Pregenerated sensors for ELAVL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040028Ensembl transcript IDs: ENSMUST00000098950.6, ENSMUST00000209010.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACCTCTTCCCATCTCCCCTTGTGGGAGCCCCAGAATATGGGCCCTaGTGCTGCTCCCAACACTATAGAGCTGGGACTGAGTGGGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: NLFPSPLVGAPEYGP*CCSQHYRAGTEWAG Trigger: CCCTGCCCACTCAGTCCCAGCTCTATAGTGTTGGGAGCAGCAGCAGGGCCCATATTCTGGGGCTCCCACAAGGGGAGATGGGAAGAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR CCA 90 bp | GCCTGGCTCAGCCCAACATGTGGAACCTCTTCCCATCTCCCCTTGTaGGAGCCCCAGAATATGGGCCCTGCTGCTGCTCCCAACACTATA | + |
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Preference number: 1 (lower is better) Translates to: AWLSPTCGTSSHLPL*EPQNMGPAAAPNTI Trigger: TATAGTGTTGGGAGCAGCAGCAGGGCCCATATTCTGGGGCTCCCACAAGGGGAGATGGGAAGAGGTTCCACATGTTGGGCTGAGCCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR GCA 90 bp | TGGACAGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATaGCTGGAGCTCAGGTTTGACTCTGGAATATACTGGAGCTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: WTDAQDVRGVGHLQA*LELRFDSGIYWSCP Trigger: AGGGCAGCTCCAGTATATTCCAGAGTCAAACCTGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCTGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR TCA 90 bp | ACAGAGCTCAGGGCTGCCCTCATGCTGGGCAAGTGCTTTAATCTCTaGGCTACACACACGTCTGGGTTCTGTATTTCTGCCCAGCCTGAC | + |
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Preference number: 1 (lower is better) Translates to: TELRAALMLGKCFNL*ATHTSGFCISAQPD Trigger: GTCAGGCTGGGCAGAAATACAGAACCCAGACGTGTGTGTAGCTCAGAGATTAAAGCACTTGCCCAGCATGAGGGCAGCCCTGAGCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR CCA 90 bp | CCGTTCTCATTGGTGCCTGGGCTTACAAAACACCTTTTGTGTCTCTaGAGGGCCTGGCTCAGCCCAACATGTGGAACCTCTTCCCATCTC | + |
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Preference number: 1 (lower is better) Translates to: PFSLVPGLTKHLLCL*RAWLSPTCGTSSHL Trigger: GAGATGGGAAGAGGTTCCACATGTTGGGCTGAGCCAGGCCCTCCAGAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR CCA 90 bp | CAGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATGCCTaGAGCTCAGGTTTGACTCTGGAATATACTGGAGCTGCCCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: QTLRMSEEWGIFRHA*SSGLTLEYTGAALK Trigger: TTTCAGGGCAGCTCCAGTATATTCCAGAGTCAAACCTGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR CCA 90 bp | ACCATGCATGCAATGTGTGGACAGACGCTCAGGATGTCAGAGGAGTaGGGCATCTTCAGGCATGCCTGGAGCTCAGGTTTGACTCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: TMHAMCGQTLRMSEE*GIFRHAWSSGLTLE Trigger: TTCCAGAGTCAAACCTGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATGCATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR CCA 90 bp | TACTGGAGCTGCCCTGAAACTCTTTGGTCCGTTCTCATTGGTGCCTaGGCTTACAAAACACCTTTTGTGTCTCTGGAGGGCCTGGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: YWSCPETLWSVLIGA*AYKTPFVSLEGLAQ Trigger: CTGAGCCAGGCCCTCCAGAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAGTTTCAGGGCAGCTCCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR CCA 90 bp | CATGAACAACAGTATCTGATGTGTGGGCACCATGCATGCAATGTGTaGACAGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: HEQQYLMCGHHACNV*TDAQDVRGVGHLQA Trigger: TGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATGCATGGTGCCCACACATCAGATACTGTTGTTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR TCA 90 bp | CCCAGACAGTGGAGACCACACAGAAAGAAAATGTCGAACTTGAAGTaGCCTCCAGAAGCTGGTGACATTTCCCCCAGTTCCTCTCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: PRQWRPHRKKMSNLK*PPEAGDISPSSSQS Trigger: ACTCTGAGAGGAACTGGGGGAAATGTCACCAGCTTCTGGAGGTCACTTCAAGTTCGACATTTTCTTTCTGTGTGGTCTCCACTGTCTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR TCA 90 bp | TGCTACCCAGACAGTGGAGACCACACAGAAAGAAAATGTCGAACTTaGAGTGACCTCCAGAAGCTGGTGACATTTCCCCCAGTTCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: CYPDSGDHTERKCRT*SDLQKLVTFPPVPL Trigger: GAGAGGAACTGGGGGAAATGTCACCAGCTTCTGGAGGTCACTTCAAGTTCGACATTTTCTTTCTGTGTGGTCTCCACTGTCTGGGTAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR CCA 90 bp | GAGGCACAGCCAGGATGGCTTGGCACATTACCTAGAAGTTTCAATTaGGGGAGAGAATCACTCAAGAAAGAAACAGGCAACCCAACCAGA | + |
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Preference number: 1 (lower is better) Translates to: EAQPGWLGTLPRSFN*GRESLKKETGNPTR Trigger: TCTGGTTGGGTTGCCTGTTTCTTTCTTGAGTGATTCTCTCCCCCAATTGAAACTTCTAGGTAATGTGCCAAGCCATCCTGGCTGTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR TCA 90 bp | TTAAATGGTCTTGGAAACTCGGGAAGTTGCATGAACAACAGTATCTaGTGTGTGGGCACCATGCATGCAATGTGTGGACAGACGCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: LNGLGNSGSCMNNSI*CVGTMHAMCGQTLR Trigger: CCTGAGCGTCTGTCCACACATTGCATGCATGGTGCCCACACATCAGATACTGTTGTTCATGCAACTTCCCGAGTTTCCAAGACCATTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR CCA 90 bp | CTCAGGTTTGACTCTGGAATATACTGGAGCTGCCCTGAAACTCTTTaGTCCGTTCTCATTGGTGCCTGGGCTTACAAAACACCTTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: LRFDSGIYWSCPETL*SVLIGAWAYKTPFV Trigger: CACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAGTTTCAGGGCAGCTCCAGTATATTCCAGAGTCAAACCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR TCA 90 bp | GAGGGAACAGGCAGCCTCAATTTGTACATGGGCTTCTTGATACACTaGCCTACTTTAGAGATGGCTGTGCTTTTTGCTCAGTTTTCCACT | + |
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Preference number: 1 (lower is better) Translates to: EGTGSLNLYMGFLIH*PTLEMAVLFAQFST Trigger: AGTGGAAAACTGAGCAAAAAGCACAGCCATCTCTAAAGTAGGTCAGTGTATCAAGAAGCCCATGTACAAATTGAGGCTGCCTGTTCCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR TCA 90 bp | AGTCTTAGAAGTAAAAGCATGCTTCAGTCCCACCACCGTCCAGAGTaGCTGGTTAGTCAGCGCAGTCTACTTCGGTTTCACTTTAATATA | + |
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Preference number: 1 (lower is better) Translates to: SLRSKSMLQSHHRPE*LVSQRSLLRFHFNI Trigger: TATATTAAAGTGAAACCGAAGTAGACTGCGCTGACTAACCAGTCACTCTGGACGGTGGTGGGACTGAAGCATGCTTTTACTTCTAAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR TCA 90 bp | ACACAGAAAGAAAATGTCGAACTTGAAGTGACCTCCAGAAGCTGGTaGCATTTCCCCCAGTTCCTCTCAGAGTTACTATGGAGTAAACAG | + |
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Preference number: 1 (lower is better) Translates to: TQKENVELEVTSRSW*HFPQFLSELLWSKQ Trigger: CTGTTTACTCCATAGTAACTCTGAGAGGAACTGGGGGAAATGTCACCAGCTTCTGGAGGTCACTTCAAGTTCGACATTTTCTTTCTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR GCA 90 bp | ACAAAGAAAGCTCATCAAGGAATGCACTGGGACTTTTATCTAGAGTaGTACCCAGACAGTGGAGACCACACAGAAAGAAAATGTCGAACT | + |
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Preference number: 1 (lower is better) Translates to: TKKAHQGMHWDFYLE*YPDSGDHTERKCRT Trigger: AGTTCGACATTTTCTTTCTGTGTGGTCTCCACTGTCTGGGTAGCACTCTAGATAAAAGTCCCAGTGCATTCCTTGATGAGCTTTCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR GCA 90 bp | TATAGACAAATGGCTATTATTTGGAAGCAACCCCATATAGGTAACTaGCGTTGTCTTGGAGGCTCATTAATTTCTCTGACCCAGCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: YRQMAIIWKQPHIGN*RCLGGSLISLTQQG Trigger: ACCCTGCTGGGTCAGAGAAATTAATGAGCCTCCAAGACAACGGCAGTTACCTATATGGGGTTGCTTCCAAATAATAGCCATTTGTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR GCA 90 bp | AAAGGTCAAAGGTGGAAGTGGGAGGGTCCTTATTTAGGATGGAAATaGATGTTCTGTTGCTCCCCTAAGAATGTGTCAAATCATCAATGC | + |
