Pregenerated sensors for ELK4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026436Ensembl transcript IDs: ENSMUST00000027696.10, ENSMUST00000086556.12, ENSMUST00000146432.2, ENSMUST00000147218.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCTCCAGACCCACCACAGGGGACCAATGGGCACCCAAGGGAACTaGCAGACCCTCCAACCCAGGCCTTCACAGGACCACCCTGAGACC | + |
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Preference number: 1 (lower is better) Translates to: SLQTHHRGPMGTQGN*QTLQPRPSQDHPET Trigger: GGTCTCAGGGTGGTCCTGTGAAGGCCTGGGTTGGAGGGTCTGCCAGTTCCCTTGGGTGCCCATTGGTCCCCTGTGGTGGGTCTGGAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR CCA 90 bp | TCTGAGCCACGGTGCACAGCCTCCAGACCCACCACAGGGGACCAATaGGCACCCAAGGGAACTGGCAGACCCTCCAACCCAGGCCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: SEPRCTASRPTTGDQ*APKGTGRPSNPGLH Trigger: GTGAAGGCCTGGGTTGGAGGGTCTGCCAGTTCCCTTGGGTGCCCATTGGTCCCCTGTGGTGGGTCTGGAGGCTGTGCACCGTGGCTCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR CCA 90 bp | GGCACAGAGATGTGCTCGGGTAAGTGCAAACAAGATGCCTTTCTGTaGAACTGTCATGTCAGAGCTCAGGGCACACCAGAGCCCCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: GTEMCSGKCKQDAFL*NCHVRAQGTPEPQH Trigger: ATGCTGGGGCTCTGGTGTGCCCTGAGCTCTGACATGACAGTTCCACAGAAAGGCATCTTGTTTGCACTTACCCGAGCACATCTCTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR TCA 90 bp | GGAGCAGAATTAGAACTACAATGCCTCAGAAGGGGTCTCAAACTCTaGCAGGCTGCTCCTCCCTTGCCTCAGGCTACTGATGCCCAACAC | + |
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Preference number: 1 (lower is better) Translates to: GAELELQCLRRGLKL*QAAPPLPQATDAQH Trigger: GTGTTGGGCATCAGTAGCCTGAGGCAAGGGAGGAGCAGCCTGTCAGAGTTTGAGACCCCTTCTGAGGCATTGTAGTTCTAATTCTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR GCA 90 bp | TCATCCACCCAAACTCATACACAGGAACCCGCTCCCCTCTTCCTGTaGAGACATCGGTGTACAGACACTCAATCACTCCATGGCAGACAC | + |
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Preference number: 1 (lower is better) Translates to: SSTQTHTQEPAPLFL*RHRCTDTQSLHGRH Trigger: GTGTCTGCCATGGAGTGATTGAGTGTCTGTACACCGATGTCTGCACAGGAAGAGGGGAGCGGGTTCCTGTGTATGAGTTTGGGTGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR CCA 90 bp | CTTGGACTCCAATTAAGGCATTTTCTGTACAGAGTCCTCAAGGCCTaGCGACAGGCAGTGGGAAAATCACGAGCACTGCAGACGAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: LGLQLRHFLYRVLKA*RQAVGKSRALQTSP Trigger: AGGGCTCGTCTGCAGTGCTCGTGATTTTCCCACTGCCTGTCGCCAGGCCTTGAGGACTCTGTACAGAAAATGCCTTAATTGGAGTCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086556.12 ENSMUST00000147218.2 |
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| 3UTR TCA 90 bp | AACACTGCTTGTCCTAGCAAGGTGACTGGTGATGCACACCAGGGATaGGCTGAAGGGACAGCGTCTCTCCCTGAGTATCTGTTGATGCTA | + |
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Preference number: 1 (lower is better) Translates to: NTACPSKVTGDAHQG*AEGTASLPEYLLML Trigger: TAGCATCAACAGATACTCAGGGAGAGACGCTGTCCCTTCAGCTCATCCCTGGTGTGCATCACCAGTCACCTTGCTAGGACAAGCAGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR TCA 90 bp | CATACTTTCTCCCCCTGGCCAAAGGGTCCTAACATCCAAGGCCAGTaGCTTTGTTCTGTGACTCTCTTGAGAAACACAGCTGCTGAACCC | + |
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Preference number: 1 (lower is better) Translates to: HTFSPWPKGPNIQGQ*LCSVTLLRNTAAEP Trigger: GGGTTCAGCAGCTGTGTTTCTCAAGAGAGTCACAGAACAAAGTCACTGGCCTTGGATGTTAGGACCCTTTGGCCAGGGGGAGAAAGTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR TCA 90 bp | CCTCAAAGTGCTCATGCGTCCTTTGCCCCATCACCCTTAACTTCATaGCATTTGTCACCCAAAGGCAGAATTCCAGACTCTGCCCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: PQSAHASFAPSPLTS*HLSPKGRIPDSALA Trigger: AGCCAGGGCAGAGTCTGGAATTCTGCCTTTGGGTGACAAATGTCATGAAGTTAAGGGTGATGGGGCAAAGGACGCATGAGCACTTTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR CCA 90 bp | TTGTGTCTTTCTGAGACAGTCTCACTATATATATATAGCCCAGGCTaGCCCTCCATCCTTGGCGTTCTCCTCCCACCTCAGCTTCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: LCLSETVSLYIYSPG*PSILGVLLPPQLPK Trigger: CTTGGGAAGCTGAGGTGGGAGGAGAACGCCAAGGATGGAGGGCCAGCCTGGGCTATATATATATAGTGAGACTGTCTCAGAAAGACACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR GCA 90 bp | GAACAGCAGTGCATCAGAAAGCCCTCAAAGTGCTCATGCGTCCTTTaGCCCATCACCCTTAACTTCATGACATTTGTCACCCAAAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: EQQCIRKPSKCSCVL*PITLNFMTFVTQRQ Trigger: CTGCCTTTGGGTGACAAATGTCATGAAGTTAAGGGTGATGGGGCAAAGGACGCATGAGCACTTTGAGGGCTTTCTGATGCACTGCTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR TCA 90 bp | TTGCCACATCTGGAAATGACACCCAGAGGACTGCCATCTTTTCTTTaGACAGCAGTGCATCAGAAAGCCCTCAAAGTGCTCATGCGTCCT | + |
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Preference number: 1 (lower is better) Translates to: LPHLEMTPRGLPSFL*TAVHQKALKVLMRP Trigger: AGGACGCATGAGCACTTTGAGGGCTTTCTGATGCACTGCTGTTCAAAGAAAAGATGGCAGTCCTCTGGGTGTCATTTCCAGATGTGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR GCA 90 bp | GTGACAGGTTTAGACATGATCATAGGTATGGATGGCACAGAGATGTaGTCGGGTAAGTGCAAACAAGATGCCTTTCTGTGGAACTGTCAT | + |
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Preference number: 1 (lower is better) Translates to: VTGLDMIIGMDGTEM*SGKCKQDAFLWNCH Trigger: ATGACAGTTCCACAGAAAGGCATCTTGTTTGCACTTACCCGAGCACATCTCTGTGCCATCCATACCTATGATCATGTCTAAACCTGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR GCA 90 bp | CTTAACTTCATGACATTTGTCACCCAAAGGCAGAATTCCAGACTCTaGCCTGGCTTCACCAGCCTTAAACCAACATCTCTTTGTCTCTAC | + |
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Preference number: 1 (lower is better) Translates to: LNFMTFVTQRQNSRL*PGFTSLKPTSLCLY Trigger: GTAGAGACAAAGAGATGTTGGTTTAAGGCTGGTGAAGCCAGGGCAGAGTCTGGAATTCTGCCTTTGGGTGACAAATGTCATGAAGTTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR CCA 90 bp | AGAACCACACCACTCAAAGCACACACCAGAGATCTGTGCTCACAGTaGGATCTCCTATCCTCACAGAATGTTCCAAAACCCACATTAAAA | + |
