Pregenerated sensors for ELL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001542Ensembl transcript IDs: ENSMUST00000001583.8
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCCAAGGAAAATTGATTTaGAGTATAGACACTGGATCC | + |
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Preference number: 2 (lower is better) Translates to: RPQCASRAGAVITGKQCSQGKLI*SIDTGS Trigger: GGATCCAGTGTCTATACTTCAAATCAATTTTCCTTG...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| 3UTR-3UTR CAA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCCTATTAACAAACAAGTaGGGGGTTGGGGGTGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: RPQCASRAGAVITGKQCSLLTNK*GVGGGW Trigger: CCACCCACCCCCAACCCCCAACTTGTTTGTTAATAG...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR CCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCGCAGCGGCGAGAGGGTaGGGATGGCAGCAGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSAAARG*GWQQLQ Trigger: CTGCAGCTGCTGCCATCCCCACCCTCTCGCCGCTGC...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR TCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCGACAGGCAGGTGGGTTaGAGGCAGCGGCGAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSDRQVG*RQRREG Trigger: ACCCTCTCGCCGCTGCCTTCAACCCACCTGCCTGTC...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR TCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCTCAACAGGCAGGTCTTaGGTCCCCAGGCCTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSSTGRS*VPRPSG Trigger: TCCAGAAGGCCTGGGGACTCAAGACCTGCCTGTTGA...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR CCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCTGTCTCACTGTAACCTaGCCAGTCTCGCTGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSCLTVT*PVSLEL Trigger: GAGCTCCAGCGAGACTGGCCAGGTTACAGTGAGACA...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR CCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCAGGCAGCGTCTTTGCTaGAACACAGGGGAGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSRQRLC*NTGETL Trigger: CAGAGTCTCCCCTGTGTTCCAGCAAAGACGCTGCCT...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR TCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCTCCCTGTATGGCCTCTaGGAGACACTGTTGCCACTA | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSSLYGL*ETLLPL Trigger: TAGTGGCAACAGTGTCTCTCAGAGGCCATACAGGGA...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR TCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCTCGTTTCTGAGGAGATaGGGCAGCGTCTTTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSSFLRR*GSVFAG Trigger: TCCAGCAAAGACGCTGCCTCATCTCCTCAGAAACGA...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR CCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCCTGAAGAAGGCTCCATaGAGGCTGTGCACCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSLKKAP*RLCTLL Trigger: AAGAAGGGTGCACAGCCTCCATGGAGCCTTCTTCAG...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR CCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCTTAGCAGAGCTGAGCTaGGGGGTAATGTTTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSLAELS*GVMFPD Trigger: GTCTGGAAACATTACCCCCCAGCTCAGCTCTGCTAA...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR TCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCTTGGAATTTACAGTCTaGGGAGGATTGGAGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSLEFTV*GGLETG Trigger: GCCTGTCTCCAATCCTCCTCAGACTGTAAATTCCAA...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR CCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCCATTGGGATTTGGACTaGCATTACTCAGCTTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSHWDLD*HYSAWQ Trigger: CTGCCAAGCTGAGTAATGCCAGTCCAAATCCCAATG...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR TCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCATTCTGGTACTCTTTTaGACCCGGAGAAAGGCGTTT | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSILVLF*TRRKAF Trigger: AAACGCCTTTCTCCGGGTTCAAAAGAGTACCAGAAT...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR TCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCTGGAGTCCTTGGAACTaGATTGAAGGTCTAAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSWSPWN*IEGLKG Trigger: TCCTTTTAGACCTTCAATTCAGTTCCAAGGACTCCA...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR GCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCTCTGAGAGACACTGTTaGCACTATGCATCTTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSSERHC*HYASFE Trigger: TTCGAAAGATGCATAGTGGCAACAGTGTCTCTCAGA...