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Preference number: 1 (lower is better) Translates to: KGQRWKWEGPYLGWK*MFCCSPKNVSNHQC Trigger: GCATTGATGATTTGACACATTCTTAGGGGAGCAACAGAACATGCATTTCCATCCTAAATAAGGACCCTCCCACTTCCACCTTTGACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR CCA 90 bp | TTAGAAGTAAAAGCATGCTTCAGTCCCACCACCGTCCAGAGTGACTaGTTAGTCAGCGCAGTCTACTTCGGTTTCACTTTAATATATACT | + |
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Preference number: 1 (lower is better) Translates to: LEVKACFSPTTVQSD*LVSAVYFGFTLIYT Trigger: AGTATATATTAAAGTGAAACCGAAGTAGACTGCGCTGACTAACCAGTCACTCTGGACGGTGGTGGGACTGAAGCATGCTTTTACTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR GCA 90 bp | AAATGCATGTTCTGTTGCTCCCCTAAGAATGTGTCAAATCATCAATaGCACTCAACAGTAAGCATTCATGATGATTGGGGTACTCTAGGA | + |
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Preference number: 1 (lower is better) Translates to: KCMFCCSPKNVSNHQ*HSTVSIHDDWGTLG Trigger: TCCTAGAGTACCCCAATCATCATGAATGCTTACTGTTGAGTGGCATTGATGATTTGACACATTCTTAGGGGAGCAACAGAACATGCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR GCA 90 bp | CAATGCTCAAATGTTTCTGTGTCATTAAAAACAGAGCAATCGTTGTaGATTCAAGCTAGGTTAAATGGTCTTGGAAACTCGGGAAGTTGC | + |
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Preference number: 1 (lower is better) Translates to: QCSNVSVSLKTEQSL*IQARLNGLGNSGSC Trigger: GCAACTTCCCGAGTTTCCAAGACCATTTAACCTAGCTTGAATGCACAACGATTGCTCTGTTTTTAATGACACAGAAACATTTGAGCATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR CCA 90 bp | ATTATTAAAGGTCAAAGGTGGAAGTGGGAGGGTCCTTATTTAGGATaGAAATGCATGTTCTGTTGCTCCCCTAAGAATGTGTCAAATCAT | + |
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Preference number: 1 (lower is better) Translates to: IIKGQRWKWEGPYLG*KCMFCCSPKNVSNH Trigger: ATGATTTGACACATTCTTAGGGGAGCAACAGAACATGCATTTCCATCCTAAATAAGGACCCTCCCACTTCCACCTTTGACCTTTAATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR TCA 90 bp | TATAGAAAAGCTGGCCACATAAACCATCAAGAGATAAAATCTTGCTaGAACACGCTAACTGGAAGAGCTGAGTTATTTCAACTTCGATTT | + |
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Preference number: 1 (lower is better) Translates to: YRKAGHINHQEIKSC*NTLTGRAELFQLRF Trigger: AAATCGAAGTTGAAATAACTCAGCTCTTCCAGTTAGCGTGTTTCAGCAAGATTTTATCTCTTGATGGTTTATGTGGCCAGCTTTTCTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGCACCATGCATGCAATGTGTGGACAGACGCTCAGGATGTCAGAGGAGTGGGCAGGGGGCAGCAGTaGGACTGCTGGGGAGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: CGHHACNVWTDAQDVRGVGRGQQ*DCWGGQ Trigger: TTGCCCTCCCCAGCAGTCCCACTGCTGCCCCCTGCC...CACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATGCATGGTGCCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR-3UTR CCA 90 bp | AGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATGCCTGGAGCTCAGACCGTCCAGAGTGACTaGTTAGTCAGCGCAGTCTAC | + |
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Preference number: 2 (lower is better) Translates to: RRSGCQRSGASSGMPGAQTVQSD*LVSAVY Trigger: GTAGACTGCGCTGACTAACCAGTCACTCTGGACGGT...CTGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR-3UTR CCA 90 bp | CATGCAATGTGTGGACAGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGTCCCATCTCCCCTTGTaGGAGCCCCAGAATATGGGC | + |
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Preference number: 2 (lower is better) Translates to: HAMCGQTLRMSEEWGIFRSHLPL*EPQNMG Trigger: GCCCATATTCTGGGGCTCCCACAAGGGGAGATGGGA...CCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR-3UTR GCA 90 bp | CAGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATGCCTGGAGCTCAGTCCGTTCTCATTGGTaGCTGGGCTTACAAAACACC | + |
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Preference number: 2 (lower is better) Translates to: QTLRMSEEWGIFRHAWSSVRSHW*LGLQNT Trigger: GGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGAC...TGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAAACACCTTTTGTGTCTCGGGAGCCCCAGAATATaGGCCCTGCTGCTGCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LFGPFSLVPGLTKHLLCLGSPRI*ALLLLP Trigger: TGGGAGCAGCAGCAGGGCCCATATTCTGGGGCTCCC...GAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR CAA 90 bp | CTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAAACACCTTTaGTGTCTCTGGAGGGCCTGGCTCAGCCCAACATGTGGAACCTCT | + |
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Preference number: 2 (lower is better) Translates to: LFGPFSLVPGLTKHL*CLWRAWLSPTCGTS Trigger: AGAGGTTCCACATGTTGGGCTGAGCCAGGCCCTCCAGAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR CAA 90 bp | ATGTCAGAGGAGTGGGGCATCTTCAGGCATGCCTGGAGCTCAGGTTaGACTCTGGAATATACTGGAGCTGCCCTGAAACTCTTTGGTCCG | + |
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Preference number: 2 (lower is better) Translates to: MSEEWGIFRHAWSSG*TLEYTGAALKLFGP Trigger: CGGACCAAAGAGTTTCAGGGCAGCTCCAGTATATTCCAGAGTCAAACCTGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCCCTGAAACTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAAACACACCACCGTCCAGAGTaGCTGGTTAGTCAGCGCAGT | + |
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Preference number: 2 (lower is better) Translates to: SCPETLWSVLIGAWAYKTHHRPE*LVSQRS Trigger: ACTGCGCTGACTAACCAGTCACTCTGGACGGTGGTG...TGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAGTTTCAGGGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGCACCATGCATGCAATGTGTGGACAGACGCTCAGGATGTCAGAGGAGTGGGAATATACTGGAGCTaGCCTGAAACTCTTTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: CGHHACNVWTDAQDVRGVGIYWS*PETLWS Trigger: GGACCAAAGAGTTTCAGGGCAGCTCCAGTATATTCC...CACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATGCATGGTGCCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAAACACCTTTTGTGTCTCTCCCATCTCCCCTTGTaGGAGCCCCAGAATATGGGC | + |
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Preference number: 2 (lower is better) Translates to: LFGPFSLVPGLTKHLLCLSHLPL*EPQNMG Trigger: GCCCATATTCTGGGGCTCCCACAAGGGGAGATGGGA...GAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR CAA 90 bp | CTGGAATATACTGGAGCTGCCCTGAAACTCTTTGGTCCGTTCTCATaGGTGCCTGGGCTTACAAAACACCTTTTGTGTCTCTGGAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LEYTGAALKLFGPFS*VPGLTKHLLCLWRA Trigger: GGCCCTCCAGAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAGTTTCAGGGCAGCTCCAGTATATTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR-3UTR TCA 90 bp | CAGACAGTGGAGACCACACAGAAAGAAAATGTCGAACTTGAAGTGACCTCCAGACACCACCGTCCAGAGTaGCTGGTTAGTCAGCGCAGT | + |
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Preference number: 2 (lower is better) Translates to: QTVETTQKENVELEVTSRHHRPE*LVSQRS Trigger: ACTGCGCTGACTAACCAGTCACTCTGGACGGTGGTG...TCTGGAGGTCACTTCAAGTTCGACATTTTCTTTCTGTGTGGTCTCCACTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTTGGGTTGTGACTTTTCCTCCAATGCTGGGGACAGAGCTCAGGGCTGCCATGAACAACAGTATCTaGTGTGTGGGCACCATGCAT | + |
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Preference number: 2 (lower is better) Translates to: FSWVVTFPPMLGTELRAAMNNSI*CVGTMH Trigger: ATGCATGGTGCCCACACATCAGATACTGTTGTTCAT...GGCAGCCCTGAGCTCTGTCCCCAGCATTGGAGGAAAAGTCACAACCCAAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR-3UTR CCA 90 bp | AAACTCGGGAAGTTGCATGAACAACAGTATCTGATGTGTGGGCACCATGCATGCGCTCAGCCCAACATGTaGAACCTCTTCCCATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: KLGKLHEQQYLMCGHHACAQPNM*NLFPSP Trigger: GGGAGATGGGAAGAGGTTCCACATGTTGGGCTGAGC...GCATGCATGGTGCCCACACATCAGATACTGTTGTTCATGCAACTTCCCGAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCATGATGATTGGGGTACTCTAGGAAGGTTTGGAAACACGATTCCTGACCCCCACCTTTTGTGTCTCTaGAGGGCCTGGCTCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: IHDDWGTLGRFGNTIPDPHLLCL*RAWLSP Trigger: TGGGCTGAGCCAGGCCCTCCAGAGACACAAAAGGTG...GGGGTCAGGAATCGTGTTTCCAAACCTTCCTAGAGTACCCCAATCATCATGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR-3UTR GCA 90 bp | ATCTCCCCTTGTGGGAGCCCCAGAATATGGGCCCTGCTGCTGCTCCCAACACTATTTGAACATGTCGGTTaGATCCCAGAGTATAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: ISPCGSPRIWALLLLPTLFEHVG*IPEYKN Trigger: GTTTTTATACTCTGGGATGCAACCGACATGTTCAAA...TAGTGTTGGGAGCAGCAGCAGGGCCCATATTCTGGGGCTCCCACAAGGGGAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACAGTGGAGACCACACAGAAAGAAAATGTCGAACTTGAAGTGACCTCCAGAAGGATGTCAGAGGAGTaGGGCATCTTCAGGCATGCC | + |