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Preference number: 1 (lower is better) Translates to: RTTPLKAHTRDLCSQ*DLLSSQNVPKPTLK Trigger: TTTTAATGTGGGTTTTGGAACATTCTGTGAGGATAGGAGATCCCACTGTGAGCACAGATCTCTGGTGTGTGCTTTGAGTGGTGTGGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR GCA 90 bp | TTCTTTAATGTTGTTTACCTTTTAAATCATGTTCGCGCCTTACAGTaGTTCAATTGCCAGGTTCGCTGTGACTCAACCTCCTTTTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: FFNVVYLLNHVRALQ*FNCQVRCDSTSFLK Trigger: TTTTAAAAAGGAGGTTGAGTCACAGCGAACCTGGCAATTGAAGCACTGTAAGGCGCGAACATGATTTAAAAGGTAAACAACATTAAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGAGTAAACCCGCCAGAGTGCGTTCTCAGAGCCAGCTTCCCACATACAGGTTGCCAGGTTCGCTGTaGCTCAACCTCCTTTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: TWSKPARVRSQSQLPTYRLPGSL*LNLLFK Trigger: TTTAAAAAGGAGGTTGAGTCACAGCGAACCTGGCAA...CCTGTATGTGGGAAGCTGGCTCTGAGAACGCACTCTGGCGGGTTTACTCCAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR CAA 90 bp | CTTGCCACATCTGGAAATGACACCCAGAGGACTGCCATCTTTTCTTaGAACAGCAGTGCATCAGAAAGCCCTCAAAGTGCTCATGCGTCC | + |
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Preference number: 2 (lower is better) Translates to: LATSGNDTQRTAIFS*NSSASESPQSAHAS Trigger: GGACGCATGAGCACTTTGAGGGCTTTCTGATGCACTGCTGTTCAAAGAAAAGATGGCAGTCCTCTGGGTGTCATTTCCAGATGTGGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTGCGTTCTCAGAGCCAGCTTCCCACATACAGGCAAATCCCTCTGTCAGTTCTCACCCTTAACTTCATaGCATTTGTCACCCAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: ECVLRASFPHTGKSLCQFSPLTS*HLSPKG Trigger: GCCTTTGGGTGACAAATGTCATGAAGTTAAGGGTGA...GAACTGACAGAGGGATTTGCCTGTATGTGGGAAGCTGGCTCTGAGAACGCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR-3UTR CCA 90 bp | CCACAAATTCATTCCAAGGAAGGTCTATCCAACCCCACAAGGCCTCATGGTTTCTGGGGGCCTTCTAGCTaGGAAATATCCCACCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: PQIHSKEGLSNPTRPHGFWGPSS*EISHLL Trigger: TAGGAGGTGGGATATTTCCCAGCTAGAAGGCCCCCA...GAAACCATGAGGCCTTGTGGGGTTGGATAGACCTTCCTTGGAATGAATTTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTCTTAAGATAGCCATAAATGAACCAGTAACAGGTCTCCAGCCACCCCTCCATACTTTCTCCCCCTaGCCAAAGGGTCCTAACATC | + |
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Preference number: 2 (lower is better) Translates to: RALKIAINEPVTGLQPPLHTFSP*PKGPNI Trigger: GATGTTAGGACCCTTTGGCCAGGGGGAGAAAGTATG...GAGGGGTGGCTGGAGACCTGTTACTGGTTCATTTATGGCTATCTTAAGAGCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR-3UTR CCA 90 bp | GATCTCCTATCCTCACAGAATGTTCCAAAACCCACATTAAAACTGAGCTTTCAAATATATAGCCCAGGCTaGCCCTCCATCCTTGGCGTT | + |
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Preference number: 2 (lower is better) Translates to: DLLSSQNVPKPTLKLSFQIYSPG*PSILGV Trigger: AACGCCAAGGATGGAGGGCCAGCCTGGGCTATATAT...TTGAAAGCTCAGTTTTAATGTGGGTTTTGGAACATTCTGTGAGGATAGGAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR-3UTR CCA 90 bp | AAATTCATTCCAAGGAAGGTCTATCCAACCCCACAAGGCCTCATGGTTTCTTACCAAGATGCCTTTCTGTaGAACTGTCATGTCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: KFIPRKVYPTPQGLMVSYQDAFL*NCHVRA Trigger: AGCTCTGACATGACAGTTCCACAGAAAGGCATCTTG...GTAAGAAACCATGAGGCCTTGTGGGGTTGGATAGACCTTCCTTGGAATGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR CAA 90 bp | AAACTACAACTCTACTCTCCGACAAATCACCATTTGCATGTTGTGTaGCATGGTTACAGAACCACACCACTCAAAGCACACACCAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: KLQLYSPTNHHLHVV*HGYRTTPLKAHTRD Trigger: ATCTCTGGTGTGTGCTTTGAGTGGTGTGGTTCTGTAACCATGCAACACAACATGCAAATGGTGATTTGTCGGAGAGTAGAGTTGTAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR-3UTR CCA 90 bp | TTTAACTTTCAAACTACAACTCTACTCTCCGACAAATCACCATTTGCATGTTGTGATCATAGGTATGGATaGCACAGAGATGTGCTCGGG | + |
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Preference number: 2 (lower is better) Translates to: FNFQTTTLLSDKSPFACCDHRYG*HRDVLG Trigger: CCCGAGCACATCTCTGTGCCATCCATACCTATGATC...ACAACATGCAAATGGTGATTTGTCGGAGAGTAGAGTTGTAGTTTGAAAGTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR CAA 90 bp | TTTTTAACTTTCAAACTACAACTCTACTCTCCGACAAATCACCATTaGCATGTTGTGTTGCATGGTTACAGAACCACACCACTCAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: FLTFKLQLYSPTNHH*HVVLHGYRTTPLKA Trigger: TGCTTTGAGTGGTGTGGTTCTGTAACCATGCAACACAACATGCAAATGGTGATTTGTCGGAGAGTAGAGTTGTAGTTTGAAAGTTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR CAA 90 bp | AATATCCCACCTCCTATCTCTGGGTATTTAACTGAACCTTTTTGGTaGCCTGTTTTTAACTTTCAAACTACAACTCTACTCTCCGACAAA | + |
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Preference number: 2 (lower is better) Translates to: NIPPPISGYLTEPFW*PVFNFQTTTLLSDK Trigger: TTTGTCGGAGAGTAGAGTTGTAGTTTGAAAGTTAAAAACAGGCAACCAAAAAGGTTCAGTTAAATACCCAGAGATAGGAGGTGGGATATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR CCA 72 bp | ACCCACCACAGGGGACCAATGGGCACCCAAGGGAACTaGCAGACCCTCCAACCCAGGCCTTCACAGGACCAC | + |
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Preference number: 3 (lower is better) Translates to: THHRGPMGTQGN*QTLQPRPSQDH Trigger: GTGGTCCTGTGAAGGCCTGGGTTGGAGGGTCTGCCAGTTCCCTTGGGTGCCCATTGGTCCCCTGTGGTGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR GCA 72 bp | GAAGGGGTCTCAAACTCTGACAGGCTGCTCCTCCCTTaGCTCAGGCTACTGATGCCCAACACTGCTTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: EGVSNSDRLLLP*LRLLMPNTACP Trigger: AGGACAAGCAGTGTTGGGCATCAGTAGCCTGAGGCAAGGGAGGAGCAGCCTGTCAGAGTTTGAGACCCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR-3UTR CAA 90 bp | GAACTGTCATGTCAGAGCTCAGGGCACACCAGAGCCCCAGCATGGTCAATCCGCCCAAGGCCAGTGACTTaGTTCTGTGACTCTCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: ELSCQSSGHTRAPAWSIRPRPVT*FCDSLE Trigger: CTCAAGAGAGTCACAGAACAAAGTCACTGGCCTTGG...GCGGATTGACCATGCTGGGGCTCTGGTGTGCCCTGAGCTCTGACATGACAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR GCA 72 bp | CTCGACAGCTCTGGACTTGGAGTAAACCCGCCAGAGTaGGTTCTCAGAGCCAGCTTCCCACATACAGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: LDSSGLGVNPPE*VLRASFPHTGK Trigger: TTTGCCTGTATGTGGGAAGCTGGCTCTGAGAACGCACTCTGGCGGGTTTACTCCAAGTCCAGAGCTGTCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR CCA 72 bp | TTCTGTACAGAGTCCTCAAGGCCTGGCGACAGGCAGTaGGAAAATCACGAGCACTGCAGACGAGCCCTCATT | + |
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Preference number: 3 (lower is better) Translates to: FCTESSRPGDRQ*ENHEHCRRALI Trigger: AATGAGGGCTCGTCTGCAGTGCTCGTGATTTTCCCACTGCCTGTCGCCAGGCCTTGAGGACTCTGTACAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086556.12 ENSMUST00000147218.2 |
