGGCACC...TGCAGGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTATAGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGAAATGACTTAGCTAAAGTAAAGTTGAAGAAGCCAAGCACCTCCTACTTTGTGCCATGGGCTCACTaGAGGATCCTGGGAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SRNDLAKVKLKKPSTSYFVPWAH*RILGVT Trigger: AGTCACTCCCAGGATCCTCCAGTGAGCCCATGGCAC...AAAGTAGGAGGTGCTTGGCTTCTTCAACTTTACTTTAGCTAAGTCATTTCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | GCAACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGGAAATTGTCCAGGCGTTTCTaGCTAGCAGGGGAAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ATPLKLLICLIFSRLTWKLSRRF*LAGESR Trigger: CCTGCTTTCCCCTGCTAGCCAGAAACGCCTGGACAA...TTTCCAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTGCAAGGCAACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTGGCTCTGCTCAAGCCTaGAATCTCCATCTTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLQGNSPQVAYLSNILKVGSAQA*NLHLHL Trigger: GAGATGAAGATGGAGATTCCAGGCTTGAGCAGAGCC...AACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTTGCCTTGCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTACACTATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCCGTACCTGTTGCTGCTaGCACTCTTGCAATGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KVHYKFNEFCHQKFSFYPRTCCC*HSCNAR Trigger: GCGGGCATTGCAAGAGTGTCAGCAGCAACAGGTACG...GGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTATAGTGTACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR TCA 90 bp | TTTCAGCCATGTTACATAAAGGTACACTATAAGTTCAATGAGTTCTGTCATCAGCGTACCTGTTGCTGCTaGCACTCTTGCAATGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FQPCYIKVHYKFNEFCHQRTCCC*HSCNAR Trigger: GCGGGCATTGCAAGAGTGTCAGCAGCAACAGGTACG...CTGATGACAGAACTCATTGAACTTATAGTGTACCTTTATGTAACATGGCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAGCCATGTTACATAAAGGTACACTATAAGTTCAATGAGTTCTGTCATCAGTACCCTCGGTGGCCTTaGAAAGCGATCACTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FQPCYIKVHYKFNEFCHQYPRWP*KAITGR Trigger: ACGGCCAGTGATCGCTTTCCAAGGCCACCGAGGGTA...CTGATGACAGAACTCATTGAACTTATAGTGTACCTTTATGTAACATGGCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | AGAAATGACTTAGCTAAAGTAAAGTTGAAGAAGCCAAGCACCTCCTACTTTCCTAGTGACTGTTCATGGTaGCTTGCCAGTGGGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RNDLAKVKLKKPSTSYFPSDCSW*LASGSD Trigger: GTCTGACCCACTGGCAAGCCACCATGAACAGTCACT...AGGAAAGTAGGAGGTGCTTGGCTTCTTCAACTTTACTTTAGCTAAGTCATTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGGATGGCTCTCTACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAAATCAGGCTCTCTGCTTaGAAGATAAGTGTGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRMALYLVTVDVRDKIRKIRLSA*KISVVP Trigger: AGGAACCACACTTATCTTCCAAGCAGAGAGCCTGAT...TTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTAGAGAGCCATCCTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGGATGGCTCTCTACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAAGAGCCTCTTTTCCTCTaGTTCTTCAGTGGTTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRMALYLVTVDVRDKIRKEPLFL*FFSGYR Trigger: CCTATAACCACTGAAGAACCAGAGGAAAAGAGGCTC...TTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTAGAGAGCCATCCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR TCA 90 bp | AACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGGAAATGCTAGAGGCAGAGCTCTaGGCCTCTTTTCCTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NSPQVAYLSNILKVNLEMLEAEL*ASFPLV