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Preference number: 2 (lower is better) Translates to: QTVETTQKENVELEVTSRRMSEE*GIFRHA Trigger: GGCATGCCTGAAGATGCCCCACTCCTCTGACATCCT...TCTGGAGGTCACTTCAAGTTCGACATTTTCTTTCTGTGTGGTCTCCACTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| 3UTR-3UTR TCA 90 bp | CAGTGGGACTGCTGGGGAGGGCAAATTTCCTGTCACCTAAAGCAGAAATTGTTTGGGATTTCAAGCATTTaGACATGTCGGTTGCATCCC | + |
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Preference number: 2 (lower is better) Translates to: QWDCWGGQISCHLKQKLFGISSI*TCRLHP Trigger: GGGATGCAACCGACATGTTCAAATGCTTGAAATCCC...AAACAATTTCTGCTTTAGGTGACAGGAAATTTGCCCTCCCCAGCAGTCCCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR-3UTR CCA 90 bp | CACCTTTTGTGTCTCTGGAGGGCCTGGCTCAGCCCAACATGTGGAACCTCTTCCAACACTTGTGAAAATTaGCGCAAAATGAGTTGTACA | + |
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Preference number: 2 (lower is better) Translates to: HLLCLWRAWLSPTCGTSSNTCEN*RKMSCT Trigger: TGTACAACTCATTTTGCGCCAATTTTCACAAGTGTT...GGAAGAGGTTCCACATGTTGGGCTGAGCCAGGCCCTCCAGAGACACAAAAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACAGTGGAGACCACACAGAAAGAAAATGTCGAACTTGAAGTGACCTCCAGAATGAGCCTTTGGTTCTaGGTTTCAGGCCCTATAGGC | + |
|
Preference number: 2 (lower is better) Translates to: QTVETTQKENVELEVTSRMSLWF*VSGPIG Trigger: GCCTATAGGGCCTGAAACCCAGAACCAAAGGCTCAT...TCTGGAGGTCACTTCAAGTTCGACATTTTCTTTCTGTGTGGTCTCCACTGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR-3UTR TCA 90 bp | ATTCATGATGATTGGGGTACTCTAGGAAGGTTTGGAAACACGATTCCTGACCCCAGGCTTACATCAAAGTaGAGAGCTGCCAGTAACTGC | + |
|
Preference number: 2 (lower is better) Translates to: IHDDWGTLGRFGNTIPDPRLTSK*RAASNC Trigger: GCAGTTACTGGCAGCTCTTCACTTTGATGTAAGCCT...GGGGTCAGGAATCGTGTTTCCAAACCTTCCTAGAGTACCCCAATCATCATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTGCATGAACAACAGTATCTGATGTGTGGGCACCATGCATGCAATGTGTGGGGAATATACTGGAGCTaGCCTGAAACTCTTTGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: KLHEQQYLMCGHHACNVWGIYWS*PETLWS Trigger: GGACCAAAGAGTTTCAGGGCAGCTCCAGTATATTCC...CCACACATTGCATGCATGGTGCCCACACATCAGATACTGTTGTTCATGCAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTGCATGAACAACAGTATCTGATGTGTGGGCACCATGCATGCAATGTGTGGGACTCTGGAATATACTaGAGCTGCCCTGAAACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: KLHEQQYLMCGHHACNVWDSGIY*SCPETL Trigger: AAGAGTTTCAGGGCAGCTCCAGTATATTCCAGAGTC...CCACACATTGCATGCATGGTGCCCACACATCAGATACTGTTGTTCATGCAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCCAGAGTGACTGGTTAGTCAGCGCAGTCTACTTCGGTTTCACTTTAATATATTTTGAACATGTCGGTTaGATCCCAGAGTATAAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: VQSDWLVSAVYFGFTLIYFEHVG*IPEYKN Trigger: GTTTTTATACTCTGGGATGCAACCGACATGTTCAAA...ATATATTAAAGTGAAACCGAAGTAGACTGCGCTGACTAACCAGTCACTCTGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR-3UTR CCA 90 bp | GACTGCTGGGGAGGGCAAATTTCCTGTCACCTAAAGCAGAAATTGTTTAAAATAAACACTTGTGAAAATTaGCGCAAAATGAGTTGTACA | + |
|
Preference number: 2 (lower is better) Translates to: DCWGGQISCHLKQKLFKINTCEN*RKMSCT Trigger: TGTACAACTCATTTTGCGCCAATTTTCACAAGTGTT...TATTTTAAACAATTTCTGCTTTAGGTGACAGGAAATTTGCCCTCCCCAGCAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR CCA 72 bp | AGCCCAACATGTGGAACCTCTTCCCATCTCCCCTTGTaGGAGCCCCAGAATATGGGCCCTGCTGCTGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SPTCGTSSHLPL*EPQNMGPAAAP Trigger: GGGAGCAGCAGCAGGGCCCATATTCTGGGGCTCCCACAAGGGGAGATGGGAAGAGGTTCCACATGTTGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR GCA 72 bp | TCTCCCCTTGTGGGAGCCCCAGAATATGGGCCCTGCTaGTGCTCCCAACACTATAGAGCTGGGACTGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SPLVGAPEYGPC*CSQHYRAGTEW Trigger: CCACTCAGTCCCAGCTCTATAGTGTTGGGAGCAGCAGCAGGGCCCATATTCTGGGGCTCCCACAAGGGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR GCA 72 bp | CCATCTCCCCTTGTGGGAGCCCCAGAATATGGGCCCTaGTGCTGCTCCCAACACTATAGAGCTGGGACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PSPLVGAPEYGP*CCSQHYRAGTE Trigger: CTCAGTCCCAGCTCTATAGTGTTGGGAGCAGCAGCAGGGCCCATATTCTGGGGCTCCCACAAGGGGAGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR GCA 72 bp | GCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATaGCTGGAGCTCAGGTTTGACTCTGGAATATACTGG | + |
|
Preference number: 3 (lower is better) Translates to: AQDVRGVGHLQA*LELRFDSGIYW Trigger: CCAGTATATTCCAGAGTCAAACCTGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR CCA 72 bp | GGGCTTACAAAACACCTTTTGTGTCTCTGGAGGGCCTaGCTCAGCCCAACATGTGGAACCTCTTCCCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: GLTKHLLCLWRA*LSPTCGTSSHL Trigger: GAGATGGGAAGAGGTTCCACATGTTGGGCTGAGCCAGGCCCTCCAGAGACACAAAAGGTGTTTTGTAAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR CCA 72 bp | TTGGTGCCTGGGCTTACAAAACACCTTTTGTGTCTCTaGAGGGCCTGGCTCAGCCCAACATGTGGAACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LVPGLTKHLLCL*RAWLSPTCGTS Trigger: AGAGGTTCCACATGTTGGGCTGAGCCAGGCCCTCCAGAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR CCA 72 bp | CAGTATCTGATGTGTGGGCACCATGCATGCAATGTGTaGACAGACGCTCAGGATGTCAGAGGAGTGGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: QYLMCGHHACNV*TDAQDVRGVGH Trigger: ATGCCCCACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATGCATGGTGCCCACACATCAGATACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGCTGCCCTGAAACTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAATCTTCCCATCTCCCCTaGTGGGAGCCCCAGAATATG | + |
|
Preference number: 3 (lower is better) Translates to: WSCPETLWSVLIGAWAYKSSHLP*WEPQNM Trigger: CATATTCTGGGGCTCCCACAAGGGGAGATGGGAAGA...TTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAGTTTCAGGGCAGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGGGCACCATGCATGCAATGTGTGGACAGACGCTCAGGATGTCAGAGGAGTGCCTGGAGCTCAGGTTaGACTCTGGAATATACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VWAPCMQCVDRRSGCQRSAWSSG*TLEYTG Trigger: TCCAGTATATTCCAGAGTCAAACCTGAGCTCCAGGC...ACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATGCATGGTGCCCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR TCA 72 bp | AGGGCTGCCCTCATGCTGGGCAAGTGCTTTAATCTCTaGGCTACACACACGTCTGGGTTCTGTATTTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RAALMLGKCFNL*ATHTSGFCISA Trigger: GGCAGAAATACAGAACCCAGACGTGTGTGTAGCTCAGAGATTAAAGCACTTGCCCAGCATGAGGGCAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR TCA 72 bp | GAGTATGGGGAGGAGGGAGATATAGTCACACTTCTGTaGCCAGAGGCACAGCCAGGATGGCTTGGCACATTA | + |
|