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| 3UTR TCA 72 bp | GGGCTACTCGGGGCAGTCCCTTGCCACATCTGGAAATaGCACCCAGAGGACTGCCATCTTTTCTTTGAACAG | + |
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Preference number: 3 (lower is better) Translates to: GLLGAVPCHIWK*HPEDCHLFFEQ Trigger: CTGTTCAAAGAAAAGATGGCAGTCCTCTGGGTGTCATTTCCAGATGTGGCAAGGGACTGCCCCGAGTAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR TCA 72 bp | TCCCCCTGGCCAAAGGGTCCTAACATCCAAGGCCAGTaGCTTTGTTCTGTGACTCTCTTGAGAAACACAGCT | + |
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Preference number: 3 (lower is better) Translates to: SPWPKGPNIQGQ*LCSVTLLRNTA Trigger: AGCTGTGTTTCTCAAGAGAGTCACAGAACAAAGTCACTGGCCTTGGATGTTAGGACCCTTTGGCCAGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR GCA 72 bp | CTAACGACCTCAGTGGTGACACTGAGTAACAGGAGATaGAGTTCAATACAACACACAAGGAGGGCGCACACC | + |
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Preference number: 3 (lower is better) Translates to: LTTSVVTLSNRR*SSIQHTRRAHT Trigger: GGTGTGCGCCCTCCTTGTGTGTTGTATTGAACTGCATCTCCTGTTACTCAGTGTCACCACTGAGGTCGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR CCA 72 bp | CAATTAAGGCATTTTCTGTACAGAGTCCTCAAGGCCTaGCGACAGGCAGTGGGAAAATCACGAGCACTGCAG | + |
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Preference number: 3 (lower is better) Translates to: QLRHFLYRVLKA*RQAVGKSRALQ Trigger: CTGCAGTGCTCGTGATTTTCCCACTGCCTGTCGCCAGGCCTTGAGGACTCTGTACAGAAAATGCCTTAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086556.12 ENSMUST00000147218.2 |
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| 3UTR CCA 72 bp | ATGTGCTCGGGTAAGTGCAAACAAGATGCCTTTCTGTaGAACTGTCATGTCAGAGCTCAGGGCACACCAGAG | + |
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Preference number: 3 (lower is better) Translates to: MCSGKCKQDAFL*NCHVRAQGTPE Trigger: CTCTGGTGTGCCCTGAGCTCTGACATGACAGTTCCACAGAAAGGCATCTTGTTTGCACTTACCCGAGCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR CCA 72 bp | ATAAAGCTTAGAAGCAACAGAAGTAAGGTCCCCAGTTaGGCTACTCGGGGCAGTCCCTTGCCACATCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: IKLRSNRSKVPS*ATRGSPLPHLE Trigger: TTCCAGATGTGGCAAGGGACTGCCCCGAGTAGCCCAACTGGGGACCTTACTTCTGTTGCTTCTAAGCTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR GCA 72 bp | CACCCAGAGGACTGCCATCTTTTCTTTGAACAGCAGTaGATCAGAAAGCCCTCAAAGTGCTCATGCGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: HPEDCHLFFEQQ*IRKPSKCSCVL Trigger: AAGGACGCATGAGCACTTTGAGGGCTTTCTGATGCACTGCTGTTCAAAGAAAAGATGGCAGTCCTCTGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR TCA 72 bp | GCTCATGCGTCCTTTGCCCCATCACCCTTAACTTCATaGCATTTGTCACCCAAAGGCAGAATTCCAGACTCT | + |
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Preference number: 3 (lower is better) Translates to: AHASFAPSPLTS*HLSPKGRIPDS Trigger: AGAGTCTGGAATTCTGCCTTTGGGTGACAAATGTCATGAAGTTAAGGGTGATGGGGCAAAGGACGCATGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR GCA 72 bp | TGCATCAGAAAGCCCTCAAAGTGCTCATGCGTCCTTTaGCCCATCACCCTTAACTTCATGACATTTGTCACC | + |
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Preference number: 3 (lower is better) Translates to: CIRKPSKCSCVL*PITLNFMTFVT Trigger: GGTGACAAATGTCATGAAGTTAAGGGTGATGGGGCAAAGGACGCATGAGCACTTTGAGGGCTTTCTGATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR-3UTR CAA 90 bp | CCACAAATTCATTCCAAGGAAGGTCTATCCAACCCCACAAGGCCTCATGGTTTCTGTTCTGTGACTCTCTaGAGAAACACAGCTGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: PQIHSKEGLSNPTRPHGFCSVTL*RNTAAE Trigger: TTCAGCAGCTGTGTTTCTCAAGAGAGTCACAGAACA...GAAACCATGAGGCCTTGTGGGGTTGGATAGACCTTCCTTGGAATGAATTTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR TCA 72 bp | GAAGCAAGCCCATTACAGTACCTGTTCCCACCACTCTaGACACTACTTCTCACACTACTATTGCACATCCTG | + |
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Preference number: 3 (lower is better) Translates to: EASPLQYLFPPL*TLLLTLLLHIL Trigger: CAGGATGTGCAATAGTAGTGTGAGAAGTAGTGTTCAGAGTGGTGGGAACAGGTACTGTAATGGGCTTGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR GCA 72 bp | ATGACATTTGTCACCCAAAGGCAGAATTCCAGACTCTaGCCTGGCTTCACCAGCCTTAAACCAACATCTCTT | + |
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Preference number: 3 (lower is better) Translates to: MTFVTQRQNSRL*PGFTSLKPTSL Trigger: AAGAGATGTTGGTTTAAGGCTGGTGAAGCCAGGGCAGAGTCTGGAATTCTGCCTTTGGGTGACAAATGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR GCA 72 bp | TTAGACATGATCATAGGTATGGATGGCACAGAGATGTaGTCGGGTAAGTGCAAACAAGATGCCTTTCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: LDMIIGMDGTEM*SGKCKQDAFLW Trigger: CCACAGAAAGGCATCTTGTTTGCACTTACCCGAGCACATCTCTGTGCCATCCATACCTATGATCATGTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR GCA 72 bp | GTTGTTTACCTTTTAAATCATGTTCGCGCCTTACAGTaGTTCAATTGCCAGGTTCGCTGTGACTCAACCTCC | + |
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Preference number: 3 (lower is better) Translates to: VVYLLNHVRALQ*FNCQVRCDSTS Trigger: GGAGGTTGAGTCACAGCGAACCTGGCAATTGAAGCACTGTAAGGCGCGAACATGATTTAAAAGGTAAACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| 3UTR GCA 72 bp | TCAAACTACAACTCTACTCTCCGACAAATCACCATTTaGATGTTGTGTTGCATGGTTACAGAACCACACCAC | + |
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Preference number: 3 (lower is better) Translates to: SNYNSTLRQITI*MLCCMVTEPHH Trigger: GTGGTGTGGTTCTGTAACCATGCAACACAACATGCAAATGGTGATTTGTCGGAGAGTAGAGTTGTAGTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| 3UTR GCA 72 bp | CTTTTAAATCATGTTCGCGCCTTACAGTGCTTCAATTaGCAGGTTCGCTGTGACTCAACCTCCTTTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LLNHVRALQCFN*QVRCDSTSFLK Trigger: TTTTAAAAAGGAGGTTGAGTCACAGCGAACCTGGCAATTGAAGCACTGTAAGGCGCGAACATGATTTAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
||
