Pregenerated sensors for ELAVL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003410Ensembl transcript IDs: ENSMUST00000003501.9, ENSMUST00000215901.2
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTGGGTCCATCCACCCCTGGGTCTGCTGGAGTGTGCTGGGTGCTTaGTTGCAGGTAGGGAGCACTCTGTCCCTACTTGAGGGAGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: LGSIHPWVCWSVLGA*LQVGSTLSLLEGGG Trigger: TCCTCCTCCCTCAAGTAGGGACAGAGTGCTCCCTACCTGCAAGCAAGCACCCAGCACACTCCAGCAGACCCAGGGGTGGATGGACCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR CCA 90 bp | GGTGGGCTAAGGAGTTTGTGTAGAGAACCCAAGGGTGGGGCTTGTTaGGGACCCAGGGAGAAGTGGTGGGACCAGCCTGGCTGGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: GGLRSLCREPKGGAC*GPREKWWDQPGWRK Trigger: CTTCCTCCAGCCAGGCTGGTCCCACCACTTCTCCCTGGGTCCCCAACAAGCCCCACCCTTGGGTTCTCTACACAAACTCCTTAGCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR CCA 90 bp | AAGAAGGGGCTGGACCCTCCTGGAGGTGAGGAGTCCCTGTCCTGCTaGGAGGGAGTGGGGAGTGGAAGGGCAGACTTAGAAACCACCAGA | + |
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Preference number: 1 (lower is better) Translates to: KKGLDPPGGEESLSC*EGVGSGRADLETTR Trigger: TCTGGTGGTTTCTAAGTCTGCCCTTCCACTCCCCACTCCCTCCCAGCAGGACAGGGACTCCTCACCTCCAGGAGGGTCCAGCCCCTTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR GCA 90 bp | TCCCTGCAGACCCTCCCCATCCGGATGCTCACCCTGTGGTGTTTATaGAGGTGTATGGGTCTGCCTGCTCTCGAGATTGCGCACACTCTC | + |
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Preference number: 1 (lower is better) Translates to: SLQTLPIRMLTLWCL*RCMGLPALEIAHTL Trigger: GAGAGTGTGCGCAATCTCGAGAGCAGGCAGACCCATACACCTGCATAAACACCACAGGGTGAGCATCCGGATGGGGAGGGTCTGCAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR CCA 90 bp | AGAACAACACCAGGAGGGGTGGGGAGAGAGAGTTGGACGCTCAAATaGGGCCGTGGCCAGACACCAAACGCAGAGGACACCGGAAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: RTTPGGVGRESWTLK*GRGQTPNAEDTGRK Trigger: CTTTCTTCCGGTGTCCTCTGCGTTTGGTGTCTGGCCACGGCCCCATTTGAGCGTCCAACTCTCTCTCCCCACCCCTCCTGGTGTTGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR TCA 90 bp | GGAAGAGCCCAGGCTTCAGGAAAGCTGGACAAGTGTCCTACCAACTaGGCTACCTCCCCAGCTCTCACTGGGGACTGGCGTCCAGACTTA | + |
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Preference number: 1 (lower is better) Translates to: GRAQASGKLDKCPTN*ATSPALTGDWRPDL Trigger: TAAGTCTGGACGCCAGTCCCCAGTGAGAGCTGGGGAGGTAGCTCAGTTGGTAGGACACTTGTCCAGCTTTCCTGAAGCCTGGGCTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR TCA 90 bp | CTCTCCTGGGTCACCATCATCCCTTATGCTGCCCCTGCACTTCCCTaGGCACCACGTCTCATTCCCATGGGGCTGAGACGAGGAACATCA | + |
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Preference number: 1 (lower is better) Translates to: LSWVTIIPYAAPALP*APRLIPMGLRRGTS Trigger: TGATGTTCCTCGTCTCAGCCCCATGGGAATGAGACGTGGTGCTCAGGGAAGTGCAGGGGCAGCATAAGGGATGATGGTGACCCAGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| 3UTR GCA 90 bp | GGAAAGCAAGGAGAACAGGGTGGGGACACCCTTCCCTCAATTCCCTaGAGACCCTCCCCATCCGGATGCTCACCCTGTGGTGTTTATGCA | + |
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Preference number: 1 (lower is better) Translates to: GKQGEQGGDTLPSIP*RPSPSGCSPCGVYA Trigger: TGCATAAACACCACAGGGTGAGCATCCGGATGGGGAGGGTCTGCAGGGAATTGAGGGAAGGGTGTCCCCACCCTGTTCTCCTTGCTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR CCA 90 bp | TCCCTCAATTCCCTGCAGACCCTCCCCATCCGGATGCTCACCCTGTaGTGTTTATGCAGGTGTATGGGTCTGCCTGCTCTCGAGATTGCG | + |
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Preference number: 1 (lower is better) Translates to: SLNSLQTLPIRMLTL*CLCRCMGLPALEIA Trigger: CGCAATCTCGAGAGCAGGCAGACCCATACACCTGCATAAACACCACAGGGTGAGCATCCGGATGGGGAGGGTCTGCAGGGAATTGAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR CCA 90 bp | GACCCAGGGAGAAGTGGTGGGACCAGCCTGGCTGGAGGAAGTAACTaGGCCAGGGTCTTAAGTAGGAACACCTTGTCTGGGCCTATAGGA | + |
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Preference number: 1 (lower is better) Translates to: DPGRSGGTSLAGGSN*ARVLSRNTLSGPIG Trigger: TCCTATAGGCCCAGACAAGGTGTTCCTACTTAAGACCCTGGCCCAGTTACTTCCTCCAGCCAGGCTGGTCCCACCACTTCTCCCTGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR TCA 90 bp | TTGGCCTCAGTGTTGTGGGGAGTGAGAGCCCCCTCCAGCCCACGGTaGTGCCAAAGTAGAACGAGGTATCGTGTGTTTGGATGCATGGAC | + |
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Preference number: 1 (lower is better) Translates to: LASVLWGVRAPSSPR*CQSRTRYRVFGCMD Trigger: GTCCATGCATCCAAACACACGATACCTCGTTCTACTTTGGCATCACCGTGGGCTGGAGGGGGCTCTCACTCCCCACAACACTGAGGCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR TCA 90 bp | CCTCTCCCTGTTCTGAGTCTTTCACCAGCTGTTCCTGCTGCTAGGTaGCCTCCAGGTCTCTCCTGGGTCACCATCATCCCTTATGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: PLPVLSLSPAVPAAR*PPGLSWVTIIPYAA Trigger: GGCAGCATAAGGGATGATGGTGACCCAGGAGAGACCTGGAGGTCACCTAGCAGCAGGAACAGCTGGTGAAAGACTCAGAACAGGGAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| 3UTR GCA 90 bp | CCGGATGCTCACCCTGTGGTGTTTATGCAGGTGTATGGGTCTGCCTaGTCTCGAGATTGCGCACACTCTCTCTCTTTTCCTCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: PDAHPVVFMQVYGSA*SRDCAHSLSFPLSL Trigger: GAGAGAGAGAGGAAAAGAGAGAGAGTGTGCGCAATCTCGAGAGCAGGCAGACCCATACACCTGCATAAACACCACAGGGTGAGCATCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR GCA 90 bp | CCATCCGGATGCTCACCCTGTGGTGTTTATGCAGGTGTATGGGTCTaGCTGCTCTCGAGATTGCGCACACTCTCTCTCTTTTCCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: PSGCSPCGVYAGVWV*LLSRLRTLSLFSSL Trigger: GAGAGAGGAAAAGAGAGAGAGTGTGCGCAATCTCGAGAGCAGGCAGACCCATACACCTGCATAAACACCACAGGGTGAGCATCCGGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR GCA 90 bp | TCCCCAAGGTCCAAGTGCATGTCCTTCCTTTCCTGTGGCCATGTTTaGTTATGTGCACGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: SPRSKCMSFLSCGHV*LCARACVRVCVCVC Trigger: ACACACACACACACACACACGCACGCACGCACGTGCACATAAGCAAACATGGCCACAGGAAAGGAAGGACATGCACTTGGACCTTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR CCA 90 bp | TGTATCTGTGTCCCCAAGGTCCAAGTGCATGTCCTTCCTTTCCTGTaGCCATGTTTGCTTATGTGCACGTGCGTGCGTGCGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: CICVPKVQVHVLPFL*PCLLMCTCVRACVC Trigger: ACACACACACGCACGCACGCACGTGCACATAAGCAAACATGGCCACAGGAAAGGAAGGACATGCACTTGGACCTTGGGGACACAGATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR GCA 90 bp | CCTGTGGTGTTTATGCAGGTGTATGGGTCTGCCTGCTCTCGAGATTaGGCACACTCTCTCTCTTTTCCTCTCTCTCTCTCTCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: PVVFMQVYGSACSRD*AHSLSFPLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGAGGAAAAGAGAGAGAGTGTGCGCAATCTCGAGAGCAGGCAGACCCATACACCTGCATAAACACCACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR CCA 90 bp | CCGGCTGCTCTTCCAAAGGGCATAGGATCAATTCCCAGCAAGCCATaGCAGGTTGCATCTGTCTTTAACTCCAGTCCAGGGATTCTGACA | + |
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Preference number: 1 (lower is better) Translates to: PAALPKGIGSIPSKP*QVASVFNSSPGILT Trigger: TGTCAGAATCCCTGGACTGGAGTTAAAGACAGATGCAACCTGCCATGGCTTGCTGGGAATTGATCCTATGCCCTTTGGAAGAGCAGCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| 3UTR CCA 90 bp | TACAGGTTCCCATGTCAAGCTCTGTCAGGTGTCCACAAGGAGTCTTaGGGATGTGACCCTGATGGAGAAGGAGGACAACTGTCCATGTCA | + |
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Preference number: 1 (lower is better) Translates to: YRFPCQALSGVHKES*GCDPDGEGGQLSMS Trigger: TGACATGGACAGTTGTCCTCCTTCTCCATCAGGGTCACATCCCCAAGACTCCTTGTGGACACCTGACAGAGCTTGACATGGGAACCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| 3UTR TCA 90 bp | CAAGGGAGTCTTCCACGGAATTTGAGGAAAGCCAACAATGGTAGCTaGTGTTTGGGGCTCAGGAAATGGCTATCGAGCCCCTGCTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: QGSLPRNLRKANNGS*CLGLRKWLSSPCLE Trigger: TTCTAAGCAGGGGCTCGATAGCCATTTCCTGAGCCCCAAACATCAGCTACCATTGTTGGCTTTCCTCAAATTCCGTGGAAGACTCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| 3UTR TCA 90 bp | CCTGATGGAGAAGGAGGACAACTGTCCATGTCACCACCATGCTCCTaGCATTGTTCTCTTGGCTGTCTCATCTGTCAGGTAACACTTGGT | + |
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Preference number: 1 (lower is better) Translates to: PDGEGGQLSMSPPCS*HCSLGCLICQVTLG Trigger: ACCAAGTGTTACCTGACAGATGAGACAGCCAAGAGAACAATGTCAGGAGCATGGTGGTGACATGGACAGTTGTCCTCCTTCTCCATCAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| 3UTR GCA 90 bp | CACATGGTTTTGTGGACAAGCAGCCAACGTCTGTATCTCTGTTTATaGAGCGCCAAGGGTCTGTCTGTGTCTCTGTTCTCTGGTGTGGAT | + |