Preference number: 3 (lower is better) Translates to: EYGEEGDIVTLL*PEAQPGWLGTL Trigger: TAATGTGCCAAGCCATCCTGGCTGTGCCTCTGGTCACAGAAGTGTGACTATATCTCCCTCCTCCCCATACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR-3UTR CAA 90 bp | ACCTTTTGTGTCTCTGGAGGGCCTGGCTCAGCCCAACATGTGGAACCTCTTCCCTGGGATTTCAAGCATTaGAACATGTCGGTTGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: TFCVSGGPGSAQHVEPLPWDFKH*NMSVAS Trigger: GGATGCAACCGACATGTTCAAATGCTTGAAATCCCA...GGGAAGAGGTTCCACATGTTGGGCTGAGCCAGGCCCTCCAGAGACACAAAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCTTGGGTTGTGACTTTTCCTCCAATGCTGGGGACAGAGCTCAGGGCTGCCTTTGGTCCGTTCTCATaGGTGCCTGGGCTTACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FSWVVTFPPMLGTELRAAFGPFS*VPGLTK Trigger: TTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAA...GGCAGCCCTGAGCTCTGTCCCCAGCATTGGAGGAAAAGTCACAACCCAAGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR TCA 72 bp | AGTAAAAGCATGCTTCAGTCCCACCACCGTCCAGAGTaGCTGGTTAGTCAGCGCAGTCTACTTCGGTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SKSMLQSHHRPE*LVSQRSLLRFH Trigger: GTGAAACCGAAGTAGACTGCGCTGACTAACCAGTCACTCTGGACGGTGGTGGGACTGAAGCATGCTTTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR CCA 72 bp | TGCCCTGAAACTCTTTGGTCCGTTCTCATTGGTGCCTaGGCTTACAAAACACCTTTTGTGTCTCTGGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: CPETLWSVLIGA*AYKTPFVSLEG Trigger: GCCCTCCAGAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAGTTTCAGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR CCA 72 bp | TCCCCCAAAGTAAGCCATGGTGAGGGAAACAGCATGTaGGAAGAGAGGTGGTTCAAACCAACCAACCAACCA | + |
|
Preference number: 3 (lower is better) Translates to: SPKVSHGEGNSM*EERWFKPTNQP Trigger: TGGTTGGTTGGTTGGTTTGAACCACCTCTCTTCCCACATGCTGTTTCCCTCACCATGGCTTACTTTGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR TCA 72 bp | CCTATAGGCTGGGAATTATGGGATGGAATGAGGTACTaGGCAGCACTTGACTCACTTAGGGTGGGACAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PIGWELWDGMRY*AALDSLRVGQS Trigger: GCTTTGTCCCACCCTAAGTGAGTCAAGTGCTGCTCAGTACCTCATTCCATCCCATAATTCCCAGCCTATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR CCA 72 bp | AAAGCATGCTTCAGTCCCACCACCGTCCAGAGTGACTaGTTAGTCAGCGCAGTCTACTTCGGTTTCACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: KACFSPTTVQSD*LVSAVYFGFTL Trigger: TAAAGTGAAACCGAAGTAGACTGCGCTGACTAACCAGTCACTCTGGACGGTGGTGGGACTGAAGCATGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR CCA 72 bp | TTCTCTGACCCAGCAGGGTTCTCCTTAAATGTCAGCTaGGAGACTCCAGCTTTAACTCCTTATAGCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: FSDPAGFSLNVS*ETPALTPYSRR Trigger: CCTCCTGCTATAAGGAGTTAAAGCTGGAGTCTCCCAGCTGACATTTAAGGAGAACCCTGCTGGGTCAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGCTGCCCTGAAACTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAATGGGATTTCAAGCATTaGAACATGTCGGTTGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: WSCPETLWSVLIGAWAYKWDFKH*NMSVAS Trigger: GGATGCAACCGACATGTTCAAATGCTTGAAATCCCA...TTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAGTTTCAGGGCAGCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGTCCTTATTTAGGATGGAAATGCATGTTCTGTTGCTCCCCTAAGAATGTGTCTTCCCATCTCCCCTaGTGGGAGCCCCAGAATATG | + |
|
Preference number: 3 (lower is better) Translates to: EGPYLGWKCMFCCSPKNVSSHLP*WEPQNM Trigger: CATATTCTGGGGCTCCCACAAGGGGAGATGGGAAGA...CACATTCTTAGGGGAGCAACAGAACATGCATTTCCATCCTAAATAAGGACCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR TCA 72 bp | CTTGACTCACTTAGGGTGGGACAAAGCCTGAGTACATaGGACAACCTCACCAATGGTAGAGAACACTGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LDSLRVGQSLST*DNLTNGREHCN Trigger: GTTGCAGTGTTCTCTACCATTGGTGAGGTTGTCTCATGTACTCAGGCTTTGTCCCACCCTAAGTGAGTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR TCA 72 bp | TGGAGACCACACAGAAAGAAAATGTCGAACTTGAAGTaGCCTCCAGAAGCTGGTGACATTTCCCCCAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: WRPHRKKMSNLK*PPEAGDISPSS Trigger: GGAACTGGGGGAAATGTCACCAGCTTCTGGAGGTCACTTCAAGTTCGACATTTTCTTTCTGTGTGGTCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR TCA 72 bp | GACAGTGGAGACCACACAGAAAGAAAATGTCGAACTTaGAGTGACCTCCAGAAGCTGGTGACATTTCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: DSGDHTERKCRT*SDLQKLVTFPP Trigger: TGGGGGAAATGTCACCAGCTTCTGGAGGTCACTTCAAGTTCGACATTTTCTTTCTGTGTGGTCTCCACTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR CCA 72 bp | GACTCTGGAATATACTGGAGCTGCCCTGAAACTCTTTaGTCCGTTCTCATTGGTGCCTGGGCTTACAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: DSGIYWSCPETL*SVLIGAWAYKT Trigger: TGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAGTTTCAGGGCAGCTCCAGTATATTCCAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACAGTGGAGACCACACAGAAAGAAAATGTCGAACTTGAAGTGACCTCCAGATGGAGTAAACAGGTGTaGGGTGGTAGGGATGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: QTVETTQKENVELEVTSRWSKQV*GGRDGI Trigger: TATACCATCCCTACCACCCAACACCTGTTTACTCCA...TCTGGAGGTCACTTCAAGTTCGACATTTTCTTTCTGTGTGGTCTCCACTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR TCA 72 bp | GAAAATGTCGAACTTGAAGTGACCTCCAGAAGCTGGTaGCATTTCCCCCAGTTCCTCTCAGAGTTACTATGG | + |
|
Preference number: 3 (lower is better) Translates to: ENVELEVTSRSW*HFPQFLSELLW Trigger: CCATAGTAACTCTGAGAGGAACTGGGGGAAATGTCACCAGCTTCTGGAGGTCACTTCAAGTTCGACATTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR CCA 72 bp | GGTCAAAGGTGGAAGTGGGAGGGTCCTTATTTAGGATaGAAATGCATGTTCTGTTGCTCCCCTAAGAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: GQRWKWEGPYLG*KCMFCCSPKNV Trigger: CACATTCTTAGGGGAGCAACAGAACATGCATTTCCATCCTAAATAAGGACCCTCCCACTTCCACCTTTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR TCA 72 bp | GGCAGCCTCAATTTGTACATGGGCTTCTTGATACACTaGCCTACTTTAGAGATGGCTGTGCTTTTTGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GSLNLYMGFLIH*PTLEMAVLFAQ Trigger: CTGAGCAAAAAGCACAGCCATCTCTAAAGTAGGTCAGTGTATCAAGAAGCCCATGTACAAATTGAGGCTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR TCA 72 bp | AAGTTTGGTTCTCAGGTAGTCAAGGAAGATGGTAGCTaGTCAGAGTATGGGGAGGAGGGAGATATAGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: KFGSQVVKEDGS*SEYGEEGDIVT Trigger: TGTGACTATATCTCCCTCCTCCCCATACTCTGATCAGCTACCATCTTCCTTGACTACCTGAGAACCAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR GCA 72 bp | GCTCATCAAGGAATGCACTGGGACTTTTATCTAGAGTaGTACCCAGACAGTGGAGACCACACAGAAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: AHQGMHWDFYLE*YPDSGDHTERK Trigger: TTTTCTTTCTGTGTGGTCTCCACTGTCTGGGTAGCACTCTAGATAAAAGTCCCAGTGCATTCCTTGATGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR CCA 72 bp | GCACTGGGACTTTTATCTAGAGTGCTACCCAGACAGTaGAGACCACACAGAAAGAAAATGTCGAACTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ALGLLSRVLPRQ*RPHRKKMSNLK Trigger: CTTCAAGTTCGACATTTTCTTTCTGTGTGGTCTCCACTGTCTGGGTAGCACTCTAGATAAAAGTCCCAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR GCA 72 bp | AGGTGGAAGTGGGAGGGTCCTTATTTAGGATGGAAATaGATGTTCTGTTGCTCCCCTAAGAATGTGTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: RWKWEGPYLGWK*MFCCSPKNVSN Trigger: ATTTGACACATTCTTAGGGGAGCAACAGAACATGCATTTCCATCCTAAATAAGGACCCTCCCACTTCCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR GCA 72 bp | GAGGGTCCTTATTTAGGATGGAAATGCATGTTCTGTTaGTCCCCTAAGAATGTGTCAAATCATCAATGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: EGPYLGWKCMFC*SPKNVSNHQCH Trigger: GTGGCATTGATGATTTGACACATTCTTAGGGGAGCAACAGAACATGCATTTCCATCCTAAATAAGGACCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR CCA 72 bp | CATCAATGCCACTCAACAGTAAGCATTCATGATGATTaGGGTACTCTAGGAAGGTTTGGAAACACGATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HQCHSTVSIHDD*GTLGRFGNTIP Trigger: AGGAATCGTGTTTCCAAACCTTCCTAGAGTACCCCAATCATCATGAATGCTTACTGTTGAGTGGCATTGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR TCA 72 bp | AGGAATGCCTTTTCAAAGCTACTTTCTTCTAGACACTaGCAAAGAAAGCTCATCAAGGAATGCACTGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: RNAFSKLLSSRH*QRKLIKECTGT Trigger: AGTCCCAGTGCATTCCTTGATGAGCTTTCTTTGTCAGTGTCTAGAAGAAAGTAGCTTTGAAAAGGCATTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR GCA 72 bp | ACATTTGTGGGATTTCAAGCATTTGAACATGTCGGTTaGATCCCAGAGTATAAAAACCTTTGCACTTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TFVGFQAFEHVG*IPEYKNLCTSH Trigger: ATGAGAAGTGCAAAGGTTTTTATACTCTGGGATGCAACCGACATGTTCAAATGCTTGAAATCCCACAAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR CCA 72 bp | GGGAAATGTAATACAATCATTATTAAAGGTCAAAGGTaGAAGTGGGAGGGTCCTTATTTAGGATGGAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: GKCNTIIIKGQR*KWEGPYLGWKC Trigger: GCATTTCCATCCTAAATAAGGACCCTCCCACTTCCACCTTTGACCTTTAATAATGATTGTATTACATTTCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| 3UTR GCA 72 bp | AATGTTTCTGTGTCATTAAAAACAGAGCAATCGTTGTaGATTCAAGCTAGGTTAAATGGTCTTGGAAACTCG | + |