| 3UTR CCA 72 bp | TCTCTCCCTGAGTATCTGTTGATGCTAAGAACTCTATaGCTATTCAAACCAACACAAAGCTCAGACTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLPEYLLMLRTL*LFKPTQSSDFS Trigger: AGAAAAGTCTGAGCTTTGTGTTGGTTTGAATAGCCATAGAGTTCTTAGCATCAACAGATACTCAGGGAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| 3UTR TCA 72 bp | CTCCATGGCAGACACATGCTTTTACTAGAGATTAACTaGATGAGAAACAAGAGTTCGTTCTTTAATGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LHGRHMLLLEIN*MRNKSSFFNVV Trigger: AACAACATTAAAGAACGAACTCTTGTTTCTCATTCAGTTAATCTCTAGTAAAAGCATGTGTCTGCCATGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
||
| 3UTR GCA 72 bp | TCTGACCTTAGATTTAAAAGGGATCATCATGTTAAGTaGATAGCAGAAGTGGATAAAATTGACAAGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SDLRFKRDHHVK*IAEVDKIDKKG Trigger: CCCTTTCTTGTCAATTTTATCCACTTCTGCTATGCACTTAACATGATGATCCCTTTTAAATCTAAGGTCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| 3UTR CAA 72 bp | AGTAAGGTCCCCAGTTGGGCTACTCGGGGCAGTCCCTaGCCACATCTGGAAATGACACCCAGAGGACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKVPSWATRGSP*PHLEMTPRGLP Trigger: TGGCAGTCCTCTGGGTGTCATTTCCAGATGTGGCAAGGGACTGCCCCGAGTAGCCCAACTGGGGACCTTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
||
| CDS-3UTR GCA 90 bp | AGGCATTTTCTGTACAGAGTCCTCAAGGCCTGGCGACAGGCAGTGGGAAAATCAGCCACCTCCTCCGCCTaGAGAAGCTTGAACTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHFLYRVLKAWRQAVGKSATSSA*RSLNSP Trigger: TGGGGAGTTCAAGCTTCTGCAGGCGGAGGAGGTGGC...TGATTTTCCCACTGCCTGTCGCCAGGCCTTGAGGACTCTGTACAGAAAATGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGCATCAGAAAGCCCTCAAAGTGCTCATGCGTCCTTTGCCCCATCACCCTCCAAAAGTGGATGCTaGAGAGCAAGGGGCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSASESPQSAHASFAPSPSKSGC*RARGSE Trigger: CTCCGAGCCCCTTGCTCTCCAGCATCCACTTTTGGA...GGGTGATGGGGCAAAGGACGCATGAGCACTTTGAGGGCTTTCTGATGCACTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGGAGTAAACCCGCCAGAGTGCGTTCTCAGAGCCAGCTTCCCACATACAGGACGGGCCATGACTGTTaGGTACAGAGGGAAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TWSKPARVRSQSQLPTYRTGHDC*VQRETG Trigger: TCCAGTTTCCCTCTGTACTCAACAGTCATGGCCCGT...CCTGTATGTGGGAAGCTGGCTCTGAGAACGCACTCTGGCGGGTTTACTCCAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATTTTCTGTACAGAGTCCTCAAGGCCTGGCGACAGGCAGTGGGAAAATCAGGCTCCTGCAGGAGCTaGAGAAGGAACTGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RHFLYRVLKAWRQAVGKSGSCRS*RRNCHR Trigger: TCTGTGGCAGTTCCTTCTCCAGCTCCTGCAGGAGCC...TGATTTTCCCACTGCCTGTCGCCAGGCCTTGAGGACTCTGTACAGAAAATGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | AGGCATTTTCTGTACAGAGTCCTCAAGGCCTGGCGACAGGCAGTGGGAAAATCAGGCTCCAGGCTGAGGTaGCCTCTCCTTTCCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RHFLYRVLKAWRQAVGKSGSRLR*PLLSSI Trigger: TATGGAGGAAAGGAGAGGCCACCTCAGCCTGGAGCC...TGATTTTCCCACTGCCTGTCGCCAGGCCTTGAGGACTCTGTACAGAAAATGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGCATCAGAAAGCCCTCAAAGTGCTCATGCGTCCTTTGCCCCATCACCCGTTAGAACTCAGTGGTaGAGAAGGTGTCCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSASESPQSAHASFAPSPVRTQW*RRCPGR Trigger: CCTCCCAGGACACCTTCTCCACCACTGAGTTCTAAC...GGGTGATGGGGCAAAGGACGCATGAGCACTTTGAGGGCTTTCTGATGCACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
||
| CDS-3UTR CCA 90 bp | ATCCACCCAAACTCATACACAGGAACCCGCTCCCCTCTTCCTGTGCAGACATCGAGAGTGCTCCAAAAGTaGATGCTGGAGAGCAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IHPNSYTGTRSPLPVQTSRVLQK*MLESKG Trigger: CCCCTTGCTCTCCAGCATCCACTTTTGGAGCACTCT...CGATGTCTGCACAGGAAGAGGGGAGCGGGTTCCTGTGTATGAGTTTGGGTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
||
| CDS-3UTR CCA 90 bp | CCCACCTCAGCTTCCCAAGTGCTGAGATCACAGAAGTGGGCCATCATACATAGCGACGGTGTTGGCTCCTaGGCTTTCTTCTCTGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PTSASQVLRSQKWAIIHSDGVGS*AFFSAS Trigger: ACTAGCAGAGAAGAAAGCCCAGGAGCCAACACCGTC...GCTATGTATGATGGCCCACTTCTGTGATCTCAGCACTTGGGAAGCTGAGGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGGCCGAGCACCCTATCAGTCCTTTTTATCATCCACCCAAACTCATACAAGGAAGGGGTGTGGATaGAACCGGAGGAGTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRGRAPYQSFLSSTQTHTRKGCG*NRRSGV Trigger: AACCCCACTCCTCCGGTTCCATCCACACCCCTTCCT...TGTATGAGTTTGGGTGGATGATAAAAAGGACTGATAGGGTGCTCGGCCCCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
||
| CDS-3UTR CCA 90 bp | GAGTGCGTTCTCAGAGCCAGCTTCCCACATACAGGCAAATCCCTCTGTCAGTTCGTGGAGAAGGTGTCCTaGGAGGCTCCTTTAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ECVLRASFPHTGKSLCQFVEKVS*EAPLEE Trigger: TTCCTCTAAAGGAGCCTCCCAGGACACCTTCTCCAC...GAACTGACAGAGGGATTTGCCTGTATGTGGGAAGCTGGCTCTGAGAACGCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGGGGCCGAGCACCCTATCAGTCCTTTTTATCATCCACCCAAACTCATACAGATGACGGACGGTGTTaGCTCCTGGGCTTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRGRAPYQSFLSSTQTHTDDGRC*LLGFLL Trigger: GAGAAGAAAGCCCAGGAGCCAACACCGTCCGTCATC...TGTATGAGTTTGGGTGGATGATAAAAAGGACTGATAGGGTGCTCGGCCCCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTCTGTACAGAGTCCTCAAGGCCTGGCGACAGGCAGTGGGAAAATCACGAGTGGGTTAGAACTCAGTaGTGGAGAAGGTGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IFCTESSRPGDRQWENHEWVRTQ*WRRCPG Trigger: CCCAGGACACCTTCTCCACCACTGAGTTCTAACCCA...CTCGTGATTTTCCCACTGCCTGTCGCCAGGCCTTGAGGACTCTGTACAGAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086556.12 ENSMUST00000147218.2 |
||
| CDS-3UTR CCA 90 bp | TTCGAACCGAGTCATGGCGGGTGTCTGTTTCCTAGTCCCTTGGTCTCTCAGTCCGTCTGTGTCAATGTCTaGGTTAGAACTCAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FEPSHGGCLFPSPLVSQSVCVNV*VRTQWW Trigger: CCACCACTGAGTTCTAACCCAGACATTGACACAGAC...GGACTGAGAGACCAAGGGACTAGGAAACAGACACCCGCCATGACTCGGTTCGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086556.12 ENSMUST00000147218.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCTCTTAAGATAGCCATAAATGAACCAGTAACAGGTCTCCAGCCACCCCTCATCATGTGCTCATTCTaGGGCTCCTGCAGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RALKIAINEPVTGLQPPLIMCSF*GSCRSW Trigger: CCAGCTCCTGCAGGAGCCTCAGAATGAGCACATGAT...GAGGGGTGGCTGGAGACCTGTTACTGGTTCATTTATGGCTATCTTAAGAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR GCA 90 bp | ACACACCAGAGATCTGTGCTCACAGTGGGATCTCCTATCCTCACAGAATGTTCCAGCTGGAGAAGGAACTaGCACAGAGTGATGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: THQRSVLTVGSPILTECSSWRRN*HRVMAL Trigger: CAGTGCCATCACTCTGTGGCAGTTCCTTCTCCAGCT...GGAACATTCTGTGAGGATAGGAGATCCCACTGTGAGCACAGATCTCTGGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | AGAGCTCTTAAGATAGCCATAAATGAACCAGTAACAGGTCTCCAGCCACCCCTCGATGACGGACGGTGTTaGCTCCTGGGCTTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RALKIAINEPVTGLQPPLDDGRC*LLGFLL Trigger: GAGAAGAAAGCCCAGGAGCCAACACCGTCCGTCATC...GAGGGGTGGCTGGAGACCTGTTACTGGTTCATTTATGGCTATCTTAAGAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR TCA 90 bp | TCAGAAAGCCCTCAAAGTGCTCATGCGTCCTTTGCCCCATCACCCTTAACTTCAGGAAGTTCCATTGGCTaGGAAGCCACTGACTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SESPQSAHASFAPSPLTSGSSIG*EATDSM Trigger: CATTGAGTCAGTGGCTTCTCAGCCAATGGAACTTCC...TGAAGTTAAGGGTGATGGGGCAAAGGACGCATGAGCACTTTGAGGGCTTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