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR CCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCTTTAGTGCCAGTAAATaGATGACCCTGTCCCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSFSASK*MTLSLY Trigger: ATACAGGGACAGGGTCATCCATTTACTGGCACTAAA...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR CCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCTGGCATTACTCAGCTTaGCAGTTTCTTCTCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSWHYSA*QFLLSE Trigger: TTCAGAGAGAAGAAACTGCCAAGCTGAGTAATGCCA...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR TCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCCTGGTGCTAGCATTCTaGGATGGATTTAGTTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSLVLAF*DGFSFL Trigger: TAGAAAACTAAATCCATCTCAGAATGCTAGCACCAG...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR TCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCATCTCTTCCCACGTTTaGCAAGTAGAAGTTAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSISSHV*QVEVKV Trigger: AACTTTAACTTCTACTTGTCAAACGTGGGAAGAGAT...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR TCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCCATCATACTCAGCATTaGAGTCATCCTTGTAATTCT | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSHHTQH*SHPCNS Trigger: AGAATTACAAGGATGACTTCAATGCTGAGTATGATG...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR GCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCGAGGTATATTTTTCTTaGTGGTCCTCAAAGATGCTA | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSEVYFS*WSSKML Trigger: TAGCATCTTTGAGGACCAGCAAGAAAAATATACCTC...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR CCA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCGTATATTTTTCTTGCTaGTCCTCAAAGATGCTACCA | + |
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Preference number: 4 (lower is better) Translates to: RPQCASRAGAVITGKQCSVYFSC*SSKMLP Trigger: TGGTAGCATCTTTGAGGACCAGCAAGAAAAATATAC...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR CAA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCAGACAGGCAGGTGGGTaGAAGGCAGCGGCGAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: RPQCASRAGAVITGKQCSRQAGG*KAAARG Trigger: CCCTCTCGCCGCTGCCTTCAACCCACCTGCCTGTCT...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR CAA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCGTCAACAGGCAGGTCTaGAGTCCCCAGGCCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: RPQCASRAGAVITGKQCSVNRQV*SPQAFW Trigger: CCAGAAGGCCTGGGGACTCAAGACCTGCCTGTTGAC...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR CAA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCCTTCTTCCATGGGCTTaGGACACTTTAGCAGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: RPQCASRAGAVITGKQCSLLPWA*DTLAEL Trigger: CAGCTCTGCTAAAGTGTCCAAAGCCCATGGAAGAAG...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR CAA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCCTTGTAATTCTGGCGTaGCTCATAAGAGACAATAGC | + |
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Preference number: 5 (lower is better) Translates to: RPQCASRAGAVITGKQCSLVILA*LIRDNS Trigger: GCTATTGTCTCTTATGAGCAACGCCAGAATTACAAG...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR CAA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCAATTTTCATAAGCCCTaGGAGTCCTTGGAACTGAAT | + |
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Preference number: 5 (lower is better) Translates to: RPQCASRAGAVITGKQCSNFHKP*ESLELN Trigger: ATTCAGTTCCAAGGACTCCAAGGGCTTATGAAAATT...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS-3UTR CAA 90 bp | AGGCCACAGTGTGCTTCCCGGGCTGGGGCTGTTATCACTGGGAAGCAGTGTAGCTCTTTAACTCCTTCATaGGGATTTGGACTGGCATTA | + |
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Preference number: 5 (lower is better) Translates to: RPQCASRAGAVITGKQCSSLTPS*GFGLAL Trigger: TAATGCCAGTCCAAATCCCAATGAAGGAGTTAAAGA...GCTACACTGCTTCCCAGTGATAACAGCCCCAGCCCGGGAAGCACACTGTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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| CDS GCA 72 bp | CCAAAGGTCGTTTCTGAGGAGATGAGGCAGCGTCTTTaGTGGAACACAGGGGAGACTCTGACCGGCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: PKVVSEEMRQRL*WNTGETLTGWC Trigger: GCACCAGCCGGTCAGAGTCTCCCCTGTGTTCCAGCAAAGACGCTGCCTCATCTCCTCAGAAACGACCTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001583.8 |
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