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Preference number: 1 (lower is better) Translates to: HMVLWTSSQRLYLCL*SAKGLSVSLFSGVD Trigger: ATCCACACCAGAGAACAGAGACACAGACAGACCCTTGGCGCTGCATAAACAGAGATACAGACGTTGGCTGCTTGTCCACAAAACCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR GCA 90 bp | CTGGGGACTGGCGTCCAGACTTACATCCAAATGGATCTGTCACAGTaGATTTCACACATCACATGGTTTTGTGGACAAGCAGCCAACGTC | + |
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Preference number: 1 (lower is better) Translates to: LGTGVQTYIQMDLSQ*ISHITWFCGQAANV Trigger: GACGTTGGCTGCTTGTCCACAAAACCATGTGATGTGTGAAATGCACTGTGACAGATCCATTTGGATGTAAGTCTGGACGCCAGTCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR GCA 90 bp | TGCCAGCACTACATGAGACCCTGTGTCAGGAGACATAGAGAGGGCTaGTGTGTGCTCTTAGTGTTTATTCAAAAGGCCTTGAGCATCCTC | + |
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Preference number: 1 (lower is better) Translates to: CQHYMRPCVRRHREG*CVLLVFIQKALSIL Trigger: GAGGATGCTCAAGGCCTTTTGAATAAACACTAAGAGCACACAGCAGCCCTCTCTATGTCTCCTGACACAGGGTCTCATGTAGTGCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| 3UTR TCA 90 bp | GGTTCACAGCAATTGTGGAGAGGCAAGGGAGTCTTCCACGGAATTTaGGGAAAGCCAACAATGGTAGCTGATGTTTGGGGCTCAGGAAAT | + |
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Preference number: 1 (lower is better) Translates to: GSQQLWRGKGVFHGI*GKPTMVADVWGSGN Trigger: ATTTCCTGAGCCCCAAACATCAGCTACCATTGTTGGCTTTCCTCAAATTCCGTGGAAGACTCCCTTGCCTCTCCACAATTGCTGTGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| 3UTR TCA 90 bp | CAGCTTGTGACACATCAACACGGAACCTTTCACAGAGCAGGGTTGTaGGTGAAGCTAGGAAGAGCTCAAGGTTCACAGCAATTGTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: QLVTHQHGTFHRAGL*VKLGRAQGSQQLWR Trigger: TCTCCACAATTGCTGTGAACCTTGAGCTCTTCCTAGCTTCACTCACAACCCTGCTCTGTGAAAGGTTCCGTGTTGATGTGTCACAAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| 3UTR CCA 90 bp | ACCACGTCTCATTCCCATGGGGCTGAGACGAGGAACATCAGTGGCTaGATTGTTATAGCCACCTTTTATTATGTGCCAAGCACTGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: TTSHSHGAETRNISG*IVIATFYYVPSTVF Trigger: GAACACAGTGCTTGGCACATAATAAAAGGTGGCTATAACAATCCAGCCACTGATGTTCCTCGTCTCAGCCCCATGGGAATGAGACGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGGAAGAAGGGGCTGGACCCTCCTGGAGGTGAGGAGTCCCTGTCCTGCTGGGCTGCTCCCTGTTCTCTaGTCAGGGACTGGGGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: RGRRGWTLLEVRSPCPAGLLPVL*SGTGAG Trigger: CCCCGCCCCAGTCCCTGAGCAGAGAACAGGGAGCAG...CCCAGCAGGACAGGGACTCCTCACCTCCAGGAGGGTCCAGCCCCTTCTTCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTGATGCTGGCCCTATGGACTCTCAGCCCTCAGCCCTGCTCCCTACACCCTCTCTGCTCAGGGACTaGGGCGGGGGATGGGGACGC | + |
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Preference number: 2 (lower is better) Translates to: TCDAGPMDSQPSALLPTPSLLRD*GGGWGR Trigger: GCGTCCCCATCCCCCGCCCCAGTCCCTGAGCAGAGA...GGGTGTAGGGAGCAGGGCTGAGGGCTGAGAGTCCATAGGGCCAGCATCACAGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAAGAAGGGGCTGGACCCTCCTGGAGGTGAGGAGTCCCTGTCCTGCTGGGCACCCCTGGGTCTGCTaGAGTGTGCTGGGTGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: RGRRGWTLLEVRSPCPAGHPWVC*SVLGAC Trigger: GCAAGCACCCAGCACACTCCAGCAGACCCAGGGGTG...CCCAGCAGGACAGGGACTCCTCACCTCCAGGAGGGTCCAGCCCCTTCTTCCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAAGAAGGGGCTGGACCCTCCTGGAGGTGAGGAGTCCCTGTCCTGCTGGGTGTACGTCTGTGTGTTaGGCAGCAGGGAGGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: RGRRGWTLLEVRSPCPAGCTSVC*AAGRPL Trigger: CAGGGGCCTCCCTGCTGCCCAACACACAGACGTACA...CCCAGCAGGACAGGGACTCCTCACCTCCAGGAGGGTCCAGCCCCTTCTTCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR GCA 90 bp | AGCACTCTGTCCCTACTTGAGGGAGGAGGACTGCAGACCTCTCCCCAGACCCAGCTCTCTCTCTCTCTCTaGTGCCCGGGGAGGGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: STLSLLEGGGLQTSPQTQLSLSL*CPGREG Trigger: GCCCTCCCTCCCCGGGCAGCAGAGAGAGAGAGAGAG...CTGGGTCTGGGGAGAGGTCTGCAGTCCTCCTCCCTCAAGTAGGGACAGAGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR CAA 90 bp | GGGTCCATCCACCCCTGGGTCTGCTGGAGTGTGCTGGGTGCTTGCTaGCAGGTAGGGAGCACTCTGTCCCTACTTGAGGGAGGAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: GSIHPWVCWSVLGAC*QVGSTLSLLEGGGL Trigger: CAGTCCTCCTCCCTCAAGTAGGGACAGAGTGCTCCCTACCTGCAAGCAAGCACCCAGCACACTCCAGCAGACCCAGGGGTGGATGGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR CCA 90 bp | AGCACTCTGTCCCTACTTGAGGGAGGAGGACTGCAGACCTCTCCCCAGACCCAGCAGCAGGGAGGCCCCTaGTGGGCTAAGGAGTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: STLSLLEGGGLQTSPQTQQQGGP*WAKEFV Trigger: CACAAACTCCTTAGCCCACCAGGGGCCTCCCTGCTG...CTGGGTCTGGGGAGAGGTCTGCAGTCCTCCTCCCTCAAGTAGGGACAGAGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAAGAAGGGGCTGGACCCTCCTGGAGGTGAGGAGTCCCTGTCCTGCTGGGGGTGTGTGTGGGGCATaGCTGCAAAATCCATTCCGA | + |
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Preference number: 2 (lower is better) Translates to: RGRRGWTLLEVRSPCPAGGVCGA*LQNPFR Trigger: TCGGAATGGATTTTGCAGCCATGCCCCACACACACC...CCCAGCAGGACAGGGACTCCTCACCTCCAGGAGGGTCCAGCCCCTTCTTCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGGAAGAAGGGGCTGGACCCTCCTGGAGGTGAGGAGTCCCTGTCCTGCTGGGTCTGGGCCTATAGGATaGTGTGGACATGGGCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: RGRRGWTLLEVRSPCPAGSGPIG*CGHGLL Trigger: CAAAAGCCCATGTCCACAGCATCCTATAGGCCCAGA...CCCAGCAGGACAGGGACTCCTCACCTCCAGGAGGGTCCAGCCCCTTCTTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTGATGCTGGCCCTATGGACTCTCAGCCCTCAGCCCTGCTCCCTACACCCGCAAGGAGAACAGGGTaGGGACACCCTTCCCTCAAT | + |
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Preference number: 2 (lower is better) Translates to: TCDAGPMDSQPSALLPTPARRTG*GHPSLN Trigger: ATTGAGGGAAGGGTGTCCCCACCCTGTTCTCCTTGC...GGGTGTAGGGAGCAGGGCTGAGGGCTGAGAGTCCATAGGGCCAGCATCACAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCTTCAGGAAAGCTGGACAAGTGTCCTACCAACTGAGCTACCTCCCCAGCGAACAAGCCCCAGCCTaGGGTGGGGAAAGCAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: PGFRKAGQVSYQLSYLPSEQAPA*GGESKE Trigger: CTCCTTGCTTTCCCCACCTCAGGCTGGGGCTTGTTC...GCTGGGGAGGTAGCTCAGTTGGTAGGACACTTGTCCAGCTTTCCTGAAGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGGAAGAAGGGGCTGGACCCTCCTGGAGGTGAGGAGTCCCTGTCCTGCTGGGCAGCTCCCTTCAACCTaGAAACTCATGAAGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: RGRRGWTLLEVRSPCPAGQLPST*KLMKEQ Trigger: CTGTTCCTTCATGAGTTTGCAGGTTGAAGGGAGCTG...CCCAGCAGGACAGGGACTCCTCACCTCCAGGAGGGTCCAGCCCCTTCTTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCACGGTGATGCCAAAGTAGAACGAGGTATCGTGTGTTTGGATGCATGGACGGGACCCAGGGAGAAGTaGTGGGACCAGCCTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: AHGDAKVERGIVCLDAWTGPREK*WDQPGW Trigger: CCAGCCAGGCTGGTCCCACCACTTCTCCCTGGGTCC...CGTCCATGCATCCAAACACACGATACCTCGTTCTACTTTGGCATCACCGTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGGGGCATGGCTCAATGCAGGCTTAGTATGCAGAAGTGCCAGGGTCCTGCTAGACAGGCAGAAATaGCTACCCAGCGGTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: GLGAWLNAGLVCRSARVLLDRQK*LPSGPR Trigger: TCTGGGACCGCTGGGTAGCCATTTCTGCCTGTCTAG...CAGGACCCTGGCACTTCTGCATACTAAGCCTGCATTGAGCCATGCCCCCAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGTCAGGGTGTGTGTGGGGCATGGCTGCAAAATCCATTCCGAAGCCGGGCCGAAGTGTCCTACCAACTaGGCTACCTCCCCAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: KVRVCVGHGCKIHSEAGPKCPTN*ATSPAL Trigger: GAGAGCTGGGGAGGTAGCTCAGTTGGTAGGACACTT...CGGCCCGGCTTCGGAATGGATTTTGCAGCCATGCCCCACACACACCCTGACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR TCA 90 bp | GCACTCTTGAGGCAGGTGGATCTCCGTGAGTTCCAAGCCAGCCTGGTCTACAGACTCAGCGTGGGGAGATaGCTCTCAAAGTCTGGACCC | + |
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Preference number: 2 (lower is better) Translates to: ALLRQVDLREFQASLVYRLSVGR*LSKSGP Trigger: GGGTCCAGACTTTGAGAGTCATCTCCCCACGCTGAG...TCTGTAGACCAGGCTGGCTTGGAACTCACGGAGATCCACCTGCCTCAAGAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGCTTCAGGAAAGCTGGACAAGTGTCCTACCAACTGAGCTACCTCCCCAGCCTTCCCTCAATTCCCTaGAGACCCTCCCCATCCGGA | + |