||
| CDS-3UTR CCA 90 bp | CCAAACTCATACACAGGAACCCGCTCCCCTCTTCCTGTGCAGACATCGGTGTACAGTTTCTTCAGAAGATaGAGAAAGACTAGGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PNSYTGTRSPLPVQTSVYSFFRR*RKTRAR Trigger: ACGAGCCCTAGTCTTTCTCCATCTTCTGAAGAAACT...GTACACCGATGTCTGCACAGGAAGAGGGGAGCGGGTTCCTGTGTATGAGTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGGGATCTCCTATCCTCACAGAATGTTCCAAAACCCACATTAAAACTGAGCAGGAAGGGGTGTGGATaGAACCGGAGGAGTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QWDLLSSQNVPKPTLKLSRKGCG*NRRSGV Trigger: AACCCCACTCCTCCGGTTCCATCCACACCCCTTCCT...GCTCAGTTTTAATGTGGGTTTTGGAACATTCTGTGAGGATAGGAGATCCCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | AAATTCATTCCAAGGAAGGTCTATCCAACCCCACAAGGCCTCATGGTTTCTTACCAGGTCTGGAGAAAATaGGCCCGGAGTGGAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KFIPRKVYPTPQGLMVSYQVWRK*ARSGRS Trigger: GGACCTTCCACTCCGGGCCCATTTTCTCCAGACCTG...GTAAGAAACCATGAGGCCTTGTGGGGTTGGATAGACCTTCCTTGGAATGAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR TCA 90 bp | CCACAAATTCATTCCAAGGAAGGTCTATCCAACCCCACAAGGCCTCATGGTTTCGGAAGTTCCATTGGCTaGGAAGCCACTGACTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PQIHSKEGLSNPTRPHGFGSSIG*EATDSM Trigger: CATTGAGTCAGTGGCTTCTCAGCCAATGGAACTTCC...GAAACCATGAGGCCTTGTGGGGTTGGATAGACCTTCCTTGGAATGAATTTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | GTGATGCACACCAGGGATGAGCTGAAGGGACAGCGTCTCTCCCTGAGTATCTGTCATACTCAACATCTTTaGAACTGCTGGTTTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VMHTRDELKGQRLSLSICHTQHL*NCWFQW Trigger: CCATTGAAACCAGCAGTTCCAAAGATGTTGAGTATG...ACAGATACTCAGGGAGAGACGCTGTCCCTTCAGCTCATCCCTGGTGTGCATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | AGAAGTGAGGTGGAGCTTGGACTCCAATTAAGGCATTTTCTGTACAGAGTCCTCGTGGAGAAGGTGTCCTaGGAGGCTCCTTTAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSEVELGLQLRHFLYRVLVEKVS*EAPLEE Trigger: TTCCTCTAAAGGAGCCTCCCAGGACACCTTCTCCAC...GAGGACTCTGTACAGAAAATGCCTTAATTGGAGTCCAAGCTCCACCTCACTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086556.12 ENSMUST00000147218.2 |
||
| CDS-3UTR CCA 90 bp | ATACAATTGTTGTCCATATCTAGTTGCACGTCTCTAACGACAGATCTCGACAGCACCTTGCAGTCTGGCTaGGCTCAAGGGAGCAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: IQLLSISSCTSLTTDLDSTLQSG*AQGSKR Trigger: CCGTTTGCTCCCTTGAGCCCAGCCAGACTGCAAGGT...GCTGTCGAGATCTGTCGTTAGAGACGTGCAACTAGATATGGACAACAATTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
||
| CDS-3UTR TCA 90 bp | GATCTCCTATCCTCACAGAATGTTCCAAAACCCACATTAAAACTGAGCTTTCAAGTCTTGGCTCCAGGCTaGGGTGGCCTCTCCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLLSSQNVPKPTLKLSFQVLAPG*GGLSFP Trigger: AGGAAAGGAGAGGCCACCTCAGCCTGGAGCCAAGAC...TTGAAAGCTCAGTTTTAATGTGGGTTTTGGAACATTCTGTGAGGATAGGAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | AAATTCATTCCAAGGAAGGTCTATCCAACCCCACAAGGCCTCATGGTTTCTTACTGGGTTAGAACTCAGTaGTGGAGAAGGTGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KFIPRKVYPTPQGLMVSYWVRTQ*WRRCPG Trigger: CCCAGGACACCTTCTCCACCACTGAGTTCTAACCCA...GTAAGAAACCATGAGGCCTTGTGGGGTTGGATAGACCTTCCTTGGAATGAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | AAATTCATTCCAAGGAAGGTCTATCCAACCCCACAAGGCCTCATGGTTTCTTACAGAGTGCTCCAAAAGTaGATGCTGGAGAGCAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KFIPRKVYPTPQGLMVSYRVLQK*MLESKG Trigger: CCCCTTGCTCTCCAGCATCCACTTTTGGAGCACTCT...GTAAGAAACCATGAGGCCTTGTGGGGTTGGATAGACCTTCCTTGGAATGAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGGGACAGCGTCTCTCCCTGAGTATCTGTTGATGCTAAGAACTCTATGGAGTTTCTTCAGAAGATaGAGAAAGACTAGGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: AEGTASLPEYLLMLRTLWSFFRR*RKTRAR Trigger: ACGAGCCCTAGTCTTTCTCCATCTTCTGAAGAAACT...CCATAGAGTTCTTAGCATCAACAGATACTCAGGGAGAGACGCTGTCCCTTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | TTCGAACCGAGTCATGGCGGGTGTCTGTTTCCTAGTCCCTTGGTCTCTCAGTCCAATGTCTCCAAAGCTTaGATAGTTTCTTCAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FEPSHGGCLFPSPLVSQSNVSKA*IVSSED Trigger: ATCTTCTGAAGAAACTATCCAAGCTTTGGAGACATT...GGACTGAGAGACCAAGGGACTAGGAAACAGACACCCGCCATGACTCGGTTCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086556.12 ENSMUST00000147218.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGGGATCTCCTATCCTCACAGAATGTTCCAAAACCCACATTAAAACTGAGCGTCTGTGTCAATGTCTaGGTTAGAACTCAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QWDLLSSQNVPKPTLKLSVCVNV*VRTQWW Trigger: CCACCACTGAGTTCTAACCCAGACATTGACACAGAC...GCTCAGTTTTAATGTGGGTTTTGGAACATTCTGTGAGGATAGGAGATCCCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | GATCTCCTATCCTCACAGAATGTTCCAAAACCCACATTAAAACTGAGCTTTCAATCCAAAAGTGGATGCTaGAGAGCAAGGGGCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLLSSQNVPKPTLKLSFQSKSGC*RARGSE Trigger: CTCCGAGCCCCTTGCTCTCCAGCATCCACTTTTGGA...TTGAAAGCTCAGTTTTAATGTGGGTTTTGGAACATTCTGTGAGGATAGGAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | TCGTTCTTTAATGTTGTTTACCTTTTAAATCATGTTCGCGCCTTACAGTGCTTCCAGGTCTGGAGAAAATaGGCCCGGAGTGGAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFFNVVYLLNHVRALQCFQVWRK*ARSGRS Trigger: GGACCTTCCACTCCGGGCCCATTTTCTCCAGACCTG...GAAGCACTGTAAGGCGCGAACATGATTTAAAAGGTAAACAACATTAAAGAACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
||