|
Preference number: 3 (lower is better) Translates to: NVSVSLKTEQSL*IQARLNGLGNS Trigger: CGAGTTTCCAAGACCATTTAACCTAGCTTGAATGCACAACGATTGCTCTGTTTTTAATGACACAGAAACATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR CCA 72 bp | TGTAATACAATCATTATTAAAGGTCAAAGGTGGAAGTaGGAGGGTCCTTATTTAGGATGGAAATGCATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: CNTIIIKGQRWK*EGPYLGWKCMF Trigger: GAACATGCATTTCCATCCTAAATAAGGACCCTCCCACTTCCACCTTTGACCTTTAATAATGATTGTATTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| CDS-3UTR CCA 90 bp | AGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATGCCTGGAGCTCAGCGCCTAGCAGGCGAGTaGTACAGCTGCGAGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRSGCQRSGASSGMPGAQRLAGE*YSCERR Trigger: TCTCCTCTCGCAGCTGTACCACTCGCCTGCTAGGCG...CTGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR CAA 72 bp | CTCAGCCCAACATGTGGAACCTCTTCCCATCTCCCCTaGTGGGAGCCCCAGAATATGGGCCCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPTCGTSSHLP*WEPQNMGPAAA Trigger: AGCAGCAGCAGGGCCCATATTCTGGGGCTCCCACAAGGGGAGATGGGAAGAGGTTCCACATGTTGGGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGGGCAGCAGTGGGACTGCTGGGGAGGGCAAATTTCCTGTCACCTAAAGGGCGAGTGGTACAGCTaGGAGAGGAGAGCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRGQQWDCWGGQISCHLKGEWYS*ERRAMF Trigger: AAACATGGCTCTCCTCTCGCAGCTGTACCACTCGCC...CTTTAGGTGACAGGAAATTTGCCCTCCCCAGCAGTCCCACTGCTGCCCCCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTTTGTGTCTCTGGAGGGCCTGGCTCAGCCCAACATGTGGAACCTCTTCCCGCCTAGCAGGCGAGTaGTACAGCTGCGAGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLLCLWRAWLSPTCGTSSRLAGE*YSCERR Trigger: TCTCCTCTCGCAGCTGTACCACTCGCCTGCTAGGCG...GGAAGAGGTTCCACATGTTGGGCTGAGCCAGGCCCTCCAGAGACACAAAAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR TCA 90 bp | ACCTTTTGTGTCTCTGGAGGGCCTGGCTCAGCCCAACATGTGGAACCTCTTCCCGCCCAAGGTTGTAGATaGAGATGCACCAGCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TFCVSGGPGSAQHVEPLPAQGCR*RCTSPR Trigger: CCTCGGGCTGGTGCATCTTCATCTACAACCTTGGGC...GGGAAGAGGTTCCACATGTTGGGCTGAGCCAGGCCCTCCAGAGACACAAAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| CDS-3UTR GCA 90 bp | CAGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATGCCTGGAGCTCAGAACCTGAATCTCTGTaGCTGGTGGTGTACAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QTLRMSEEWGIFRHAWSSEPESL*LVVYRA Trigger: GGCCCTGTACACCACCAGGCACAGAGATTCAGGTTC...TGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CCA 90 bp | ATCTCCCCTTGTGGGAGCCCCAGAATATGGGCCCTGCTGCTGCTCCCAACACTAAATCTCTGTGCCTGGTaGTGTACAGGGCCTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISPCGSPRIWALLLLPTLNLCAW*CTGPPN Trigger: GTTTGGAGGCCCTGTACACCACCAGGCACAGAGATT...TAGTGTTGGGAGCAGCAGCAGGGCCCATATTCTGGGGCTCCCACAAGGGGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CCA 90 bp | CACCTTTTGTGTCTCTGGAGGGCCTGGCTCAGCCCAACATGTGGAACCTCTTCCCTGAATCTCTGTGCCTaGTGGTGTACAGGGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLLCLWRAWLSPTCGTSSLNLCA*WCTGPP Trigger: TGGAGGCCCTGTACACCACCAGGCACAGAGATTCAG...GGAAGAGGTTCCACATGTTGGGCTGAGCCAGGCCCTCCAGAGACACAAAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR TCA 90 bp | GGCAGGGGGCAGCAGTGGGACTGCTGGGGAGGGCAAATTTCCTGTCACCTAAAGGCTTGGGCGAGCATATaGCACCTTAATGGTTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRGQQWDCWGGQISCHLKAWASI*HLNGFG Trigger: TCCAAAACCATTAAGGTGTCATATGCTCGCCCAAGC...CTTTAGGTGACAGGAAATTTGCCCTCCCCAGCAGTCCCACTGCTGCCCCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR TCA 90 bp | CATGCAATGTGTGGACAGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCTGCAAACTTCACTGTaGTGGGCTCGGAGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: HAMCGQTLRMSEEWGIFRLQTSL*WARRNL Trigger: CAGGTTCCTCCGAGCCCATCACAGTGAAGTTTGCAG...CCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR TCA 90 bp | CACCTTTTGTGTCTCTGGAGGGCCTGGCTCAGCCCAACATGTGGAACCTCTTCCAGCCGTTCAGTGTGCTaGTTGCTCTCTCTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLLCLWRAWLSPTCGTSSSRSVC*LLSLHL Trigger: AAGATGCAGAGAGAGCAATCAGCACACTGAACGGCT...GGAAGAGGTTCCACATGTTGGGCTGAGCCAGGCCCTCCAGAGACACAAAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CCA 90 bp | GTGTGGGCACCATGCATGCAATGTGTGGACAGACGCTCAGGATGTCAGAGGAGTAATCTCTGTGCCTGGTaGTGTACAGGGCCTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VWAPCMQCVDRRSGCQRSNLCAW*CTGPPN Trigger: GTTTGGAGGCCCTGTACACCACCAGGCACAGAGATT...ACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATGCATGGTGCCCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| 3UTR CAA 72 bp | CCGTTCTCATTGGTGCCTGGGCTTACAAAACACCTTTaGTGTCTCTGGAGGGCCTGGCTCAGCCCAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: PFSLVPGLTKHL*CLWRAWLSPTC Trigger: ACATGTTGGGCTGAGCCAGGCCCTCCAGAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR CAA 72 bp | GAGTGGGGCATCTTCAGGCATGCCTGGAGCTCAGGTTaGACTCTGGAATATACTGGAGCTGCCCTGAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: EWGIFRHAWSSG*TLEYTGAALKL Trigger: GAGTTTCAGGGCAGCTCCAGTATATTCCAGAGTCAAACCTGAGCTCCAGGCATGCCTGAAGATGCCCCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGGGCAGCAGTGGGACTGCTGGGGAGGGCAAATTTCCTGTCACCTAAAGGAACCTGGGGGTTTATaGCCATTGAAACTGGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: GRGQQWDCWGGQISCHLKEPGGL*PLKLVI Trigger: AATTACCAGTTTCAATGGTCATAAACCCCCAGGTTC...CTTTAGGTGACAGGAAATTTGCCCTCCCCAGCAGTCCCACTGCTGCCCCCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGCTGCCCTGAAACTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAAGGCGAGTGGTACAGCTaGGAGAGGAGAGCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WSCPETLWSVLIGAWAYKGEWYS*ERRAMF Trigger: AAACATGGCTCTCCTCTCGCAGCTGTACCACTCGCC...TTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAGTTTCAGGGCAGCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR TCA 90 bp | AGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATGCCTGGAGCTCAGGAACCTGGGGGTTTATaGCCATTGAAACTGGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: RRSGCQRSGASSGMPGAQEPGGL*PLKLVI Trigger: AATTACCAGTTTCAATGGTCATAAACCCCCAGGTTC...CTGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| CDS-3UTR TCA 90 bp | CTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAAACACCTTTTGTGTCTCGCCCAAGGTTGTAGATaGAGATGCACCAGCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFGPFSLVPGLTKHLLCLAQGCR*RCTSPR Trigger: CCTCGGGCTGGTGCATCTTCATCTACAACCTTGGGC...GAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR GCA 90 bp | CAGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATGCCTGGAGCTCAATCCCGAATAAGCTTTaGAGATTCAACCTCGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QTLRMSEEWGIFRHAWSSIPNKL*RFNLAN