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Preference number: 2 (lower is better) Translates to: PGFRKAGQVSYQLSYLPSLPSIP*RPSPSG Trigger: TCCGGATGGGGAGGGTCTGCAGGGAATTGAGGGAAG...GCTGGGGAGGTAGCTCAGTTGGTAGGACACTTGTCCAGCTTTCCTGAAGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR TCA 90 bp | AGAATGAATGAGGTCTGTGTGCCACACCAGGCTTGTGCAGTGCTGGGGAAGAGCACCAAGACGAGAGAGTaGACAAGCCCCAGCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: RMNEVCVPHQACAVLGKSTKTRE*TSPSLR Trigger: CCTCAGGCTGGGGCTTGTTCACTCTCTCGTCTTGGT...GCTCTTCCCCAGCACTGCACAAGCCTGGTGTGGCACACAGACCTCATTCATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR TCA 90 bp | ACCTGTGATGCTGGCCCTATGGACTCTCAGCCCTCAGCCCTGCTCCCTACACCCCAAAAGCCATCACCATaGACCAAACCAAGACGAGAG | + |
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Preference number: 2 (lower is better) Translates to: TCDAGPMDSQPSALLPTPQKPSP*TKPRRE Trigger: CTCTCGTCTTGGTTTGGTTCATGGTGATGGCTTTTG...GGGTGTAGGGAGCAGGGCTGAGGGCTGAGAGTCCATAGGGCCAGCATCACAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| 3UTR-3UTR TCA 90 bp | GCCCACGGTGATGCCAAAGTAGAACGAGGTATCGTGTGTTTGGATGCATGGACGTGGGCAAGGGAGGCCTaGGTAGGGCACCATTGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: AHGDAKVERGIVCLDAWTWAREA*VGHHCV Trigger: GACACAATGGTGCCCTACTCAGGCCTCCCTTGCCCA...CGTCCATGCATCCAAACACACGATACCTCGTTCTACTTTGGCATCACCGTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR CAA 90 bp | ATCGTGTGTTTGGATGCATGGACGCCATGTGTGTACGTCTGTGTGTaGGGCAGCAGGGAGGCCCCTGGTGGGCTAAGGAGTTTGTGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: IVCLDAWTPCVYVCV*GSREAPGGLRSLCR Trigger: TCTACACAAACTCCTTAGCCCACCAGGGGCCTCCCTGCTGCCCAACACACAGACGTACACACATGGCGTCCATGCATCCAAACACACGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGGAGATGACTCTCAAAGTCTGGACCCCACATAACCTGACCACATGGGACTCAACAGCCAGCCCTCCATaGTCCTTCCAAAGCTGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: GEMTLKVWTPHNLTTWDSTASPP*SFQSCS Trigger: GGAGCAGCTTTGGAAGGATCATGGAGGGCTGGCTGT...TGAGTCCCATGTGGTCAGGTTATGTGGGGTCCAGACTTTGAGAGTCATCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCCACGGTGATGCCAAAGTAGAACGAGGTATCGTGTGTTTGGATGCATGGACGAGCCCCAGCCTGAGGTaGGGAAAGCAAGGAGAACAG | + |
|
Preference number: 2 (lower is better) Translates to: AHGDAKVERGIVCLDAWTSPSLR*GKQGEQ Trigger: CTGTTCTCCTTGCTTTCCCCACCTCAGGCTGGGGCT...CGTCCATGCATCCAAACACACGATACCTCGTTCTACTTTGGCATCACCGTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTCAGGGTGTGTGTGGGGCATGGCTGCAAAATCCATTCCGAAGCCGGGCCGGTGTGTTTGGATGCATaGACGCCATGTGTGTACGTC | + |
|
Preference number: 2 (lower is better) Translates to: KVRVCVGHGCKIHSEAGPVCLDA*TPCVYV Trigger: GACGTACACACATGGCGTCCATGCATCCAAACACAC...CGGCCCGGCTTCGGAATGGATTTTGCAGCCATGCCCCACACACACCCTGACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTCCAGCCCACGGTGATGCCAAAGTAGAACGAGGTATCGTGTGTTTGGATGCAGTGTGTGTGTACCTGTaGTGCTGGCCCTATGGACTC | + |
|
Preference number: 2 (lower is better) Translates to: PPAHGDAKVERGIVCLDAVCVYL*CWPYGL Trigger: GAGTCCATAGGGCCAGCATCACAGGTACACACACAC...TGCATCCAAACACACGATACCTCGTTCTACTTTGGCATCACCGTGGGCTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR-3UTR TCA 90 bp | GCACTCTTGAGGCAGGTGGATCTCCGTGAGTTCCAAGCCAGCCTGGTCTACAGAGCCAACAATGGTAGCTaGTGTTTGGGGCTCAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: ALLRQVDLREFQASLVYRANNGS*CLGLRK Trigger: TTTCCTGAGCCCCAAACATCAGCTACCATTGTTGGC...TCTGTAGACCAGGCTGGCTTGGAACTCACGGAGATCCACCTGCCTCAAGAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGCATTCCCACTGACTCCCTCACCGTCAGAACTAAGTCACTCAGCGTGGGGGGTTCACAGCAATTGTaGAGAGGCAAGGGAGTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SSIPTDSLTVRTKSLSVGGSQQL*RGKGVF Trigger: GAAGACTCCCTTGCCTCTCCACAATTGCTGTGAACC...CCCCACGCTGAGTGACTTAGTTCTGACGGTGAGGGAGTCAGTGGGAATGCTGCT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGTCTACAGAGTGAGTTCCAGGACACCAGGCTATACAGTGAAGCCCTGTCTCACAGAGCAGGGTTGTaGGTGAAGCTAGGAAGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PGLQSEFQDTRLYSEALSHRAGL*VKLGRA Trigger: AGCTCTTCCTAGCTTCACTCACAACCCTGCTCTGTG...AGACAGGGCTTCACTGTATAGCCTGGTGTCCTGGAACTCACTCTGTAGACCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGCTTCAGGAAAGCTGGACAAGTGTCCTACCAACTGAGCTACCTCCCCAGCCATCACATGGTTTTGTaGACAAGCAGCCAACGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PGFRKAGQVSYQLSYLPSHHMVL*TSSQRL Trigger: CAGACGTTGGCTGCTTGTCCACAAAACCATGTGATG...GCTGGGGAGGTAGCTCAGTTGGTAGGACACTTGTCCAGCTTTCCTGAAGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR-3UTR CCA 90 bp | TACAGGTTCCCATGTCAAGCTCTGTCAGGTGTCCACAAGGAGTCTTGGGGATGTGAGGGGCTAGGGAGATaGCTCAGGCCACTAAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: YRFPCQALSGVHKESWGCEGLGR*LRPLRT Trigger: TGTTCTTAGTGGCCTGAGCCATCTCCCTAGCCCCTC...ACATCCCCAAGACTCCTTGTGGACACCTGACAGAGCTTGACATGGGAACCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR CAA 90 bp | CCCTGTGGTGTTTATGCAGGTGTATGGGTCTGCCTGCTCTCGAGATaGCGCACACTCTCTCTCTTTTCCTCTCTCTCTCTCTCTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: PCGVYAGVWVCLLSR*RTLSLFSSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGGAAAAGAGAGAGAGTGTGCGCAATCTCGAGAGCAGGCAGACCCATACACCTGCATAAACACCACAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGCACATGCCTTTAATCACAGCACTCTTGAGGCAGGTGGATCTCCGTGAGTTCAAGCAGCATTCCCACTaGCTCCCTCACCGTCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: MHMPLITALLRQVDLREFKQHSH*LPHRQN Trigger: GTTCTGACGGTGAGGGAGTCAGTGGGAATGCTGCTT...GAACTCACGGAGATCCACCTGCCTCAAGAGTGCTGTGATTAAAGGCATGTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAATGAATGAGGTCTGTGTGCCACACCAGGCTTGTGCAGTGCTGGGGAAGAGCAGGCTTCAGGAAAGCTaGACAAGTGTCCTACCAACT | + |
|
Preference number: 2 (lower is better) Translates to: RMNEVCVPHQACAVLGKSRLQES*TSVLPT Trigger: AGTTGGTAGGACACTTGTCCAGCTTTCCTGAAGCCT...GCTCTTCCCCAGCACTGCACAAGCCTGGTGTGGCACACAGACCTCATTCATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGTCTACAGAGTGAGTTCCAGGACACCAGGCTATACAGTGAAGCCCTGTCTATTCCCAGCAAGCCATaGCAGGTTGCATCTGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: PGLQSEFQDTRLYSEALSIPSKP*QVASVF Trigger: AAAGACAGATGCAACCTGCCATGGCTTGCTGGGAAT...AGACAGGGCTTCACTGTATAGCCTGGTGTCCTGGAACTCACTCTGTAGACCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGTTCCTGCTGCTAGGTGACCTCCAGGTCTCTCCTGGGTCACCATCATCCCTTAGGAACATCAGTGGCTaGATTGTTATAGCCACCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LFLLLGDLQVSPGSPSSLRNISG*IVIATF Trigger: AAAGGTGGCTATAACAATCCAGCCACTGATGTTCCT...AAGGGATGATGGTGACCCAGGAGAGACCTGGAGGTCACCTAGCAGCAGGAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGCTTCAGGAAAGCTGGACAAGTGTCCTACCAACTGAGCTACCTCCCCAGCAGACTTACATCCAAATaGATCTGTCACAGTGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: PGFRKAGQVSYQLSYLPSRLTSK*ICHSAF Trigger: AAATGCACTGTGACAGATCCATTTGGATGTAAGTCT...GCTGGGGAGGTAGCTCAGTTGGTAGGACACTTGTCCAGCTTTCCTGAAGCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGGAGATGACTCTCAAAGTCTGGACCCCACATAACCTGACCACATGGGACTCACTCAAACCCAGCTTTTaGTATTCAACATGTTCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: GEMTLKVWTPHNLTTWDSLKPSF*YSTCSQ Trigger: TTGGGAACATGTTGAATATCAAAAGCTGGGTTTGAG...TGAGTCCCATGTGGTCAGGTTATGTGGGGTCCAGACTTTGAGAGTCATCTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR CAA 90 bp | CATCCAAATGGATCTGTCACAGTGCATTTCACACATCACATGGTTTaGTGGACAAGCAGCCAACGTCTGTATCTCTGTTTATGCAGCGCC | + |
|
Preference number: 2 (lower is better) Translates to: HPNGSVTVHFTHHMV*WTSSQRLYLCLCSA Trigger: GGCGCTGCATAAACAGAGATACAGACGTTGGCTGCTTGTCCACAAAACCATGTGATGTGTGAAATGCACTGTGACAGATCCATTTGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGATTGTTATAGCCACCTTTTATTATGTGCCAAGCACTGTGTTCTATCTCAATCTTAGAATCCTCCAGTaGGGGGCTGGGGGCATGGCT | + |
|
Preference number: 2 (lower is better) Translates to: WIVIATFYYVPSTVFYLNLRILQ*GAGGMA Trigger: AGCCATGCCCCCAGCCCCTCACTGGAGGATTCTAAG...ATTGAGATAGAACACAGTGCTTGGCACATAATAAAAGGTGGCTATAACAATCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR-3UTR GCA 90 bp | ACATCACATGGTTTTGTGGACAAGCAGCCAACGTCTGTATCTCTGTTTATGCAGGCCTGCTCTCGAGATTaGGCACACTCTCTCTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: TSHGFVDKQPTSVSLFMQACSRD*AHSLSF Trigger: AAAAGAGAGAGAGTGTGCGCAATCTCGAGAGCAGGC...CTGCATAAACAGAGATACAGACGTTGGCTGCTTGTCCACAAAACCATGTGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCACACATCACATGGTTTTGTGGACAAGCAGCCAACGTCTGTATCTCTGTTTATCCTGTGGCCATGTTTaGTTATGTGCACGTGCGTGC | + |