| 3UTR CAA 72 bp | CTCTACTCTCCGACAAATCACCATTTGCATGTTGTGTaGCATGGTTACAGAACCACACCACTCAAAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LYSPTNHHLHVV*HGYRTTPLKAH Trigger: GTGTGCTTTGAGTGGTGTGGTTCTGTAACCATGCAACACAACATGCAAATGGTGATTTGTCGGAGAGTAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR TCA 90 bp | AGAAGTGAGGTGGAGCTTGGACTCCAATTAAGGCATTTTCTGTACAGAGTCCTCCTTTTCTGGCAAAGCTaGATCCTCATTTTTAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSEVELGLQLRHFLYRVLLFWQS*ILIFRL Trigger: GAGCCTAAAAATGAGGATTCAGCTTTGCCAGAAAAG...GAGGACTCTGTACAGAAAATGCCTTAATTGGAGTCCAAGCTCCACCTCACTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086556.12 ENSMUST00000147218.2 |
||
| CDS-3UTR TCA 90 bp | GATCTCCTATCCTCACAGAATGTTCCAAAACCCACATTAAAACTGAGCTTTCAAACGGGCCATGACTGTTaGGTACAGAGGGAAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLLSSQNVPKPTLKLSFQTGHDC*VQRETG Trigger: TCCAGTTTCCCTCTGTACTCAACAGTCATGGCCCGT...TTGAAAGCTCAGTTTTAATGTGGGTTTTGGAACATTCTGTGAGGATAGGAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR GCA 90 bp | AGGCATTTTCTGTACAGAGTCCTCAAGGCCTGGCGACAGGCAGTGGGAAAATCACAACATCTTTGGAACTaGTGGTTTCAATGGAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: RHFLYRVLKAWRQAVGKSQHLWN*WFQWNL Trigger: TAAATTCCATTGAAACCAGCAGTTCCAAAGATGTTG...TGATTTTCCCACTGCCTGTCGCCAGGCCTTGAGGACTCTGTACAGAAAATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | GATCTCCTATCCTCACAGAATGTTCCAAAACCCACATTAAAACTGAGCTTTCAAGTTAGAACTCAGTGGTaGAGAAGGTGTCCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLLSSQNVPKPTLKLSFQVRTQW*RRCPGR Trigger: CCTCCCAGGACACCTTCTCCACCACTGAGTTCTAAC...TTGAAAGCTCAGTTTTAATGTGGGTTTTGGAACATTCTGTGAGGATAGGAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | TTTAACTTTCAAACTACAACTCTACTCTCCGACAAATCACCATTTGCATGTTGTACCTTGCAGTCTGGCTaGGCTCAAGGGAGCAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: FNFQTTTLLSDKSPFACCTLQSG*AQGSKR Trigger: CCGTTTGCTCCCTTGAGCCCAGCCAGACTGCAAGGT...ACAACATGCAAATGGTGATTTGTCGGAGAGTAGAGTTGTAGTTTGAAAGTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | ACACACCAGAGATCTGTGCTCACAGTGGGATCTCCTATCCTCACAGAATGTTCCAACTGCTGGTTTCAATaGAATTTAAAGCTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: THQRSVLTVGSPILTECSNCWFQ*NLKLHS Trigger: ACTGTGAAGCTTTAAATTCCATTGAAACCAGCAGTT...GGAACATTCTGTGAGGATAGGAGATCCCACTGTGAGCACAGATCTCTGGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS-3UTR CCA 90 bp | CCACAAATTCATTCCAAGGAAGGTCTATCCAACCCCACAAGGCCTCATGGTTTCAATGTCTCCAAAGCTTaGATAGTTTCTTCAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PQIHSKEGLSNPTRPHGFNVSKA*IVSSED Trigger: ATCTTCTGAAGAAACTATCCAAGCTTTGGAGACATT...GAAACCATGAGGCCTTGTGGGGTTGGATAGACCTTCCTTGGAATGAATTTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| 3UTR CAA 72 bp | TTCAAACTACAACTCTACTCTCCGACAAATCACCATTaGCATGTTGTGTTGCATGGTTACAGAACCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: FKLQLYSPTNHH*HVVLHGYRTTP Trigger: TGGTGTGGTTCTGTAACCATGCAACACAACATGCAAATGGTGATTTGTCGGAGAGTAGAGTTGTAGTTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
||
| CDS TCA 90 bp | CAGGTCTGGAGAAAATGGGCCCGGAGTGGAAGGTCCGTCCAGGCCTaGCAGAGTGAACGGGCCATGACTGTTGAGTACAGAGGGAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: QVWRKWARSGRSVQA*QSERAMTVEYRGKL Trigger: CAGTTTCCCTCTGTACTCAACAGTCATGGCCCGTTCACTCTGTCAGGCCTGGACGGACCTTCCACTCCGGGCCCATTTTCTCCAGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000147218.2 |
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| CDS TCA 90 bp | CCCGGAGTGGAAGGTCCGTCCAGGCCTGACAGAGTGAACGGGCCATaGCTGTTGAGTACAGAGGGAAACTGGAAAAGCGTATTAGCACCT | + |
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Preference number: 5 (lower is better) Translates to: PGVEGPSRPDRVNGP*LLSTEGNWKSVLAP Trigger: AGGTGCTAATACGCTTTTCCAGTTTCCCTCTGTACTCAACAGTCATGGCCCGTTCACTCTGTCAGGCCTGGACGGACCTTCCACTCCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000147218.2 |
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| CDS-3UTR CAA 90 bp | GAACTGTCATGTCAGAGCTCAGGGCACACCAGAGCCCCAGCATGGTCAATCCGCTCTCTGGAAGTTCCATaGGCTGAGAAGCCACTGACT | + |
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Preference number: 5 (lower is better) Translates to: ELSCQSSGHTRAPAWSIRSLEVP*AEKPLT Trigger: AGTCAGTGGCTTCTCAGCCAATGGAACTTCCAGAGA...GCGGATTGACCATGCTGGGGCTCTGGTGTGCCCTGAGCTCTGACATGACAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| CDS-3UTR CAA 90 bp | AAACCCGCCAGAGTGCGTTCTCAGAGCCAGCTTCCCACATACAGGCAAATCCCTAAGCGTATTAGCACCTaGCAGTCTGGCTGGGCTCAA | + |
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Preference number: 5 (lower is better) Translates to: KPARVRSQSQLPTYRQIPKRIST*QSGWAQ Trigger: TTGAGCCCAGCCAGACTGCAAGGTGCTAATACGCTT...AGGGATTTGCCTGTATGTGGGAAGCTGGCTCTGAGAACGCACTCTGGCGGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| CDS GCA 90 bp | AGCTTGGATAGTTTCTTCAGAAGATGGAGAAAGACTAGGGCTCGTTaGAAAGGCAGCAGCGACAGGCTCGATGGGCGGCTTTTTGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SLDSFFRRWRKTRAR*KGSSDRLDGRLFGR Trigger: CCTGCCAAAAAGCCGCCCATCGAGCCTGTCGCTGCTGCCTTTGCAACGAGCCCTAGTCTTTCTCCATCTTCTGAAGAAACTATCCAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000146432.2 ENSMUST00000147218.2 |
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| CDS-3UTR CAA 90 bp | TTCGAACCGAGTCATGGCGGGTGTCTGTTTCCTAGTCCCTTGGTCTCTCAGTCCTCCGCCTGCAGAAGCTaGAACTCCCCATTGTTAGAT | + |
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Preference number: 5 (lower is better) Translates to: FEPSHGGCLFPSPLVSQSSACRS*NSPLLD Trigger: ATCTAACAATGGGGAGTTCAAGCTTCTGCAGGCGGA...GGACTGAGAGACCAAGGGACTAGGAAACAGACACCCGCCATGACTCGGTTCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| CDS-3UTR CAA 90 bp | GTGATGCACACCAGGGATGAGCTGAAGGGACAGCGTCTCTCCCTGAGTATCTGTATATTAGGCTTGTTCTaGCGAATCCCCCAAAGACGA | + |
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Preference number: 5 (lower is better) Translates to: VMHTRDELKGQRLSLSICILGLF*RIPQRR Trigger: TCGTCTTTGGGGGATTCGCAAGAACAAGCCTAATAT...ACAGATACTCAGGGAGAGACGCTGTCCCTTCAGCTCATCCCTGGTGTGCATCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| CDS-3UTR CAA 90 bp | AGGCATTTTCTGTACAGAGTCCTCAAGGCCTGGCGACAGGCAGTGGGAAAATCAAGCTTGAACTCCCCATaGTTAGATGTCCAGCAGATC | + |