Trigger: AACCAGAGGAAAAGAGGCTCAGAGCTCTGCCTCTAG...CATTTCCAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTGCAAGGCAACTAGAGGCAGAGCTCTaGGCCTCTTTTCCTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISSMSSVIRSSHFIPARQLEAEL*ASFPLV Trigger: AACCAGAGGAAAAGAGGCTCAGAGCTCTGCCTCTAG...TTGCCTTGCAGGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR TCA 90 bp | CACTATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTGCAAGTCTGGAGTTCCTCGCTaGAGTCTCTTGATCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HYKFNEFCHQKFSFYPCKSGVPR*SLLISA Trigger: GGCAGAGATCAAGAGACTTCAGCGAGGAACTCCAGA...CTTGCAGGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTATAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR GCA 90 bp | CCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGGAAATGTCACTTTCGTCTCCAGTGTCCTaGCAGCTCTCAGACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQVAYLSNILKVNLEMSLSSPVS*QLSDSL Trigger: CAGAGAGTCTGAGAGCTGGCAGGACACTGGAGACGA...AAGTGACATTTCCAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTACACTATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTCGTCTCCAGTGTCCTaGCAGCTCTCAGACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVHYKFNEFCHQKFSFYPSSPVS*QLSDSL Trigger: CAGAGAGTCTGAGAGCTGGCAGGACACTGGAGACGA...GGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTATAGTGTACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR GCA 90 bp | GCAACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGGAAAAAGTCTCTTGATCTCTaGCCCCAGCTCTGTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: ATPLKLLICLIFSRLTWKKSLDL*PQLCEP Trigger: AGGTTCACAGAGCTGGGGGCAGAGATCAAGAGACTT...TTTCCAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | AAGGTACACTATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTTGTCCAGGCGTTTCTaGCTAGCAGGGGAAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KVHYKFNEFCHQKFSFYPLSRRF*LAGESR Trigger: CCTGCTTTCCCCTGCTAGCCAGAAACGCCTGGACAA...GGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTATAGTGTACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | GCAACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGGAAAGGCTCTGCTCAAGCCTaGAATCTCCATCTTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATPLKLLICLIFSRLTWKGSAQA*NLHLHL Trigger: GAGATGAAGATGGAGATTCCAGGCTTGAGCAGAGCC...TTTCCAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | AACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGGAAATGTGCTGCTCTGTGCTGTaGATGGCTCTGTATTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSPQVAYLSNILKVNLEMCCSVL*MALYCR Trigger: CCTGCAATACAGAGCCATCCACAGCACAGAGCAGCA...CATTTCCAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR GCA 90 bp | TACACTATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTGCACCTCATTTCCCATTGTaGCATGGGCTCACTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTISSMSSVIRSSHFIPAPHFPL*HGLTGG Trigger: TCCTCCAGTGAGCCCATGGCACAATGGGAAATGAGG...TGCAGGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTATAGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGAAATGACTTAGCTAAAGTAAAGTTGAAGAAGCCAAGCACCTCCTACTTTAAGTCTCTTGATCTCTaGCCCCAGCTCTGTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SRNDLAKVKLKKPSTSYFKSLDL*PQLCEP Trigger: AGGTTCACAGAGCTGGGGGCAGAGATCAAGAGACTT...AAAGTAGGAGGTGCTTGGCTTCTTCAACTTTACTTTAGCTAAGTCATTTCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | TACACTATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTGCACTTAGGTACCCTCGGTaGCCTTGGAAAGCGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: YTISSMSSVIRSSHFIPALRYPR*PWKAIT Trigger: AGTGATCGCTTTCCAAGGCCACCGAGGGTACCTAAG...TGCAGGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTATAGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | AACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGGAAATGCAGCACCTTGTGTTCTaGAGTTCCTCGCTGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSPQVAYLSNILKVNLEMQHLVF*SSSLKS Trigger: AGACTTCAGCGAGGAACTCCAGAACACAAGGTGCTG...CATTTCCAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTGCAAGGCAACCCTCTTGGCCACACTaGGATACTATGAAGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISSMSSVIRSSHFIPARQPSWPH*DTMKEK Trigger: TTTCTCCTTCATAGTATCCCAGTGTGGCCAAGAGGG...TTGCCTTGCAGGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAGCCATGTTACATAAAGGTACACTATAAGTTCAATGAGTTCTGTCATCAGCCATTAGTGCCCTCTTaGCCACACTGGGATACTATG | + |
|
Preference number: 4 (lower is better) Translates to: FQPCYIKVHYKFNEFCHQPLVPS*PHWDTM Trigger: CATAGTATCCCAGTGTGGCCAAGAGGGCACTAATGG...CTGATGACAGAACTCATTGAACTTATAGTGTACCTTTATGTAACATGGCTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGAAATGACTTAGCTAAAGTAAAGTTGAAGAAGCCAAGCACCTCCTACTTTAGCTCTCAGACTCTCTaGTACCTTCAGTCAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRNDLAKVKLKKPSTSYFSSQTL*YLQSGV Trigger: AACACCTGACTGAAGGTACCAGAGAGTCTGAGAGCT...AAAGTAGGAGGTGCTTGGCTTCTTCAACTTTACTTTAGCTAAGTCATTTCTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAGCCATGTTACATAAAGGTACACTATAAGTTCAATGAGTTCTGTCATCAGAGCTCTCAGACTCTCTaGTACCTTCAGTCAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FQPCYIKVHYKFNEFCHQSSQTL*YLQSGV Trigger: AACACCTGACTGAAGGTACCAGAGAGTCTGAGAGCT...CTGATGACAGAACTCATTGAACTTATAGTGTACCTTTATGTAACATGGCTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | TACACTATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTGCAATCAGGCTCTCTGCTTaGAAGATAAGTGTGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YTISSMSSVIRSSHFIPAIRLSA*KISVVP Trigger: AGGAACCACACTTATCTTCCAAGCAGAGAGCCTGAT...TGCAGGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTATAGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAGCCATGTTACATAAAGGTACACTATAAGTTCAATGAGTTCTGTCATCAGGAGCCTCTTTTCCTCTaGTTCTTCAGTGGTTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: FQPCYIKVHYKFNEFCHQEPLFL*FFSGYR Trigger: CCTATAACCACTGAAGAACCAGAGGAAAAGAGGCTC...CTGATGACAGAACTCATTGAACTTATAGTGTACCTTTATGTAACATGGCTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS CCA 90 bp | TGGCTTGCCAGTGGGTCAGACACCTCATCTGGTGCCAGCTGGGGATaGCCTTCAGGTTCGTCTCCAGTGTCCTGCCAGCTCTCAGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: WLASGSDTSSGASWG*PSGSSPVSCQLSDS Trigger: AGAGTCTGAGAGCTGGCAGGACACTGGAGACGAACCTGAAGGCCATCCCCAGCTGGCACCAGATGAGGTGTCTGACCCACTGGCAAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS CCA 90 bp | CATTGTGCCATGGGCTCACTGGAGGATCCTGGGAGTGACTGTTCATaGTGGCTTGCCAGTGGGTCAGACACCTCATCTGGTGCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HCAMGSLEDPGSDCS*WLASGSDTSSGASW Trigger: CCAGCTGGCACCAGATGAGGTGTCTGACCCACTGGCAAGCCACCATGAACAGTCACTCCCAGGATCCTCCAGTGAGCCCATGGCACAATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS TCA 90 bp | CCTCATTTCCCATTGTGCCATGGGCTCACTGGAGGATCCTGGGAGTaGCTGTTCATGGTGGCTTGCCAGTGGGTCAGACACCTCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHFPLCHGLTGGSWE*LFMVACQWVRHLIW