|
Preference number: 2 (lower is better) Translates to: FTHHMVLWTSSQRLYLCLSCGHV*LCARAC Trigger: GCACGCACGTGCACATAAGCAAACATGGCCACAGGA...TAAACAGAGATACAGACGTTGGCTGCTTGTCCACAAAACCATGTGATGTGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR GCA 72 bp | GGTGGGGGACACCTTGGGTCCATCCACCCCTGGGTCTaGTGGAGTGTGCTGGGTGCTTGCTTGCAGGTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GGGHLGSIHPWV*WSVLGACLQVG Trigger: CCCTACCTGCAAGCAAGCACCCAGCACACTCCAGCAGACCCAGGGGTGGATGGACCCAAGGTGTCCCCCACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR CCA 72 bp | GGGGGACACCTTGGGTCCATCCACCCCTGGGTCTGCTaGAGTGTGCTGGGTGCTTGCTTGCAGGTAGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GGHLGSIHPWVC*SVLGACLQVGS Trigger: GCTCCCTACCTGCAAGCAAGCACCCAGCACACTCCAGCAGACCCAGGGGTGGATGGACCCAAGGTGTCCCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCACTCTGTCCCTACTTGAGGGAGGAGGACTGCAGACCTCTCCCCAGACCCAGACCCAAGGGTGGGGCTaGTTGGGGACCCAGGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: STLSLLEGGGLQTSPQTQTQGWG*LGTQGE Trigger: TTCTCCCTGGGTCCCCAACAAGCCCCACCCTTGGGT...CTGGGTCTGGGGAGAGGTCTGCAGTCCTCCTCCCTCAAGTAGGGACAGAGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTCAGGGTGTGTGTGGGGCATGGCTGCAAAATCCATTCCGAAGCCGGGCCGGTGTACGTCTGTGTGTaGGGCAGCAGGGAGGCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: KVRVCVGHGCKIHSEAGPVYVCV*GSREAP Trigger: AGGGGCCTCCCTGCTGCCCAACACACAGACGTACAC...CGGCCCGGCTTCGGAATGGATTTTGCAGCCATGCCCCACACACACCCTGACTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR CCA 72 bp | AGGAGTTTGTGTAGAGAACCCAAGGGTGGGGCTTGTTaGGGACCCAGGGAGAAGTGGTGGGACCAGCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: RSLCREPKGGAC*GPREKWWDQPG Trigger: GCCAGGCTGGTCCCACCACTTCTCCCTGGGTCCCCAACAAGCCCCACCCTTGGGTTCTCTACACAAACTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR GCA 72 bp | ATCCACCCCTGGGTCTGCTGGAGTGTGCTGGGTGCTTaGTTGCAGGTAGGGAGCACTCTGTCCCTACTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: IHPWVCWSVLGA*LQVGSTLSLLE Trigger: CTCAAGTAGGGACAGAGTGCTCCCTACCTGCAAGCAAGCACCCAGCACACTCCAGCAGACCCAGGGGTGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR GCA 72 bp | GGGCTCAAGGACATGCTGAGCTCAGGGCTGCTGGCCTaGCAGCACTACATGAGACCCTGTGTCAGGAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: GLKDMLSSGLLA*QHYMRPCVRRH Trigger: ATGTCTCCTGACACAGGGTCTCATGTAGTGCTGGCAGGCCAGCAGCCCTGAGCTCAGCATGTCCTTGAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR CCA 72 bp | TCCCTGCAGACCCTCCCCATCCGGATGCTCACCCTGTaGTGTTTATGCAGGTGTATGGGTCTGCCTGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLQTLPIRMLTL*CLCRCMGLPAL Trigger: GAGAGCAGGCAGACCCATACACCTGCATAAACACCACAGGGTGAGCATCCGGATGGGGAGGGTCTGCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR CCA 72 bp | GGTGGGGAGAGAGAGTTGGACGCTCAAATGGGGCCGTaGCCAGACACCAAACGCAGAGGACACCGGAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GGERELDAQMGP*PDTKRRGHRKK Trigger: TTTCTTCCGGTGTCCTCTGCGTTTGGTGTCTGGCCACGGCCCCATTTGAGCGTCCAACTCTCTCTCCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR GCA 72 bp | TCTCTCCTGGGTCACCATCATCCCTTATGCTGCCCCTaGACTTCCCTGAGCACCACGTCTCATTCCCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLLGHHHPLCCP*TSLSTTSHSHG Trigger: CCCATGGGAATGAGACGTGGTGCTCAGGGAAGTGCAGGGGCAGCATAAGGGATGATGGTGACCCAGGAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR GCA 72 bp | TCCAGGTCTCTCCTGGGTCACCATCATCCCTTATGCTaGCCCTGCACTTCCCTGAGCACCACGTCTCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: SRSLLGHHHPLC*PCTSLSTTSHS Trigger: GGAATGAGACGTGGTGCTCAGGGAAGTGCAGGGGCAGCATAAGGGATGATGGTGACCCAGGAGAGACCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR GCA 72 bp | ACCTCCAGGTCTCTCCTGGGTCACCATCATCCCTTATaGTGCCCCTGCACTTCCCTGAGCACCACGTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TSRSLLGHHHPL*CPCTSLSTTSH Trigger: ATGAGACGTGGTGCTCAGGGAAGTGCAGGGGCAGCATAAGGGATGATGGTGACCCAGGAGAGACCTGGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR CCA 72 bp | CCCTGCTTAGAATCCTCCAGTGAGGGGCTGGGGGCATaGCTCAATGCAGGCTTAGTATGCAGAAGTGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PCLESSSEGLGA*LNAGLVCRSAR Trigger: CCTGGCACTTCTGCATACTAAGCCTGCATTGAGCCATGCCCCCAGCCCCTCACTGGAGGATTCTAAGCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR TCA 72 bp | GTGTTGTGGGGAGTGAGAGCCCCCTCCAGCCCACGGTaGTGCCAAAGTAGAACGAGGTATCGTGTGTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VLWGVRAPSSPR*CQSRTRYRVFG Trigger: TCCAAACACACGATACCTCGTTCTACTTTGGCATCACCGTGGGCTGGAGGGGGCTCTCACTCCCCACAACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR CCA 72 bp | GTCCCCAAGGTCCAAGTGCATGTCCTTCCTTTCCTGTaGCCATGTTTGCTTATGTGCACGTGCGTGCGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: VPKVQVHVLPFL*PCLLMCTCVRA Trigger: CGCACGCACGCACGTGCACATAAGCAAACATGGCCACAGGAAAGGAAGGACATGCACTTGGACCTTGGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR CCA 72 bp | AGAAGTGGTGGGACCAGCCTGGCTGGAGGAAGTAACTaGGCCAGGGTCTTAAGTAGGAACACCTTGTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RSGGTSLAGGSN*ARVLSRNTLSG Trigger: CCCAGACAAGGTGTTCCTACTTAAGACCCTGGCCCAGTTACTTCCTCCAGCCAGGCTGGTCCCACCACTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCCACGGTGATGCCAAAGTAGAACGAGGTATCGTGTGTTTGGATGCATGGACGCTGAGTAGGGCACCATaGTGTCCCCTAAGCCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: AHGDAKVERGIVCLDAWTLSRAP*CPLSHP Trigger: GGGATGGCTTAGGGGACACAATGGTGCCCTACTCAG...CGTCCATGCATCCAAACACACGATACCTCGTTCTACTTTGGCATCACCGTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR TCA 72 bp | CACTTCCCTGAGCACCACGTCTCATTCCCATGGGGCTaGGACGAGGAACATCAGTGGCTGGATTGTTATAGC | + |
|
Preference number: 3 (lower is better) Translates to: HFPEHHVSFPWG*DEEHQWLDCYS Trigger: GCTATAACAATCCAGCCACTGATGTTCCTCGTCTCAGCCCCATGGGAATGAGACGTGGTGCTCAGGGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR GCA 72 bp | CATGTCCTTCCTTTCCTGTGGCCATGTTTGCTTATGTaGACGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HVLPFLWPCLLM*TCVRACVCVCV Trigger: CACACACACACACACACACGCACGCACGCACGTGCACATAAGCAAACATGGCCACAGGAAAGGAAGGACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR GCA 72 bp | TCCAAGTGCATGTCCTTCCTTTCCTGTGGCCATGTTTaGTTATGTGCACGTGCGTGCGTGCGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SKCMSFLSCGHV*LCARACVRVCV Trigger: CACACACACACGCACGCACGCACGTGCACATAAGCAAACATGGCCACAGGAAAGGAAGGACATGCACTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR CCA 72 bp | CCATGTCAAGCTCTGTCAGGTGTCCACAAGGAGTCTTaGGGATGTGACCCTGATGGAGAAGGAGGACAACTG | + |
|
Preference number: 3 (lower is better) Translates to: PCQALSGVHKES*GCDPDGEGGQL Trigger: CAGTTGTCCTCCTTCTCCATCAGGGTCACATCCCCAAGACTCCTTGTGGACACCTGACAGAGCTTGACATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR TCA 72 bp | AAAGCCATCACCATGAACCAAACCAAGACGAGAGAGTaGACAAGCCCCAGCCTGAGGTGGGGAAAGCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KAITMNQTKTRE*TSPSLRWGKQG Trigger: TCCTTGCTTTCCCCACCTCAGGCTGGGGCTTGTTCACTCTCTCGTCTTGGTTTGGTTCATGGTGATGGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR TCA 72 bp | AAAGAAGAACCGTGGAAAGCAACAGCCAGCCCTCCATaGTCCTTCCAAAGCTGCTCCCTCGAGACATTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KEEPWKATASPP*SFQSCSLETLA Trigger: AGCCAATGTCTCGAGGGAGCAGCTTTGGAAGGATCATGGAGGGCTGGCTGTTGCTTTCCACGGTTCTTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR GCA 72 bp | CACCCTGTGGTGTTTATGCAGGTGTATGGGTCTGCCTaGTCTCGAGATTGCGCACACTCTCTCTCTTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HPVVFMQVYGSA*SRDCAHSLSFP Trigger: AGGAAAAGAGAGAGAGTGTGCGCAATCTCGAGAGCAGGCAGACCCATACACCTGCATAAACACCACAGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR GCA 72 bp | TGCTCACCCTGTGGTGTTTATGCAGGTGTATGGGTCTaGCTGCTCTCGAGATTGCGCACACTCTCTCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CSPCGVYAGVWV*LLSRLRTLSLF Trigger: AAAGAGAGAGAGTGTGCGCAATCTCGAGAGCAGGCAGACCCATACACCTGCATAAACACCACAGGGTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGCACATGCCTTTAATCACAGCACTCTTGAGGCAGGTGGATCTCCGTGAGTTCCAAGGTTCACAGCAATaGTGGAGAGGCAAGGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: MHMPLITALLRQVDLREFQGSQQ*WRGKGV Trigger: GACTCCCTTGCCTCTCCACAATTGCTGTGAACCTTG...GAACTCACGGAGATCCACCTGCCTCAAGAGTGCTGTGATTAAAGGCATGTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR TCA 72 bp | CTTCCACGGAATTTGAGGAAAGCCAACAATGGTAGCTaGTGTTTGGGGCTCAGGAAATGGCTATCGAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LPRNLRKANNGS*CLGLRKWLSSP Trigger: GGGGCTCGATAGCCATTTCCTGAGCCCCAAACATCAGCTACCATTGTTGGCTTTCCTCAAATTCCGTGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR TCA 72 bp | TTTAATCACAGCACTCTTGAGGCAGGTGGATCTCCGTaGGTTCCAAGCCAGCCTGGTCTACAGAGTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FNHSTLEAGGSP*VPSQPGLQSEF Trigger: GAACTCACTCTGTAGACCAGGCTGGCTTGGAACTCACGGAGATCCACCTGCCTCAAGAGTGCTGTGATTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR CCA 72 bp | CTTCCAAAGGGCATAGGATCAATTCCCAGCAAGCCATaGCAGGTTGCATCTGTCTTTAACTCCAGTCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LPKGIGSIPSKP*QVASVFNSSPG Trigger: CCCTGGACTGGAGTTAAAGACAGATGCAACCTGCCATGGCTTGCTGGGAATTGATCCTATGCCCTTTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGTCTACAGAGTGAGTTCCAGGACACCAGGCTATACAGTGAAGCCCTGTCTAGTCTTCCACGGAATTaGAGGAAAGCCAACAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: PGLQSEFQDTRLYSEALSSLPRN*RKANNG Trigger: ACCATTGTTGGCTTTCCTCAAATTCCGTGGAAGACT...AGACAGGGCTTCACTGTATAGCCTGGTGTCCTGGAACTCACTCTGTAGACCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR GCA 72 bp | TTGTGGACAAGCAGCCAACGTCTGTATCTCTGTTTATaGAGCGCCAAGGGTCTGTCTGTGTCTCTGTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LWTSSQRLYLCL*SAKGLSVSLFS Trigger: AGAGAACAGAGACACAGACAGACCCTTGGCGCTGCATAAACAGAGATACAGACGTTGGCTGCTTGTCCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCCACGGTGATGCCAAAGTAGAACGAGGTATCGTGTGTTTGGATGCATGGACGGTGACCTATTTGGTTTaGCATTTTGAGACAGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: AHGDAKVERGIVCLDAWTVTYLV*HFETGS Trigger: AGACCCTGTCTCAAAATGCAAAACCAAATAGGTCAC...CGTCCATGCATCCAAACACACGATACCTCGTTCTACTTTGGCATCACCGTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR TCA 72 bp | CAGCCTGTGGCTTCTGTTGGAACTTGCATAAAAGAATaGAAAGTCAGGGTGTGTGTGGGGCATGGCTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: QPVASVGTCIKE*KVRVCVGHGCK Trigger: TTTGCAGCCATGCCCCACACACACCCTGACTTTTCATTCTTTTATGCAAGTTCCAACAGAAGCCACAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR TCA 72 bp | ACACATCAACACGGAACCTTTCACAGAGCAGGGTTGTaGGTGAAGCTAGGAAGAGCTCAAGGTTCACAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: THQHGTFHRAGL*VKLGRAQGSQQ Trigger: TTGCTGTGAACCTTGAGCTCTTCCTAGCTTCACTCACAACCCTGCTCTGTGAAAGGTTCCGTGTTGATGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR CCA 72 bp | TCTCACTGGGGACTGGCGTCCAGACTTACATCCAAATaGATCTGTCACAGTGCATTTCACACATCACATGGT | + |
|
Preference number: 3 (lower is better) Translates to: SHWGLASRLTSK*ICHSAFHTSHG Trigger: ACCATGTGATGTGTGAAATGCACTGTGACAGATCCATTTGGATGTAAGTCTGGACGCCAGTCCCCAGTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR CCA 72 bp | CATTCCCATGGGGCTGAGACGAGGAACATCAGTGGCTaGATTGTTATAGCCACCTTTTATTATGTGCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HSHGAETRNISG*IVIATFYYVPS Trigger: GCTTGGCACATAATAAAAGGTGGCTATAACAATCCAGCCACTGATGTTCCTCGTCTCAGCCCCATGGGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGTCTACAGAGTGAGTTCCAGGACACCAGGCTATACAGTGAAGCCCTGTCTTCAGGTAACACTTGGTaGGTTGTGTCTAAATCAATT | + |
|
Preference number: 3 (lower is better) Translates to: PGLQSEFQDTRLYSEALSSGNTW*VVSKSI Trigger: AATTGATTTAGACACAACCAACCAAGTGTTACCTGA...AGACAGGGCTTCACTGTATAGCCTGGTGTCCTGGAACTCACTCTGTAGACCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR GCA 72 bp | TCTATGTGTTGTGTATCTGTGTCCCCAAGGTCCAAGTaGATGTCCTTCCTTTCCTGTGGCCATGTTTGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SMCCVSVSPRSK*MSFLSCGHVCL Trigger: TAAGCAAACATGGCCACAGGAAAGGAAGGACATGCACTTGGACCTTGGGGACACAGATACACAACACATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR GCA 72 bp | TACATGAGACCCTGTGTCAGGAGACATAGAGAGGGCTaGTGTGTGCTCTTAGTGTTTATTCAAAAGGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: YMRPCVRRHREG*CVLLVFIQKAL Trigger: CAAGGCCTTTTGAATAAACACTAAGAGCACACAGCAGCCCTCTCTATGTCTCCTGACACAGGGTCTCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR-3UTR CAA 90 bp | ATATCCTGGCCTCAAACCCAGCTTTTGATATTCAACATGTTCCCAACAGCTTGTGCAAGCCATGGCAGGTaGCATCTGTCTTTAACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ISWPQTQLLIFNMFPTACASHGR*HLSLTP Trigger: TGGAGTTAAAGACAGATGCAACCTGCCATGGCTTGC...ACAAGCTGTTGGGAACATGTTGAATATCAAAAGCTGGGTTTGAGGCCAGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR TCA 72 bp | TGGACCATGCTATATCCTGGCCTCAAACCCAGCTTTTaGTATTCAACATGTTCCCAACAGCTTGTGACACAT | + |
|
Preference number: 3 (lower is better) Translates to: WTMLYPGLKPSF*YSTCSQQLVTH Trigger: ATGTGTCACAAGCTGTTGGGAACATGTTGAATATCAAAAGCTGGGTTTGAGGCCAGGATATAGCATGGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR CCA 72 bp | TCTGTCACAGTGCATTTCACACATCACATGGTTTTGTaGACAAGCAGCCAACGTCTGTATCTCTGTTTATGC | + |
|
Preference number: 3 (lower is better) Translates to: SVTVHFTHHMVL*TSSQRLYLCLC Trigger: GCATAAACAGAGATACAGACGTTGGCTGCTTGTCCACAAAACCATGTGATGTGTGAAATGCACTGTGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR CCA 72 bp | CAAATGGATCTGTCACAGTGCATTTCACACATCACATaGTTTTGTGGACAAGCAGCCAACGTCTGTATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QMDLSQCISHIT*FCGQAANVCIS Trigger: AGAGATACAGACGTTGGCTGCTTGTCCACAAAACCATGTGATGTGTGAAATGCACTGTGACAGATCCATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR TCA 72 bp | ACTCACTATGTAGCCAAGGCTAGTCTTGATCTGATCTaGCTCTACCATTTGAGCACTAGAATGAATGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: THYVAKASLDLI*LYHLSTRMNEV Trigger: GACCTCATTCATTCTAGTGCTCAAATGGTAGAGTCAGATCAGATCAAGACTAGCCTTGGCTACATAGTGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR TCA 72 bp | AAGAAAAGGAACAGCTCCCTTCAACCTGCAAACTCATaGAGGAACAGAAATATACACAAAGGTCCTTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: KKRNSSLQPANS*RNRNIHKGPYR Trigger: CCTGTAAGGACCTTTGTGTATATTTCTGTTCCTTCATGAGTTTGCAGGTTGAAGGGAGCTGTTCCTTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR TCA 72 bp | AGGTTGCATCTGTCTTTAACTCCAGTCCAGGGATTCTaGCACTTTACACAGACATACATGCAGATAAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: RLHLSLTPVQGF*HFTQTYMQIKH Trigger: ATGTTTTATCTGCATGTATGTCTGTGTAAAGTGTCAGAATCCCTGGACTGGAGTTAAAGACAGATGCAACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR TCA 72 bp | ATAAATAAATTAGGCATAACCACATCTCAGCAAAACTaGAAGAAAAGGAACAGCTCCCTTCAACCTGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: INKLGITTSQQN*KKRNSSLQPAN Trigger: GTTTGCAGGTTGAAGGGAGCTGTTCCTTTTCTTTCAGTTTTGCTGAGATGTGGTTATGCCTAATTTATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR TCA 72 bp | TTCTTTTATATCACCTCCAACATAGACTGTCATGTTTaGAACTTTCCCAATCAACAGGATGAAGGAAGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: FFYITSNIDCHV*NFPNQQDEGRV Trigger: AACCCTTCCTTCATCCTGTTGATTGGGAAAGTTTCAAACATGACAGTCTATGTTGGAGGTGATATAAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR TCA 90 bp | AGGGGAAGAAGGGGCTGGACCCTCCTGGAGGTGAGGAGTCCCTGTCCTGCTGGGGCTGCTTGCTGGTCTTaGAGGACACCTGCAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: RGRRGWTLLEVRSPCPAGAACWS*RTPAAR Trigger: GCGTGCTGCAGGTGTCCTTCAAGACCAGCAAGCAGC...CCCAGCAGGACAGGGACTCCTCACCTCCAGGAGGGTCCAGCCCCTTCTTCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR TCA 90 bp | AGGGGAAGAAGGGGCTGGACCCTCCTGGAGGTGAGGAGTCCCTGTCCTGCTGGGTCTTGGGGAGGCCACTaGCATACAGGTTGGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGRRGWTLLEVRSPCPAGSWGGH*HTGWHP Trigger: GGGATGCCAACCTGTATGTCAGTGGCCTCCCCAAGA...CCCAGCAGGACAGGGACTCCTCACCTCCAGGAGGGTCCAGCCCCTTCTTCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR GCA 90 bp | ACCTGTGATGCTGGCCCTATGGACTCTCAGCCCTCAGCCCTGCTCCCTACACCCGTCTTGAAGGACACCTaGAGCACGCGCTCGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TCDAGPMDSQPSALLPTPVLKDT*STRSPR Trigger: CCTGGGCGAGCGCGTGCTGCAGGTGTCCTTCAAGAC...GGGTGTAGGGAGCAGGGCTGAGGGCTGAGAGTCCATAGGGCCAGCATCACAGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR TCA 90 bp | GGGCTGGGGGCATGGCTCAATGCAGGCTTAGTATGCAGAAGTGCCAGGGTCCTGACTGGTACAGGTGGGTaGGCAGGGCCTGCCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGAWLNAGLVCRSARVLTGTGG*AGPALS Trigger: AGACAGGGCAGGCCCTGCTCACCCACCTGTACCAGT...CAGGACCCTGGCACTTCTGCATACTAAGCCTGCATTGAGCCATGCCCCCAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGAGAACAGGGTGGGGACACCCTTCCCTCAATTCCCTGCAGACCCTCCCCACTGCCAGGCCACTCATaGCATCGATGGCGATTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGEQGGDTLPSIPCRPSPLPGHS*HRWRLG Trigger: CCCCAATCGCCATCGATGGCATGAGTGGCCTGGCAG...TGGGGAGGGTCTGCAGGGAATTGAGGGAAGGGTGTCCCCACCCTGTTCTCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR GCA 90 bp | AAAGTCAGGGTGTGTGTGGGGCATGGCTGCAAAATCCATTCCGAAGCCGGGCCGGGACAAGCCCACGCCTaGCAGGCCACTCATGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KVRVCVGHGCKIHSEAGPGQAHA*QATHAI Trigger: GATGGCATGAGTGGCCTGGCAGGCGTGGGCTTGTCC...CGGCCCGGCTTCGGAATGGATTTTGCAGCCATGCCCCACACACACCCTGACTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR GCA 90 bp | AGCACTCTGTCCCTACTTGAGGGAGGAGGACTGCAGACCTCTCCCCAGACCCAGGGTTGTACACGAAGATaGACCAGCCAGCGCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: STLSLLEGGGLQTSPQTQGCTRR*TSQRLQ Trigger: CTGCAGGCGCTGGCTGGTGCATCTTCGTGTACAACC...CTGGGTCTGGGGAGAGGTCTGCAGTCCTCCTCCCTCAAGTAGGGACAGAGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTTCAGGAAAGCTGGACAAGTGTCCTACCAACTGAGCTACCTCCCCAGCATTTGTCCCAAGGAGTaGCCCGTTGGGCAGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGFRKAGQVSYQLSYLPSICPKE*PVGQGR Trigger: CCGGCCCTGCCCAACGGGCCACTCCTTGGGACAAAT...GCTGGGGAGGTAGCTCAGTTGGTAGGACACTTGTCCAGCTTTCCTGAAGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGCATTCCCACTGACTCCCTCACCGTCAGAACTAAGTCACTCAGCGTGGGGATTTGTCCCAAGGAGTaGCCCGTTGGGCAGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSIPTDSLTVRTKSLSVGICPKE*PVGQGR Trigger: CCGGCCCTGCCCAACGGGCCACTCCTTGGGACAAAT...CCCCACGCTGAGTGACTTAGTTCTGACGGTGAGGGAGTCAGTGGGAATGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR CCA 90 bp | GCACTCTTGAGGCAGGTGGATCTCCGTGAGTTCCAAGCCAGCCTGGTCTACAGAGAGGACTGGTACAGGTaGGTGAGCAGGGCCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLRQVDLREFQASLVYREDWYR*VSRACP Trigger: AGGGCAGGCCCTGCTCACCCACCTGTACCAGTCCTC...TCTGTAGACCAGGCTGGCTTGGAACTCACGGAGATCCACCTGCCTCAAGAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTTCAGGAAAGCTGGACAAGTGTCCTACCAACTGAGCTACCTCCCCAGCCGCCTGGCAGAGGACTaGTACAGGTGGGTGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGFRKAGQVSYQLSYLPSRLAED*YRWVSR Trigger: CCTGCTCACCCACCTGTACCAGTCCTCTGCCAGGCG...GCTGGGGAGGTAGCTCAGTTGGTAGGACACTTGTCCAGCTTTCCTGAAGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR CCA 90 bp | GCACTCTTGAGGCAGGTGGATCTCCGTGAGTTCCAAGCCAGCCTGGTCTACAGACGCCTGGCAGAGGACTaGTACAGGTGGGTGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLRQVDLREFQASLVYRRLAED*YRWVSR Trigger: CCTGCTCACCCACCTGTACCAGTCCTCTGCCAGGCG...TCTGTAGACCAGGCTGGCTTGGAACTCACGGAGATCCACCTGCCTCAAGAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGATGCTGGCCCTATGGACTCTCAGCCCTCAGCCCTGCTCCCTACACCCCACTCATGCCATCGATaGCGATTGGGGAGAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TCDAGPMDSQPSALLPTPHSCHR*RLGRTW Trigger: CCAGGTTCTCCCCAATCGCCATCGATGGCATGAGTG...GGGTGTAGGGAGCAGGGCTGAGGGCTGAGAGTCCATAGGGCCAGCATCACAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR CAA 72 bp | TTGGATGCATGGACGCCATGTGTGTACGTCTGTGTGTaGGGCAGCAGGGAGGCCCCTGGTGGGCTAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LDAWTPCVYVCV*GSREAPGGLRS Trigger: ACTCCTTAGCCCACCAGGGGCCTCCCTGCTGCCCAACACACAGACGTACACACATGGCGTCCATGCATCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR GCA 90 bp | ACCTGTGATGCTGGCCCTATGGACTCTCAGCCCTCAGCCCTGCTCCCTACACCCAAGGGTCCGAAAAGCTaGCACAGCACGCTCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TCDAGPMDSQPSALLPTPKGPKS*HSTLSS Trigger: TGATGAGAGCGTGCTGTGGCAGCTTTTCGGACCCTT...GGGTGTAGGGAGCAGGGCTGAGGGCTGAGAGTCCATAGGGCCAGCATCACAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGTACCTGTGATGCTGGCCCTATGGACTCTCAGCCCTCAGCCCTGCTCCCTTGCTCCATCTCCTTCTaGCTCATGGTCTTGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCTCDAGPMDSQPSALLPCSISF*LMVLGR Trigger: CCTCCCCAAGACCATGAGCCAGAAGGAGATGGAGCA...AGGGAGCAGGGCTGAGGGCTGAGAGTCCATAGGGCCAGCATCACAGGTACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR CCA 90 bp | AGAATGAATGAGGTCTGTGTGCCACACCAGGCTTGTGCAGTGCTGGGGAAGAGCGAGGACTGGTACAGGTaGGTGAGCAGGGCCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RMNEVCVPHQACAVLGKSEDWYR*VSRACP Trigger: AGGGCAGGCCCTGCTCACCCACCTGTACCAGTCCTC...GCTCTTCCCCAGCACTGCACAAGCCTGGTGTGGCACACAGACCTCATTCATTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR TCA 90 bp | CAAGGAGAACAGGGTGGGGACACCCTTCCCTCAATTCCCTGCAGACCCTCCCCATCTTGTCAAAGCGGATaGATCCCACACCCCGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGEQGGDTLPSIPCRPSPSCQSG*IPHPER Trigger: TCTCTCGGGGTGTGGGATTCATCCGCTTTGACAAGA...TGGGGAGGGTCTGCAGGGAATTGAGGGAAGGGTGTCCCCACCCTGTTCTCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGAGAACAGGGTGGGGACACCCTTCCCTCAATTCCCTGCAGACCCTCCCCAATGATTCGGCCGTACTaGGAGAAGAGCTGCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QGEQGGDTLPSIPCRPSPMIRPY*EKSCSI Trigger: GATGGAGCAGCTCTTCTCCCAGTACGGCCGAATCAT...TGGGGAGGGTCTGCAGGGAATTGAGGGAAGGGTGTCCCCACCCTGTTCTCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR CCA 90 bp | CAATTCCCTGCAGACCCTCCCCATCCGGATGCTCACCCTGTGGTGTTTATGCAGGCCATCGATGGCGATTaGGGAGAACCTGGCGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QFPADPPHPDAHPVVFMQAIDGD*GEPGDE Trigger: CTCATCGCCAGGTTCTCCCCAATCGCCATCGATGGC...CTGCATAAACACCACAGGGTGAGCATCCGGATGGGGAGGGTCTGCAGGGAATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR TCA 90 bp | GGAAAGCAACAGCCAGCCCTCCATGATCCTTCCAAAGCTGCTCCCTCGAGACATTCTTGGGGAGGCCACTaGCATACAGGTTGGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: GKQQPALHDPSKAAPSRHSWGGH*HTGWHP Trigger: GGGATGCCAACCTGTATGTCAGTGGCCTCCCCAAGA...ATGTCTCGAGGGAGCAGCTTTGGAAGGATCATGGAGGGCTGGCTGTTGCTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGAGAACAGGGTGGGGACACCCTTCCCTCAATTCCCTGCAGACCCTCCCCATCTTGCTGTCGTCAGTaGCTCCATTTGTCCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGEQGGDTLPSIPCRPSPSCCRQ*LHLSQG Trigger: TCCTTGGGACAAATGGAGCCACTGACGACAGCAAGA...TGGGGAGGGTCTGCAGGGAATTGAGGGAAGGGTGTCCCCACCCTGTTCTCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR CCA 90 bp | CTGGGGGCATGGCTCAATGCAGGCTTAGTATGCAGAAGTGCCAGGGTCCTGTTCGAGACACCTGTGGCCTaGTCCAGCAGGATTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGAWLNAGLVCRSARVLFETPVA*SSRILE Trigger: TTCCAGAATCCTGCTGGACCAGGCCACAGGTGTCTC...GAACAGGACCCTGGCACTTCTGCATACTAAGCCTGCATTGAGCCATGCCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR CCA 90 bp | AGCACTCTGTCCCTACTTGAGGGAGGAGGACTGCAGACCTCTCCCCAGACCCAGGCTCTCATCAGCTTCTaGGGACAGGTTGTACACGAA | + |
|
Preference number: 4 (lower is better) Translates to: STLSLLEGGGLQTSPQTQALISF*GQVVHE Trigger: TTCGTGTACAACCTGTCCCCAGAAGCTGATGAGAGC...CTGGGTCTGGGGAGAGGTCTGCAGTCCTCCTCCCTCAAGTAGGGACAGAGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR TCA 90 bp | GCACTCTTGAGGCAGGTGGATCTCCGTGAGTTCCAAGCCAGCCTGGTCTACAGATCTTGTCAAAGCGGATaGATCCCACACCCCGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALLRQVDLREFQASLVYRSCQSG*IPHPER Trigger: TCTCTCGGGGTGTGGGATTCATCCGCTTTGACAAGA...TCTGTAGACCAGGCTGGCTTGGAACTCACGGAGATCCACCTGCCTCAAGAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR TCA 90 bp | AGAATGAATGAGGTCTGTGTGCCACACCAGGCTTGTGCAGTGCTGGGGAAGAGCGCCTGCCCTGTCTTCTaGCTTGGGTTGTTTGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RMNEVCVPHQACAVLGKSACPVF*LGLFAN Trigger: GTTCGCAAACAACCCAAGTCAGAAGACAGGGCAGGC...GCTCTTCCCCAGCACTGCACAAGCCTGGTGTGGCACACAGACCTCATTCATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR CCA 90 bp | CTGTTCCTGCTGCTAGGTGACCTCCAGGTCTCTCCTGGGTCACCATCATCCCTTATGATTCGGCCGTACTaGGAGAAGAGCTGCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LFLLLGDLQVSPGSPSSLMIRPY*EKSCSI Trigger: GATGGAGCAGCTCTTCTCCCAGTACGGCCGAATCAT...AAGGGATGATGGTGACCCAGGAGAGACCTGGAGGTCACCTAGCAGCAGGAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| CDS-3UTR CCA 90 bp | AGAATGAATGAGGTCTGTGTGCCACACCAGGCTTGTGCAGTGCTGGGGAAGAGCGAGACACCTGTGGCCTaGTCCAGCAGGATTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RMNEVCVPHQACAVLGKSETPVA*SSRILE Trigger: TTCCAGAATCCTGCTGGACCAGGCCACAGGTGTCTC...GCTCTTCCCCAGCACTGCACAAGCCTGGTGTGGCACACAGACCTCATTCATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGTACCTGTGATGCTGGCCCTATGGACTCTCAGCCCTCAGCCCTGCTCCCTGTTGATGGCTTTGTCTaGATCATTGGGGTCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VCTCDAGPMDSQPSALLPVDGFV*IIGVRV Trigger: TACTCTGACCCCAATGATGCAGACAAAGCCATCAAC...AGGGAGCAGGGCTGAGGGCTGAGAGTCCATAGGGCCAGCATCACAGGTACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR GCA 90 bp | GCACTCTTGAGGCAGGTGGATCTCCGTGAGTTCCAAGCCAGCCTGGTCTACAGATATCCCGAACCAACTTaGAGGATTCAATGTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ALLRQVDLREFQASLVYRYPEPT*RIQCPR Trigger: TCGGGGACATTGAATCCTGCAAGTTGGTTCGGGATA...TCTGTAGACCAGGCTGGCTTGGAACTCACGGAGATCCACCTGCCTCAAGAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR GCA 90 bp | CAATTCCCTGCAGACCCTCCCCATCCGGATGCTCACCCTGTGGTGTTTATGCAGTTGATGGTCTTGGTCTaGAGTTTGAGGCCATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QFPADPPHPDAHPVVFMQLMVLV*SLRPLR Trigger: CCTCAATGGCCTCAAACTGCAGACCAAGACCATCAA...CTGCATAAACACCACAGGGTGAGCATCCGGATGGGGAGGGTCTGCAGGGAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR GCA 90 bp | GGAAAGCAACAGCCAGCCCTCCATGATCCTTCCAAAGCTGCTCCCTCGAGACATCTTGATGGCCTCCTCTaGCTCGATCCTCTTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GKQQPALHDPSKAAPSRHLDGLL*LDPLVK Trigger: TTTGACAAGAGGATCGAGGCAGAGGAGGCCATCAAG...ATGTCTCGAGGGAGCAGCTTTGGAAGGATCATGGAGGGCTGGCTGTTGCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR TCA 90 bp | ACATCACATGGTTTTGTGGACAAGCAGCCAACGTCTGTATCTCTGTTTATGCAGACTGGTACAGGTGGGTaGGCAGGGCCTGCCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSHGFVDKQPTSVSLFMQTGTGG*AGPALS Trigger: AGACAGGGCAGGCCCTGCTCACCCACCTGTACCAGT...CTGCATAAACAGAGATACAGACGTTGGCTGCTTGTCCACAAAACCATGTGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR GCA 90 bp | AGAATGAATGAGGTCTGTGTGCCACACCAGGCTTGTGCAGTGCTGGGGAAGAGCTATCCCGAACCAACTTaGAGGATTCAATGTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RMNEVCVPHQACAVLGKSYPEPT*RIQCPR Trigger: TCGGGGACATTGAATCCTGCAAGTTGGTTCGGGATA...GCTCTTCCCCAGCACTGCACAAGCCTGGTGTGGCACACAGACCTCATTCATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGCCCACGGTGATGCCAAAGTAGAACGAGGTATCGTGTGTTTGGATGCACTTGATGGCCTCCTCTaGCTCGATCCTCTTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PPAHGDAKVERGIVCLDALDGLL*LDPLVK Trigger: TTTGACAAGAGGATCGAGGCAGAGGAGGCCATCAAG...TGCATCCAAACACACGATACCTCGTTCTACTTTGGCATCACCGTGGGCTGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR GCA 90 bp | GCCCACGGTGATGCCAAAGTAGAACGAGGTATCGTGTGTTTGGATGCATGGACGCTGACTTGGGTTGTTTaGGAACTTGACCGTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: AHGDAKVERGIVCLDAWTLTWVV*ELDRDG Trigger: CCCATCACGGTCAAGTTCGCAAACAACCCAAGTCAG...CGTCCATGCATCCAAACACACGATACCTCGTTCTACTTTGGCATCACCGTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR GCA 90 bp | GGGGAGATGACTCTCAAAGTCTGGACCCCACATAACCTGACCACATGGGACTCACTGACTTGGGTTGTTTaGGAACTTGACCGTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GEMTLKVWTPHNLTTWDSLTWVV*ELDRDG Trigger: CCCATCACGGTCAAGTTCGCAAACAACCCAAGTCAG...TGAGTCCCATGTGGTCAGGTTATGTGGGGTCCAGACTTTGAGAGTCATCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR CAA 72 bp | CACGGTGATGCCAAAGTAGAACGAGGTATCGTGTGTTaGGATGCATGGACGCCATGTGTGTACGTCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HGDAKVERGIVC*DAWTPCVYVCV Trigger: CACACAGACGTACACACATGGCGTCCATGCATCCAAACACACGATACCTCGTTCTACTTTGGCATCACCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR CAA 72 bp | TCTAAGTCCATGCACATGCCTTTAATCACAGCACTCTaGAGGCAGGTGGATCTCCGTGAGTTCCAAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKSMHMPLITAL*RQVDLREFQAS Trigger: GCTGGCTTGGAACTCACGGAGATCCACCTGCCTCAAGAGTGCTGTGATTAAAGGCATGTGCATGGACTTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR CCA 90 bp | CAATTCCCAGCAAGCCATGGCAGGTTGCATCTGTCTTTAACTCCAGTCCAGGGACCCTGTCTTCTGACTTaGGTTGTTTGCGAACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QFPASHGRLHLSLTPVQGPCLLT*VVCELD Trigger: GTCAAGTTCGCAAACAACCCAAGTCAGAAGACAGGG...TCCCTGGACTGGAGTTAAAGACAGATGCAACCTGCCATGGCTTGCTGGGAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR CCA 90 bp | ATATCCTGGCCTCAAACCCAGCTTTTGATATTCAACATGTTCCCAACAGCTTGTTCTTGCTGTCGTCAGTaGCTCCATTTGTCCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISWPQTQLLIFNMFPTACSCCRQ*LHLSQG Trigger: TCCTTGGGACAAATGGAGCCACTGACGACAGCAAGA...ACAAGCTGTTGGGAACATGTTGAATATCAAAAGCTGGGTTTGAGGCCAGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR CCA 90 bp | ACATCACATGGTTTTGTGGACAAGCAGCCAACGTCTGTATCTCTGTTTATGCAGCCCTGTCTTCTGACTTaGGTTGTTTGCGAACTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSHGFVDKQPTSVSLFMQPCLLT*VVCELD Trigger: GTCAAGTTCGCAAACAACCCAAGTCAGAAGACAGGG...CTGCATAAACAGAGATACAGACGTTGGCTGCTTGTCCACAAAACCATGTGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| 3UTR CAA 72 bp | CTGGACCATGCTATATCCTGGCCTCAAACCCAGCTTTaGATATTCAACATGTTCCCAACAGCTTGTGACACA | + |
|
Preference number: 4 (lower is better) Translates to: LDHAISWPQTQL*IFNMFPTACDT Trigger: TGTGTCACAAGCTGTTGGGAACATGTTGAATATCAAAAGCTGGGTTTGAGGCCAGGATATAGCATGGTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR GCA 90 bp | ATATCCTGGCCTCAAACCCAGCTTTTGATATTCAACATGTTCCCAACAGCTTGTGTTGATGGCTTTGTCTaGATCATTGGGGTCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISWPQTQLLIFNMFPTACVDGFV*IIGVRV Trigger: TACTCTGACCCCAATGATGCAGACAAAGCCATCAAC...ACAAGCTGTTGGGAACATGTTGAATATCAAAAGCTGGGTTTGAGGCCAGGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| 3UTR CAA 72 bp | AACAATAAGTTATCAGTGGCTCTCAGAGGGTTAATGTaGGAACTAGGGACACAAATGCCTATTTTGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NNKLSVALRGLM*ELGTQMPILLR Trigger: TCTCAACAAAATAGGCATTTGTGTCCCTAGTTCCAACATTAACCCTCTGAGAGCCACTGATAACTTATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| CDS-3UTR CAA 90 bp | AGGGGAAGAAGGGGCTGGACCCTCCTGGAGGTGAGGAGTCCCTGTCCTGCTGGGCCACTGACATACAGGTaGGCATCCCGGATAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RGRRGWTLLEVRSPCPAGPLTYR*ASRIEA Trigger: TGCCTCTATCCGGGATGCCAACCTGTATGTCAGTGG...CCCAGCAGGACAGGGACTCCTCACCTCCAGGAGGGTCCAGCCCCTTCTTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGGGGCATGGCTCAATGCAGGCTTAGTATGCAGAAGTGCCAGGGTCCTGCGTCAGTGGCTCCATTaGTCCCAAGGAGTGGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GLGAWLNAGLVCRSARVLRQWLH*SQGVAR Trigger: ACGGGCCACTCCTTGGGACAAATGGAGCCACTGACG...CAGGACCCTGGCACTTCTGCATACTAAGCCTGCATTGAGCCATGCCCCCAGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| CDS-3UTR CAA 90 bp | ACCTGTGATGCTGGCCCTATGGACTCTCAGCCCTCAGCCCTGCTCCCTACACCCTGCTGCTTGCTGGTCTaGAAGGACACCTGCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: TCDAGPMDSQPSALLPTPCCLLV*KDTCST Trigger: CGTGCTGCAGGTGTCCTTCAAGACCAGCAAGCAGCA...GGGTGTAGGGAGCAGGGCTGAGGGCTGAGAGTCCATAGGGCCAGCATCACAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR CAA 90 bp | CCAGGCTTCAGGAAAGCTGGACAAGTGTCCTACCAACTGAGCTACCTCCCCAGCCGTCAGTGGCTCCATTaGTCCCAAGGAGTGGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PGFRKAGQVSYQLSYLPSRQWLH*SQGVAR Trigger: ACGGGCCACTCCTTGGGACAAATGGAGCCACTGACG...GCTGGGGAGGTAGCTCAGTTGGTAGGACACTTGTCCAGCTTTCCTGAAGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| CDS-3UTR CAA 90 bp | ACCTGTGATGCTGGCCCTATGGACTCTCAGCCCTCAGCCCTGCTCCCTACACCCCTGCCGAAGAGACTCTaGAACTCGTCCTGTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: TCDAGPMDSQPSALLPTPLPKRL*NSSCVM Trigger: CATGACACAGGACGAGTTCAAGAGTCTCTTCGGCAG...GGGTGTAGGGAGCAGGGCTGAGGGCTGAGAGTCCATAGGGCCAGCATCACAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| CDS-3UTR CAA 90 bp | CAAGGAGAACAGGGTGGGGACACCCTTCCCTCAATTCCCTGCAGACCCTCCCCATTCTGGCTCATGGTCTaGGGGAGGCCACTGACATAC | + |
|