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Preference number: 5 (lower is better) Translates to: RHFLYRVLKAWRQAVGKSSLNSP*LDVQQI Trigger: GATCTGCTGGACATCTAACAATGGGGAGTTCAAGCT...TGATTTTCCCACTGCCTGTCGCCAGGCCTTGAGGACTCTGTACAGAAAATGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| CDS-3UTR CAA 90 bp | TTCGAACCGAGTCATGGCGGGTGTCTGTTTCCTAGTCCCTTGGTCTCTCAGTCCGTCAGTTCTAACCCTTaGGGCTTCTTAGATCTTGAT | + |
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Preference number: 5 (lower is better) Translates to: FEPSHGGCLFPSPLVSQSVSSNP*GFLDLD Trigger: ATCAAGATCTAAGAAGCCCAAAGGGTTAGAACTGAC...GGACTGAGAGACCAAGGGACTAGGAAACAGACACCCGCCATGACTCGGTTCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086556.12 ENSMUST00000147218.2 |
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| CDS-3UTR CAA 90 bp | GGGAACAGAGCTCTTAAGATAGCCATAAATGAACCAGTAACAGGTCTCCAGCCAAAGCGTATTAGCACCTaGCAGTCTGGCTGGGCTCAA | + |
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Preference number: 5 (lower is better) Translates to: GNRALKIAINEPVTGLQPKRIST*QSGWAQ Trigger: TTGAGCCCAGCCAGACTGCAAGGTGCTAATACGCTT...TGGCTGGAGACCTGTTACTGGTTCATTTATGGCTATCTTAAGAGCTCTGTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| CDS CCA 90 bp | TTGGCAGGCGTTGTCACAAATTTGATGACGGACGGTGTTGGCTCCTaGGCTTTCTTCTCTGCTAGTTTTTCCGCTGGATTCTCTATCTTT | + |
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Preference number: 5 (lower is better) Translates to: LAGVVTNLMTDGVGS*AFFSASFSAGFSIF Trigger: AAAGATAGAGAATCCAGCGGAAAAACTAGCAGAGAAGAAAGCCCAGGAGCCAACACCGTCCGTCATCAAATTTGTGACAACGCCTGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000146432.2 ENSMUST00000147218.2 |
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| CDS-3UTR CAA 90 bp | ATTTTCTGTACAGAGTCCTCAAGGCCTGGCGACAGGCAGTGGGAAAATCACGAGGTCAGTTCTAACCCTTaGGGCTTCTTAGATCTTGAT | + |
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Preference number: 5 (lower is better) Translates to: IFCTESSRPGDRQWENHEVSSNP*GFLDLD Trigger: ATCAAGATCTAAGAAGCCCAAAGGGTTAGAACTGAC...CTCGTGATTTTCCCACTGCCTGTCGCCAGGCCTTGAGGACTCTGTACAGAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086556.12 ENSMUST00000147218.2 |
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| CDS GCA 90 bp | GCTGAGGTGGCCTCTCCTTTCCTCCATACTCAACATCTTTGGAACTaGTGGTTTCAATGGAATTTAAAGCTTCACAGTCTCCCTCAATCC | + |
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Preference number: 5 (lower is better) Translates to: AEVASPFLHTQHLWN*WFQWNLKLHSLPQS Trigger: GGATTGAGGGAGACTGTGAAGCTTTAAATTCCATTGAAACCAGCAGTTCCAAAGATGTTGAGTATGGAGGAAAGGAGAGGCCACCTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000146432.2 |
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| CDS CCA 90 bp | GAGGTGGCCTCTCCTTTCCTCCATACTCAACATCTTTGGAACTGCTaGTTTCAATGGAATTTAAAGCTTCACAGTCTCCCTCAATCCTGC | + |
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Preference number: 5 (lower is better) Translates to: EVASPFLHTQHLWNC*FQWNLKLHSLPQSC Trigger: GCAGGATTGAGGGAGACTGTGAAGCTTTAAATTCCATTGAAACCAGCAGTTCCAAAGATGTTGAGTATGGAGGAAAGGAGAGGCCACCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000146432.2 |
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| CDS-3UTR CAA 90 bp | AGAGCTCTTAAGATAGCCATAAATGAACCAGTAACAGGTCTCCAGCCACCCCTCCCATACTCAACATCTTaGGAACTGCTGGTTTCAATG | + |
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Preference number: 5 (lower is better) Translates to: RALKIAINEPVTGLQPPLPYSTS*ELLVSM Trigger: CATTGAAACCAGCAGTTCCAAAGATGTTGAGTATGG...GAGGGGTGGCTGGAGACCTGTTACTGGTTCATTTATGGCTATCTTAAGAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| CDS-3UTR CAA 90 bp | ATTTTCTGTACAGAGTCCTCAAGGCCTGGCGACAGGCAGTGGGAAAATCACGAGGATGAGTTATTTGTTTaGTCCTTTTCTGGCAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: IFCTESSRPGDRQWENHEDELFV*SFSGKA Trigger: AGCTTTGCCAGAAAAGGACAAAACAAATAACTCATC...CTCGTGATTTTCCCACTGCCTGTCGCCAGGCCTTGAGGACTCTGTACAGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086556.12 ENSMUST00000147218.2 |
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| CDS GCA 90 bp | TGCTGGTTTCAATGGAATTTAAAGCTTCACAGTCTCCCTCAATCCTaGCTACCGTCAGTGGGTCCATTTTCAAAATCTCTGGATAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: CWFQWNLKLHSLPQS*LPSVGPFSKSLDRR Trigger: TCTCCTATCCAGAGATTTTGAAAATGGACCCACTGACGGTAGGCAGGATTGAGGGAGACTGTGAAGCTTTAAATTCCATTGAAACCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000146432.2 |
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| CDS-3UTR CAA 90 bp | GCTGAAGGGACAGCGTCTCTCCCTGAGTATCTGTTGATGCTAAGAACTCTATGGTTGAAAAGCTTCTTATaGGAGGTGTTCAGAGAGTTA | + |
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Preference number: 5 (lower is better) Translates to: AEGTASLPEYLLMLRTLWLKSFL*EVFREL Trigger: TAACTCTCTGAACACCTCCAATAAGAAGCTTTTCAA...CCATAGAGTTCTTAGCATCAACAGATACTCAGGGAGAGACGCTGTCCCTTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086556.12 |
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| CDS-3UTR CAA 90 bp | TGTTGTTTACCTTTTAAATCATGTTCGCGCCTTACAGTGCTTCAATTGCCAGGTTCTCTGGAAGTTCCATaGGCTGAGAAGCCACTGACT | + |
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Preference number: 5 (lower is better) Translates to: CCLPFKSCSRLTVLQLPGSLEVP*AEKPLT Trigger: AGTCAGTGGCTTCTCAGCCAATGGAACTTCCAGAGA...ACCTGGCAATTGAAGCACTGTAAGGCGCGAACATGATTTAAAAGGTAAACAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| CDS-3UTR CAA 90 bp | GTCCTTTGCCCCATCACCCTTAACTTCATGACATTTGTCACCCAAAGGCAGAATGATGAGTTATTTGTTTaGTCCTTTTCTGGCAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: VLCPITLNFMTFVTQRQNDELFV*SFSGKA Trigger: AGCTTTGCCAGAAAAGGACAAAACAAATAACTCATC...ATTCTGCCTTTGGGTGACAAATGTCATGAAGTTAAGGGTGATGGGGCAAAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147218.2 |
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| CDS CAA 90 bp | GGGCTCGTTGCAAAGGCAGCAGCGACAGGCTCGATGGGCGGCTTTTaGGCAGGCGTTGTCACAAATTTGATGACGGACGGTGTTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GLVAKAAATGSMGGF*AGVVTNLMTDGVGS Trigger: GGAGCCAACACCGTCCGTCATCAAATTTGTGACAACGCCTGCCAAAAAGCCGCCCATCGAGCCTGTCGCTGCTGCCTTTGCAACGAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000146432.2 ENSMUST00000147218.2 |