Trigger: ATTGGCGAGGTTGAATCTGCAAAGCTTATTCGGGAT...TGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR GCA 90 bp | CACCTTTTGTGTCTCTGGAGGGCCTGGCTCAGCCCAACATGTGGAACCTCTTCCGTTCAGTGTGCTGATTaGTCTCTCTGCATCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLLCLWRAWLSPTCGTSSVQCAD*SLCIFC Trigger: GCAAAAGATGCAGAGAGAGCAATCAGCACACTGAAC...GGAAGAGGTTCCACATGTTGGGCTGAGCCAGGCCCTCCAGAGACACAAAAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR GCA 90 bp | CAGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATGCCTGGAGCTCATTTCACATTGGTAACTaGACCAAAGGGGCCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QTLRMSEEWGIFRHAWSSFHIGN*TKGAKH Trigger: ATGTTTGGCCCCTTTGGTGCAGTTACCAATGTGAAA...TGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGGGCAGCAGTGGGACTGCTGGGGAGGGCAAATTTCCTGTCACCTAAAGTGTTTTTGTTCTGGTTaGGATTGGCTGCAAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRGQQWDCWGGQISCHLKCFCSG*DWLQTS Trigger: TGAAGTTTGCAGCCAATCCCAACCAGAACAAAAACA...CTTTAGGTGACAGGAAATTTGCCCTCCCCAGCAGTCCCACTGCTGCCCCCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR TCA 90 bp | TGGAGCTGCCCTGAAACTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAAGAAATCCCACTCATGTaGTCTACACCCATAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WSCPETLWSVLIGAWAYKEIPLM*STPIGE Trigger: CTCCCCTATGGGTGTAGATCACATGAGTGGGATTTC...TTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAGTTTCAGGGCAGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGGCACCATGCATGCAATGTGTGGACAGACGCTCAGGATGTCAGAGGAGTGGTTCAGTGTGCTGATTaGTCTCTCTGCATCTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CGHHACNVWTDAQDVRGVVQCAD*SLCIFC Trigger: GCAAAAGATGCAGAGAGAGCAATCAGCACACTGAAC...CACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATGCATGGTGCCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR GCA 90 bp | CTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAAACACCTTTTGTGTCTCAAGGGGCCAAACATCTaGCAGAGGATCCCCTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: LFGPFSLVPGLTKHLLCLKGPNI*QRIPSS Trigger: CGATGAGGGGATCCTCTGGCAGATGTTTGGCCCCTT...GAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CCA 90 bp | AGCTGCCCTGAAACTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAAACAGGGCTCGGAGGAACCTaGGGGTTTATGACCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCPETLWSVLIGAWAYKTGLGGT*GFMTIE Trigger: TTCAATGGTCATAAACCCCCAGGTTCCTCCGAGCCC...TGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAGTTTCAGGGCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CCA 90 bp | GAGCTCAGGTTTGACTCTGGAATATACTGGAGCTGCCCTGAAACTCTTTGGTCCGGGCTCGGAGGAACCTaGGGGTTTATGACCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELRFDSGIYWSCPETLWSGLGGT*GFMTIE Trigger: TTCAATGGTCATAAACCCCCAGGTTCCTCCGAGCCC...GGACCAAAGAGTTTCAGGGCAGCTCCAGTATATTCCAGAGTCAAACCTGAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CCA 90 bp | CTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAAACACCTTTTGTGTCTCCTGAATCTCTGTGCCTaGTGGTGTACAGGGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFGPFSLVPGLTKHLLCLLNLCA*WCTGPP Trigger: TGGAGGCCCTGTACACCACCAGGCACAGAGATTCAG...GAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR CAA 72 bp | TCACACTTCTGTGACCAGAGGCACAGCCAGGATGGCTaGGCACATTACCTAGAAGTTTCAATTGGGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHFCDQRHSQDG*AHYLEVSIGGE Trigger: CTCTCCCCCAATTGAAACTTCTAGGTAATGTGCCAAGCCATCCTGGCTGTGCCTCTGGTCACAGAAGTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| CDS-3UTR TCA 90 bp | TTCTCTTGGGTTGTGACTTTTCCTCCAATGCTGGGGACAGAGCTCAGGGCTGCCTCTGAGGGAGGTAGTTaGCAATTAAATTCGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSWVVTFPPMLGTELRAASEGGS*QLNSFS Trigger: GGAGAACGAATTTAATTGTCAACTACCTCCCTCAGA...GGCAGCCCTGAGCTCTGTCCCCAGCATTGGAGGAAAAGTCACAACCCAAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| CDS-3UTR TCA 90 bp | CATGCAATGTGTGGACAGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGTCTGAGGGAGGTAGTTaGCAATTAAATTCGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HAMCGQTLRMSEEWGIFRSEGGS*QLNSFS Trigger: GGAGAACGAATTTAATTGTCAACTACCTCCCTCAGA...CCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR TCA 90 bp | CAGACAGTGGAGACCACACAGAAAGAAAATGTCGAACTTGAAGTGACCTCCAGACTGCAAACTTCACTGTaGTGGGCTCGGAGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTVETTQKENVELEVTSRLQTSL*WARRNL Trigger: CAGGTTCCTCCGAGCCCATCACAGTGAAGTTTGCAG...TCTGGAGGTCACTTCAAGTTCGACATTTTCTTTCTGTGTGGTCTCCACTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| CDS-3UTR GCA 90 bp | CTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAAACACCTTTTGTGTCTCTCCCAATGTCATCCCTaGAGTCTTCCGCCATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFGPFSLVPGLTKHLLCLSQCHP*SLPPCG Trigger: ACCACATGGCGGAAGACTGCAGGGATGACATTGGGA...GAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR GCA 90 bp | CATGCAATGTGTGGACAGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGATCCCGAATAAGCTTTaGAGATTCAACCTCGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HAMCGQTLRMSEEWGIFRIPNKL*RFNLAN Trigger: ATTGGCGAGGTTGAATCTGCAAAGCTTATTCGGGAT...CCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR GCA 90 bp | AAGTTGCATGAACAACAGTATCTGATGTGTGGGCACCATGCATGCAATGTGTGGAAGGGGCCAAACATCTaGCAGAGGATCCCCTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: KLHEQQYLMCGHHACNVWKGPNI*QRIPSS Trigger: CGATGAGGGGATCCTCTGGCAGATGTTTGGCCCCTT...CCACACATTGCATGCATGGTGCCCACACATCAGATACTGTTGTTCATGCAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR GCA 90 bp | GAGCTCAGGTTTGACTCTGGAATATACTGGAGCTGCCCTGAAACTCTTTGGTCCGTAGCCGTTCAGACTTaGTATGGCCATTGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELRFDSGIYWSCPETLWSVAVQT*YGHCSF Trigger: GAAGCTGCAATGGCCATAGCAAGTCTGAACGGCTAC...GGACCAAAGAGTTTCAGGGCAGCTCCAGTATATTCCAGAGTCAAACCTGAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| 3UTR CAA 72 bp | ACTGGAGCTGCCCTGAAACTCTTTGGTCCGTTCTCATaGGTGCCTGGGCTTACAAAACACCTTTTGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGAALKLFGPFS*VPGLTKHLLCL Trigger: GAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAGTTTCAGGGCAGCTCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR TCA 90 bp | CAGTGGGACTGCTGGGGAGGGCAAATTTCCTGTCACCTAAAGCAGAAATTGTTTAGCCGTTCAGTGTGCTaGTTGCTCTCTCTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QWDCWGGQISCHLKQKLFSRSVC*LLSLHL Trigger: AAGATGCAGAGAGAGCAATCAGCACACTGAACGGCT...AAACAATTTCTGCTTTAGGTGACAGGAAATTTGCCCTCCCCAGCAGTCCCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR GCA 90 bp | TTGACTCTGGAATATACTGGAGCTGCCCTGAAACTCTTTGGTCCGTTCTCATTGTCCCAATGTCATCCCTaGAGTCTTCCGCCATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLEYTGAALKLFGPFSLSQCHP*SLPPCG Trigger: ACCACATGGCGGAAGACTGCAGGGATGACATTGGGA...CAATGAGAACGGACCAAAGAGTTTCAGGGCAGCTCCAGTATATTCCAGAGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR GCA 90 bp | GGATTTCAAGCATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAACCTTTGCGAACCTGAATCTCTGTaGCTGGTGGTGTACAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GFQAFEHVGCIPEYKNLCEPESL*LVVYRA Trigger: GGCCCTGTACACCACCAGGCACAGAGATTCAGGTTC...GCAAAGGTTTTTATACTCTGGGATGCAACCGACATGTTCAAATGCTTGAAATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| CDS-3UTR TCA 90 bp | GTCCAGAGTGACTGGTTAGTCAGCGCAGTCTACTTCGGTTTCACTTTAATATATGAAATCCCACTCATGTaGTCTACACCCATAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VQSDWLVSAVYFGFTLIYEIPLM*STPIGE Trigger: CTCCCCTATGGGTGTAGATCACATGAGTGGGATTTC...ATATATTAAAGTGAAACCGAAGTAGACTGCGCTGACTAACCAGTCACTCTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAAACACCTTTTGTGTCTCTTTCACATTGGTAACTaGACCAAAGGGGCCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LFGPFSLVPGLTKHLLCLFHIGN*TKGAKH Trigger: ATGTTTGGCCCCTTTGGTGCAGTTACCAATGTGAAA...GAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| CDS-3UTR GCA 90 bp | GACTGCTGGGGAGGGCAAATTTCCTGTCACCTAAAGCAGAAATTGTTTAAAATAGTAGCCGTTCAGACTTaGTATGGCCATTGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DCWGGQISCHLKQKLFKIVAVQT*YGHCSF Trigger: GAAGCTGCAATGGCCATAGCAAGTCTGAACGGCTAC...TATTTTAAACAATTTCTGCTTTAGGTGACAGGAAATTTGCCCTCCCCAGCAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| CDS-3UTR CCA 90 bp | CAGACAGTGGAGACCACACAGAAAGAAAATGTCGAACTTGAAGTGACCTCCAGATTAATGGTTTTGGACTaGAGTCTCAAGCCGTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTVETTQKENVELEVTSRLMVLD*SLKPFS Trigger: ACTGAACGGCTTGAGACTCCAGTCCAAAACCATTAA...TCTGGAGGTCACTTCAAGTTCGACATTTTCTTTCTGTGTGGTCTCCACTGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| CDS-3UTR GCA 90 bp | CTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAAACACCTTTTGTGTCTCTCTCTCTGCATCTTTTaGAGTCACATAGTTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFGPFSLVPGLTKHLLCLSLCIF*SHIVHK Trigger: TTTGTGAACTATGTGACTGCAAAAGATGCAGAGAGA...GAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| CDS-3UTR TCA 90 bp | TTGACTCTGGAATATACTGGAGCTGCCCTGAAACTCTTTGGTCCGTTCTCATTGGGGACTTGTTGGTTTTaGAGGAAACCTGTAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: LTLEYTGAALKLFGPFSLGTCWF*RKPVKF Trigger: AAATTTTACAGGTTTCCTTCAAAACCAACAAGTCCC...CAATGAGAACGGACCAAAGAGTTTCAGGGCAGCTCCAGTATATTCCAGAGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGTCCTTATTTAGGATGGAAATGCATGTTCTGTTGCTCCCCTAAGAATGTGACTTGCTATGGCCATTaGAGCTTCTTCATAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGPYLGWKCMFCCSPKNVTCYGH*SFFIVC Trigger: ACAAACTATGAAGAAGCTGCAATGGCCATAGCAAGT...CACATTCTTAGGGGAGCAACAGAACATGCATTTCCATCCTAAATAAGGACCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
||
| CDS-3UTR TCA 90 bp | GAGGGTCCTTATTTAGGATGGAAATGCATGTTCTGTTGCTCCCCTAAGAATGTGGGGACTTGTTGGTTTTaGAGGAAACCTGTAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: EGPYLGWKCMFCCSPKNVGTCWF*RKPVKF Trigger: AAATTTTACAGGTTTCCTTCAAAACCAACAAGTCCC...CACATTCTTAGGGGAGCAACAGAACATGCATTTCCATCCTAAATAAGGACCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000098950.6 |
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| CDS-3UTR GCA 90 bp | GTCCAGAGTGACTGGTTAGTCAGCGCAGTCTACTTCGGTTTCACTTTAATATATACTTGCTATGGCCATTaGAGCTTCTTCATAGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: VQSDWLVSAVYFGFTLIYTCYGH*SFFIVC Trigger: ACAAACTATGAAGAAGCTGCAATGGCCATAGCAAGT...ATATATTAAAGTGAAACCGAAGTAGACTGCGCTGACTAACCAGTCACTCTGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CCA 90 bp | GGATTTCAAGCATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAACCTTTGCTTAATGGTTTTGGACTaGAGTCTCAAGCCGTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: GFQAFEHVGCIPEYKNLCLMVLD*SLKPFS Trigger: ACTGAACGGCTTGAGACTCCAGTCCAAAACCATTAA...GCAAAGGTTTTTATACTCTGGGATGCAACCGACATGTTCAAATGCTTGAAATCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS CCA 90 bp | TGTGCCTGGTGGTGTACAGGGCCTCCAAACCGCCTAGCAGGCGAGTaGTACAGCTGCGAGAGGAGAGCCATGTTTTTGTTCTGGTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: CAWWCTGPPNRLAGE*YSCERRAMFLFWLG Trigger: TCCCAACCAGAACAAAAACATGGCTCTCCTCTCGCAGCTGTACCACTCGCCTGCTAGGCGGTTTGGAGGCCCTGTACACCACCAGGCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | AGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATGCCTGGAGCTCAGCCCCTCATCGGCGTCTaGCCCAAGGTTGTAGATGAA | + |
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Preference number: 5 (lower is better) Translates to: RRSGCQRSGASSGMPGAQPLIGV*PKVVDE Trigger: TTCATCTACAACCTTGGGCAAGACGCCGATGAGGGG...CTGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | AGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATGCCTGGAGCTCAGGACACCTTAATGGTTTaGGACTGGAGTCTCAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: RRSGCQRSGASSGMPGAQDTLMV*DWSLKP Trigger: CGGCTTGAGACTCCAGTCCAAAACCATTAAGGTGTC...CTGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | GGCAGGGGGCAGCAGTGGGACTGCTGGGGAGGGCAAATTTCCTGTCACCTAAAGTCTGCTTCTGACCGTTaGTCAAACCGGATAAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: GRGQQWDCWGGQISCHLKSASDR*SNRIKA Trigger: TGCCTTTATCCGGTTTGACAAACGGTCAGAAGCAGA...CTTTAGGTGACAGGAAATTTGCCCTCCCCAGCAGTCCCACTGCTGCCCCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | TGTGGGCACCATGCATGCAATGTGTGGACAGACGCTCAGGATGTCAGAGGAGTGCCCCTCATCGGCGTCTaGCCCAAGGTTGTAGATGAA | + |
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Preference number: 5 (lower is better) Translates to: CGHHACNVWTDAQDVRGVPLIGV*PKVVDE Trigger: TTCATCTACAACCTTGGGCAAGACGCCGATGAGGGG...CACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATGCATGGTGCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | GTGTGGGCACCATGCATGCAATGTGTGGACAGACGCTCAGGATGTCAGAGGAGTACAAGGACCCTGGAGTaGATGATTCGCCCAAACCGA | + |
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Preference number: 5 (lower is better) Translates to: VWAPCMQCVDRRSGCQRSTRTLE*MIRPNR Trigger: TCGGTTTGGGCGAATCATCAACTCCAGGGTCCTTGT...ACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATGCATGGTGCCCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | AGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATGCCTGGAGCTCAGTCTGCTTCTGACCGTTaGTCAAACCGGATAAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RRSGCQRSGASSGMPGAQSASDR*SNRIKA Trigger: TGCCTTTATCCGGTTTGACAAACGGTCAGAAGCAGA...CTGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | AGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATGCCTGGAGCTCAGTTGTTCTGGTTGGGATaGGCTGCAAACTTCACTGTG | + |
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Preference number: 5 (lower is better) Translates to: RRSGCQRSGASSGMPGAQLFWLG*AANFTV Trigger: CACAGTGAAGTTTGCAGCCAATCCCAACCAGAACAA...CTGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | AGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATGCCTGGAGCTCAGCGAATCACTTTCACATaGGTAACTGCACCAAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: RRSGCQRSGASSGMPGAQRITFT*VTAPKG Trigger: CCCCTTTGGTGCAGTTACCAATGTGAAAGTGATTCG...CTGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS TCA 90 bp | GAGGAAGCATTGCCGGGGACATTGACACCAGAAATCCCACTCATGTaGTCTACACCCATAGGGGAGAACCTGAATCTCTGTGCCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: EEALPGTLTPEIPLM*STPIGENLNLCAWW Trigger: CCACCAGGCACAGAGATTCAGGTTCTCCCCTATGGGTGTAGATCACATGAGTGGGATTTCTGGTGTCAATGTCCCCGGCAATGCTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | CTCTTTGGTCCGTTCTCATTGGTGCCTGGGCTTACAAAACACCTTTTGTGTCTCCAGCCCGAGGAAGCATaGCCGGGGACATTGACACCA | + |
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Preference number: 5 (lower is better) Translates to: LFGPFSLVPGLTKHLLCLQPEEA*PGTLTP Trigger: TGGTGTCAATGTCCCCGGCAATGCTTCCTCGGGCTG...GAGACACAAAAGGTGTTTTGTAAGCCCAGGCACCAATGAGAACGGACCAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | CAGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGCATGCCTGGAGCTCAGACTTGCTATGGCCATaGCAGCTTCTTCATAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: QTLRMSEEWGIFRHAWSSDLLWP*QLLHSL Trigger: CAAACTATGAAGAAGCTGCAATGGCCATAGCAAGTC...TGAGCTCCAGGCATGCCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | ATCTCCCCTTGTGGGAGCCCCAGAATATGGGCCCTGCTGCTGCTCCCAACACTACCACTGATGTATAAGTaGGCATCTTTGATGACCTCT | + |