Preference number: 5 (lower is better) Translates to: QGEQGGDTLPSIPCRPSPFWLMV*GRPLTY Trigger: GTATGTCAGTGGCCTCCCCAAGACCATGAGCCAGAA...TGGGGAGGGTCTGCAGGGAATTGAGGGAAGGGTGTCCCCACCCTGTTCTCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| CDS CCA 90 bp | GTGGCCTGGTCCAGCAGGATTCTGGAAGTGATGATTCGGCCGTACTaGGAGAAGAGCTGCTCCATCTCCTTCTGGCTCATGGTCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VAWSSRILEVMIRPY*EKSCSISFWLMVLG Trigger: CCCCAAGACCATGAGCCAGAAGGAGATGGAGCAGCTCTTCTCCCAGTACGGCCGAATCATCACTTCCAGAATCCTGCTGGACCAGGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003501.9 ENSMUST00000215901.2 |
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| CDS-3UTR CAA 90 bp | ACCTGTGATGCTGGCCCTATGGACTCTCAGCCCTCAGCCCTGCTCCCTACACCCTGCAGTTTGAGGCCATaGAGGGTGTTGATGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TCDAGPMDSQPSALLPTPCSLRP*RVLMAL Trigger: CAAAGCCATCAACACCCTCAATGGCCTCAAACTGCA...GGGTGTAGGGAGCAGGGCTGAGGGCTGAGAGTCCATAGGGCCAGCATCACAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| CDS-3UTR CAA 90 bp | GGGCTGGGGGCATGGCTCAATGCAGGCTTAGTATGCAGAAGTGCCAGGGTCCTGGACACCTTGATGGTCTaGGTCTGCAGTTTGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLGAWLNAGLVCRSARVLDTLMV*VCSLRP Trigger: TGGCCTCAAACTGCAGACCAAGACCATCAAGGTGTC...CAGGACCCTGGCACTTCTGCATACTAAGCCTGCATTGAGCCATGCCCCCAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
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| CDS CCA 90 bp | GTGATGATTCGGCCGTACTGGGAGAAGAGCTGCTCCATCTCCTTCTaGCTCATGGTCTTGGGGAGGCCACTGACATACAGGTTGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: VMIRPYWEKSCSISF*LMVLGRPLTYRLAS Trigger: GGATGCCAACCTGTATGTCAGTGGCCTCCCCAAGACCATGAGCCAGAAGGAGATGGAGCAGCTCTTCTCCCAGTACGGCCGAATCATCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003501.9 ENSMUST00000215901.2 |
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| CDS-3UTR CAA 90 bp | AAAGTCAGGGTGTGTGTGGGGCATGGCTGCAAAATCCATTCCGAAGCCGGGCCGCCGAAACCCTTGCACTaGTTGGTGGTGAAATCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: KVRVCVGHGCKIHSEAGPPKPLH*LVVKSR Trigger: CCGAGATTTCACCACCAACAAGTGCAAGGGTTTCGG...CGGCCCGGCTTCGGAATGGATTTTGCAGCCATGCCCCACACACACCCTGACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| CDS-3UTR CAA 90 bp | CAATTCCCTGCAGACCCTCCCCATCCGGATGCTCACCCTGTGGTGTTTATGCAGGTCTTGGTCTGCAGTTaGAGGCCATTGAGGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QFPADPPHPDAHPVVFMQVLVCS*RPLRVL Trigger: CAACACCCTCAATGGCCTCAAACTGCAGACCAAGAC...CTGCATAAACACCACAGGGTGAGCATCCGGATGGGGAGGGTCTGCAGGGAATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
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| CDS-3UTR CAA 90 bp | CCAGGCTTCAGGAAAGCTGGACAAGTGTCCTACCAACTGAGCTACCTCCCCAGCGACACCTTGATGGTCTaGGTCTGCAGTTTGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGFRKAGQVSYQLSYLPSDTLMV*VCSLRP Trigger: TGGCCTCAAACTGCAGACCAAGACCATCAAGGTGTC...GCTGGGGAGGTAGCTCAGTTGGTAGGACACTTGTCCAGCTTTCCTGAAGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR CAA 90 bp | GGAAAGCAACAGCCAGCCCTCCATGATCCTTCCAAAGCTGCTCCCTCGAGACATTTCTGGCTCATGGTCTaGGGGAGGCCACTGACATAC | + |
|
Preference number: 5 (lower is better) Translates to: GKQQPALHDPSKAAPSRHFWLMV*GRPLTY Trigger: GTATGTCAGTGGCCTCCCCAAGACCATGAGCCAGAA...ATGTCTCGAGGGAGCAGCTTTGGAAGGATCATGGAGGGCTGGCTGTTGCTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGCTTCAGGAAAGCTGGACAAGTGTCCTACCAACTGAGCTACCTCCCCAGCAAATCTCGGATGACCTaGACATTGGTGACCGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGFRKAGQVSYQLSYLPSKSRMT*TLVTAP Trigger: TGGGGCGGTCACCAATGTCAAGGTCATCCGAGATTT...GCTGGGGAGGTAGCTCAGTTGGTAGGACACTTGTCCAGCTTTCCTGAAGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR CAA 90 bp | TGCACTTCCCTGAGCACCACGTCTCATTCCCATGGGGCTGAGACGAGGAACATCAGGCCATTGAGGGTGTaGATGGCTTTGTCTGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: CTSLSTTSHSHGAETRNIRPLRV*MALSAS Trigger: TGATGCAGACAAAGCCATCAACACCCTCAATGGCCT...GATGTTCCTCGTCTCAGCCCCATGGGAATGAGACGTGGTGCTCAGGGAAGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGTCTACAGAGTGAGTTCCAGGACACCAGGCTATACAGTGAAGCCCTGTCTGTCTTGGTCTGCAGTTaGAGGCCATTGAGGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGLQSEFQDTRLYSEALSVLVCS*RPLRVL Trigger: CAACACCCTCAATGGCCTCAAACTGCAGACCAAGAC...AGACAGGGCTTCACTGTATAGCCTGGTGTCCTGGAACTCACTCTGTAGACCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR CAA 90 bp | TACAGGTTCCCATGTCAAGCTCTGTCAGGTGTCCACAAGGAGTCTTGGGGATGTCCACTGACATACAGGTaGGCATCCCGGATAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: YRFPCQALSGVHKESWGCPLTYR*ASRIEA Trigger: TGCCTCTATCCGGGATGCCAACCTGTATGTCAGTGG...ACATCCCCAAGACTCCTTGTGGACACCTGACAGAGCTTGACATGGGAACCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR CAA 90 bp | CAATTCCCAGCAAGCCATGGCAGGTTGCATCTGTCTTTAACTCCAGTCCAGGGACTGCCGAAGAGACTCTaGAACTCGTCCTGTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: QFPASHGRLHLSLTPVQGLPKRL*NSSCVM Trigger: CATGACACAGGACGAGTTCAAGAGTCTCTTCGGCAG...TCCCTGGACTGGAGTTAAAGACAGATGCAACCTGCCATGGCTTGCTGGGAATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS-3UTR CAA 90 bp | ACATCACATGGTTTTGTGGACAAGCAGCCAACGTCTGTATCTCTGTTTATGCAGTTATCCCGAACCAACTaGCAGGATTCAATGTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TSHGFVDKQPTSVSLFMQLSRTN*QDSMSP Trigger: CGGGGACATTGAATCCTGCAAGTTGGTTCGGGATAA...CTGCATAAACAGAGATACAGACGTTGGCTGCTTGTCCACAAAACCATGTGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR CAA 90 bp | ACATCACATGGTTTTGTGGACAAGCAGCCAACGTCTGTATCTCTGTTTATGCAGAGGCCATTGAGGGTGTaGATGGCTTTGTCTGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TSHGFVDKQPTSVSLFMQRPLRV*MALSAS Trigger: TGATGCAGACAAAGCCATCAACACCCTCAATGGCCT...CTGCATAAACAGAGATACAGACGTTGGCTGCTTGTCCACAAAACCATGTGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003501.9 |
||
| CDS-3UTR CAA 90 bp | TGGATTGTTATAGCCACCTTTTATTATGTGCCAAGCACTGTGTTCTATCTCAATTGCAGTTTGAGGCCATaGAGGGTGTTGATGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WIVIATFYYVPSTVFYLNCSLRP*RVLMAL Trigger: CAAAGCCATCAACACCCTCAATGGCCTCAAACTGCA...ATTGAGATAGAACACAGTGCTTGGCACATAATAAAAGGTGGCTATAACAATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215901.2 |
||
| CDS CCA 72 bp | CGGCCGTACTGGGAGAAGAGCTGCTCCATCTCCTTCTaGCTCATGGTCTTGGGGAGGCCACTGACATACAGG | + |
|
Preference number: 6 (lower is better) Translates to: RPYWEKSCSISF*LMVLGRPLTYR Trigger: CCTGTATGTCAGTGGCCTCCCCAAGACCATGAGCCAGAAGGAGATGGAGCAGCTCTTCTCCCAGTACGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003501.9 ENSMUST00000215901.2 |
||
| CDS CCA 72 bp | CGGATGAATCCCACACCCCGAGAGACACCTGTGGCCTaGTCCAGCAGGATTCTGGAAGTGATGATTCGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RMNPTPRETPVA*SSRILEVMIRP Trigger: CGGCCGAATCATCACTTCCAGAATCCTGCTGGACCAGGCCACAGGTGTCTCTCGGGGTGTGGGATTCATCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003501.9 ENSMUST00000215901.2 |
||
| CDS CAA 72 bp | TGGCTCATGGTCTTGGGGAGGCCACTGACATACAGGTaGGCATCCCGGATAGAGGCAGAACTGGGACGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: WLMVLGRPLTYR*ASRIEAELGRA Trigger: TGCACGTCCCAGTTCTGCCTCTATCCGGGATGCCAACCTGTATGTCAGTGGCCTCCCCAAGACCATGAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003501.9 ENSMUST00000215901.2 |
||
| CDS CAA 72 bp | CCCAGGCTCTGCCCTGTGATCTTATCCCGAACCAACTaGCAGGATTCAATGTCCCCGATGCTGCCGAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PRLCPVILSRTN*QDSMSPMLPKR Trigger: TCTCTTCGGCAGCATCGGGGACATTGAATCCTGCAAGTTGGTTCGGGATAAGATCACAGGGCAGAGCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003501.9 ENSMUST00000215901.2 |
||
| CDS GCA 72 bp | CAGGTTGGCATCCCGGATAGAGGCAGAACTGGGACGTaGATAGGACACCTTGATGGTCTTGGTCTGCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: QVGIPDRGRTGT*IGHLDGLGLQF Trigger: AAACTGCAGACCAAGACCATCAAGGTGTCCTATGCACGTCCCAGTTCTGCCTCTATCCGGGATGCCAACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003501.9 ENSMUST00000215901.2 |
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| CDS CCA 72 bp | TCCAGCAGGATTCTGGAAGTGATGATTCGGCCGTACTaGGAGAAGAGCTGCTCCATCTCCTTCTGGCTCATG | + |
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Preference number: 6 (lower is better) Translates to: SSRILEVMIRPY*EKSCSISFWLM Trigger: CATGAGCCAGAAGGAGATGGAGCAGCTCTTCTCCCAGTACGGCCGAATCATCACTTCCAGAATCCTGCTGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003501.9 ENSMUST00000215901.2 |
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