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| CDS TCA 72 bp | AGAAAATGGGCCCGGAGTGGAAGGTCCGTCCAGGCCTaGCAGAGTGAACGGGCCATGACTGTTGAGTACAGA | + |
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Preference number: 6 (lower is better) Translates to: RKWARSGRSVQA*QSERAMTVEYR Trigger: TCTGTACTCAACAGTCATGGCCCGTTCACTCTGTCAGGCCTGGACGGACCTTCCACTCCGGGCCCATTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000147218.2 |
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| CDS CAA 72 bp | GCAAAGGCAGCAGCGACAGGCTCGATGGGCGGCTTTTaGGCAGGCGTTGTCACAAATTTGATGACGGACGGT | + |
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Preference number: 6 (lower is better) Translates to: AKAAATGSMGGF*AGVVTNLMTDG Trigger: ACCGTCCGTCATCAAATTTGTGACAACGCCTGCCAAAAAGCCGCCCATCGAGCCTGTCGCTGCTGCCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000146432.2 ENSMUST00000147218.2 |
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| CDS CAA 90 bp | GCGACAGGCTCGATGGGCGGCTTTTTGGCAGGCGTTGTCACAAATTaGATGACGGACGGTGTTGGCTCCTGGGCTTTCTTCTCTGCTAGT | + |
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Preference number: 6 (lower is better) Translates to: ATGSMGGFLAGVVTN*MTDGVGSWAFFSAS Trigger: ACTAGCAGAGAAGAAAGCCCAGGAGCCAACACCGTCCGTCATCAAATTTGTGACAACGCCTGCCAAAAAGCCGCCCATCGAGCCTGTCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000146432.2 ENSMUST00000147218.2 |
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| CDS TCA 72 bp | GAAGGTCCGTCCAGGCCTGACAGAGTGAACGGGCCATaGCTGTTGAGTACAGAGGGAAACTGGAAAAGCGTA | + |
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Preference number: 6 (lower is better) Translates to: EGPSRPDRVNGP*LLSTEGNWKSV Trigger: TACGCTTTTCCAGTTTCCCTCTGTACTCAACAGTCATGGCCCGTTCACTCTGTCAGGCCTGGACGGACCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000147218.2 |
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| CDS GCA 72 bp | AGTTTCTTCAGAAGATGGAGAAAGACTAGGGCTCGTTaGAAAGGCAGCAGCGACAGGCTCGATGGGCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: SFFRRWRKTRAR*KGSSDRLDGRL Trigger: AAGCCGCCCATCGAGCCTGTCGCTGCTGCCTTTGCAACGAGCCCTAGTCTTTCTCCATCTTCTGAAGAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000146432.2 ENSMUST00000147218.2 |
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| CDS CAA 72 bp | GAGTACAGAGGGAAACTGGAAAAGCGTATTAGCACCTaGCAGTCTGGCTGGGCTCAAGGGAGCAAACGGGCT | + |
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Preference number: 6 (lower is better) Translates to: EYRGKLEKRIST*QSGWAQGSKRA Trigger: AGCCCGTTTGCTCCCTTGAGCCCAGCCAGACTGCAAGGTGCTAATACGCTTTTCCAGTTTCCCTCTGTACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000147218.2 |
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| CDS CAA 90 bp | ATGACTGTTGAGTACAGAGGGAAACTGGAAAAGCGTATTAGCACCTaGCAGTCTGGCTGGGCTCAAGGGAGCAAACGGGCTGAGAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: MTVEYRGKLEKRIST*QSGWAQGSKRAESA Trigger: AGCACTCTCAGCCCGTTTGCTCCCTTGAGCCCAGCCAGACTGCAAGGTGCTAATACGCTTTTCCAGTTTCCCTCTGTACTCAACAGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000147218.2 |
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| CDS CCA 72 bp | GTTGTCACAAATTTGATGACGGACGGTGTTGGCTCCTaGGCTTTCTTCTCTGCTAGTTTTTCCGCTGGATTC | + |
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Preference number: 6 (lower is better) Translates to: VVTNLMTDGVGS*AFFSASFSAGF Trigger: GAATCCAGCGGAAAAACTAGCAGAGAAGAAAGCCCAGGAGCCAACACCGTCCGTCATCAAATTTGTGACAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000146432.2 ENSMUST00000147218.2 |
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| CDS CAA 90 bp | GGGTCACTGCCTGTGACCACAAGGGCGGGTGTCAGTTCTAACCCTTaGGGCTTCTTAGATCTTGATGAGTTATTTGTTTTGTCCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: GSLPVTTRAGVSSNP*GFLDLDELFVLSFS Trigger: AGAAAAGGACAAAACAAATAACTCATCAAGATCTAAGAAGCCCAAAGGGTTAGAACTGACACCCGCCCTTGTGGTCACAGGCAGTGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000147218.2 |
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| CDS CAA 72 bp | CCTGTGACCACAAGGGCGGGTGTCAGTTCTAACCCTTaGGGCTTCTTAGATCTTGATGAGTTATTTGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: PVTTRAGVSSNP*GFLDLDELFVL Trigger: CAAAACAAATAACTCATCAAGATCTAAGAAGCCCAAAGGGTTAGAACTGACACCCGCCCTTGTGGTCACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000147218.2 |
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| CDS GCA 72 bp | CAATGGAATTTAAAGCTTCACAGTCTCCCTCAATCCTaGCTACCGTCAGTGGGTCCATTTTCAAAATCTCTG | + |
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Preference number: 6 (lower is better) Translates to: QWNLKLHSLPQS*LPSVGPFSKSL Trigger: CAGAGATTTTGAAAATGGACCCACTGACGGTAGGCAGGATTGAGGGAGACTGTGAAGCTTTAAATTCCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000146432.2 |
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| CDS CCA 72 bp | GAGGTGGCCTCTCCTTTCCTCCATACTCAACATCTTTaGAACTGCTGGTTTCAATGGAATTTAAAGCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: EVASPFLHTQHL*NCWFQWNLKLH Trigger: GTGAAGCTTTAAATTCCATTGAAACCAGCAGTTCCAAAGATGTTGAGTATGGAGGAAAGGAGAGGCCACCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000146432.2 |
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| CDS CAA 90 bp | AGTTCTAACCCTTTGGGCTTCTTAGATCTTGATGAGTTATTTGTTTaGTCCTTTTCTGGCAAAGCTGAATCCTCATTTTTAGGCTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SSNPLGFLDLDELFV*SFSGKAESSFLGSS Trigger: ACTGGAGCCTAAAAATGAGGATTCAGCTTTGCCAGAAAAGGACAAAACAAATAACTCATCAAGATCTAAGAAGCCCAAAGGGTTAGAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000147218.2 |
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| CDS CAA 90 bp | TTCTTCTCTGCTAGTTTTTCCGCTGGATTCTCTATCTTTATTGACTaGAAAAGCTTCTTATTGGAGGTGTTCAGAGAGTTAAGAGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: FFSASFSAGFSIFID*KSFLLEVFRELRVN Trigger: ATTTACTCTTAACTCTCTGAACACCTCCAATAAGAAGCTTTTCAAGTCAATAAAGATAGAGAATCCAGCGGAAAAACTAGCAGAGAAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027696.10 ENSMUST00000086556.12 ENSMUST00000146432.2 ENSMUST00000147218.2 |
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