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Preference number: 5 (lower is better) Translates to: ISPCGSPRIWALLLLPTLPLMYK*ASLMTS Trigger: AGAGGTCATCAAAGATGCCAACTTATACATCAGTGG...TAGTGTTGGGAGCAGCAGCAGGGCCCATATTCTGGGGCTCCCACAAGGGGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | CACCTTTTGTGTCTCTGGAGGGCCTGGCTCAGCCCAACATGTGGAACCTCTTCCAACCCTTTGCACTTGTaGGTGTTGAAATCACGAATC | + |
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Preference number: 5 (lower is better) Translates to: HLLCLWRAWLSPTCGTSSNPLHL*VLKSRI Trigger: GATTCGTGATTTCAACACCAACAAGTGCAAAGGGTT...GGAAGAGGTTCCACATGTTGGGCTGAGCCAGGCCCTCCAGAGACACAAAAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | GTGTGGGCACCATGCATGCAATGTGTGGACAGACGCTCAGGATGTCAGAGGAGTGACTTGCTATGGCCATaGCAGCTTCTTCATAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: VWAPCMQCVDRRSGCQRSDLLWP*QLLHSL Trigger: CAAACTATGAAGAAGCTGCAATGGCCATAGCAAGTC...ACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATGCATGGTGCCCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS TCA 90 bp | GCTGCAAACTTCACTGTGATGGGCTCGGAGGAACCTGGGGGTTTATaGCCATTGAAACTGGTAATTGCCTCTTCTGCTTCTGACCGTTTG | + |
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Preference number: 5 (lower is better) Translates to: AANFTVMGSEEPGGL*PLKLVIASSASDRL Trigger: CAAACGGTCAGAAGCAGAAGAGGCAATTACCAGTTTCAATGGTCATAAACCCCCAGGTTCCTCCGAGCCCATCACAGTGAAGTTTGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | GTCCAGAGTGACTGGTTAGTCAGCGCAGTCTACTTCGGTTTCACTTTAATATATCAGCCCGAGGAAGCATaGCCGGGGACATTGACACCA | + |
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Preference number: 5 (lower is better) Translates to: VQSDWLVSAVYFGFTLIYQPEEA*PGTLTP Trigger: TGGTGTCAATGTCCCCGGCAATGCTTCCTCGGGCTG...ATATATTAAAGTGAAACCGAAGTAGACTGCGCTGACTAACCAGTCACTCTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | CATGCAATGTGTGGACAGACGCTCAGGATGTCAGAGGAGTGGGGCATCTTCAGGAACCCTTTGCACTTGTaGGTGTTGAAATCACGAATC | + |
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Preference number: 5 (lower is better) Translates to: HAMCGQTLRMSEEWGIFRNPLHL*VLKSRI Trigger: GATTCGTGATTTCAACACCAACAAGTGCAAAGGGTT...CCTGAAGATGCCCCACTCCTCTGACATCCTGAGCGTCTGTCCACACATTGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | GTCCAGAGTGACTGGTTAGTCAGCGCAGTCTACTTCGGTTTCACTTTAATATATGACACCTTAATGGTTTaGGACTGGAGTCTCAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: VQSDWLVSAVYFGFTLIYDTLMV*DWSLKP Trigger: CGGCTTGAGACTCCAGTCCAAAACCATTAAGGTGTC...ATATATTAAAGTGAAACCGAAGTAGACTGCGCTGACTAACCAGTCACTCTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | GACTGCTGGGGAGGGCAAATTTCCTGTCACCTAAAGCAGAAATTGTTTAAAATATTGTTCTGGTTGGGATaGGCTGCAAACTTCACTGTG | + |
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Preference number: 5 (lower is better) Translates to: DCWGGQISCHLKQKLFKILFWLG*AANFTV Trigger: CACAGTGAAGTTTGCAGCCAATCCCAACCAGAACAA...TATTTTAAACAATTTCTGCTTTAGGTGACAGGAAATTTGCCCTCCCCAGCAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | GGATTTCAAGCATTTGAACATGTCGGTTGCATCCCAGAGTATAAAAACCTTTGCCGAATCACTTTCACATaGGTAACTGCACCAAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: GFQAFEHVGCIPEYKNLCRITFT*VTAPKG Trigger: CCCCTTTGGTGCAGTTACCAATGTGAAAGTGATTCG...GCAAAGGTTTTTATACTCTGGGATGCAACCGACATGTTCAAATGCTTGAAATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS-3UTR CAA 90 bp | GTCCAGAGTGACTGGTTAGTCAGCGCAGTCTACTTCGGTTTCACTTTAATATATCCACTGATGTATAAGTaGGCATCTTTGATGACCTCT | + |
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Preference number: 5 (lower is better) Translates to: VQSDWLVSAVYFGFTLIYPLMYK*ASLMTS Trigger: AGAGGTCATCAAAGATGCCAACTTATACATCAGTGG...ATATATTAAAGTGAAACCGAAGTAGACTGCGCTGACTAACCAGTCACTCTGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS TCA 72 bp | GGATCCCCTCATCGGCGTCTTGCCCAAGGTTGTAGATaGAGATGCACCAGCCCGAGGAAGCATTGCCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: GSPHRRLAQGCR*RCTSPRKHCRG Trigger: TCCCCGGCAATGCTTCCTCGGGCTGGTGCATCTTCATCTACAACCTTGGGCAAGACGCCGATGAGGGGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS CCA 72 bp | ACACCCATAGGGGAGAACCTGAATCTCTGTGCCTGGTaGTGTACAGGGCCTCCAAACCGCCTAGCAGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: TPIGENLNLCAW*CTGPPNRLAGE Trigger: CTCGCCTGCTAGGCGGTTTGGAGGCCCTGTACACCACCAGGCACAGAGATTCAGGTTCTCCCCTATGGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS CCA 72 bp | TCTACACCCATAGGGGAGAACCTGAATCTCTGTGCCTaGTGGTGTACAGGGCCTCCAAACCGCCTAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: STPIGENLNLCA*WCTGPPNRLAG Trigger: GCCTGCTAGGCGGTTTGGAGGCCCTGTACACCACCAGGCACAGAGATTCAGGTTCTCCCCTATGGGTGTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS CCA 72 bp | TGGTGTACAGGGCCTCCAAACCGCCTAGCAGGCGAGTaGTACAGCTGCGAGAGGAGAGCCATGTTTTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: WCTGPPNRLAGE*YSCERRAMFLF Trigger: GAACAAAAACATGGCTCTCCTCTCGCAGCTGTACCACTCGCCTGCTAGGCGGTTTGGAGGCCCTGTACACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS TCA 72 bp | AGATGCACCAGCCCGAGGAAGCATTGCCGGGGACATTaGCACCAGAAATCCCACTCATGTGATCTACACCCA | + |
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Preference number: 6 (lower is better) Translates to: RCTSPRKHCRGH*HQKSHSCDLHP Trigger: TGGGTGTAGATCACATGAGTGGGATTTCTGGTGTCAATGTCCCCGGCAATGCTTCCTCGGGCTGGTGCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS TCA 72 bp | TTGCCGGGGACATTGACACCAGAAATCCCACTCATGTaGTCTACACCCATAGGGGAGAACCTGAATCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LPGTLTPEIPLM*STPIGENLNLC Trigger: ACAGAGATTCAGGTTCTCCCCTATGGGTGTAGATCACATGAGTGGGATTTCTGGTGTCAATGTCCCCGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS CCA 72 bp | CTTGGGCGAGCATATGACACCTTAATGGTTTTGGACTaGAGTCTCAAGCCGTTCAGTGTGCTGATTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LGRAYDTLMVLD*SLKPFSVLIAL Trigger: GAGAGCAATCAGCACACTGAACGGCTTGAGACTCCAGTCCAAAACCATTAAGGTGTCATATGCTCGCCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS TCA 72 bp | TTCACTGTGATGGGCTCGGAGGAACCTGGGGGTTTATaGCCATTGAAACTGGTAATTGCCTCTTCTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FTVMGSEEPGGL*PLKLVIASSAS Trigger: AGAAGCAGAAGAGGCAATTACCAGTTTCAATGGTCATAAACCCCCAGGTTCCTCCGAGCCCATCACAGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS TCA 72 bp | TGGTTTTGGACTGGAGTCTCAAGCCGTTCAGTGTGCTaGTTGCTCTCTCTGCATCTTTTGCAGTCACATAGT | + |
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Preference number: 6 (lower is better) Translates to: WFWTGVSSRSVC*LLSLHLLQSHS Trigger: ACTATGTGACTGCAAAAGATGCAGAGAGAGCAATCAGCACACTGAACGGCTTGAGACTCCAGTCCAAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS GCA 72 bp | CAAGCTGTGTCCTGCTACTTTATCCCGAATAAGCTTTaGAGATTCAACCTCGCCAATGCTGCTGAACAGACT | + |
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Preference number: 6 (lower is better) Translates to: QAVSCYFIPNKL*RFNLANAAEQT Trigger: AGTCTGTTCAGCAGCATTGGCGAGGTTGAATCTGCAAAGCTTATTCGGGATAAAGTAGCAGGACACAGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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| CDS GCA 72 bp | TTTGGACTGGAGTCTCAAGCCGTTCAGTGTGCTGATTaGTCTCTCTGCATCTTTTGCAGTCACATAGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: FGLESQAVQCAD*SLCIFCSHIVH Trigger: GTGAACTATGTGACTGCAAAAGATGCAGAGAGAGCAATCAGCACACTGAACGGCTTGAGACTCCAGTCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098950.6 ENSMUST00000209010.2 |
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