Trigger: CCAGATGAGGTGTCTGACCCACTGGCAAGCCACCATGAACAGTCACTCCCAGGATCCTCCAGTGAGCCCATGGCACAATGGGAAATGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | ATGGCTCTCTACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAAGCAGCTTTGCTGCTGACACTCTaGCAATGCCCGCAGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: MALYLVTVDVRDKIRKAALLLTL*QCPQRR Trigger: GCGGCGCTGCGGGCATTGCAAGAGTGTCAGCAGCAA...AGCTGCTTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTAGAGAGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGCAACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGTTGCTGCTGACACTCTaGCAATGCCCGCAGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QGNSPQVAYLSNILKVNLLLLTL*QCPQRR Trigger: GCGGCGCTGCGGGCATTGCAAGAGTGTCAGCAGCAA...CAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTTGCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | CCTAGGATGGCTCTCTACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAAGTACCTCCTCAGGGCTaGGGGATTCAGAGGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PRMALYLVTVDVRDKIRKVPPQG*GIQRLM Trigger: CATCAGCCTCTGAATCCCCAAGCCCTGAGGAGGTAC...TTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTAGAGAGCCATCCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | CCTAGGATGGCTCTCTACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAAACTGTTCATGGTGGCTaGCCAGTGGGTCAGACACCT | + |
|
Preference number: 5 (lower is better) Translates to: PRMALYLVTVDVRDKIRKTVHGG*PVGQTP Trigger: AGGTGTCTGACCCACTGGCAAGCCACCATGAACAGT...TTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTAGAGAGCCATCCTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | TCTAGAAATGACTTAGCTAAAGTAAAGTTGAAGAAGCCAAGCACCTCCTACTTTGTACCCTCGGTGGCCTaGGAAAGCGATCACTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SRNDLAKVKLKKPSTSYFVPSVA*ESDHWP Trigger: CGGCCAGTGATCGCTTTCCAAGGCCACCGAGGGTAC...AAAGTAGGAGGTGCTTGGCTTCTTCAACTTTACTTTAGCTAAGTCATTTCTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | TACTTGGTCACTGTGGATGTAAGGGACAAAATCAGAAAAGCAGCTGTTGTGTTCACTGTTCATGGTGGCTaGCCAGTGGGTCAGACACCT | + |
|
Preference number: 5 (lower is better) Translates to: YLVTVDVRDKIRKAAVVFTVHGG*PVGQTP Trigger: AGGTGTCTGACCCACTGGCAAGCCACCATGAACAGT...GAACACAACAGCTGCTTTTCTGATTTTGTCCCTTACATCCACAGTGACCAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | CACTATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTGCAAGGTACCTCCTCAGGGCTaGGGGATTCAGAGGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: HYKFNEFCHQKFSFYPCKVPPQG*GIQRLM Trigger: CATCAGCCTCTGAATCCCCAAGCCCTGAGGAGGTAC...CTTGCAGGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTATAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | CACTATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTGCAAGCACTGGCCGTACCTGTaGCTGCTGACACTCTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HYKFNEFCHQKFSFYPCKHWPYL*LLTLLQ Trigger: TTGCAAGAGTGTCAGCAGCAACAGGTACGGCCAGTG...CTTGCAGGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTATAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | GCAACTCCCCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGGAAATTGTCTTCCAGCACCTaGTGTTCTGGAGTTCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: ATPLKLLICLIFSRLTWKLSSST*CSGVPR Trigger: GCGAGGAACTCCAGAACACAAGGTGCTGGAAGACAA...TTTCCAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGGGGAGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | CCTCAAGTTGCTTATTTGTCTAATATTCTCAAGGTTAACCTGGAAATGTCACTTCACTGGCCGTACCTGTaGCTGCTGACACTCTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PQVAYLSNILKVNLEMSLHWPYL*LLTLLQ Trigger: TTGCAAGAGTGTCAGCAGCAACAGGTACGGCCAGTG...AAGTGACATTTCCAGGTTAACCTTGAGAATATTAGACAAATAAGCAACTTGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | AGAAATGACTTAGCTAAAGTAAAGTTGAAGAAGCCAAGCACCTCCTACTTTCCTACCATTAGTGCCCTCTaGGCCACACTGGGATACTAT | + |
|
Preference number: 5 (lower is better) Translates to: RNDLAKVKLKKPSTSYFPTISAL*ATLGYY Trigger: ATAGTATCCCAGTGTGGCCAAGAGGGCACTAATGGT...AGGAAAGTAGGAGGTGCTTGGCTTCTTCAACTTTACTTTAGCTAAGTCATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | ATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTGCAAGGCAAGTTCCTCATTTCCCATaGTGCCATGGGCTCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ISSMSSVIRSSHFIPARQVPHFP*CHGLTG Trigger: TCCAGTGAGCCCATGGCACAATGGGAAATGAGGAAC...TTGCCTTGCAGGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | TACACTATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTGCAGTTCCTCATTTCCCATaGTGCCATGGGCTCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: YTISSMSSVIRSSHFIPAVPHFP*CHGLTG Trigger: TCCAGTGAGCCCATGGCACAATGGGAAATGAGGAAC...TGCAGGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTATAGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | TTTCAGCCATGTTACATAAAGGTACACTATAAGTTCAATGAGTTCTGTCATCAGTTGTCTTCCAGCACCTaGTGTTCTGGAGTTCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: FQPCYIKVHYKFNEFCHQLSSST*CSGVPR Trigger: GCGAGGAACTCCAGAACACAAGGTGCTGGAAGACAA...CTGATGACAGAACTCATTGAACTTATAGTGTACCTTTATGTAACATGGCTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | TTTCAGCCATGTTACATAAAGGTACACTATAAGTTCAATGAGTTCTGTCATCAGACCATTAGTGCCCTCTaGGCCACACTGGGATACTAT | + |
|
Preference number: 5 (lower is better) Translates to: FQPCYIKVHYKFNEFCHQTISAL*ATLGYY Trigger: ATAGTATCCCAGTGTGGCCAAGAGGGCACTAATGGT...CTGATGACAGAACTCATTGAACTTATAGTGTACCTTTATGTAACATGGCTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTACACTATAAGTTCAATGAGTTCTGTCATCAGAAGTTCTCATTTTATCCCTACTCCTGGACTATCTaGTCTTCCAGCACCTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KVHYKFNEFCHQKFSFYPYSWTI*SSSTLC Trigger: ACACAAGGTGCTGGAAGACAAGATAGTCCAGGAGTA...GGGATAAAATGAGAACTTCTGATGACAGAACTCATTGAACTTATAGTGTACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS TCA 72 bp | GCTGACACTCTTGCAATGCCCGCAGCGCCGCCTCGTTaGGCCTTAGCATCAGGAGGCTGGTCCGAGCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ADTLAMPAAPPR*ALASGGWSEQR Trigger: CCGCTGCTCGGACCAGCCTCCTGATGCTAAGGCTCAACGAGGCGGCGCTGCGGGCATTGCAAGAGTGTCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS CCA 72 bp | GACCATCCCGGGCCTGGAAACCTTAGGTACCCTCGGTaGCCTTGGAAAGCGATCACTGGCCGTACCTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: DHPGPGNLRYPR*PWKAITGRTCC Trigger: GCAACAGGTACGGCCAGTGATCGCTTTCCAAGGCCACCGAGGGTACCTAAGGTTTCCAGGCCCGGGATGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||
| CDS CAA 72 bp | CACTGGAGGATCCTGGGAGTGACTGTTCATGGTGGCTaGCCAGTGGGTCAGACACCTCATCTGGTGCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: HWRILGVTVHGG*PVGQTPHLVPA Trigger: AGCTGGCACCAGATGAGGTGTCTGACCCACTGGCAAGCCACCATGAACAGTCACTCCCAGGATCCTCCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028679.11 ENSMUST00000116432.2 |
||